ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf68h23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT829790.1| Oryza sativa (indica cultivar-group) cDNA clone:... 117 4e-23
2emb|CT829789.1| Oryza sativa (indica cultivar-group) cDNA clone:... 117 4e-23
3ref|NM_001050231.1| Oryza sativa (japonica cultivar-group) Os01g... 117 4e-23
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
5dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
6dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
7dbj|AK122159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
8dbj|AK063835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
9gb|DQ211622.1| Crimean-Congo hemorrhagic fever virus strain SPU4... 42 1.9
10gb|DQ211620.1| Crimean-Congo hemorrhagic fever virus strain SPU9... 42 1.9
11gb|DQ211615.1| Crimean-Congo hemorrhagic fever virus strain ArD3... 42 1.9
12gb|DQ211614.1| Crimean-Congo hemorrhagic fever virus strain ArD1... 42 1.9
13gb|DQ211613.1| Crimean-Congo hemorrhagic fever virus strain ArD8... 42 1.9
14gb|AY389361.2| Crimean-Congo hemorrhagic fever virus segment L, ... 42 1.9
15gb|AY422209.2| Crimean-Congo hemorrhagic fever virus strain IbAr... 42 1.9
16emb|AL109826.25|HSJ272H18 Human DNA sequence from clone RP1-272H... 42 1.9
17emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11... 42 1.9
18gb|AC116406.13| Mus musculus chromosome 3, clone RP23-427K12, co... 42 1.9
19gb|AY389508.2| Crimean-Congo hemorrhagic fever strain IbAr10200 ... 42 1.9
20gb|AY947891.1| Crimean-Congo hemorrhagic fever virus strain IbAr... 42 1.9
21dbj|AK240860.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 40 7.3
22ref|XM_001175859.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 7.3
23ref|XM_001176154.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 7.3
24ref|XM_775299.2| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.3
25ref|XM_001176080.1| PREDICTED: Strongylocentrotus purpuratus sim... 40 7.3
26ref|NM_001054665.1| Oryza sativa (japonica cultivar-group) Os02g... 40 7.3
27ref|XM_001211520.1| Aspergillus terreus NIH2624 T-complex protei... 40 7.3
28ref|XM_001143086.1| PREDICTED: Pan troglodytes similar to JM1 (L... 40 7.3
29emb|AL935164.7| Zebrafish DNA sequence from clone CH211-190N9 in... 40 7.3
30gb|DQ894170.1| Homo sapiens clone FLH168327.01L; RZPDo839F0591D ... 40 7.3
31gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s... 40 7.3
32dbj|AK226620.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 7.3
33ref|NM_001044529.1| Sus scrofa calpain 10 (CAPN10), mRNA >gi|109... 40 7.3
34gb|DQ647668.1| Sus scrofa calpain 10 transcript variant 2 mRNA, ... 40 7.3
35gb|AC184062.2| Populus trichocarpa clone Pop1-107J2, complete se... 40 7.3
36ref|XM_001106217.1| PREDICTED: Macaca mulatta similar to coiled-... 40 7.3
37gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 40 7.3
38ref|NM_105325.2| Arabidopsis thaliana heme binding / iron ion bi... 40 7.3
39gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, comp... 40 7.3
40gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11... 40 7.3
41dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.3
42gb|BC011675.2| Homo sapiens coiled-coil domain containing 22, mR... 40 7.3
43gb|BC000972.2| Homo sapiens coiled-coil domain containing 22, mR... 40 7.3
44gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, comp... 40 7.3
45gb|AC104036.8| Homo sapiens chromosome 8, clone RP11-665N23, com... 40 7.3
46gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, comp... 40 7.3
47emb|CR545470.5| Zebrafish DNA sequence from clone CH211-175E15 i... 40 7.3
48dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
49gb|AC067836.6| Homo sapiens chromosome 8, clone RP11-785H20, com... 40 7.3
50emb|AL022068.2|HS167F1 Human DNA sequence from clone RP1-167F1 o... 40 7.3
51gb|AC008286.11|AC008286 Drosophila melanogaster, chromosome 3R, ... 40 7.3
52gb|AC074025.1|AC074025 Arabidopsis thaliana chromosome 1 BAC F28... 40 7.3
53gb|AC034211.4|AC034211 Homo sapiens chromosome 5 clone CTC-556K2... 40 7.3
54dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.3
55emb|CR611380.1| full-length cDNA clone CS0DK006YM12 of HeLa cell... 40 7.3
56emb|CR598915.1| full-length cDNA clone CS0DL003YL15 of B cells (... 40 7.3
57gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, co... 40 7.3
58dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
59gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, co... 40 7.3
60gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complet... 40 7.3
61emb|AJ005890.1|HSA005890 Homo sapiens mRNA for JM1 protein, comp... 40 7.3
62gb|AY940097.1| Homo sapiens X-ray repair complementing defective... 40 7.3
63dbj|AP005358.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.3
64gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, co... 40 7.3
65ref|NM_014008.2| Homo sapiens coiled-coil domain containing 22 (... 40 7.3
66ref|NM_031013.1| Rattus norvegicus ATP-binding cassette, sub-fam... 40 7.3
67emb|AL591936.12| Mouse DNA sequence from clone RP23-28B10 on chr... 40 7.3
68gb|AC159374.2| Gallus gallus BAC clone CH261-5A10 from chromosom... 40 7.3
69emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chr... 40 7.3
70dbj|AB010466.1| Rattus norvegicus mRNA for multidrug resistance-... 40 7.3 
>emb|CT829790.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008G09, full
           insert sequence
          Length = 532
 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                       
Query: 276 tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
           |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 286 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 345

