ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf65i22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os01g66180:12001.t05979:unspliced-genomic cytochrome c, ... 70 8e-24
2LOC_Os05g34770:12005.t03070:unspliced-genomic cytochrome c, ... 81 1e-23
3LOC_Os03g22400:12003.t01991:unspliced-genomic sentrin-specif... 35 0.37
4LOC_Os05g22340:12005.t01895:unspliced-genomic retrotransposo... 33 0.78
5LOC_Os06g51029:12006.t04786:unspliced-genomic OsFtsH1 - Oryz... 34 0.96
6LOC_Os10g22960:12010.t01774:unspliced-genomic catalytic/ hyd... 34 1.3
7LOC_Os04g51950:12004.t04671:unspliced-genomic serine/threoni... 34 1.3
8LOC_Os04g44740:12004.t04012:unspliced-genomic transferase/ t... 27 1.4
9LOC_Os01g71540:12001.t06448:unspliced-genomic expressed protein 33 1.8
10LOC_Os04g51390:12004.t04616:unspliced-genomic apospory-assoc... 33 2.5
11LOC_Os02g22720:12002.t02059:unspliced-genomic retrotransposo... 33 2.5
12LOC_Os06g19540:12006.t01773:unspliced-genomic b-keto acyl re... 32 3.4
13LOC_Os01g52000:12001.t04628:unspliced-genomic retrotransposo... 32 3.4
14LOC_Os12g09990:12012.t00876:unspliced-genomic retrotransposo... 30 3.8
15LOC_Os11g16310:12011.t01411:unspliced-genomic expressed protein 32 4.7
16LOC_Os08g31670:12008.t02912:unspliced-genomic carbohydrate t... 32 4.7
17LOC_Os08g30850:12008.t02836:unspliced-genomic YDG/SRA domain... 32 4.7
18LOC_Os07g08960:12007.t00771:unspliced-genomic glycine-rich R... 32 4.7
19LOC_Os06g36510:12006.t03347:unspliced-genomic hypothetical p... 32 4.7
20LOC_Os05g50570:12005.t04489:unspliced-genomic serine carboxy... 32 4.7
21LOC_Os03g17470:12003.t01523:unspliced-genomic IN2-1 protein,... 32 4.7
22LOC_Os01g12680:12001.t01134:unspliced-genomic C4-dicarboxyla... 32 4.7
23LOC_Os08g11180:12008.t01000:unspliced-genomic retrotransposo... 25 5.7
24LOC_Os02g50840:12002.t04668:unspliced-genomic DNA binding pr... 31 6.5
25LOC_Os02g33620:12002.t03005:unspliced-genomic retrotransposo... 31 6.5
26LOC_Os02g24470:12002.t02144:unspliced-genomic hypothetical p... 31 6.5
27LOC_Os11g04190:12011.t00310:unspliced-genomic auxin efflux c... 28 8.1
28LOC_Os11g27650:12011.t02379:unspliced-genomic retrotransposo... 31 8.9
29LOC_Os10g14990:12010.t01167:unspliced-genomic retrotransposo... 31 8.9
30LOC_Os08g37640:12008.t03501:unspliced-genomic hypothetical p... 31 8.9
31LOC_Os08g29000:12008.t02655:unspliced-genomic retrotransposo... 31 8.9
32LOC_Os05g37020:12005.t03246:unspliced-genomic hypothetical p... 31 8.9
33LOC_Os04g37600:12004.t03330:unspliced-genomic phosphate carr... 31 8.9
34LOC_Os01g62480:12001.t05623:unspliced-genomic L-ascorbate ox... 31 8.9
35LOC_Os01g35390:12001.t03092:unspliced-genomic retrotransposo... 31 8.9
36LOC_Os01g16750:12001.t01524:unspliced-genomic disulfide oxid... 31 8.9

>LOC_Os01g66180:12001.t05979:unspliced-genomic cytochrome c, putative, expressed|
          Length = 2794
 Score = 70.3 bits (147), Expect(3) = 8e-24
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +3 / +3

