ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf65i21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066184.1| Oryza sativa (japonica cultivar-group) Os07g0484300 (Os07g0484300) mRNA, complete cds Length = 2214 Score = 989 bits (499), Expect = 0.0 Identities = 880/1007 (87%) Strand = Plus / Plus Query: 199 gtgctgcgatcgcacgtgaccgttgcgctcttagcgaatctggcggcacacgtgttcctc 258 |||||| | |||||||||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 353 gtgctgggctcgcacgtgaccgtcgcgctcctggcgaatctggcggcgcacgtgttcctc 412 Query: 259 gtcctcgtcctagctcttaagacattagtttttgttcggttaactcctacagagactaga 318 |||||| |||| | || |||||| || ||||||||| ||||| || | ||||||||| Sbjct: 413 gtcctcatcctctccctcaagacactattttttgttcaattaacctcttctgagactaga 472 Query: 319 aaagtgttggaacacatcattaactatgtaatctacaagggaacttttctcacattggtt 378 || |||||||||||||||||||||||||| | |||||||||||||||||| || ||||| Sbjct: 473 aaggtgttggaacacatcattaactatgtgctttacaagggaacttttctcccactggtt 532 Query: 379 gtgcctcctaattctcaacaaataatcctttggtcaacttggctggtccttctttgttca 438 ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 533 gtgcctcctaattctcaacaaataatcctttggtcaagttggttgggccttctttgttcc 592 Query: 439 ctgaagatgtttcaatcattggccagagagcggcttgagtgcctccatgcgtcaccctca 498 ||||||||||||||||||||||| ||||| || ||||| ||| |||| ||||| ||| Sbjct: 593 ctgaagatgtttcaatcattggctagagaacgccttgaacagctcaatgcttcaccatca 652 Query: 499 gcaactccatcgaaatatctccgtgtatattctgcattgttgctggttctttcaactgat 558 || |||||||| ||||| | ||||||||||||||| | ||||||||||| || ||||| Sbjct: 653 gcgactccatcaaaatactttcgtgtatattctgcactattgctggttctatcggctgat 712 Query: 559 ctactatggatgaagctttgtgtagggttctgcagttcatgcaattctaagttattttgg 618 |||||||||| ||||||||||| |||||||||| || || |||||| | |||||||| Sbjct: 713 gtactatggataaagctttgtgttgggttctgcaagtcgtgtaattctcaactattttgg 772 Query: 619 cttatgttatttgagccacttagtattgcctttgagtcactgcagtctatcatggtgcat 678 |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct: 773 cttatgttttttgagccacttagtattggctttgagacactgcagtcaatcatggtgcat 832 Query: 679 ggatttcagttgtttgacatttggcagcgacatctgatggacagcggtgtggactatctt 738 |||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||| Sbjct: 833 ggatttcagttgtttgacatatggcaacgacatcaaatggacagtggtgtggactatctt 892 Query: 739 gatttccaaaaaacttataaacaagcagcaggttcattttctgaatggagaggccaactt 798 |||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||| Sbjct: 893 gatttccaaaaaacttataagcaagcagcaggatctttttctgagtggagaggcagacta 952 Query: 799 ataaggaattttggttttgccattgacctgataagcttgttgatgtcacttggtcattat 858 | || ||||||||||||| ||||||| |||||||||| |||||||||||||||||||| Sbjct: 953 gtcagaaattttggttttgtcattgacttgataagcttattgatgtcacttggtcattac 1012 Query: 859 tcgatgatcttttggctccgtggtatggcgtttcacctggtcgacgcagtcctcctgttg 918 || |||||||| ||||||||||||||||||||||| ||||| ||||| || ||||| ||| Sbjct: 1013 tcaatgatcttctggctccgtggtatggcgtttcatctggttgacgctgttctcctattg 1072 Query: 919 aacttgcgtgctcttgtagtttcatttttgaagagaattaagacctacattaagttaaga 978 |||||||| |||||| ||| |||||||| |||| | || || || || |||||| || Sbjct: 1073 aacttgcgcgctcttatagcttcattttggaagcggataaaaacttatgccaagttacga 1132 Query: 979 aaggcactccgttcgctcgatggagcactccctgatgctacatacgatgaaatctgcaca 1038 |||||||| |||| ||||| |||||||| || ||||||||||| ||||||||||| || Sbjct: 1133 aaggcacttagttcactcgacggagcacttccagatgctacatatgatgaaatctgtgca 1192 Query: 1039 tacgatgatgagtgtgccatctgccggggaccaatggctcgagctaaaaagttgccttgc 1098 ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct: 1193 tacgacgatgagtgtgccatctgtaggggaccaatggctcgagctaaaaagttatcctgc 1252 Query: 1099 aaccatctatttcatctaccttgcttgcgatcttggttggatcaaggattaatggaggat 1158 |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| | | Sbjct: 1253 aaccatctatttcatctagcttgcttgcgatcatggttggaccaaggattaatggatggt 1312 Query: 1159 tactcttgtccaacttgtcgaaggccactctttctttcatctcaagg 1205 ||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1313 tactcatgtccaacttgtcgaagacctctctttctgtcatctcaagg 1359 Score = 353 bits (178), Expect = 2e-93 Identities = 384/452 (84%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 1257 tgaacagcagaatccttcagatggtgtttggagaggtgcgggtcttgattctcgcttggc 1316 |||||| ||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||| Sbjct: 1462 tgaacatcagaatcctgcagatgctgtttggagaggtgctggtcttgattctagctgggc 1521 Query: 1317 accaccgtggtcgagccctggggtggatgaccccagttcctctagtgcagtgagatctgt 1376 |||||| ||||||||||||||| |||| | |||||||| || || || |||| ||| || Sbjct: 1522 accaccatggtcgagccctgggatggacaatcccagttcttccagcgccgtgacatcagt 1581 Query: 1377 ggggcttagcggcgttcagatgatgatgaggcagttcgcttctgtgactgataattatgg 1436 ||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1582 ggggcttagtggagttcagatgatgatgaggcagttgacttcagtgactgataattatgg 1641 Query: 1437 gcatacagataccacctggaatctgtggcctgagtcaatggcaggcccttcaattattcc 1496 |||| ||||| ||||||||| ||| ||||||||| || | ||||| |||| || |||| Sbjct: 1642 gcatccagatgccacctggagtctatggcctgagccagttgcaggatcttcggttgttcc 1701 Query: 1497 gtcatcttcctcgaggcccgatggggtgt---ctgctagcttgcggttccgaggcacagc 1553 || |||||||||||||| ||||| | | ||||| ||||||||||||||||||| || Sbjct: 1702 atcctcttcctcgaggcctgatggtgcttcagctgctggcttgcggttccgaggcactgc 1761 Query: 1554 aggaacacctaacggaagcatgttgcgggttaataccatggtagatagagtacgagaagt 1613 | || | | || || ||||||| | |||| ||||||||||||||||||||||||| Sbjct: 1762 aagacccgcgaatggtagcatgtcggaggttctctccatggtagatagagtacgagaagt 1821 Query: 1614 tttaccccatatgcctgacgagctaattattgaagacctgatgagaacgaataatgtgaa 1673 |||||||||||| |||||||||||||||||||| || ||||||||||| |||||| | || Sbjct: 1822 tttaccccatatccctgacgagctaattattgaggatctgatgagaacaaataatataaa 1881 Query: 1674 tgccactgtgaataatcttctgctgatgcaat 1705 || ||||| |||||||||||||||||||||| Sbjct: 1882 cgctactgtaaataatcttctgctgatgcaat 1913 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gtgaactgcctatacgtggccgccgcatccacggcggccagcgccgccgcgctgcagtgg 132 |||||| |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 212 gtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcgctgcagtgg 271 Query: 133 tgggcggcgtccttcctcgacg 154 ||||||| |||| ||||||||| Sbjct: 272 tgggcggggtccctcctcgacg 293 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1847 taaaatgcgccagctttgtatagtagtcataactgtacaacattatgctcaatatg 1902 |||||||| || ||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 2074 taaaatgccccggctttgtatagtaatcacagctgtataatattatgctcaatatg 2129