                                              
Query: 336 agaagctggagaagatccgggaggaggcactaggc 370
           |||||||||||||| |||||||| |||||||||||
Sbjct: 346 agaagctggagaagctccgggagaaggcactaggc 380
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>emb|CT829789.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030G19, full
           insert sequence
          Length = 530

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                       
Query: 276 tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
           |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 275 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 334

                                              
Query: 336 agaagctggagaagatccgggaggaggcactaggc 370
           |||||||||||||| |||||||| |||||||||||
Sbjct: 335 agaagctggagaagctccgggagaaggcactaggc 369
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>ref|NM_001050231.1| Oryza sativa (japonica cultivar-group) Os01g0644000 (Os01g0644000)
           mRNA, complete cds
          Length = 636

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                       
Query: 276 tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
           |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 289 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 348

                                              
Query: 336 agaagctggagaagatccgggaggaggcactaggc 370
           |||||||||||||| |||||||| |||||||||||
Sbjct: 349 agaagctggagaagctccgggagaaggcactaggc 383



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 acttgccttctacggcactaccac 36
          ||||| ||||||||||||||||||
Sbjct: 1  acttgtcttctacggcactaccac 24
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                            
Query: 276      tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
                |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 25921567 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 25921626

                                                   
Query: 336      agaagctggagaagatccgggaggaggcactaggc 370
                |||||||||||||| |||||||| |||||||||||
Sbjct: 25921627 agaagctggagaagctccgggagaaggcactaggc 25921661



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 11       gcacttgccttctacggcactaccac 36
                ||||||| ||||||||||||||||||
Sbjct: 25920076 gcacttgtcttctacggcactaccac 25920101
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>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                         
Query: 276   tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
             |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 17634 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 17693

                                                
Query: 336   agaagctggagaagatccgggaggaggcactaggc 370
             |||||||||||||| |||||||| |||||||||||
Sbjct: 17694 agaagctggagaagctccgggagaaggcactaggc 17728



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 11    gcacttgccttctacggcactaccac 36
             ||||||| ||||||||||||||||||
Sbjct: 16143 gcacttgtcttctacggcactaccac 16168
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510C12
          Length = 177049

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                          
Query: 276    tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
              |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 161491 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 161550

                                                 
Query: 336    agaagctggagaagatccgggaggaggcactaggc 370
              |||||||||||||| |||||||| |||||||||||
Sbjct: 161551 agaagctggagaagctccgggagaaggcactaggc 161585



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 11     gcacttgccttctacggcactaccac 36
              ||||||| ||||||||||||||||||
Sbjct: 160000 gcacttgtcttctacggcactaccac 160025
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>dbj|AK122159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147D17, full
           insert sequence
          Length = 569