                                                         
Query: 159  GPNLNGLVGRQSGQAENYSYSAANKNSGVMWSEDTLFEYLLAPKK 293
            GPNLNGL GRQSG A  +SY + +K   V+W E+TL++YLL PKK
Sbjct: 1281 GPNLNGLFGRQSGTAPGFSYPSGDKIVPVIWEENTLYDYLLTPKK 1415



 Score = 47.3 bits (97), Expect(3) = 8e-24
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = +3 / +1

                                               
Query: 75  GDATKGAKIFKTKCAQCHTVAAGGPHKQGPNLNGLV 182
           GDA  G KIF+TKCA CH V     HK G   N L+
Sbjct: 100 GDAAAGEKIFRTKCAYCHAVDKAAGHKHGEPPNHLM 207



 Score = 36.8 bits (74), Expect(3) = 8e-24
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3 / +2

                                    
Query: 309  KMVFAGLKKPAERRDLIAYLIQAT 380
            KM F GLK+P +R DLIAYL  AT
Sbjct: 2429 KMGFNGLKQPQDRADLIAYLKNAT 2500



 Score = 35.0 bits (70), Expect = 0.51
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2 / -3

                                
Query: 136 ATVWHCAHLVLKILAPLVASP 74
           +T W  AHLVLKI +P  ASP
Sbjct: 161 STAWQYAHLVLKIFSPAAASP 99



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>LOC_Os05g34770:12005.t03070:unspliced-genomic cytochrome c, putative, expressed|
          Length = 2409

 Score = 80.8 bits (170), Expect(2) = 1e-23
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +3 / +2

                                                         
Query: 159  GPNLNGLVGRQSGQAENYSYSAANKNSGVMWSEDTLFEYLLAPKK 293
            GPNLNGL GRQSG    YSYS ANKN  V+W E+TL++YLL PKK
Sbjct: 1022 GPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKK 1156



 Score = 52.4 bits (108), Expect(2) = 1e-23
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = +3 / +2

                                        
Query: 75  GDATKGAKIFKTKCAQCHTVAAGGPHKQG 161
           G+   G KIFKTKCAQCHTV  G  HKQG
Sbjct: 116 GNPKAGEKIFKTKCAQCHTVDKGAGHKQG 202



 Score = 39.1 bits (79), Expect(3) = 3e-11
 Identities = 18/29 (62%), Positives = 19/29 (65%)
 Frame = -2 / -2

                                         
Query: 379  VAWIK*AIRSRRSAGFLRPANTILVPLMY 293
            VA  +* IRS RS GF  P  TILVP MY
Sbjct: 1958 VASFR*EIRSARSCGFFNPGKTILVPGMY 1872



 Score = 36.3 bits (73), Expect(3) = 3e-11
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2 / -1

                                
Query: 136 ATVWHCAHLVLKILAPLVASP 74
           +TVWH AHLVLKI +P +  P
Sbjct: 177 STVWHWAHLVLKIFSPALGLP 115



 Score = 35.0 bits (70), Expect(3) = 3e-11
 Identities = 21/37 (56%), Positives = 21/37 (56%)
 Frame = -2 / -1

                                                 
Query: 292  FLGASRYSNSVSSDHITPEFLLAAEYE*FSAWPDWRP 182
            FLG SR S SV S  IT  FLLA E E*    PD  P
Sbjct: 1155 FLGLSR*S*SVFSSQITAMFLLAVE*E*PGVVPDCLP 1045



 Score = 56.5 bits (117), Expect = 2e-07
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3 / +1

                                                              
Query: 231  KNSGVMWSEDTLFEYLLAPKKYIKGTKMVFAGLKKPAERRDLIAYLIQAT 380
            ++S  ++ +D+  E +    +YI GTKMVF GLKKP ER DLI+YL +AT
Sbjct: 1810 RSSLAIFVQDSWTESVFLIMQYIPGTKMVFPGLKKPQERADLISYLKEAT 1959



 Score = 32.7 bits (65), Expect(2) = 0.021
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -1 / -1

                                                 
Query: 368  QVGDQVATLSGLLEAGKHHLGALDVLLGREQVLEQRV 258
            QVG++++TL  LL+  + HLG+ DVL   +  L   V
Sbjct: 1947 QVGNKISTLLWLLQPREDHLGSRDVLHNEKNRLSPAV 1837



