| Clone Name | FLbaf65k01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067879.1| Oryza sativa (japonica cultivar-group) Os08g0242900 (Os08g0242900) mRNA, complete cds Length = 1599 Score = 1013 bits (511), Expect = 0.0 Identities = 922/1059 (87%) Strand = Plus / Plus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 166 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 225 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccgatccggtgtctattgcaagaaca 273 ||||| ||||||||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 226 ttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtatcgattgcgagaacg 285 Query: 274 tgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaattccgggaatcg 333 || |||||||| ||||| || || |||||||| ||| | || ||||| |||||||| || Sbjct: 286 tgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtct 345 Query: 334 accaatgatctgcggcaacgtatgcagtctgatatttcaagactggaagccaagatcgaa 393 |||||||||||||| || |||||||||||||||||||| ||| | ||||||||||| ||| Sbjct: 346 accaatgatctgcgtcagcgtatgcagtctgatatttctagattagaagccaagattgaa 405 Query: 394 agaatggatgcccaattggcagcaaaagatcgagagttggccactttgacccgaacggag 453 ||||||||||| ||||| || ||||||||||| ||| ||||||| ||||| |||||||| Sbjct: 406 agaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggag 465 Query: 454 gccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcgacgaa 513 ||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| || Sbjct: 466 gccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgag 525 Query: 514 tttcaaaaaatggttattggaaatcagcaagtacgcacccaacaaattcatgaaacgaag 573 || ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| Sbjct: 526 ttccaaaaaatggttattggcaatcagcaagtacgtacccagcaaattcatgaaatgaag 585 Query: 574 aagaaagaaaaggaatacatcaaattgcaggagaagctaaaccaagtactgatggagaag 633 || ||||| || |||||||||||||||||||||||| ||||||| ||| | |||||||| Sbjct: 586 aaaaaagagaaagaatacatcaaattgcaggagaagttaaaccaggtattaatggagaaa 645 Query: 634 aaaaaggaatcatcacgttcaggaatggaaataatgaacttgctgcagaaagagggacgg 693 || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 646 aagaaggaatcatcacgttcaggaatggaaataatgaacttgttgcagaaagaaggacgg 705 Query: 694 cagcgtggaacatggactggaaaaaagaatgacaatgactactacaaaatgattgttgat 753 ||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct: 706 cagcgtggaacttggagtggaaaaaagaatgacaatgattattacaaaatgattgttgat 765 Query: 754 gcatatgaagtgaagaagcaagaactagtccaggagaatgctgatttgcgggcactgtta 813 || ||||| || ||||||||||| | | || || |||||||||||||| ||||| || Sbjct: 766 gcctatgaggtaaagaagcaagagttgatgcaagaaaatgctgatttgcgagcactattg 825 Query: 814 cgttcaatggagatggatatgcgcaagttccttaatgctccaactggatcatcacaggct 873 ||||| ||| |||||||||||||| ||||||| |||||||||| |||| ||||| | Sbjct: 826 cgttcgatgcagatggatatgcgcgagttcctcaatgctccaaatggagttccacagcca 885 Query: 874 gttgttgctggtaatggaagacaggaggcagggtctccccagcccccacttgggggcaag 933 | ||||| || |||||| ||||||||||||| ||||| ||| | |||||||| |||||| Sbjct: 886 gctgttgtgggcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaag 945 Query: 934 acggatgtctttgacttgccctttcacatggccagagaccagatagaggagagtttgcgc 993 |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 946 acggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgc 1005 Query: 994 actaaaatggcttcagtaaaggcacgtatgacacaacttcaagatgctcaaaaagttgct 1053 |||||||||||||| ||||||| || |||||||||||||||||||| ||||| | ||| Sbjct: 1006 actaaaatggcttccataaaggcccgaatgacacaacttcaagatgcccaaaagggtgca 1065 Query: 1054 gaagtgacctcggaagttaccgagcgtgaacttgagcttgaagctcagttagttgaagcc 1113 |||||||| || |||| ||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 1066 gaagtgacatcagaagctaccgagcgggaacttgaacttgaagctcaactagttgaagct 1125 Query: 1114 agaagcatcatccaagagcaggcgtccatcatgtctaagcacttctccaagtctgataaa 1173 |||||||| ||||| |||||||| ||| ||||||| |||||||| | |||||||||||| Sbjct: 1126 agaagcattatccaggagcaggcatccctcatgtccaagcactttacgaagtctgataaa 1185 Query: 1174 ccaaggaggttaagtggcctggatgccgagcatgaggcg 1212 ||||||||||| ||||| ||||||| |||| ||||||| Sbjct: 1186 ccaaggaggttgagtggattggatgctgagcgtgaggcg 1224
>dbj|AK103204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122D05, full insert sequence Length = 1601 Score = 1005 bits (507), Expect = 0.0 Identities = 921/1059 (86%) Strand = Plus / Plus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 168 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 227 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccgatccggtgtctattgcaagaaca 273 ||||| ||||||||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 228 ttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtatcgattgcgagaacg 287 Query: 274 tgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaattccgggaatcg 333 || |||||||| ||||| || || |||||||| ||| | || ||||| |||||||| || Sbjct: 288 tgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtct 347 Query: 334 accaatgatctgcggcaacgtatgcagtctgatatttcaagactggaagccaagatcgaa 393 |||||||||||||| || |||||||||||||||||||| ||| | ||||||||||| ||| Sbjct: 348 accaatgatctgcgtcagcgtatgcagtctgatatttctagattagaagccaagattgaa 407 Query: 394 agaatggatgcccaattggcagcaaaagatcgagagttggccactttgacccgaacggag 453 ||||||||||| ||||| || ||||||||||| ||| ||||||| ||||| |||||||| Sbjct: 408 agaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggag 467 Query: 454 gccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcgacgaa 513 ||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| || Sbjct: 468 gccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgag 527 Query: 514 tttcaaaaaatggttattggaaatcagcaagtacgcacccaacaaattcatgaaacgaag 573 || ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| Sbjct: 