>dbj|AK072721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P18, full insert sequence Length = 2215 Score = 981 bits (495), Expect = 0.0 Identities = 879/1007 (87%) Strand = Plus / Plus Query: 199 gtgctgcgatcgcacgtgaccgttgcgctcttagcgaatctggcggcacacgtgttcctc 258 |||||| | |||||||||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 353 gtgctgggctcgcacgtgaccgtcgcgctcctggcgaatctggcggcgcacgtgttcctc 412 Query: 259 gtcctcgtcctagctcttaagacattagtttttgttcggttaactcctacagagactaga 318 |||||| |||| | || |||||| || ||||||||| ||||| || | ||||||||| Sbjct: 413 gtcctcatcctctccctcaagacactattttttgttcaattaacctcttctgagactaga 472 Query: 319 aaagtgttggaacacatcattaactatgtaatctacaagggaacttttctcacattggtt 378 || |||||||||||||||||||||||||| | |||||||||||||||||| || ||||| Sbjct: 473 aaggtgttggaacacatcattaactatgtgctttacaagggaacttttctcccactggtt 532 Query: 379 gtgcctcctaattctcaacaaataatcctttggtcaacttggctggtccttctttgttca 438 ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 533 gtgcctcctaattctcaacaaataatcctttggtcaagttggttgggccttctttgttcc 592 Query: 439 ctgaagatgtttcaatcattggccagagagcggcttgagtgcctccatgcgtcaccctca 498 ||||||||||||||||||||||| ||||| || ||||| ||| |||| ||||| ||| Sbjct: 593 ctgaagatgtttcaatcattggctagagaacgccttgaacagctcaatgcttcaccatca 652 Query: 499 gcaactccatcgaaatatctccgtgtatattctgcattgttgctggttctttcaactgat 558 || |||||||| ||||| | ||||||||||||||| | ||||||||||| || ||||| Sbjct: 653 gcgactccatcaaaatactttcgtgtatattctgcactattgctggttctatcggctgat 712 Query: 559 ctactatggatgaagctttgtgtagggttctgcagttcatgcaattctaagttattttgg 618 |||||||||| ||||||||||| |||||||||| || || |||||| | |||||||| Sbjct: 713 gtactatggataaagctttgtgttgggttctgcaagtcgtgtaattctcaactattttgg 772 Query: 619 cttatgttatttgagccacttagtattgcctttgagtcactgcagtctatcatggtgcat 678 |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct: 773 cttatgttttttgagccacttagtattggctttgagacactgcagtcaatcatggtgcat 832 Query: 679 ggatttcagttgtttgacatttggcagcgacatctgatggacagcggtgtggactatctt 738 |||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||| Sbjct: 833 ggatttcagttgtttgacatatggcaacgacatcaaatggacagtggtgtggactatctt 892 Query: 739 gatttccaaaaaacttataaacaagcagcaggttcattttctgaatggagaggccaactt 798 |||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||| Sbjct: 893 gatttccaaaaaacttataagcaagcagcaggatctttttctgagtggagaggcagacta 952 Query: 799 ataaggaattttggttttgccattgacctgataagcttgttgatgtcacttggtcattat 858 | || ||||||||||||| ||||||| |||||||||| |||||||||||||||||||| Sbjct: 953 gtcagaaattttggttttgtcattgacttgataagcttattgatgtcacttggtcattac 1012 Query: 859 tcgatgatcttttggctccgtggtatggcgtttcacctggtcgacgcagtcctcctgttg 918 || |||||||| ||||||||||||||||||||||| ||||| ||||| || ||||| ||| Sbjct: 1013 tcaatgatcttctggctccgtggtatggcgtttcatctggttgacgctgttctcctattg 1072 Query: 919 aacttgcgtgctcttgtagtttcatttttgaagagaattaagacctacattaagttaaga 978 ||||| || |||||| ||| |||||||| |||| | || || || || |||||| || Sbjct: 1073 aacttacgcgctcttatagcttcattttggaagcggataaaaacttatgccaagttacga 1132 Query: 979 aaggcactccgttcgctcgatggagcactccctgatgctacatacgatgaaatctgcaca 1038 |||||||| |||| ||||| |||||||| || ||||||||||| ||||||||||| || Sbjct: 1133 aaggcacttagttcactcgacggagcacttccagatgctacatatgatgaaatctgtgca 1192 Query: 1039 tacgatgatgagtgtgccatctgccggggaccaatggctcgagctaaaaagttgccttgc 1098 ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct: 1193 tacgacgatgagtgtgccatctgtaggggaccaatggctcgagctaaaaagttatcctgc 1252 Query: 1099 aaccatctatttcatctaccttgcttgcgatcttggttggatcaaggattaatggaggat 1158 |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| | | Sbjct: 1253 aaccatctatttcatctagcttgcttgcgatcatggttggaccaaggattaatggatggt 1312 Query: 1159 tactcttgtccaacttgtcgaaggccactctttctttcatctcaagg 1205 ||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1313 tactcatgtccaacttgtcgaagacctctctttctgtcatctcaagg 1359 Score = 353 bits (178), Expect = 2e-93 Identities = 384/452 (84%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 1257 tgaacagcagaatccttcagatggtgtttggagaggtgcgggtcttgattctcgcttggc 1316 |||||| ||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||| Sbjct: 1462 tgaacatcagaatcctgcagatgctgtttggagaggtgctggtcttgattctagctgggc 1521 Query: 1317 accaccgtggtcgagccctggggtggatgaccccagttcctctagtgcagtgagatctgt 1376 |||||| ||||||||||||||| |||| | |||||||| || || || |||| ||| || Sbjct: 1522 accaccatggtcgagccctgggatggacaatcccagttcttccagcgccgtgacatcagt 1581 Query: 1377 ggggcttagcggcgttcagatgatgatgaggcagttcgcttctgtgactgataattatgg 1436 ||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1582 ggggcttagtggagttcagatgatgatgaggcagttgacttcagtgactgataattatgg 1641 Query: 1437 gcatacagataccacctggaatctgtggcctgagtcaatggcaggcccttcaattattcc 1496 |||| ||||| ||||||||| ||| ||||||||| || | ||||| |||| || |||| Sbjct: 