 Score = 28.1 bits (55), Expect(2) = 0.021
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1 / -3

                                
Query: 158 LLVRAAGRDRVALRALGLEDL 96
           LLV  A  D VAL ALGLEDL
Sbjct: 199 LLVAGALVDGVALGALGLEDL 137



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>LOC_Os03g22400:12003.t01991:unspliced-genomic sentrin-specific protease 2, putative, expressed|
          Length = 4694

 Score = 35.4 bits (71), Expect = 0.37
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -2 / +3

                                 
Query: 73   VPLMMLFGGAWCWGNWGSGWK 11
            +PL++LFGG +C G +G GW+
Sbjct: 2601 IPLLLLFGGQYCVGLFG*GWE 2663



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>LOC_Os05g22340:12005.t01895:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6663

 Score = 33.1 bits (66), Expect(2) = 0.78
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -1 / -2

                                           
Query: 335  LLEAGKHHLGALDVLLGREQVLEQRVFRPHH 243
            ++EA ++H+G L +++   Q+LEQRV+   H
Sbjct: 1172 IIEAIENHVGLLQLIISTPQLLEQRVWHQIH 1080



 Score = 23.5 bits (45), Expect(2) = 0.78
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2 / -3

                                                
Query: 553  LPTIAVLSQKRSH*PNGGPASTSSKQQSHVSPEGFF 446
            +P+    S KRS   N  P+ ++  + S VSP  FF
Sbjct: 1657 VPSPMSTSSKRSAYVNP*PSFSTPSKSSIVSPISFF 1550



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>LOC_Os06g51029:12006.t04786:unspliced-genomic OsFtsH1 - Oryza sativa FtsH protease, homologue of AtFtsH1/5,|
            expressed
          Length = 7677

 Score = 34.1 bits (68), Expect = 0.96
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +3 / -2

                                     
Query: 18   PDPQFPQHQAPPKSIMSGTGDATKG 92
            P PQ PQH   P S  SG+  ATKG
Sbjct: 7208 PSPQHPQHPRWPSSSPSGSTSATKG 7134



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>LOC_Os10g22960:12010.t01774:unspliced-genomic catalytic/ hydrolase, putative, expressed|
          Length = 4189

 Score = 33.6 bits (67), Expect = 1.3
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +3 / -3

                                                                       
Query: 48  PPKSIMSGTGDATKGAKIFKTKCAQCHTVAAGGPHKQGPNLNGLVGRQSGQAENYSYSAA 227
           PPK   SGT  A   A   + K A C    A  P ++    +   G  +G ++ ++ + +
Sbjct: 413 PPKKTRSGTNGARPAAMSGRRKGAHCQVARAPKPWRRRTGWSAAAGGAAGGSQRWTTAPS 234

                 
Query: 228 NKNSGV 245
              + V
Sbjct: 233 GSGTAV 216



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>LOC_Os04g51950:12004.t04671:unspliced-genomic serine/threonine protein kinase, putative, expressed|
          Length = 4028

 Score = 33.6 bits (67), Expect = 1.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3 / +1

                                  
Query: 462  ETCDCCLLDVLAGPPFGQCERF 527
            + C CC + VL  PP G C  F
Sbjct: 3781 DACSCCFMPVLYNPPAGTCTNF 3846



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>LOC_Os04g44740:12004.t04012:unspliced-genomic transferase/ transferase, transferring glycosyl groups, putative,|
           expressed
          Length = 3616

 Score = 26.7 bits (52), Expect(2) = 1.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2 / +2

                                  
Query: 254 GRHAVRVPARAQEVHQGHQDGVC 322
           GR  V V A     HQG + G C
Sbjct: 230 GRRPVHVRAHGASCHQGERHGAC 298



 Score = 24.0 bits (46), Expect(2) = 1.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3 / +1

                          
Query: 432 QRWKRKKPSGETCDC 476
           +RW+R++  G  C C
Sbjct: 310 RRWRRRRRRGSHCHC 354



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>LOC_Os01g71540:12001.t06448:unspliced-genomic expressed protein|
          Length = 8230