528 ttccaaaaaatggttattggcaatcagcaagtacgtacccagcaaattcatgaaatgaag 587 Query: 574 aagaaagaaaaggaatacatcaaattgcaggagaagctaaaccaagtactgatggagaag 633 || ||||| || |||||||||||||||||||||||| ||||||| ||| | |||||||| Sbjct: 588 aaaaaagagaaagaatacatcaaattgcaggagaagttaaaccaggtattaatggagaaa 647 Query: 634 aaaaaggaatcatcacgttcaggaatggaaataatgaacttgctgcagaaagagggacgg 693 || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 648 aagaaggaatcatcacgttcaggaatggaaataatgaacttgttgcagaaagaaggacgg 707 Query: 694 cagcgtggaacatggactggaaaaaagaatgacaatgactactacaaaatgattgttgat 753 ||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct: 708 cagcgtggaacttggagtggaaaaaagaatgacaatgattattacaaaatgattgttgat 767 Query: 754 gcatatgaagtgaagaagcaagaactagtccaggagaatgctgatttgcgggcactgtta 813 || ||||| || ||||||||||| | | || || |||||||||||||| ||||| || Sbjct: 768 gcctatgaggtaaagaagcaagagttgatgcaagaaaatgctgatttgcgagcactattg 827 Query: 814 cgttcaatggagatggatatgcgcaagttccttaatgctccaactggatcatcacaggct 873 ||||| ||| |||||||||||||| ||||||| |||||||||| |||| |||| | Sbjct: 828 cgttcgatgcagatggatatgcgcgagttcctcaatgctccaaatggagttcaacagcca 887 Query: 874 gttgttgctggtaatggaagacaggaggcagggtctccccagcccccacttgggggcaag 933 | ||||| || |||||| ||||||||||||| ||||| ||| | |||||||| |||||| Sbjct: 888 gctgttgtgggcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaag 947 Query: 934 acggatgtctttgacttgccctttcacatggccagagaccagatagaggagagtttgcgc 993 |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 948 acggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgc 1007 Query: 994 actaaaatggcttcagtaaaggcacgtatgacacaacttcaagatgctcaaaaagttgct 1053 |||||||||||||| ||||||| || |||||||||||||||||||| ||||| | ||| Sbjct: 1008 actaaaatggcttccataaaggcccgaatgacacaacttcaagatgcccaaaagggtgca 1067 Query: 1054 gaagtgacctcggaagttaccgagcgtgaacttgagcttgaagctcagttagttgaagcc 1113 |||||||| || |||| ||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 1068 gaagtgacatcagaagctaccgagcgggaacttgaacttgaagctcaactagttgaagct 1127 Query: 1114 agaagcatcatccaagagcaggcgtccatcatgtctaagcacttctccaagtctgataaa 1173 |||||||| ||||| |||||||| ||| ||||||| |||||||| | |||||||||||| Sbjct: 1128 agaagcattatccaggagcaggcatccctcatgtccaagcactttacgaagtctgataaa 1187 Query: 1174 ccaaggaggttaagtggcctggatgccgagcatgaggcg 1212 ||||||||||| ||||| ||||||| |||| ||||||| Sbjct: 1188 ccaaggaggttgagtggattggatgctgagcgtgaggcg 1226
>dbj|AK060264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B09, full insert sequence Length = 1556 Score = 1005 bits (507), Expect = 0.0 Identities = 921/1059 (86%) Strand = Plus / Plus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 171 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 230 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccgatccggtgtctattgcaagaaca 273 ||||| ||||||||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 231 ttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtatcgattgcgagaacg 290 Query: 274 tgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaattccgggaatcg 333 || |||||||| ||||| || || |||||||| ||| | || ||||| |||||||| || Sbjct: 291 tgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtct 350 Query: 334 accaatgatctgcggcaacgtatgcagtctgatatttcaagactggaagccaagatcgaa 393 |||||||||||||| || |||||||||||||||||||| ||| | | ||||||||| ||| Sbjct: 351 accaatgatctgcgtcagcgtatgcagtctgatatttctagattagtagccaagattgaa 410 Query: 394 agaatggatgcccaattggcagcaaaagatcgagagttggccactttgacccgaacggag 453 ||||||||||| ||||| || ||||||||||| ||| ||||||| ||||| |||||||| Sbjct: 411 agaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggag 470 Query: 454 gccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcgacgaa 513 ||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| || Sbjct: 471 gccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgag 530 Query: 514 tttcaaaaaatggttattggaaatcagcaagtacgcacccaacaaattcatgaaacgaag 573 || ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| Sbjct: 531 ttccaaaaaatggttattggcaatcagcaagtacgtacccagcaaattcatgaaatgaag 590 Query: 574 aagaaagaaaaggaatacatcaaattgcaggagaagctaaaccaagtactgatggagaag 633 || ||||| || |||||||||||||||||||||||| ||||||| ||| | |||||||| Sbjct: 591 aaaaaagagaaagaatacatcaaattgcaggagaagttaaaccaggtattaatggagaaa 650 Query: 634 aaaaaggaatcatcacgttcaggaatggaaataatgaacttgctgcagaaagagggacgg 693 || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 651 aagaaggaatcatcacgttcaggaatggaaataatgaacttgttgcagaaagaaggacgg 710 Query: 694 cagcgtggaacatggactggaaaaaagaatgacaatgactactacaaaatgattgttgat 753 ||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct: 711 cagcgtggaacttggagtggaaaaaagaatgacaatgattattacaaaatgattgttgat 770 Query: 754 gcatatgaagtgaagaagcaagaactagtccaggagaatgctgatttgcgggcactgtta 813 || ||||| || ||||||||||| | | || || |||||||||||||| ||||| || Sbjct: 771 gcctatgaggtaaagaagcaagagttgatgcaagaaaatgctgatttgcgagcactattg 830 Query: 814 cgttcaatggagatggatatgcgcaagttccttaatgctccaactggatcatcacaggct 873 ||||| ||| |||||||||||||| ||||||| |||||||||| |||| ||||| | Sbjct: 831 cgttcgatgcagatggatatgcgcgagttcctcaatgctccaaatggagttccacagcca 890 Query: 874 gttgttgctggtaatggaagacaggaggcagggtctccccagcccccacttgggggcaag 933 | ||||| || |||||| ||||||||||||| ||||| ||| | |||||||| |||||| Sbjct: 891 gctgttgtgggcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaag 950 Query: 934 acggatgtctttgacttgccctttcacatggccagagaccagatagaggagagtttgcgc 993 |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 951 acggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgc 1010 Query: 994 actaaaatggcttcagtaaaggcacgtatgacacaacttcaagatgctcaaaaagttgct 1053 |||||||||||||| ||||||| || |||||||||||||||||||| ||||| | ||| Sbjct: 1011 actaaaatggcttccataaaggcccgaatgacacaacttcaagatgcccaaaagggtgca 1070 Query: 1054 gaagtgacctcggaagttaccgagcgtgaacttgagcttgaagctcagttagttgaagcc 1113 |||||||| || |||| ||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 1071 gaagtgacatcagaagctaccgagcgggaacttgaacttgaagctcaactagttgaagct 1130 Query: 1114 agaagcatcatccaagagcaggcgtccatcatgtctaagcacttctccaagtctgataaa 1173 |||||||| ||||| |||||||| ||| ||||||| |||||||| | |||||||||||| Sbjct: 1131 agaagcattatccaggagcaggcatccctcatgtccaagcactttacgaagtctgataaa 1190 Query: 1174 ccaaggaggttaagtggcctggatgccgagcatgaggcg 1212 ||||||||||| ||||| ||||||| |||| ||||||| Sbjct: 1191 ccaaggaggttgagtggattggatgctgagcgtgaggcg 1229