1642 gcatccagatgccacctggagtctatggcctgagccagttgcaggatcttcggttgttcc 1701 Query: 1497 gtcatcttcctcgaggcccgatggggtgt---ctgctagcttgcggttccgaggcacagc 1553 || |||||||||||||| ||||| | | ||||| ||||||||||||||||||| || Sbjct: 1702 atcctcttcctcgaggcctgatggtgcttcagctgctggcttgcggttccgaggcactgc 1761 Query: 1554 aggaacacctaacggaagcatgttgcgggttaataccatggtagatagagtacgagaagt 1613 | || | | || || ||||||| | |||| ||||||||||||||||||||||||| Sbjct: 1762 aagacccgcgaatggtagcatgtcggaggttctctccatggtagatagagtacgagaagt 1821 Query: 1614 tttaccccatatgcctgacgagctaattattgaagacctgatgagaacgaataatgtgaa 1673 |||||||||||| |||||||||||||||||||| || ||||||||||| |||||| | || Sbjct: 1822 tttaccccatatccctgacgagctaattattgaggatctgatgagaacaaataatataaa 1881 Query: 1674 tgccactgtgaataatcttctgctgatgcaat 1705 || ||||| |||||||||||||||||||||| Sbjct: 1882 cgctactgtaaataatcttctgctgatgcaat 1913 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gtgaactgcctatacgtggccgccgcatccacggcggccagcgccgccgcgctgcagtgg 132 |||||| |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 212 gtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcgctgcagtgg 271 Query: 133 tgggcggcgtccttcctcgacg 154 ||||||| |||| ||||||||| Sbjct: 272 tgggcggggtccctcctcgacg 293 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1847 taaaatgcgccagctttgtatagtagtcataactgtacaacattatgctcaatatg 1902 |||||||| || ||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 2074 taaaatgccccggctttgtatagtaatcacagctgtataatattatgctcaatatg 2129
>dbj|AK060926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H12, full insert sequence Length = 1350 Score = 504 bits (254), Expect = e-139 Identities = 452/518 (87%) Strand = Plus / Plus Query: 688 ttgtttgacatttggcagcgacatctgatggacagcggtgtggactatcttgatttccaa 747 ||||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1 ttgtttgacatatggcaacgacatcaaatggacagtggtgtggactatcttgatttccaa 60 Query: 748 aaaacttataaacaagcagcaggttcattttctgaatggagaggccaacttataaggaat 807 ||||||||||| ||||||||||| || |||||||| ||||||||| ||| | || ||| Sbjct: 61 aaaacttataagcaagcagcaggatctttttctgagtggagaggcagactagtcagaaat 120 Query: 808 tttggttttgccattgacctgataagcttgttgatgtcacttggtcattattcgatgatc 867 |||||||||| ||||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 121 tttggttttgtcattgacttgataagcttattgatgtcacttggtcattgcccaatgatc 180 Query: 868 ttttggctccgtggtatggcgtttcacctggtcgacgcagtcctcctgttgaacttgcgt 927 || ||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 181 ttctggctccgtggtatggcgtttcatctggttgacgctgttctcctattgaacttgcgc 240 Query: 928 gctcttgtagtttcatttttgaagagaattaagacctacattaagttaagaaaggcactc 987 |||||| ||| |||||||| |||| | || || || || |||||| |||||||||| Sbjct: 241 gctcttatagcttcattttggaagcggataaaaacttatgccaagttacgaaaggcactt 300 Query: 988 cgttcgctcgatggagcactccctgatgctacatacgatgaaatctgcacatacgatgat 1047 |||| ||||| |||||||| || ||||||||||| ||||||||||| ||||||| ||| Sbjct: 301 agttcactcgacggagcacttccagatgctacatatgatgaaatctgtgcatacgacgat 360 Query: 1048 gagtgtgccatctgccggggaccaatggctcgagctaaaaagttgccttgcaaccatcta 1107 |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| Sbjct: 361 gagtgtgccatctgtaggggaccaatggctcgagctaaaaagttatcctgcaaccatcta 420 Query: 1108 tttcatctaccttgcttgcgatcttggttggatcaaggattaatggaggattactcttgt 1167 ||||||||| ||||||||||||| |||||||| |||||||||||||| | |||||| ||| Sbjct: 421 tttcatctagcttgcttgcgatcatggttggaccaaggattaatggatggttactcatgt 480 Query: 1168 ccaacttgtcgaaggccactctttctttcatctcaagg 1205 |||||||||||||| || |||||||| ||||||||||| Sbjct: 481 ccaacttgtcgaagacctctctttctgtcatctcaagg 518 Score = 353 bits (178), Expect = 2e-93 Identities = 384/452 (84%), Gaps = 3/452 (0%) Strand = Plus / Plus Query: 1257 tgaacagcagaatccttcagatggtgtttggagaggtgcgggtcttgattctcgcttggc 1316 |||||| ||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||| Sbjct: 621 tgaacatcagaatcctgcagatgctgtttggagaggtgctggtcttgattctagctgggc 680 Query: 1317 accaccgtggtcgagccctggggtggatgaccccagttcctctagtgcagtgagatctgt 1376 |||||| ||||||||||||||| |||| | |||||||| || || || |||| ||| || Sbjct: 681 accaccatggtcgagccctgggatggacaatcccagttcttccagcgccgtgacatcagt 740 Query: 1377 ggggcttagcggcgttcagatgatgatgaggcagttcgcttctgtgactgataattatgg 1436 ||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 741 ggggcttagtggagttcagatgatgatgaggcagttgacttcagtgactgataattatgg 800 Query: 1437 gcatacagataccacctggaatctgtggcctgagtcaatggcaggcccttcaattattcc 1496 |||| ||||| ||||||||| ||| ||||||||| || | ||||| |||| || |||| Sbjct: 801 gcatccagatgccacctggagtctatggcctgagccagttgcaggatcttcggttgttcc 860 Query: 1497 gtcatcttcctcgaggcccgatggggtgt---ctgctagcttgcggttccgaggcacagc 1553 || |||||||||||||| ||||| | | ||||| ||||||||||||||||||| || Sbjct: 861 atcctcttcctcgaggcctgatggtgcttcagctgctggcttgcggttccgaggcactgc 920 Query: 1554 aggaacacctaacggaagcatgttgcgggttaataccatggtagatagagtacgagaagt 1613 | || | | || || ||||||| | |||| ||||||||||||||||||||||||| Sbjct: 921 aagacccgcgaatggtagcatgtcggaggttctctccatggtagatagagtacgagaagt 980 Query: 1614 tttaccccatatgcctgacgagctaattattgaagacctgatgagaacgaataatgtgaa 1673 |||||||||||| |||||||||||||||||||| || ||||||||||| |||||| | || Sbjct: 981 tttaccccatatccctgacgagctaattattgaggatctgatgagaacaaataatataaa 1040 Query: 1674 tgccactgtgaataatcttctgctgatgcaat 1705 || ||||| |||||||||||||||||||||| Sbjct: 1041 cgctactgtaaataatcttctgctgatgcaat 1072 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1847 taaaatgcgccagctttgtatagtagtcataactgtacaacattatgctcaatatg 1902 |||||||| || ||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 1233 taaaatgccccggctttgtatagtaatcacagctgtataatattatgctcaatatg 1288