 Score = 33.1 bits (66), Expect = 1.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2 / -2

                                              
Query: 502  GPASTSSKQQSHVSPEGFFRFQRWKGCLWVCSIY 401
            G ++ + +Q  HV+ E F  F  WK  +WV +++
Sbjct: 2151 G*STMAEQQLDHVNREPFSSFMEWKNSIWVNAVW 2050



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>LOC_Os04g51390:12004.t04616:unspliced-genomic apospory-associated protein C, putative, expressed|
          Length = 5166

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2 / +3

                                              
Query: 469  HVSPEGFFRFQRWKGCLWVCSIYSEVLLGSVAWI 368
            H   E + R Q WK  + +C  +  +LL    W+
Sbjct: 2832 HFQYETYLRLQNWKSGVLLCKTFGGILLNFTCWV 2933



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>LOC_Os02g22720:12002.t02059:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5367

 Score = 32.7 bits (65), Expect = 2.5
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -1 / -3

                                         
Query: 332 LEAGKHHLGALDVLLGREQVLEQRVFRPHH 243
           +EA ++H+G L +++   Q+LEQRV+   H
Sbjct: 283 IEAIENHVGLLQLIISTSQLLEQRVWHQIH 194



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>LOC_Os06g19540:12006.t01773:unspliced-genomic b-keto acyl reductase, putative, expressed|
          Length = 1990

 Score = 32.2 bits (64), Expect = 3.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1 / -3

                                   
Query: 584 CWRRELPCPLPPNDCRSLPKAFAL 513
           C R+ LPCP PP+    LP   +L
Sbjct: 503 C*RQRLPCPAPPSPATPLPSPLSL 432



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>LOC_Os01g52000:12001.t04628:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4302

 Score = 32.2 bits (64), Expect = 3.4
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3 / +2

                                                           
Query: 423 HPFQRWKRKKPSGETCDCCLLDVLAGPPFGQCERFWERTAIVGRKRAG 566
           H  ++W  ++P+   C    L +   PP G+C        +  R+ AG
Sbjct: 551 HLRRQWVDRRPTRSACGRRRLPLAGSPPMGRCSSLKRSGKLTSRRTAG 694



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>LOC_Os12g09990:12012.t00876:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5382

 Score = 29.9 bits (59), Expect(2) = 3.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2 / -2

                      
Query: 46  AWCWGNWGSGW 14
           AWCW  W SGW
Sbjct: 557 AWCWCLWPSGW 525



 Score = 24.0 bits (46), Expect(2) = 3.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2 / -1

                                  
Query: 385  GSVAWIK*AIRSRRSAGFLRPA 320
            G   W    +R RRS G  RP+
Sbjct: 1641 GIAPWCAKNVRGRRSKGLFRPS 1576



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>LOC_Os11g16310:12011.t01411:unspliced-genomic expressed protein|
          Length = 4691

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3 / -3

                            
Query: 309  WCP*CTSWARAGTRTA 262
            WCP C SW +AGT  A
Sbjct: 3546 WCPACCSWGQAGTPPA 3499



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>LOC_Os08g31670:12008.t02912:unspliced-genomic carbohydrate transporter/ sugar porter/ transporter, putative,|
          expressed
          Length = 2840

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -2 / +2

                           
Query: 52 GGAWCWGNWGSGWKFQT 2
          GG WCW  W   W   T
Sbjct: 17 GGRWCWSTWRPSWSAPT 67



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>LOC_Os08g30850:12008.t02836:unspliced-genomic YDG/SRA domain containing protein, expressed|
          Length = 3306

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3 / +1

                                                    
Query: 69  GTGDATKGAKIFKTKCAQCHTVAAGGPHKQGPNLNGLVGRQ 191
           G GDA  GA    ++C +    AAGG  + G  + G  G +
Sbjct: 187 GGGDARAGAAALPSRCPRRPVAAAGGRGEGGDRMRGRGGEE 309



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>LOC_Os07g08960:12007.t00771:unspliced-genomic glycine-rich RNA-binding protein 7, putative, expressed|
          Length = 3826