>gb|AY109135.1| Zea mays PCO079440 mRNA sequence Length = 1613 Score = 890 bits (449), Expect = 0.0 Identities = 871/1011 (86%), Gaps = 3/1011 (0%) Strand = Plus / Plus Query: 168 gaacctcgagcactgtgccaagtacctcaatcagacgctcgttaccttcggtttcccggc 227 |||||| |||||||| ||| |||||| || ||||||||||| |||||||| |||||||| Sbjct: 283 gaacctggagcactgcgcccggtacctgaaccagacgctcgtcaccttcggattcccggc 342 Query: 228 ctcgctcgacctattcgccaccgatccggtgtctattgcaagaacatgtaactgcatgta 287 || |||||||| ||||||||||||||||| || ||||||||||| ||||||||||| || Sbjct: 343 atctctcgacctcttcgccaccgatccggtctcgattgcaagaacttgtaactgcatcta 402 Query: 288 tgcactgctgcagcagcgccagagagacattgaattccgggaatcgaccaatgatctgcg 347 ||| |||||||||||||| ||||| |||||||| ||| |||| || || ||||| | ||| Sbjct: 403 tgcgctgctgcagcagcgacagagggacattgagttcagggagtctacaaatgaccagcg 462 Query: 348 gcaacgtatgcagtctgatatttcaagactggaagccaagatcgaaagaatggatgccca 407 ||| || ||||| |||||||| ||| | |||||||| ||||| || ||||||||||| || Sbjct: 463 gcagcggatgcaatctgatatctcacggctggaagctaagattgagagaatggatgctca 522 Query: 408 attggcagcaaaagatcgagagttggccactttgacccgaacggaggccaaaaacaccgc 467 ||| ||||| |||||||||||| | |||||| | || |||||||||||||||||||| || Sbjct: 523 attagcagcgaaagatcgagagctagccactcttactcgaacggaggccaaaaacactgc 582 Query: 468 agctctgaaagctcatattgagaagctgcagcaggaacgcgacgaatttcaaaaaatggt 527 |||||||| |||| ||||| |||||||| || ||||| || |||||||| |||||||| Sbjct: 583 tgctctgaagtctcagattgataagctgcaacaagaacgtgatgaatttcagaaaatggt 642 Query: 528 tattggaaatcagcaagtacgcacccaacaaattcatgaaacgaagaagaaagaaaagga 587 ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| || || Sbjct: 643 tataggaaatcagcaagtacgcacccagcaaattcatgaaatgaagaagaaagagaaaga 702 Query: 588 atacatcaaattgcaggagaagctaaaccaagtactgatggagaagaaaaaggaatcatc 647 |||||| || |||||||| |||||||| || ||| ||||||||||||||||||||||||| Sbjct: 703 atacataaagttgcaggaaaagctaaatcaggtattgatggagaagaaaaaggaatcatc 762 Query: 648 acgttcaggaatggaaataatgaacttgctgcagaaagagggacggcagcgtggaacatg 707 ||||| |||||||| |||||||||||| | |||||||| ||||| || || |||||||| Sbjct: 763 ccgttctggaatggagataatgaacttgttacagaaagaaggacgacaacgcggaacatg 822 Query: 708 gactggaaaaaagaatgacaatgactactacaaaatgattgttgatgcatatgaagtgaa 767 || |||||||||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct: 823 gaatggaaaaaagaacgacaatgattattacaaaatgattgttgatgcatatgaagtgaa 882 Query: 768 gaagcaagaactagtccaggagaatgctgatttgcgggcactgttacgttcaatggagat 827 ||| ||||| || | || |||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 883 gaaacaagagctgatgcaagagaatgcagatttacgggcactgttacgttcaatgcagat 942 Query: 828 ggatatgcgcaagttccttaatgctccaactggatcatcacaggctgttgttgctggtaa 887 ||| ||||| | || || ||||| || | ||| |||||||| || |||| ||| ||| Sbjct: 943 ggacatgcgtgactttctcaatgccccgaatgggtcatcacaatctactgttactgataa 1002 Query: 888 tggaagacaggaggcagggtctccccagcccccacttgggggcaagacggatgtctttga 947 ||||||||||||| |||||||||| ||| | || ||||| |||||||||||||| ||||| Sbjct: 1003 tggaagacaggagtcagggtctcctcagtctccgcttggtggcaagacggatgtttttga 1062 Query: 948 cttgccctttcacatggccagagaccagatagaggagagtttgcgcactaaaatggcttc 1007 |||||||||||| ||||||||||| |||||||| |||||||||||||| |||||| |||| Sbjct: 1063 cttgccctttcatatggccagagatcagatagaagagagtttgcgcacaaaaatgacttc 1122 Query: 1008 agtaaaggcacgtatgacacaacttcaagatgctcaaaaagttgctgaagtgacctcgga 1067 | | |||||||| ||||||||||||||||||||||| |||| ||| |||||||| || || Sbjct: 1123 aatcaaggcacgaatgacacaacttcaagatgctcagaaaggtgcagaagtgacttctga 1182 Query: 1068 agttaccgagcgtgaacttgagcttgaagctcagttagttgaagccagaagcatcatcca 1127 | || || || || ||||||||||||||||| | |||||||| |||||||||||||| Sbjct: 1183 ggcaactgaccgggagcttgagcttgaagctcaactggttgaagcaagaagcatcatcca 1242 Query: 1128 agagcaggcgtccatcatgtctaagcacttctccaagtctgataaaccaag 1178 ||||||||| | ||||||||| |||||||| |||||||||||| ||||| Sbjct: 1243 agagcaggcctgcatcatgtccaagcactt---caagtctgataagccaag 1290
>gb|BT017491.1| Zea mays clone EL01N0413D02.c mRNA sequence Length = 906 Score = 448 bits (226), Expect = e-122 Identities = 474/556 (85%), Gaps = 3/556 (0%) Strand = Plus / Minus Query: 623 tgatggagaagaaaaaggaatcatcacgttcaggaatggaaataatgaacttgctgcaga 682 ||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||| Sbjct: 900 tgatggagaagaaaaaggaatcatcccgttctggaatggagataatgaacttgttgcaga 841 Query: 683 aagagggacggcagcgtggaacatggactggaaaaaagaatgacaatgactactacaaaa 742 |||| ||||| || || |||||||||| |||||||||||| |||||||| || ||||||| Sbjct: 840 aagaaggacgacaacgcggaacatggaatggaaaaaagaacgacaatgattattacaaaa 781 Query: 743 tgattgttgatgcatatgaagtgaagaagcaagaactagtccaggagaatgctgatttgc 802 |||||||||||||||||||||| ||||| ||||| || | || |||||||| ||||| | Sbjct: 780 tgattgttgatgcatatgaagtaaagaaacaagagctgatgcaagagaatgcagatttac 721 Query: 803 gggcactgttacgttcaatggagatggatatgcgcaagttccttaatgctccaactggat 862 |||||||||||||||||||| ||||||| ||||| | || || ||||| || | ||| | Sbjct: 720 