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 262 bits (132), Expect = 4e-66 Identities = 305/362 (84%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 1288 agaggtgcgggtcttgattctcgcttggcaccaccgtggtcgagccctggggtggatgac 1347 |||||||| |||||||||||| ||| ||||||||| ||||||||||||||| |||| | Sbjct: 17691448 agaggtgctggtcttgattctagctgggcaccaccatggtcgagccctgggatggacaat 17691389 Query: 1348 cccagttcctctagtgcagtgagatctgtggggcttagcggcgttcagatgatgatgagg 1407 |||||||| || || || |||| ||| ||||||||||| || |||||||||||||||||| Sbjct: 17691388 cccagttcttccagcgccgtgacatcagtggggcttagtggagttcagatgatgatgagg 17691329 Query: 1408 cagttcgcttctgtgactgataattatgggcatacagataccacctggaatctgtggcct 1467 ||||| |||| ||||||||||||||||||||| ||||| ||||||||| ||| |||||| Sbjct: 17691328 cagttgacttcagtgactgataattatgggcatccagatgccacctggagtctatggcct 17691269 Query: 1468 gagtcaatggcaggcccttcaattattccgtcatcttcctcgaggcccgatggggtgt-- 1525 ||| || | ||||| |||| || |||| || |||||||||||||| ||||| | | Sbjct: 17691268 gagccagttgcaggatcttcggttgttccatcctcttcctcgaggcctgatggtgcttca 17691209 Query: 1526 -ctgctagcttgcggttccgaggcacagcaggaacacctaacggaagcatgttgcgggtt 1584 ||||| ||||||||||||||||||| ||| || | | || || ||||||| | |||| Sbjct: 17691208 gctgctggcttgcggttccgaggcactgcaagacccgcgaatggtagcatgtcggaggtt 17691149 Query: 1585 aataccatggtagatagagtacgagaagttttaccccatatgcctgacgagctaattatt 1644 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17691148 ctctccatggtagatagagtacgagaagttttaccccatatccctgacgagctaattatt 17691089 Query: 1645 ga 1646 || Sbjct: 17691088 ga 17691087 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Minus Query: 660 gcagtctatcatggtgcatggatttcagttgtttgacatttggcagcgacatctgatgga 719 |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 17696838 gcagtcaatcatggtgcatggatttcagttgtttgacatatggcaacgacatcaaatgga 17696779 Query: 720 cagcggtgtggactatcttgatttccaaaaaacttataaacaagcagcaggt 771 ||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 17696778 cagtggtgtggactatcttgatttccaaaaaacttataagcaagcagcaggt 17696727 Score = 161 bits (81), Expect = 1e-35 Identities = 141/161 (87%) Strand = Plus / Minus Query: 766 gcaggttcattttctgaatggagaggccaacttataaggaattttggttttgccattgac 825 ||||| || |||||||| ||||||||| ||| | || ||||||||||||| ||||||| Sbjct: 17696178 gcaggatctttttctgagtggagaggcagactagtcagaaattttggttttgtcattgac 17696119 Query: 826 ctgataagcttgttgatgtcacttggtcattattcgatgatcttttggctccgtggtatg 885 |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 17696118 ttgataagcttattgatgtcacttggtcattactcaatgatcttctggctccgtggtatg 17696059 Query: 886 gcgtttcacctggtcgacgcagtcctcctgttgaacttgcg 926 |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 17696058 gcgtttcatctggttgacgctgttctcctattgaacttgcg 17696018 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 356 agggaacttttctcacattggttgtgcctcctaattctcaacaaataatcctttggtcaa 415 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 17698990 agggaacttttctcccactggttgtgcctcctaattctcaacaaataatcctttggtcaa 17698931 Query: 416 cttggctggtccttctttgttcactgaag 444 |||| ||| |||||||||||| |||||| Sbjct: 17698930 gttggttgggccttctttgttccctgaag 17698902 Score = 101 bits (51), Expect = 9e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 1065 gggaccaatggctcgagctaaaaagttgccttgcaaccatctatttcatctaccttgctt 1124 ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 17695706 gggaccaatggctcgagctaaaaagttatcctgcaaccatctatttcatctagcttgctt 17695647 Query: 1125 gcgatcttggt 1135 |||||| |||| Sbjct: 17695646 gcgatcatggt 17695636 Score = 99.6 bits (50), Expect = 4e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 566 ggatgaagctttgtgtagggttctgcagttcatgcaattctaagttattttggcttatgt 625 |||| ||||||||||| |||||||||| || || |||||| | ||||||||||||||| Sbjct: 17697152 ggataaagctttgtgttgggttctgcaagtcgtgtaattctcaactattttggcttatgt 17697093 Query: 626 tatttgagccacttagtattgcctttgagtcactgcag 663 | ||||||||||||||||||| ||||||| |||||||| Sbjct: 17697092 tttttgagccacttagtattggctttgagacactgcag 17697055 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 73 gtgaactgcctatacgtggccgccgcatccacggcggccagcgccgccgcgctgcagtgg 132 |||||| |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 17701522 gtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcgctgcagtgg 17701463 Query: 133 tgggcggcgtccttcctcgacg 154 ||||||| |||| ||||||||| Sbjct: 17701462 tgggcggggtccctcctcgacg 17701441 Score = 95.6 bits (48), Expect = 6e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 970 aagttaagaaaggcactccgttcgctcgatggagcactccctgatgctacatacgatgaa 1029 |||||| |||||||||| |||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 17695886 aagttacgaaaggcacttagttcactcgacggagcacttccagatgctacatatgatgaa 17695827 Query: 1030 atctgcacatacgatgatgagtgtgccatctg 1061 ||||| ||||||| ||||||||||||||||| Sbjct: 17695826 atctgtgcatacgacgatgagtgtgccatctg 17695795 Score = 89.7 bits (45), Expect = 4e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 1133 ggttggatcaaggattaatggaggattactcttgtccaacttgtcgaaggccactctttc 1192 ||||||| |||||||||||||| | |||||| ||||||||||||||||| || ||||||| Sbjct: 17694956 ggttggaccaaggattaatggatggttactcatgtccaacttgtcgaagacctctctttc 17694897 Query: 1193 tttcatctcaagg 1205 | ||||||||||| Sbjct: 17694896 tgtcatctcaagg 17694884 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 199 gtgctgcgatcgcacgtgaccgttgcgctcttagcgaatctggcggcacacgtgttcctc 258 |||||| | |||||||||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 17701381 