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2 / +3

                                 
Query: 248 VVGRHAVRVPARAQEVHQGHQD 313
           VVG H     AR Q V QGH+D
Sbjct: 300 VVGHHGAHARARLQRVRQGHRD 365



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>LOC_Os06g36510:12006.t03347:unspliced-genomic hypothetical protein|
          Length = 2369

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2 / +2

                                 
Query: 82  ASPVPLMMLFGGAWCWGNWGSG 17
           A+P P +M  GG W WG  G G
Sbjct: 113 ATPPPCVMWTGGRWGWGRLGRG 178



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>LOC_Os05g50570:12005.t04489:unspliced-genomic serine carboxypeptidase-like precursor, putative, expressed|
          Length = 1561

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -1 / -2

                                                  
Query: 581  WRRELPCPLPPNDCRSLPKAFALTKRWACQHVQQTTIA 468
            WRR +PC  P       P+A   T R A +H  Q + A
Sbjct: 1446 WRRTIPCRTPNPRSSPAPRALEKTARSAPRHTPQRSRA 1333



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>LOC_Os03g17470:12003.t01523:unspliced-genomic IN2-1 protein, putative, expressed|
          Length = 2826

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3 / -3

                                                 
Query: 9   NFQPDPQFPQHQAPPKSIMSGTGDATKGAKIFKTKCAQ 122
           N++P PQ  +    P S    T  A KG+   +T CA+
Sbjct: 745 NYEPSPQIKEQHVIPCSSWQSTRAARKGSGTQRTTCAR 632



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>LOC_Os01g12680:12001.t01134:unspliced-genomic C4-dicarboxylate transporter/malic acid transport protein, expressed|
          Length = 6106

 Score = 31.8 bits (63), Expect = 4.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3 / -1

                                 
Query: 324  RQTPSWCP*CTSWARAGTRTA 262
            R TP+WCP  T W  AG R A
Sbjct: 3490 RGTPAWCPGRTPWR*AGRRRA 3428



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>LOC_Os08g11180:12008.t01000:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5761

 Score = 24.9 bits (48), Expect(2) = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1 / -3

                          
Query: 515  LTKRWACQHVQQTT 474
            L +RW CQ VQ++T
Sbjct: 4706 LFRRWLCQDVQKST 4665



 Score = 23.5 bits (45), Expect(2) = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1 / -2

                              
Query: 581  WRRELPCPLPPNDCRSLP 528
            W+R +P   PP+ CR  P
Sbjct: 4779 WQRRVPPL*PPS*CRGQP 4726



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>LOC_Os02g50840:12002.t04668:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 7201

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2 / +2

                                             
Query: 442  FQRWKGCLWVCSIYSEVLLGSVAWIK*AIRSRR 344
            F  W+ CL +  +Y   +LGS+  I  AI+ RR
Sbjct: 2660 FVHWRNCLLILLLYKVAVLGSLLIICEAIKIRR 2758



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>LOC_Os02g33620:12002.t03005:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5036

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2 / -1

                       
Query: 52   GGAWCWGNWGS 20
            GG WCW  WGS
Sbjct: 3266 GGCWCWSAWGS 3234



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>LOC_Os02g24470:12002.t02144:unspliced-genomic hypothetical protein|
          Length = 474

 Score = 31.3 bits (62), Expect = 6.5
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = +2 / -3

                                                          
Query: 257 RHAVRVPARAQEVHQGHQDGVCRPQEAR*ASRPDRLLDPGD*PEQHL 397
           RHA+R P R  EVH   Q   C    A  AS   R L P   P   L
Sbjct: 418 RHALRFPRRPPEVHPRRQQWRCCHCSASAASPVRRPLSPPPLPAPEL 278



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>LOC_Os11g04190:12011.t00310:unspliced-genomic auxin efflux carrier component 1b, putative, expressed|
          Length = 3300

 Score = 27.6 bits (54), Expect(2) = 8.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2 / +2