gggcactgttacgttcaatgcagatggacatgcgtgactttctcaatgccccgaatgggt 661 Query: 863 catcacaggctgttgttgctggtaatggaagacaggaggcagggtctccccagcccccac 922 ||||||| || |||| ||| |||||||||||||||| |||||||||| ||| | || | Sbjct: 660 catcacaatctactgttactgataatggaagacaggagtcagggtctcctcagtctccgc 601 Query: 923 ttgggggcaagacggatgtctttgacttgccctttcacatggccagagaccagatagagg 982 |||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | Sbjct: 600 ttggtggcaagacggatgtttttgacttgccctttcatatggccagagatcagatagaag 541 Query: 983 agagtttgcgcactaaaatggcttcagtaaaggcacgtatgacacaacttcaagatgctc 1042 ||||||| ||| | |||||| ||||| | |||||||| ||||| |||||||||||||||| Sbjct: 540 agagtttccgcccaaaaatgacttcaatcaaggcacgaatgacccaacttcaagatgctc 481 Query: 1043 aaaaagttgctgaagtgacctcggaagttaccgagcgtgaacttgagcttgaagctcagt 1102 | |||| ||| |||||||| || || || | || || ||||||||||||||||| Sbjct: 480 agaaaggtgcagaagtgacttctgagccaactgcccgggagcttgagcttgaagctcaac 421 Query: 1103 tagttgaagccagaagcatcatccaagagcaggcgtccatcatgtctaagcacttctcca 1162 | |||||| | ||||||||||||||||||||||| | ||||||||| |||||||| || Sbjct: 420 tggttgaaccaagaagcatcatccaagagcaggcctgcatcatgtccaagcactt---ca 364 Query: 1163 agtctgataaaccaag 1178 |||||||||| ||||| Sbjct: 363 agtctgataagccaag 348
>emb|CT828401.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004I21, full insert sequence Length = 583 Score = 396 bits (200), Expect = e-106 Identities = 365/420 (86%) Strand = Plus / Plus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 164 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 223 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccgatccggtgtctattgcaagaaca 273 ||||| ||||||||||||||||| || ||||||||||| || || || ||||| ||||| Sbjct: 224 ttcggcttcccggcctcgctcgatctcttcgccaccgaccccgtatcgattgcgagaacg 283 Query: 274 tgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaattccgggaatcg 333 || |||||||| ||||| || || |||||||| ||| | || ||||| |||||||| || Sbjct: 284 tgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgagttccgggagtct 343 Query: 334 accaatgatctgcggcaacgtatgcagtctgatatttcaagactggaagccaagatcgaa 393 |||||||||||||| || |||||||||||||||||||| ||| | ||||||||||| ||| Sbjct: 344 accaatgatctgcgtcagcgtatgcagtctgatatttctagattagaagccaagattgaa 403 Query: 394 agaatggatgcccaattggcagcaaaagatcgagagttggccactttgacccgaacggag 453 ||||||||||| ||||| || ||||||||||| ||| ||||||| ||||| |||||||| Sbjct: 404 agaatggatgctcaattagctgcaaaagatcgcgagctggccacattgactagaacggag 463 Query: 454 gccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcgacgaa 513 ||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| || Sbjct: 464 gccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcgatgag 523 Query: 514 tttcaaaaaatggttattggaaatcagcaagtacgcacccaacaaattcatgaaacgaag 573 || ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| Sbjct: 524 ttccaaaaaatggttattggcaatcagcaagtacgtacccagcaaattcatgaaatgaag 583
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 8679701 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 8679642 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccga 251 ||||| ||||||||||||||||| || ||||||||||| Sbjct: 8679641 ttcggcttcccggcctcgctcgatctcttcgccaccga 8679604 Score = 117 bits (59), Expect = 1e-22 Identities = 101/115 (87%) Strand = Plus / Minus Query: 1021 atgacacaacttcaagatgctcaaaaagttgctgaagtgacctcggaagttaccgagcgt 1080 |||||||||||||||||||| ||||| | ||| |||||||| || |||| ||||||||| Sbjct: 8676022 atgacacaacttcaagatgcccaaaagggtgcagaagtgacatcagaagctaccgagcgg 8675963 Query: 1081 gaacttgagcttgaagctcagttagttgaagccagaagcatcatccaagagcagg 1135 |||||||| ||||||||||| |||||||||| |||||||| ||||| ||||||| Sbjct: 8675962 gaacttgaacttgaagctcaactagttgaagctagaagcattatccaggagcagg 8675908 Score = 111 bits (56), Expect = 9e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 936 ggatgtctttgacttgccctttcacatggccagagaccagatagaggagagtttgcgcac 995 |||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 8676226 ggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgcac 8676167 Query: 996 taaaatggcttc 1007 |||||||||||| Sbjct: 8676166 taaaatggcttc 8676155 Score = 111 bits (56), Expect = 9e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 598 ttgcaggagaagctaaaccaagtactgatggagaagaaaaaggaatcatcacgttcagga 657 |||||||||||| ||||||| ||| | |||||||| || ||||||||||||||||||||| Sbjct: 8677181 ttgcaggagaagttaaaccaggtattaatggagaaaaagaaggaatcatcacgttcagga 8677122 Query: 658 atggaaataatgaacttgctgcag 681 |||||||||||||||||| ||||| Sbjct: 8677121 atggaaataatgaacttgttgcag 8677098 Score = 101 bits (51), Expect = 9e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 679 cagaaagagggacggcagcgtggaacatggactggaaaaaagaatgacaatgactactac 738 |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| || ||| Sbjct: 8677002 cagaaagaaggacggcagcgtggaacttggagtggaaaaaagaatgacaatgattattac 8676943 Query: 739 aaaatgattgt 749 ||||||||||| Sbjct: 8676942 aaaatgattgt 8676932 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 353 gtatgcagtctgatatttcaagactggaagccaagatcgaaagaatggatgcccaattgg 412 ||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||| | Sbjct: 8677713 gtatgcagtctgatatttctagattagaagccaagattgaaagaatggatgctcaattag 8677654 Query: 413 cagcaaaagatcgagagttggccactttgac 443 | ||||||||||| ||| ||||||| ||||| Sbjct: 8677653 ctgcaaaagatcgcgagctggccacattgac 8677623 Score = 93.7 bits (47), Expect = 2e-15 Identities = 80/91 (87%) Strand = Plus / Minus Query: 450 ggaggccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcga 509 ||||||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| Sbjct: 8677542 ggaggccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcga 8677483 Query: 510 cgaatttcaaaaaatggttattggaaatcag 540 || || ||||||||||||||||| |||||| Sbjct: 8677482 tgagttccaaaaaatggttattggcaatcag 8677452 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 539 agcaagtacgcacccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaat 598 |||||||||| ||||| ||||||||||||| |||||| ||||| || ||||||||||||| Sbjct: 8677320 agcaagtacgtacccagcaaattcatgaaatgaagaaaaaagagaaagaatacatcaaat 8677261 Query: 599 tgcagg 604 |||||| Sbjct: 8677260 tgcagg 8677255 Score = 75.8 bits (38), Expect = 5e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 824 agatggatatgcgcaagttccttaatgctccaactggatcatcacaggctgttgttgctg 883 |||||||||||||| ||||||| |||||||||| |||| ||||| | | ||||| | Sbjct: 8676513 agatggatatgcgcgagttcctcaatgctccaaatggagttccacagccagctgttgtgg 8676454 Query: 884 gtaatggaagacaggaggcagggtctccccagcccccacttgggggcaagacgg 937 | |||||| ||||||||||||| ||||| ||| | |||||||| |||||||||| Sbjct: 8676453 gcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaagacgg 8676400 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 262 attgcaagaacatgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaa 321 ||||| ||||| || |||||||| ||||| || || |||||||| ||| | || ||||| Sbjct: 8679169 attgcgagaacgtgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgag 8679110 Query: 322 ttccgggaatcgaccaatgatctgcg 347 |||||||| || |||||||||||||| Sbjct: 8679109 ttccgggagtctaccaatgatctgcg 8679084 Score = 50.1 bits (25), Expect = 0.028 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1131 gcaggcgtccatcatgtctaagcacttctccaagtctgataaaccaagg 1179 |||||| ||| ||||||| |||||||| | |||||||||||||||||| Sbjct: 8675765 gcaggcatccctcatgtccaagcactttacgaagtctgataaaccaagg 8675717
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 154 ttcgccgacgcagggaacctcgagcactgtgccaagtacctcaatcagacgctcgttacc 213 ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||||| ||| Sbjct: 22680 ttcgcggacgcggggaacctcgagcactgcgccaggtacctcaaccagacgctcgtcacc 22621 Query: 214 ttcggtttcccggcctcgctcgacctattcgccaccga 251 ||||| ||||||||||||||||| || ||||||||||| Sbjct: 22620 ttcggcttcccggcctcgctcgatctcttcgccaccga 22583 Score = 117 bits (59), Expect = 1e-22 Identities = 101/115 (87%) Strand = Plus / Minus Query: 1021 atgacacaacttcaagatgctcaaaaagttgctgaagtgacctcggaagttaccgagcgt 1080 |||||||||||||||||||| ||||| | ||| |||||||| || |||| ||||||||| Sbjct: 19001 atgacacaacttcaagatgcccaaaagggtgcagaagtgacatcagaagctaccgagcgg 18942 Query: 1081 gaacttgagcttgaagctcagttagttgaagccagaagcatcatccaagagcagg 1135 |||||||| ||||||||||| |||||||||| |||||||| ||||| ||||||| Sbjct: 18941 gaacttgaacttgaagctcaactagttgaagctagaagcattatccaggagcagg 18887 Score = 111 bits (56), Expect = 9e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 936 ggatgtctttgacttgccctttcacatggccagagaccagatagaggagagtttgcgcac 995 |||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 19205 ggatgtctttgatttgccctttcacatggctagagaccagattgaagagagtttgcgcac 19146 Query: 996 taaaatggcttc 1007 |||||||||||| Sbjct: 19145 taaaatggcttc 19134 Score = 111 bits (56), Expect = 9e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 598 ttgcaggagaagctaaaccaagtactgatggagaagaaaaaggaatcatcacgttcagga 657 |||||||||||| ||||||| ||| | |||||||| || ||||||||||||||||||||| Sbjct: 20160 ttgcaggagaagttaaaccaggtattaatggagaaaaagaaggaatcatcacgttcagga 20101 Query: 658 atggaaataatgaacttgctgcag 681 |||||||||||||||||| ||||| Sbjct: 20100 atggaaataatgaacttgttgcag 20077 Score = 101 bits (51), Expect = 9e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 679 cagaaagagggacggcagcgtggaacatggactggaaaaaagaatgacaatgactactac 738 |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| || ||| Sbjct: 19981 cagaaagaaggacggcagcgtggaacttggagtggaaaaaagaatgacaatgattattac 19922 Query: 739 aaaatgattgt 749 ||||||||||| Sbjct: 19921 aaaatgattgt 19911 Score = 101 bits (51), Expect = 9e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 353 gtatgcagtctgatatttcaagactggaagccaagatcgaaagaatggatgcccaattgg 412 ||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||| | Sbjct: 20692 gtatgcagtctgatatttctagattagaagccaagattgaaagaatggatgctcaattag 20633 Query: 413 cagcaaaagatcgagagttggccactttgac 443 | ||||||||||| ||| ||||||| ||||| Sbjct: 20632 ctgcaaaagatcgcgagctggccacattgac 20602 Score = 93.7 bits (47), Expect = 2e-15 Identities = 80/91 (87%) Strand = Plus / Minus Query: 450 ggaggccaaaaacaccgcagctctgaaagctcatattgagaagctgcagcaggaacgcga 509 ||||||||||||||| ||| || |||| ||||| ||||| |||||||| ||||||||||| Sbjct: 20521 ggaggccaaaaacactgcaactttgaaggctcagattgacaagctgcaacaggaacgcga 20462 Query: 510 cgaatttcaaaaaatggttattggaaatcag 540 || || ||||||||||||||||| |||||| Sbjct: 20461 tgagttccaaaaaatggttattggcaatcag 20431 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 539 agcaagtacgcacccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaat 598 |||||||||| ||||| ||||||||||||| |||||| ||||| || ||||||||||||| Sbjct: 20299 agcaagtacgtacccagcaaattcatgaaatgaagaaaaaagagaaagaatacatcaaat 20240 Query: 599 tgcagg 604 |||||| Sbjct: 20239 tgcagg 20234 Score = 75.8 bits (38), Expect = 5e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 824 agatggatatgcgcaagttccttaatgctccaactggatcatcacaggctgttgttgctg 883 |||||||||||||| ||||||| |||||||||| |||| ||||| | | ||||| | Sbjct: 19492 agatggatatgcgcgagttcctcaatgctccaaatggagttccacagccagctgttgtgg 19433 Query: 884 gtaatggaagacaggaggcagggtctccccagcccccacttgggggcaagacgg 937 | |||||| ||||||||||||| ||||| ||| | |||||||| |||||||||| Sbjct: 19432 gcaatggacgacaggaggcaggatctcctcagtctccacttggtggcaagacgg 19379 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 262 attgcaagaacatgtaactgcatgtatgcactgctgcagcagcgccagagagacattgaa 321 ||||| ||||| || |||||||| ||||| || || |||||||| ||| | || ||||| Sbjct: 22148 attgcgagaacgtgcaactgcatctatgctcttcttcagcagcggcagcgtgatattgag 22089 Query: 322 ttccgggaatcgaccaatgatctgcg 347 |||||||| || |||||||||||||| Sbjct: 22088 ttccgggagtctaccaatgatctgcg 22063 Score = 50.1 bits (25), Expect = 0.028 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1131 gcaggcgtccatcatgtctaagcacttctccaagtctgataaaccaagg 1179 |||||| ||| ||||||| |||||||| | |||||||||||||||||| Sbjct: 18744 gcaggcatccctcatgtccaagcactttacgaagtctgataaaccaagg 18696