gtgctgggctcgcacgtgaccgtcgcgctcctggcgaatctggcggcgcacgtgttcctc 17701322 Query: 259 gtcctcgtcct 269 |||||| |||| Sbjct: 17701321 gtcctcatcct 17701311 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 443 agatgtttcaatcattggccagagagcggcttgagtgcctccatgcgtcaccctcagcaa 502 ||||||||||||||||||| ||||| || ||||| ||| |||| ||||| ||||| | Sbjct: 17698826 agatgtttcaatcattggctagagaacgccttgaacagctcaatgcttcaccatcagcga 17698767 Query: 503 ctccatcgaaatatctccgtgtatattctgcattgttgctggttctttcaactgatctac 562 ||||||| ||||| | ||||||||||||||| | ||||||||||| || ||||| ||| Sbjct: 17698766 ctccatcaaaatactttcgtgtatattctgcactattgctggttctatcggctgatgtac 17698707 Query: 563 tatgg 567 ||||| Sbjct: 17698706 tatgg 17698702 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 310 gagactagaaaagtgttggaacacatcattaactatgt 347 ||||||||||| |||||||||||||||||||||||||| Sbjct: 17699880 gagactagaaaggtgttggaacacatcattaactatgt 17699843 Score = 61.9 bits (31), Expect = 8e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1651 ctgatgagaacgaataatgtgaatgccactgtgaataatcttctgctgatgcaat 1705 ||||||||||| |||||| | || || ||||| |||||||||||||||||||||| Sbjct: 17690995 ctgatgagaacaaataatataaacgctactgtaaataatcttctgctgatgcaat 17690941 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 1847 taaaatgcgccagctttgtatagtagtcataactgtacaacattatgctcaatatg 1902 |||||||| || ||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 17690780 taaaatgccccggctttgtatagtaatcacagctgtataatattatgctcaatatg 17690725
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 262 bits (132), Expect = 4e-66 Identities = 305/362 (84%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 1288 agaggtgcgggtcttgattctcgcttggcaccaccgtggtcgagccctggggtggatgac 1347 |||||||| |||||||||||| ||| ||||||||| ||||||||||||||| |||| | Sbjct: 95481 agaggtgctggtcttgattctagctgggcaccaccatggtcgagccctgggatggacaat 95422 Query: 1348 cccagttcctctagtgcagtgagatctgtggggcttagcggcgttcagatgatgatgagg 1407 |||||||| || || || |||| ||| ||||||||||| || |||||||||||||||||| Sbjct: 95421 cccagttcttccagcgccgtgacatcagtggggcttagtggagttcagatgatgatgagg 95362 Query: 1408 cagttcgcttctgtgactgataattatgggcatacagataccacctggaatctgtggcct 1467 ||||| |||| ||||||||||||||||||||| ||||| ||||||||| ||| |||||| Sbjct: 95361 cagttgacttcagtgactgataattatgggcatccagatgccacctggagtctatggcct 95302 Query: 1468 gagtcaatggcaggcccttcaattattccgtcatcttcctcgaggcccgatggggtgt-- 1525 ||| || | ||||| |||| || |||| || |||||||||||||| ||||| | | Sbjct: 95301 gagccagttgcaggatcttcggttgttccatcctcttcctcgaggcctgatggtgcttca 95242 Query: 1526 -ctgctagcttgcggttccgaggcacagcaggaacacctaacggaagcatgttgcgggtt 1584 ||||| ||||||||||||||||||| ||| || | | || || ||||||| | |||| Sbjct: 95241 gctgctggcttgcggttccgaggcactgcaagacccgcgaatggtagcatgtcggaggtt 95182 Query: 1585 aataccatggtagatagagtacgagaagttttaccccatatgcctgacgagctaattatt 1644 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 95181 ctctccatggtagatagagtacgagaagttttaccccatatccctgacgagctaattatt 95122 Query: 1645 ga 1646 || Sbjct: 95121 ga 95120 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Minus Query: 660 gcagtctatcatggtgcatggatttcagttgtttgacatttggcagcgacatctgatgga 719 |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 100871 gcagtcaatcatggtgcatggatttcagttgtttgacatatggcaacgacatcaaatgga 100812 Query: 720 cagcggtgtggactatcttgatttccaaaaaacttataaacaagcagcaggt 771 ||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100811 cagtggtgtggactatcttgatttccaaaaaacttataagcaagcagcaggt 100760 Score = 161 bits (81), Expect = 1e-35 Identities = 141/161 (87%) Strand = Plus / Minus Query: 766 gcaggttcattttctgaatggagaggccaacttataaggaattttggttttgccattgac 825 ||||| || |||||||| ||||||||| ||| | || ||||||||||||| ||||||| Sbjct: 100211 gcaggatctttttctgagtggagaggcagactagtcagaaattttggttttgtcattgac 100152 Query: 826 ctgataagcttgttgatgtcacttggtcattattcgatgatcttttggctccgtggtatg 885 |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 100151 ttgataagcttattgatgtcacttggtcattactcaatgatcttctggctccgtggtatg 100092 Query: 886 gcgtttcacctggtcgacgcagtcctcctgttgaacttgcg 926 |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 100091 gcgtttcatctggttgacgctgttctcctattgaacttgcg 100051 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 356 agggaacttttctcacattggttgtgcctcctaattctcaacaaataatcctttggtcaa 415 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103023 agggaacttttctcccactggttgtgcctcctaattctcaacaaataatcctttggtcaa 102964 Query: 416 cttggctggtccttctttgttcactgaag 444 |||| ||| |||||||||||| |||||| Sbjct: 102963 gttggttgggccttctttgttccctgaag 102935 Score = 101 bits (51), Expect = 9e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 1065 gggaccaatggctcgagctaaaaagttgccttgcaaccatctatttcatctaccttgctt 1124 ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 99739 gggaccaatggctcgagctaaaaagttatcctgcaaccatctatttcatctagcttgctt 99680 Query: 1125 gcgatcttggt 1135 |||||| |||| Sbjct: 99679 gcgatcatggt 99669 Score = 99.6 bits (50), Expect = 4e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 566 ggatgaagctttgtgtagggttctgcagttcatgcaattctaagttattttggcttatgt 625 |||| ||||||||||| |||||||||| || || |||||| | ||||||||||||||| Sbjct: 101185 ggataaagctttgtgttgggttctgcaagtcgtgtaattctcaactattttggcttatgt 101126 Query: 626 tatttgagccacttagtattgcctttgagtcactgcag 663 | ||||||||||||||||||| ||||||| |||||||| Sbjct: 101125 tttttgagccacttagtattggctttgagacactgcag 101088 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 73 gtgaactgcctatacgtggccgccgcatccacggcggccagcgccgccgcgctgcagtgg 132 |||||| |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 