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                       
Query: 276 tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
           |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 222 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 281

                                              
Query: 336 agaagctggagaagatccgggaggaggcactaggc 370
           |||||||||||||| |||||||| |||||||||||
Sbjct: 282 agaagctggagaagctccgggagaaggcactaggc 316
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>dbj|AK063835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B07, full
           insert sequence
          Length = 636

 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                       
Query: 276 tggtggctgaacgtgctgaagcaagaacctccagacaagagaacaagaggaaagtaatgg 335
           |||||||||  | ||| ||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 289 tggtggctggtcctgcagaagcaagaacctccaggcaagagaacaagagaaaagtaaggg 348

                                              
Query: 336 agaagctggagaagatccgggaggaggcactaggc 370
           |||||||||||||| |||||||| |||||||||||
Sbjct: 349 agaagctggagaagctccgggagaaggcactaggc 383



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 acttgccttctacggcactaccac 36
          ||||| ||||||||||||||||||
Sbjct: 1  acttgtcttctacggcactaccac 24
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>gb|DQ211622.1| Crimean-Congo hemorrhagic fever virus strain SPU415/85 segment L,
           complete sequence
          Length = 12157

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|DQ211620.1| Crimean-Congo hemorrhagic fever virus strain SPU97/85 segment L,
           complete sequence
          Length = 12157

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|DQ211615.1| Crimean-Congo hemorrhagic fever virus strain ArD39554 segment L,
           complete sequence
          Length = 12160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|DQ211614.1| Crimean-Congo hemorrhagic fever virus strain ArD15786 segment L,
           complete sequence
          Length = 12160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|DQ211613.1| Crimean-Congo hemorrhagic fever virus strain ArD8194 segment L,
           complete sequence
          Length = 12160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|AY389361.2| Crimean-Congo hemorrhagic fever virus segment L, complete sequence
          Length = 12108

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|AY422209.2| Crimean-Congo hemorrhagic fever virus strain IbAr10200 L protein
           gene, complete cds
          Length = 12122

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 701 cattgtccaagaagcaagcag 721
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>emb|AL109826.25|HSJ272H18 Human DNA sequence from clone RP1-272H18 on chromosome 20q12-13.12
             Contains an STS and GSSs, complete sequence
          Length = 50954

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    cttctctgcagctgccctctc 110
             |||||||||||||||||||||
Sbjct: 13337 cttctctgcagctgccctctc 13357
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>emb|AL023655.1|HS242N11 Human DNA sequence from clone RP1-242N11 on chromosome 6p22.3-23,
             complete sequence
          Length = 167514

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   tccactggcttactcctgcta 134
             |||||||||||||||||||||
Sbjct: 44480 tccactggcttactcctgcta 44500
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>gb|AC116406.13| Mus musculus chromosome 3, clone RP23-427K12, complete sequence
          Length = 175075

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   aaagtaatggagaagctggag 346
             |||||||||||||||||||||
Sbjct: 15915 aaagtaatggagaagctggag 15895
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>gb|AY389508.2| Crimean-Congo hemorrhagic fever strain IbAr10200 segment L,
           complete sequence
          Length = 12160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>gb|AY947891.1| Crimean-Congo hemorrhagic fever virus strain IbAr10200 segment L,
           complete sequence
          Length = 12160

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 cattgtccaagaagcaagcag 219
           |||||||||||||||||||||
Sbjct: 720 cattgtccaagaagcaagcag 740
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>dbj|AK240860.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065022M19, full
            insert sequence
          Length = 2443

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  tggagaagctggagaagatc 352
            ||||||||||||||||||||
Sbjct: 1179 tggagaagctggagaagatc 1160
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>ref|XM_001175859.1| PREDICTED: Strongylocentrotus purpuratus similar to polypyrimidine
            tract binding protein (LOC574897), mRNA
          Length = 7029

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  gagaagaaagagaacacgag 396
            ||||||||||||||||||||
Sbjct: 6003 gagaagaaagagaacacgag 5984
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>ref|XM_001176154.1| PREDICTED: Strongylocentrotus purpuratus similar to polypyrimidine
            tract binding protein (LOC574897), mRNA
          Length = 7480