>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence Length = 115452 Score = 81.8 bits (41), Expect = 8e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 1027 caacttcaagatgctcaaaaagttgctgaagtgacctcggaagttaccgagcgtgaactt 1086 ||||| ||||||||||| |||| || ||||| || ||||||| ||||||| | |||||| Sbjct: 80762 caactgcaagatgctcagaaagaggccgaagtcacttcggaagctaccgagagagaactt 80821 Query: 1087 gagcttgaagctcagttagttgaagccagaagcatcatccaagagcagg 1135 |||||||||||||| | |||||||| || ||||| || |||||||||| Sbjct: 80822 gagcttgaagctcaacttgttgaagcaaggagcattatacaagagcagg 80870 Score = 56.0 bits (28), Expect = 5e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 553 caacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcagg 604 |||||||| ||||| | ||||||||| |||||||||||||| || ||||||| Sbjct: 79024 caacaaatacatgagatgaagaagaaggaaaaggaatacattaagttgcagg 79075 Score = 46.1 bits (23), Expect = 0.44 Identities = 41/47 (87%) Strand = Plus / Plus Query: 598 ttgcaggagaagctaaaccaagtactgatggagaagaaaaaggaatc 644 |||||||||| ||||||||||| ||||||||||||| || ||||| Sbjct: 79219 ttgcaggagagactaaaccaagtgttgatggagaagaagaaagaatc 79265 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 457 aaaaacaccgcagctctgaaagctcatattgagaagctgca 497 ||||| || |||||||| || ||||| |||||||||||||| Sbjct: 78817 aaaaatactgcagctctcaaggctcaaattgagaagctgca 78857
>ref|NM_179650.1| Arabidopsis thaliana unknown protein (AT2G18876) mRNA, complete cds Length = 1496 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 589 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 648 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 649 ttaaaccaagtgttgatggagaaaaagaaggaa 681
>ref|NM_179651.1| Arabidopsis thaliana unknown protein (AT2G18876) mRNA, complete cds Length = 1681 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 774 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 833 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 834 ttaaaccaagtgttgatggagaaaaagaaggaa 866
>gb|BT005337.1| Arabidopsis thaliana At2g18870 mRNA, complete cds Length = 1149 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 478 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 537 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 538 ttaaaccaagtgttgatggagaaaaagaaggaa 570
>dbj|AK119090.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL21-44-B17 Length = 1497 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 589 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 648 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 649 ttaaaccaagtgttgatggagaaaaagaaggaa 681
>gb|BT002448.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1580 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 790 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 849 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 850 ttaaaccaagtgttgatggagaaaaagaaggaa 882
>emb|BX821015.1|CNS0A80E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH91ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1419 Score = 65.9 bits (33), Expect = 5e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 550 acccaacaaattcatgaaacgaagaagaaagaaaaggaatacatcaaattgcaggagaag 609 ||||||||| | |||||||| || ||||||||||| || ||||| || || ||||||| | Sbjct: 569 acccaacaattacatgaaacaaaaaagaaagaaaaagagtacataaagttacaggagagg 628 Query: 610 ctaaaccaagtactgatggagaagaaaaaggaa 642 |||||||||| |||||||||| || |||||| Sbjct: 629 ttaaaccaagtgttgatggagaaaaagaaggaa 661
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1708 catgacttataaaagtgaatggaggga 1734 |||||||||||||| |||||||||||| Sbjct: 2812079 catgacttataaaaatgaatggaggga 2812105
>emb|X56012.1|TAGSTA1 Wheat gstA1 gene for glutathione-S-transferase Length = 2178 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1718 aaaagtgaatggagggagtagtt 1740 ||||||||||||||||||||||| Sbjct: 148 aaaagtgaatggagggagtagtt 170
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 46.1 bits (23), Expect = 0.44 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1708 catgacttataaaagtgaatggaggga 1734 |||||||||||||| |||||||||||| Sbjct: 83924 catgacttataaaaatgaatggaggga 83950
>emb|AL928576.9| Mouse DNA sequence from clone RP23-343C17 on chromosome 2, complete sequence Length = 188169 Score = 46.1 bits (23), Expect = 0.44 Identities = 23/23 (100%) Strand = Plus / Minus Query: 565 gaaacgaagaagaaagaaaagga 587 ||||||||||||||||||||||| Sbjct: 80359 gaaacgaagaagaaagaaaagga 80337
>emb|CT828689.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA009J03, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1713 cttataaaagtgaatggagggagtag 1738 |||||| ||||||||||||||||||| Sbjct: 798 cttatagaagtgaatggagggagtag 773
>gb|AC146506.1| Solanum demissum chromosome 5 clone PGEC989P08, complete sequence Length = 121915 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1717 taaaagtgaatggagggagtag 1738 |||||||||||||||||||||| Sbjct: 28309 taaaagtgaatggagggagtag 28288