105555 gtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcgctgcagtgg 105496 Query: 133 tgggcggcgtccttcctcgacg 154 ||||||| |||| ||||||||| Sbjct: 105495 tgggcggggtccctcctcgacg 105474 Score = 95.6 bits (48), Expect = 6e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 970 aagttaagaaaggcactccgttcgctcgatggagcactccctgatgctacatacgatgaa 1029 |||||| |||||||||| |||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 99919 aagttacgaaaggcacttagttcactcgacggagcacttccagatgctacatatgatgaa 99860 Query: 1030 atctgcacatacgatgatgagtgtgccatctg 1061 ||||| ||||||| ||||||||||||||||| Sbjct: 99859 atctgtgcatacgacgatgagtgtgccatctg 99828 Score = 89.7 bits (45), Expect = 4e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 1133 ggttggatcaaggattaatggaggattactcttgtccaacttgtcgaaggccactctttc 1192 ||||||| |||||||||||||| | |||||| ||||||||||||||||| || ||||||| Sbjct: 98989 ggttggaccaaggattaatggatggttactcatgtccaacttgtcgaagacctctctttc 98930 Query: 1193 tttcatctcaagg 1205 | ||||||||||| Sbjct: 98929 tgtcatctcaagg 98917 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 199 gtgctgcgatcgcacgtgaccgttgcgctcttagcgaatctggcggcacacgtgttcctc 258 |||||| | |||||||||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 105414 gtgctgggctcgcacgtgaccgtcgcgctcctggcgaatctggcggcgcacgtgttcctc 105355 Query: 259 gtcctcgtcct 269 |||||| |||| Sbjct: 105354 gtcctcatcct 105344 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 443 agatgtttcaatcattggccagagagcggcttgagtgcctccatgcgtcaccctcagcaa 502 ||||||||||||||||||| ||||| || ||||| ||| |||| ||||| ||||| | Sbjct: 102859 agatgtttcaatcattggctagagaacgccttgaacagctcaatgcttcaccatcagcga 102800 Query: 503 ctccatcgaaatatctccgtgtatattctgcattgttgctggttctttcaactgatctac 562 ||||||| ||||| | ||||||||||||||| | ||||||||||| || ||||| ||| Sbjct: 102799 ctccatcaaaatactttcgtgtatattctgcactattgctggttctatcggctgatgtac 102740 Query: 563 tatgg 567 ||||| Sbjct: 102739 tatgg 102735 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 310 gagactagaaaagtgttggaacacatcattaactatgt 347 ||||||||||| |||||||||||||||||||||||||| Sbjct: 103913 gagactagaaaggtgttggaacacatcattaactatgt 103876 Score = 61.9 bits (31), Expect = 8e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1651 ctgatgagaacgaataatgtgaatgccactgtgaataatcttctgctgatgcaat 1705 ||||||||||| |||||| | || || ||||| |||||||||||||||||||||| Sbjct: 95028 ctgatgagaacaaataatataaacgctactgtaaataatcttctgctgatgcaat 94974 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 1847 taaaatgcgccagctttgtatagtagtcataactgtacaacattatgctcaatatg 1902 |||||||| || ||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 94813 taaaatgccccggctttgtatagtaatcacagctgtataatattatgctcaatatg 94758
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Minus Query: 660 gcagtctatcatggtgcatggatttcagttgtttgacatttggcagcgacatctgatgga 719 |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 1591 gcagtcaatcatggtgcatggatttcagttgtttgacatatggcaacgacatcaaatgga 1532 Query: 720 cagcggtgtggactatcttgatttccaaaaaacttataaacaagcagcaggt 771 ||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1531 cagtggtgtggactatcttgatttccaaaaaacttataagcaagcagcaggt 1480 Score = 161 bits (81), Expect = 1e-35 Identities = 141/161 (87%) Strand = Plus / Minus Query: 766 gcaggttcattttctgaatggagaggccaacttataaggaattttggttttgccattgac 825 ||||| || |||||||| ||||||||| ||| | || ||||||||||||| ||||||| Sbjct: 931 gcaggatctttttctgagtggagaggcagactagtcagaaattttggttttgtcattgac 872 Query: 826 ctgataagcttgttgatgtcacttggtcattattcgatgatcttttggctccgtggtatg 885 |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 871 ttgataagcttattgatgtcacttggtcattactcaatgatcttctggctccgtggtatg 812 Query: 886 gcgtttcacctggtcgacgcagtcctcctgttgaacttgcg 926 |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 811 gcgtttcatctggttgacgctgttctcctattgaacttgcg 771 Score = 129 bits (65), Expect = 4e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 356 agggaacttttctcacattggttgtgcctcctaattctcaacaaataatcctttggtcaa 415 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3743 agggaacttttctcccactggttgtgcctcctaattctcaacaaataatcctttggtcaa 3684 Query: 416 cttggctggtccttctttgttcactgaag 444 |||| ||| |||||||||||| |||||| Sbjct: 3683 gttggttgggccttctttgttccctgaag 3655 Score = 101 bits (51), Expect = 9e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 1065 gggaccaatggctcgagctaaaaagttgccttgcaaccatctatttcatctaccttgctt 1124 ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 459 gggaccaatggctcgagctaaaaagttatcctgcaaccatctatttcatctagcttgctt 400 Query: 1125 gcgatcttggt 1135 |||||| |||| Sbjct: 399 gcgatcatggt 389 Score = 99.6 bits (50), Expect = 4e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 566 ggatgaagctttgtgtagggttctgcagttcatgcaattctaagttattttggcttatgt 625 |||| ||||||||||| |||||||||| || || |||||| | ||||||||||||||| Sbjct: 1905 ggataaagctttgtgttgggttctgcaagtcgtgtaattctcaactattttggcttatgt 1846 Query: 626 tatttgagccacttagtattgcctttgagtcactgcag 663 | ||||||||||||||||||| ||||||| |||||||| Sbjct: 1845 tttttgagccacttagtattggctttgagacactgcag 1808 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 73 gtgaactgcctatacgtggccgccgcatccacggcggccagcgccgccgcgctgcagtgg 132 |||||| |||| ||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 6275 gtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcgctgcagtgg 6216 Query: 133 tgggcggcgtccttcctcgacg 154 ||||||| |||| ||||||||| Sbjct: 6215 tgggcggggtccctcctcgacg 6194 Score = 95.6 bits (48), Expect = 6e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 