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  gagaagaaagagaacacgag 396
            ||||||||||||||||||||
Sbjct: 6454 gagaagaaagagaacacgag 6435
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>ref|XM_775299.2| PREDICTED: Strongylocentrotus purpuratus similar to polypyrimidine
            tract binding protein (LOC574897), mRNA
          Length = 7029

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  gagaagaaagagaacacgag 396
            ||||||||||||||||||||
Sbjct: 6003 gagaagaaagagaacacgag 5984
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>ref|XM_001176080.1| PREDICTED: Strongylocentrotus purpuratus similar to polypyrimidine
            tract binding protein (LOC574897), mRNA
          Length = 7480

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  gagaagaaagagaacacgag 396
            ||||||||||||||||||||
Sbjct: 6454 gagaagaaagagaacacgag 6435
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>ref|NM_001054665.1| Oryza sativa (japonica cultivar-group) Os02g0750100 (Os02g0750100)
           mRNA, complete cds
          Length = 732

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 tggagaagctggagaagatc 352
           ||||||||||||||||||||
Sbjct: 254 tggagaagctggagaagatc 273
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>ref|XM_001211520.1| Aspergillus terreus NIH2624 T-complex protein 1 subunit alpha
           (ATEG_02342) mRNA, complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 agctggagaagatccgggag 358
           ||||||||||||||||||||
Sbjct: 845 agctggagaagatccgggag 864
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>ref|XM_001143086.1| PREDICTED: Pan troglodytes similar to JM1 (LOC740863), mRNA
          Length = 1150

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 ctggagaagatccgggagga 360
           ||||||||||||||||||||
Sbjct: 919 ctggagaagatccgggagga 938
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>emb|AL935164.7| Zebrafish DNA sequence from clone CH211-190N9 in linkage group 15,
            complete sequence
          Length = 170509

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 138  atggctgcacccgcacaaggccgc 161
            |||||||||| |||||||||||||
Sbjct: 1721 atggctgcactcgcacaaggccgc 1744
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>gb|DQ894170.1| Homo sapiens clone FLH168327.01L; RZPDo839F0591D EWSR1 mRNA, partial
            sequence
          Length = 1884

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1807 ctggagaagatccgggagga 1826
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>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 466      tcgttaatttttatgtttat 485
                ||||||||||||||||||||
Sbjct: 26221021 tcgttaatttttatgtttat 26221002
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>dbj|AK226620.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL07-28-K20
          Length = 2123

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 372  caaaggagaagaaagagaacacga 395
            ||||||||||||| ||||||||||
Sbjct: 1229 caaaggagaagaaggagaacacga 1252
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>ref|NM_001044529.1| Sus scrofa calpain 10 (CAPN10), mRNA
 gb|DQ647669.1| Sus scrofa calpain 10 transcript variant 1 mRNA, complete cds
          Length = 2387

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 tggagaagctggagaagatc 352
           ||||||||||||||||||||
Sbjct: 135 tggagaagctggagaagatc 116
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>gb|DQ647668.1| Sus scrofa calpain 10 transcript variant 2 mRNA, complete cds
          Length = 2277

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 tggagaagctggagaagatc 352
           ||||||||||||||||||||
Sbjct: 135 tggagaagctggagaagatc 116
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>gb|AC184062.2| Populus trichocarpa clone Pop1-107J2, complete sequence
          Length = 90108

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tcgtctgctttgtttgcaat 270
             ||||||||||||||||||||
Sbjct: 15060 tcgtctgctttgtttgcaat 15041
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>ref|XM_001106217.1| PREDICTED: Macaca mulatta similar to coiled-coil domain containing 22
            (LOC713063), mRNA
          Length = 2809

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1975 ctggagaagatccgggagga 1994
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>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 340     gctggagaagatccgggaggaggc 363
               ||||||||||| ||||||||||||
Sbjct: 2121084 gctggagaagagccgggaggaggc 2121107
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>ref|NM_105325.2| Arabidopsis thaliana heme binding / iron ion binding /
           monooxygenase/ oxygen binding (AT1G66540) mRNA, complete
           cds
          Length = 1623