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1713 cttataaaagtgaatggagggagtag 1738 |||||| ||||||||||||||||||| Sbjct: 20934901 cttatagaagtgaatggagggagtag 20934876
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1713 cttataaaagtgaatggagggagtag 1738 |||||| ||||||||||||||||||| Sbjct: 58373 cttatagaagtgaatggagggagtag 58348
>emb|AL845282.12| Zebrafish DNA sequence from clone DKEY-28P18 in linkage group 21, complete sequence Length = 192865 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 624 gatggagaagaaaaaggaatca 645 |||||||||||||||||||||| Sbjct: 82093 gatggagaagaaaaaggaatca 82072
>gb|AC187717.2| Callithrix jacchus BAC clone CH259-86H12 from chromosome unknown, complete sequence Length = 221557 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 atgaaacgaagaagaaagaaa 583 ||||||||||||||||||||| Sbjct: 14307 atgaaacgaagaagaaagaaa 14327
>gb|AC174299.9| Medicago truncatula clone mth2-80e19, complete sequence Length = 129721 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 caagaacatgtaactgcatgt 286 ||||||||||||||||||||| Sbjct: 101468 caagaacatgtaactgcatgt 101488
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1658 tactccctctgttcacttctataag 1682 |||||||||||||||||| |||||| Sbjct: 103059 tactccctctgttcacttatataag 103035
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1658 tactccctctgttcacttctataag 1682 |||||||||||||||||| |||||| Sbjct: 7990 tactccctctgttcacttatataag 7966
>ref|XM_001090922.1| PREDICTED: Macaca mulatta similar to paired-like homeodomain transcription factor 2, transcript variant 1 (LOC699737), mRNA Length = 3311 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 624 gatggagaagaaaaaggaatc 644 ||||||||||||||||||||| Sbjct: 809 gatggagaagaaaaaggaatc 789
>gb|AC186395.2| Pan troglodytes BAC clone CH251-100K18 from chromosome unknown, complete sequence Length = 180539 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 69463 aaagtgaatggagggagtagt 69443
>gb|AC154033.1| Solanum demissum chromosome 5 clone PGEC132D05, complete sequence Length = 118497 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 taaaagtgaatggagggagta 1737 ||||||||||||||||||||| Sbjct: 35837 taaaagtgaatggagggagta 35857
>ref|XM_600317.2| PREDICTED: Bos taurus similar to KARP-1 binding protein 1 (LOC522044), mRNA Length = 7216 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 910 ccccagcccccacttgggggc 930 ||||||||||||||||||||| Sbjct: 1533 ccccagcccccacttgggggc 1513
>ref|XM_582184.2| PREDICTED: Bos taurus hypothetical LOC505831 (LOC505831), mRNA Length = 1854 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 564 tgaaacgaagaagaaagaaaaggaa 588 ||||| ||||||||||||||||||| Sbjct: 1167 tgaaaagaagaagaaagaaaaggaa 1191
>gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, complete sequence Length = 225763 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 108776 gaagtgaagaagcaggaactagtcc 108752
>gb|AC124450.3| Mus musculus BAC clone RP24-215C4 from chromosome 13, complete sequence Length = 157531 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaatacatcaaattgca 602 ||||||||||||||||||||| Sbjct: 50529 aaaggaatacatcaaattgca 50549
>dbj|AK153440.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830161O11 product:oncoprotein induced transcript 3, full insert sequence Length = 1960 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 997 gaagtgaagaagcaggaactagtcc 973
>gb|AF517107.1| Mus musculus EF-9 polyadenylation variant II mRNA, complete cds, alternatively spliced Length = 2537 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1574 gaagtgaagaagcaggaactagtcc 1550
>gb|AF517106.1| Mus musculus EF-9 polyadenylation variant I mRNA, complete cds, alternatively spliced Length = 2045 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1574 gaagtgaagaagcaggaactagtcc 1550
>ref|NM_010959.1| Mus musculus oncoprotein induced transcript 3 (Oit3), mRNA dbj|AK040570.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430107A04 product:ALC homolog [Homo sapiens], full insert sequence Length = 2717 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1756 gaagtgaagaagcaggaactagtcc 1732
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1087 gagcttgaagctcagttagtt 1107 ||||||||||||||||||||| Sbjct: 1260261 gagcttgaagctcagttagtt 1260241
>emb|AL954223.1| Pan troglodytes chromosome 22 clone PTB-187O16 map q21.2, complete sequence Length = 165877 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1742 ttgtggcaaactgttatatctcgtt 1766 |||||||||||||| |||||||||| Sbjct: 84361 ttgtggcaaactgtaatatctcgtt 84337
>dbj|AK050081.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730013M23 product:ALC homolog [Homo sapiens], full insert sequence Length = 2197 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1722 gaagtgaagaagcaggaactagtcc 1698
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 taaaagtgaatggagggagta 1737 ||||||||||||||||||||| Sbjct: 16393498 taaaagtgaatggagggagta 16393518
>dbj|AP000049.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 20/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 7221 aaagtgaatggagggagtagt 7241
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 997 aaaatggcttcagtaaaggca 1017 ||||||||||||||||||||| Sbjct: 54870 aaaatggcttcagtaaaggca 54890
>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein (CO1) gene, complete cds Length = 4071 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1713 cttataaaagtgaatggagggagta 1737 ||||||| ||||||||||||||||| Sbjct: 2925 cttataatagtgaatggagggagta 2901
>gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein (CO1) gene, complete cds Length = 2252 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1713 cttataaaagtgaatggagggagta 1737 ||||||| ||||||||||||||||| Sbjct: 1530 cttataatagtgaatggagggagta 1506
>gb|AC161035.2| Homo sapiens chromosome 2 clone WI2-1692P8, complete sequence Length = 10001 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1572 taaaaaagttaaatgatgtac 1592 ||||||||||||||||||||| Sbjct: 4586 taaaaaagttaaatgatgtac 4606 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1640 taaaaaagttaaatgatgtac 1660 ||||||||||||||||||||| Sbjct: 4586 taaaaaagttaaatgatgtac 4606
>gb|AY180915.1| Mus musculus LZP variant II (Lzp2) mRNA, complete cds Length = 2637 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1679 gaagtgaagaagcaggaactagtcc 1655
>gb|AF356506.1| Mus musculus LZP variant I mRNA, complete cds Length = 2238 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 760 gaagtgaagaagcaagaactagtcc 784 |||||||||||||| |||||||||| Sbjct: 1702 gaagtgaagaagcaggaactagtcc 1678
>gb|AC152886.11| Medicago truncatula clone mth2-84j21, complete sequence Length = 95367 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 caagaacatgtaactgcatgt 286 ||||||||||||||||||||| Sbjct: 10330 caagaacatgtaactgcatgt 10350
>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence Length = 182507 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 997 aaaatggcttcagtaaaggca 1017 ||||||||||||||||||||| Sbjct: 123081 aaaatggcttcagtaaaggca 123101
>gb|AC008275.3| Homo sapiens BAC clone RP11-294I11 from 2, complete sequence Length = 166504 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 623 tgatggagaagaaaaaggaat 643 ||||||||||||||||||||| Sbjct: 23688 tgatggagaagaaaaaggaat 23668
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 taaaagtgaatggagggagta 1737 ||||||||||||||||||||| Sbjct: 2816 taaaagtgaatggagggagta 2836
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 taaaagtgaatggagggagta 1737 ||||||||||||||||||||| Sbjct: 70061 taaaagtgaatggagggagta 70081
>dbj|BS000182.1| Pan troglodytes chromosome 22 clone:PTB-301D17, map 22, complete sequences Length = 163049 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 102652 aaagtgaatggagggagtagt 102672
>gb|AC158911.7| Mus musculus chromosome 5, clone RP24-363D4, complete sequence Length = 119381 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1549 agttaaatgatgtagtatttc 1569 ||||||||||||||||||||| Sbjct: 49758 agttaaatgatgtagtatttc 49778 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1617 agttaaatgatgtagtatttc 1637 ||||||||||||||||||||| Sbjct: 49758 agttaaatgatgtagtatttc 49778
>gb|AC015592.6|AC015592 Homo sapiens, clone RP11-44O2, complete sequence Length = 156961 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1564 tatttctataaaaaagttaaa 1584 ||||||||||||||||||||| Sbjct: 140399 tatttctataaaaaagttaaa 140419 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1632 tatttctataaaaaagttaaa 1652 ||||||||||||||||||||| Sbjct: 140399 tatttctataaaaaagttaaa 140419
>emb|BX322571.5| Zebrafish DNA sequence from clone DKEY-260A4 in linkage group 17, complete sequence Length = 58025 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1631 gtatttctataaaaaagttaaatga 1655 |||||||| |||||||||||||||| Sbjct: 28093 gtatttctttaaaaaagttaaatga 28069 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1563 gtatttctataaaaaagttaaatga 1587 |||||||| |||||||||||||||| Sbjct: 28093 gtatttctttaaaaaagttaaatga 28069
>emb|AJ234721.1|HVU234721 Hordeum vulgare genomic DNA fragment; clone MWG2031.uni Length = 205 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1658 tactccctctgttcacttctataag 1682 |||||||||||||||||| |||||| Sbjct: 180 tactccctctgttcacttttataag 204
>dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, section 61/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 324982 aaagtgaatggagggagtagt 325002
>dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1133J7, complete sequences Length = 168406 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1564 tatttctataaaaaagttaaa 1584 ||||||||||||||||||||| Sbjct: 52898 tatttctataaaaaagttaaa 52918 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1632 tatttctataaaaaagttaaa 1652 ||||||||||||||||||||| Sbjct: 52898 tatttctataaaaaagttaaa 52918
>emb|AL671894.20| Mouse DNA sequence from clone RP23-316M11 on chromosome 3, complete sequence Length = 194209 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 570 gaagaagaaagaaaaggaata 590 ||||||||||||||||||||| Sbjct: 62062 gaagaagaaagaaaaggaata 62042
>dbj|AP000192.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 19/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 43808 aaagtgaatggagggagtagt 43828
>dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:130N6, complete sequence Length = 125242 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 7221 aaagtgaatggagggagtagt 7241
>dbj|AP000116.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 19/20 Length = 100000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1719 aaagtgaatggagggagtagt 1739 ||||||||||||||||||||| Sbjct: 43808 aaagtgaatggagggagtagt 43828 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 340,369,142 Number of extensions: 18642619 Number of successful extensions: 427547 Number of sequences better than 10.0: 66 Number of HSP's gapped: 427539 Number of HSP's successfully gapped: 106 Length of query: 1785 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1762 Effective length of database: 18,503,978,556 Effective search space: 32604010215672 Effective search space used: 32604010215672 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)