970 aagttaagaaaggcactccgttcgctcgatggagcactccctgatgctacatacgatgaa 1029 |||||| |||||||||| |||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 639 aagttacgaaaggcacttagttcactcgacggagcacttccagatgctacatatgatgaa 580 Query: 1030 atctgcacatacgatgatgagtgtgccatctg 1061 ||||| ||||||| ||||||||||||||||| Sbjct: 579 atctgtgcatacgacgatgagtgtgccatctg 548 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 199 gtgctgcgatcgcacgtgaccgttgcgctcttagcgaatctggcggcacacgtgttcctc 258 |||||| | |||||||||||||| |||||| | |||||||||||||| |||||||||||| Sbjct: 6134 gtgctgggctcgcacgtgaccgtcgcgctcctggcgaatctggcggcgcacgtgttcctc 6075 Query: 259 gtcctcgtcct 269 |||||| |||| Sbjct: 6074 gtcctcatcct 6064 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 443 agatgtttcaatcattggccagagagcggcttgagtgcctccatgcgtcaccctcagcaa 502 ||||||||||||||||||| ||||| || ||||| ||| |||| ||||| ||||| | Sbjct: 3579 agatgtttcaatcattggctagagaacgccttgaacagctcaatgcttcaccatcagcga 3520 Query: 503 ctccatcgaaatatctccgtgtatattctgcattgttgctggttctttcaactgatctac 562 ||||||| ||||| | ||||||||||||||| | ||||||||||| || ||||| ||| Sbjct: 3519 ctccatcaaaatactttcgtgtatattctgcactattgctggttctatcggctgatgtac 3460 Query: 563 tatgg 567 ||||| Sbjct: 3459 tatgg 3455 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 310 gagactagaaaagtgttggaacacatcattaactatgt 347 ||||||||||| |||||||||||||||||||||||||| Sbjct: 4633 gagactagaaaggtgttggaacacatcattaactatgt 4596
>gb|AY112147.1| Zea mays CL34141_1 mRNA sequence Length = 782 Score = 83.8 bits (42), Expect = 2e-12 Identities = 96/114 (84%) Strand = Plus / Plus Query: 1257 tgaacagcagaatccttcagatggtgtttggagaggtgcgggtcttgattctcgcttggc 1316 |||||||||||| |||||||||| ||||||||||||||| ||||| ||| || ||| | Sbjct: 115 tgaacagcagaacccttcagatgctgtttggagaggtgctggtctggatgctagctggat 174 Query: 1317 accaccgtggtcgagccctggggtggatgaccccagttcctctagtgcagtgag 1370 ||||||||||| ||||||| | |||| | || |||||||| ||||||||||| Sbjct: 175 tccaccgtggtcaagccctgtgatggaccatccgagttcctccagtgcagtgag 228 Score = 69.9 bits (35), Expect = 3e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 1591 atggtagatagagtacgagaagttttaccccatatgcctgacgagctaattattgaagac 1650 |||||||||||||| || |||||| |||| ||||| ||||| |||||||| | || || Sbjct: 452 atggtagatagagtgcgggaagttctacctcatatccctgatgagctaatcttagaggat 511 Query: 1651 ctgatgagaacgaataatgtgaatgccactgtgaataatcttctgctgatgcaat 1705 ||||||| || || || | || || |||||||||||||||||||||||||||| Sbjct: 512 ttgatgaggacaaacaacataaacgcgactgtgaataatcttctgctgatgcaat 566
>ref|NM_124524.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G51450) mRNA, complete cds Length = 2220 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1126 cgatcttggttggatcaaggattaatggaggattactcttgtccaacttg 1175 ||||| |||||||||||||| |||| |||| |||||||||||| ||||| Sbjct: 1202 cgatcatggttggatcaaggtttaaatgaggtttactcttgtcctacttg 1251
>gb|AY062101.1| Arabidopsis thaliana AT5g51450/MFG13_16 mRNA, complete cds Length = 2223 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1126 cgatcttggttggatcaaggattaatggaggattactcttgtccaacttg 1175 ||||| |||||||||||||| |||| |||| |||||||||||| ||||| Sbjct: 1203 cgatcatggttggatcaaggtttaaatgaggtttactcttgtcctacttg 1252
>dbj|AB025621.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFG13 Length = 48008 Score = 46.1 bits (23), Expect = 0.49 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1133 ggttggatcaaggattaatggaggattactcttgtccaacttg 1175 ||||||||||||| |||| |||| |||||||||||| ||||| Sbjct: 42643 ggttggatcaaggtttaaatgaggtttactcttgtcctacttg 42685
>gb|AC147775.5| Medicago truncatula clone mth2-13d20, complete sequence Length = 117523 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1216 tcaacaacagcagagatagcaa 1237 |||||||||||||||||||||| Sbjct: 24258 tcaacaacagcagagatagcaa 24279
>gb|AC158953.8| Mus musculus chromosome 3, clone RP23-437C24, complete sequence Length = 204136 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1916 tatgtagaaagatgcaagtgct 1937 |||||||||||||||||||||| Sbjct: 20996 tatgtagaaagatgcaagtgct 20975
>gb|AC164077.5| Mus musculus chromosome 3, clone RP24-352M15, complete sequence Length = 159925 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1916 tatgtagaaagatgcaagtgct 1937 |||||||||||||||||||||| Sbjct: 147591 tatgtagaaagatgcaagtgct 147570
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gcggccagcgccgccgcgctgc 127 |||||||||||||||||||||| Sbjct: 3365314 gcggccagcgccgccgcgctgc 3365335
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 ggccagcgccgccgcgctgcag 129 |||||||||||||||||||||| Sbjct: 1193733 ggccagcgccgccgcgctgcag 1193712
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 tccacggcggccagcgccgccg 121 |||||||||||||||||||||| Sbjct: 3744263 tccacggcggccagcgccgccg 3744242
>gb|AC111062.13| Mus musculus chromosome 3, clone RP24-100J21, complete sequence Length = 214132 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1916 tatgtagaaagatgcaagtgct 1937 |||||||||||||||||||||| Sbjct: 129418 tatgtagaaagatgcaagtgct 129439
>dbj|AK154640.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101N10 product:unclassifiable, full insert sequence Length = 3331 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 ctcgtcctcgtcctagctctta 277 |||||||||||||||||||||| Sbjct: 1992 ctcgtcctcgtcctagctctta 2013
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 90 ggccgccgcatccacggcggccagcgccgccgcg 123 |||||||||| || | |||||||||||||||||| Sbjct: 6842 ggccgccgcagccgcagcggccagcgccgccgcg 6809