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 372 caaaggagaagaaagagaacacga 395
           ||||||||||||| ||||||||||
Sbjct: 824 caaaggagaagaaggagaacacga 847
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>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence
          Length = 175712

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   aatggagaagctggagaaga 350
             ||||||||||||||||||||
Sbjct: 32373 aatggagaagctggagaaga 32392
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>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence
          Length = 140335

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ctggagaagatccgggagga 360
             ||||||||||||||||||||
Sbjct: 57143 ctggagaagatccgggagga 57162
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     agctggagaagatccgggag 358
               ||||||||||||||||||||
Sbjct: 1484402 agctggagaagatccgggag 1484421
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>gb|BC011675.2| Homo sapiens coiled-coil domain containing 22, mRNA (cDNA clone
            MGC:15381 IMAGE:4299954), complete cds
          Length = 2159

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1808 ctggagaagatccgggagga 1827
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>gb|BC000972.2| Homo sapiens coiled-coil domain containing 22, mRNA (cDNA clone
            MGC:5137 IMAGE:3449051), complete cds
          Length = 2280

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1924 ctggagaagatccgggagga 1943
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>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence
          Length = 170361

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   aatggagaagctggagaaga 350
             ||||||||||||||||||||
Sbjct: 37497 aatggagaagctggagaaga 37478
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>gb|AC104036.8| Homo sapiens chromosome 8, clone RP11-665N23, complete sequence
          Length = 183763

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    aaggagaagaaagagaacac 393
              ||||||||||||||||||||
Sbjct: 176578 aaggagaagaaagagaacac 176559
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>gb|AC094085.3| Homo sapiens chromosome 5 clone CTD-2110K23, complete sequence
          Length = 85977

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gacaagagaacaagaggaaa 328
             ||||||||||||||||||||
Sbjct: 77910 gacaagagaacaagaggaaa 77891
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>emb|CR545470.5| Zebrafish DNA sequence from clone CH211-175E15 in linkage group 15,
           complete sequence
          Length = 38647

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 138 atggctgcacccgcacaaggccgc 161
           |||||||||| |||||||||||||
Sbjct: 284 atggctgcactcgcacaaggccgc 261
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 333      tggagaagctggagaagatc 352
                ||||||||||||||||||||
Sbjct: 31545726 tggagaagctggagaagatc 31545745
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>gb|AC067836.6| Homo sapiens chromosome 8, clone RP11-785H20, complete sequence
          Length = 150453

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   aaggagaagaaagagaacac 393
             ||||||||||||||||||||
Sbjct: 21551 aaggagaagaaagagaacac 21532
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>emb|AL022068.2|HS167F1 Human DNA sequence from clone RP1-167F1 on chromosome 6p22.1-22.3
             Contains a keratin 18 (KRT18) (CK18,CYK18) pseudogene and
             a novel gene, complete sequence
          Length = 125055

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    cagctgccctctccgatcca 117
             ||||||||||||||||||||
Sbjct: 35702 cagctgccctctccgatcca 35683
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>gb|AC008286.11|AC008286 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone
             BACR22M06, complete sequence
          Length = 154003

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   tcgttaatttttatgtttat 485
             ||||||||||||||||||||
Sbjct: 96451 tcgttaatttttatgtttat 96432
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>gb|AC074025.1|AC074025 Arabidopsis thaliana chromosome 1 BAC F28G11 genomic sequence, complete
             sequence
          Length = 63773

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   caaaggagaagaaagagaacacga 395
             ||||||||||||| ||||||||||
Sbjct: 10301 caaaggagaagaaggagaacacga 10278
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>gb|AC034211.4|AC034211 Homo sapiens chromosome 5 clone CTC-556K20, complete sequence
          Length = 112902

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gacaagagaacaagaggaaa 328
             ||||||||||||||||||||
Sbjct: 16385 gacaagagaacaagaggaaa 16366
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 71      ggaacaacaatggccgtcac 90
               ||||||||||||||||||||
Sbjct: 4065835 ggaacaacaatggccgtcac 4065816
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>emb|CR611380.1| full-length cDNA clone CS0DK006YM12 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1745