                                
Query: 127  WHCAHLVLKILAPLVASPVP 68
            WHC+H  L +  PL+  P P
Sbjct: 2198 WHCSHGSLPVGTPLLRMPWP 2257



 Score = 24.4 bits (47), Expect(2) = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3 / +2

                             
Query: 312 SWCP*CTSWARAGTRTAC 259
           SWC    S A +GTR+ C
Sbjct: 626 SWCRSSCSSASSGTRSCC 679



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>LOC_Os11g27650:12011.t02379:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 3909

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1 / -2

                                       
Query: 587 LCWRRELPCPLPPNDCRSLPKAFALTKR 504
           LC   EL CP  P D  S  +AF+ T R
Sbjct: 623 LCTTLELDCPPSPLDAASFSRAFSSTSR 540



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>LOC_Os10g14990:12010.t01167:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2363

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1 / -1

                                          
Query: 332  LEAGKHHLGALDVLLGREQVLEQRVFRPHH 243
            +EA ++H+G L +++   Q LEQRV+   H
Sbjct: 1964 IEAIENHVGLLQLIISTPQPLEQRVWHQIH 1875



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>LOC_Os08g37640:12008.t03501:unspliced-genomic hypothetical protein|
          Length = 465

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/42 (21%), Positives = 17/42 (40%)
 Frame = +3 / +2

                                                     
Query: 411 HTHRHPFQRWKRKKPSGETCDCCLLDVLAGPPFGQCERFWER 536
           H +  P  +W +++P G  C    +     PP       W++
Sbjct: 98  HPYAQPHYKWYKQEPDGTACKSSTVSTSGLPPTAHTTTSWQQ 223



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>LOC_Os08g29000:12008.t02655:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 5677

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1 / -1

                                       
Query: 587 LCWRRELPCPLPPNDCRSLPKAFALTKR 504
           LC    L CPL P D  S  +AF+ T R
Sbjct: 562 LCTTLALDCPLSPLDTTSFSRAFSSTSR 479



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>LOC_Os05g37020:12005.t03246:unspliced-genomic hypothetical protein|
          Length = 1439

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3 / -3

                                                       
Query: 33  PQHQAPPKSIMSGTGDATKGAKIFKTKCAQCHTVAAGGPHKQGP 164
           P+H A    +  G+  AT+G  +  T   +  T  +GGP   GP
Sbjct: 648 PRHSAVRSQVAEGSLAATRG*SLPSTSALEGTTYHSGGPFCAGP 517



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>LOC_Os04g37600:12004.t03330:unspliced-genomic phosphate carrier protein, mitochondrial precursor, putative,|
            expressed
          Length = 4966

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2 / -3

                              
Query: 67   LMMLFGGAWCWGNWGSGW 14
            L +LF   WCW N  S W
Sbjct: 4472 LQLLFTNGWCWSNSTSSW 4419



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>LOC_Os01g62480:12001.t05623:unspliced-genomic L-ascorbate oxidase precursor, putative, expressed|
          Length = 2987

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1 / -2

                                  
Query: 560  PLPPNDCRSLPKAFALTKRWAC 495
            P PP  C + P A++ + RW C
Sbjct: 2350 PAPPTCCTAAPAAWSRSSRWCC 2285



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>LOC_Os01g35390:12001.t03092:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3733

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3 / -3

                              
Query: 417  HRHPFQRWKRKKPSGETC 470
            +RH  Q+W RK P+G+ C
Sbjct: 2786 YRHQTQQWARKNPAGKLC 2733



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>LOC_Os01g16750:12001.t01524:unspliced-genomic disulfide oxidoreductase/ monooxygenase/ oxidoreductase, putative|
          Length = 2118

 Score = 30.9 bits (61), Expect = 8.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3 / +2

                                
Query: 324 RQTPSWCP*CTSWARAGTRTA 262
           R T  WCP C +W R+  R++
Sbjct: 452 RTTRGWCPRCPAWTRSPARSS 514


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 205,367,718
Number of extensions: 3016173
Number of successful extensions: 17910
Number of sequences better than 10.0: 36
Length of query: 211
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 163
Effective length of database: 52,912,542
Effective search space: 8624744346
Effective search space used: 8624744346
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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