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 90 ggccgccgcatccacggcggccagcgccgccgcg 123 |||||||||| || | |||||||||||||||||| Sbjct: 37642 ggccgccgcagccgcagcggccagcgccgccgcg 37609
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gcggccagcgccgccgcgctgc 127 |||||||||||||||||||||| Sbjct: 251901 gcggccagcgccgccgcgctgc 251922
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 gcggccagcgccgccgcgctgc 127 |||||||||||||||||||||| Sbjct: 202553 gcggccagcgccgccgcgctgc 202574
>gb|AC150980.20| Medicago truncatula clone mth2-165j9, complete sequence Length = 119548 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1216 tcaacaacagcagagatagcaa 1237 |||||||||||||||||||||| Sbjct: 13515 tcaacaacagcagagatagcaa 13494
>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete sequence Length = 202500 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 ctcgtcctcgtcctagctctta 277 |||||||||||||||||||||| Sbjct: 175619 ctcgtcctcgtcctagctctta 175640
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 cggcggccagcgccgccgcgctgca 128 |||| |||||||||||||||||||| Sbjct: 2223432 cggcagccagcgccgccgcgctgca 2223408
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ggcggccagcgccgccgcgct 125 ||||||||||||||||||||| Sbjct: 5886060 ggcggccagcgccgccgcgct 5886080
>ref|XM_001108001.1| PREDICTED: Macaca mulatta deoxyhypusine synthase, transcript variant 2 (DHPS), mRNA Length = 1385 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cacggcggccagcgccgccgc 122 ||||||||||||||||||||| Sbjct: 180 cacggcggccagcgccgccgc 160
>ref|XM_001108055.1| PREDICTED: Macaca mulatta deoxyhypusine synthase, transcript variant 3 (DHPS), mRNA Length = 1412 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cacggcggccagcgccgccgc 122 ||||||||||||||||||||| Sbjct: 180 cacggcggccagcgccgccgc 160
>ref|XM_001108116.1| PREDICTED: Macaca mulatta deoxyhypusine synthase, transcript variant 4 (DHPS), mRNA Length = 1559 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cacggcggccagcgccgccgc 122 ||||||||||||||||||||| Sbjct: 186 cacggcggccagcgccgccgc 166
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gcggccagcgccgccgcgctg 126 ||||||||||||||||||||| Sbjct: 919356 gcggccagcgccgccgcgctg 919336
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 gggacggggatgtcggcggcgggga 185 |||||||||||| |||||||||||| Sbjct: 94782 gggacggggatggcggcggcgggga 94758
>ref|NM_001032336.1| Xenopus tropicalis hypothetical protein mgc107988 (mgc107988), mRNA gb|BC098089.1| Xenopus tropicalis hypothetical protein mgc107988, mRNA (cDNA clone MGC:107988 IMAGE:6998135), complete cds Length = 2640 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 825 cctgataagcttgttgatgtcactt 849 |||||||||||||||| |||||||| Sbjct: 488 cctgataagcttgttggtgtcactt 512
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ggcggcggggactggcttaag 195 ||||||||||||||||||||| Sbjct: 292333 ggcggcggggactggcttaag 292353
>ref|XM_460434.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F01892g) partial mRNA Length = 1254 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 acaacatttaacgatgatatt 1737 ||||||||||||||||||||| Sbjct: 1084 acaacatttaacgatgatatt 1104
>gb|AC099674.2| Homo sapiens chromosome 1 clone RP11-143H12, complete sequence Length = 181928 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1897 aatatgctgtagattaatgta 1917 ||||||||||||||||||||| Sbjct: 65869 aatatgctgtagattaatgta 65889
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 gggacggggatgtcggcggcgggga 185 |||||||||||| |||||||||||| Sbjct: 7467907 gggacggggatggcggcggcgggga 7467931
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 gggacggggatgtcggcggcgggga 185 |||||||||||| |||||||||||| Sbjct: 9654895 gggacggggatggcggcggcgggga 9654919
>emb|BX901925.10| Zebrafish DNA sequence from clone DKEYP-86C11 in linkage group 17, complete sequence Length = 187245 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1944 caaataaaattactataagta 1964 ||||||||||||||||||||| Sbjct: 56 caaataaaattactataagta 76
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1717 acaacatttaacgatgatatt 1737 ||||||||||||||||||||| Sbjct: 146987 acaacatttaacgatgatatt 147007
>emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in linkage group 1, complete sequence Length = 173643 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 737 ttgatttccaaaaaacttata 757 ||||||||||||||||||||| Sbjct: 17642 ttgatttccaaaaaacttata 17622
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 gggacggggatgtcggcggcgggga 185 |||||||||||| |||||||||||| Sbjct: 57583 gggacggggatggcggcggcgggga 57607
>emb|AL772159.12| Mouse DNA sequence from clone RP23-107H15 on chromosome 2, complete sequence Length = 188816 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 759 acaagcagcaggttcattttc 779 ||||||||||||||||||||| Sbjct: 7492 acaagcagcaggttcattttc 7472
>gb|M29047.1|FIBEGASE F.succinogenes endoglucanase 3 (cel3) gene, complete cds Length = 2310 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1810 tgtaataagtgttttggtcta 1830 ||||||||||||||||||||| Sbjct: 84 tgtaataagtgttttggtcta 64 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 353,335,238 Number of extensions: 18438044 Number of successful extensions: 365948 Number of sequences better than 10.0: 43 Number of HSP's gapped: 365939 Number of HSP's successfully gapped: 101 Length of query: 1983 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1960 Effective length of database: 18,503,978,556 Effective search space: 36267797969760 Effective search space used: 36267797969760 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