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1447 ctggagaagatccgggagga 1466
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>emb|CR598915.1| full-length cDNA clone CS0DL003YL15 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1474

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1171 ctggagaagatccgggagga 1190
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>gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, complete sequence
          Length = 136002

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tctctgcagctgccctctcc 111
             ||||||||||||||||||||
Sbjct: 85192 tctctgcagctgccctctcc 85173
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>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0431B06
          Length = 154796

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   tggagaagctggagaagatc 352
             ||||||||||||||||||||
Sbjct: 36286 tggagaagctggagaagatc 36305
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>gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, complete sequence
          Length = 191894

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    aacgtgctgaagcaagaacc 304
              ||||||||||||||||||||
Sbjct: 107000 aacgtgctgaagcaagaacc 106981
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>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence
          Length = 248953

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 313    agagaacaagaggaaagtaatgga 336
              |||||||||||||||||| |||||
Sbjct: 141140 agagaacaagaggaaagttatgga 141163
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>emb|AJ005890.1|HSA005890 Homo sapiens mRNA for JM1 protein, complete CDS (clone
            LLNLc110M0111Q7 (RZPD Berlin)and LLNLc110K2140Q7 (RZPD
            Berlin))
          Length = 2228

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1893 ctggagaagatccgggagga 1912
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>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese
              hamster cells 4 (XRCC4) gene, complete cds
          Length = 279061

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gacaagagaacaagaggaaa 328
              ||||||||||||||||||||
Sbjct: 123204 gacaagagaacaagaggaaa 123185
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>dbj|AP005358.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1356F10, complete
              sequence
          Length = 159115

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    aaggagaagaaagagaacac 393
              ||||||||||||||||||||
Sbjct: 144109 aaggagaagaaagagaacac 144090
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>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence
          Length = 182865

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    ctcaaaggagaagaaagaga 389
              ||||||||||||||||||||
Sbjct: 137416 ctcaaaggagaagaaagaga 137435
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>ref|NM_014008.2| Homo sapiens coiled-coil domain containing 22 (CCDC22), mRNA
          Length = 2715

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ctggagaagatccgggagga 360
            ||||||||||||||||||||
Sbjct: 1963 ctggagaagatccgggagga 1982
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>ref|NM_031013.1| Rattus norvegicus ATP-binding cassette, sub-family C (CFTR/MRP),
            member 6 (Abcc6), mRNA
 gb|U73038.1|RNU73038 Rattus norvegicus liver multidrug resistance-associated protein 6
            (mrp6) mRNA, complete cds
          Length = 5775

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  tgtccaagaagcaagcagga 221
            ||||||||||||||||||||
Sbjct: 5700 tgtccaagaagcaagcagga 5681
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>emb|AL591936.12| Mouse DNA sequence from clone RP23-28B10 on chromosome 2, complete
              sequence
          Length = 147431

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    ttgtttgcaatgttcatggtggct 283
              |||| |||||||||||||||||||
Sbjct: 129143 ttgtctgcaatgttcatggtggct 129166
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>gb|AC159374.2| Gallus gallus BAC clone CH261-5A10 from chromosome unknown, complete
              sequence
          Length = 245547

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    agacaagagaacaagaggaa 327
              ||||||||||||||||||||
Sbjct: 209776 agacaagagaacaagaggaa 209795
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>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete
             sequence
          Length = 200480

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   gtaatggagaagctggagaa 348
             ||||||||||||||||||||
Sbjct: 85668 gtaatggagaagctggagaa 85649
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>dbj|AB010466.1| Rattus norvegicus mRNA for multidrug resistance-associated protein
            (MRP)-like protein-1 (MLP-1), complete cds
          Length = 5728

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  tgtccaagaagcaagcagga 221
            ||||||||||||||||||||
Sbjct: 5653 tgtccaagaagcaagcagga 5634


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 88,849,737
Number of extensions: 5056365
Number of successful extensions: 136496
Number of sequences better than 10.0: 70
Number of HSP's gapped: 136496
Number of HSP's successfully gapped: 75
Length of query: 503
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 481
Effective length of database: 18,508,616,841
Effective search space: 8902644700521
Effective search space used: 8902644700521
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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