ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf68e10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101851:Os03g0279400 | 738 | 0.0 | 2 | AK106253:Os03g0279400 | 565 | e-161 | 3 | AK107222: | 190 | 3e-48 | 4 | AK121357:Os02g0793100 | 34 | 0.37 | 5 | Os05g0582000:Os05g0582000 | 33 | 0.64 | 6 | Os03g0351300:Os03g0351300 | 33 | 0.83 | 7 | Os03g0740200:Os03g0740200 | 32 | 1.1 | 8 | AK108192:Os07g0587200 | 30 | 5.4 | 9 | AK107576:Os07g0619500 | 30 | 7.0 | 10 | AK106997:Os01g0677000 | 30 | 7.0 | 11 | AK072031:Os07g0619500 | 30 | 7.0 | 12 | AK103808:Os01g0104000 | 30 | 7.0 | 13 | AK072087:Os01g0104000 | 30 | 7.0 | 14 | AK111743:Os06g0275500 | 29 | 9.2 | 15 | AK105545:Os05g0304900 | 29 | 9.2 | 16 | AK100709:Os02g0700000 | 29 | 9.2 |
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>AK101851:Os03g0279400 | Length = 463 Score = 738 bits (1904), Expect = 0.0 Identities = 384/463 (82%), Positives = 394/463 (85%) Frame = +1 Query: 88 MPPPSLLLFHCRAXXXXXXXXXXXXXXXXXVVCSASTAEGYISAAPILLPDGPWKQVEGG 267 MPPPSLLL H R + AEG+ISAAPILLPDGPWKQVEGG Sbjct: 1 MPPPSLLLLHPRTPLPHHHRSSFRTSSPRPSRMVCAAAEGFISAAPILLPDGPWKQVEGG 60 Query: 268 VTAAKGFKAAGIYGGLRAKGQKPDLALVACDVDATVAGSFTTNVVAAAPVLYCKRVLTSS 447 VTAAKGFKAAGIYGGLRAKG+KPDLALVACDVDATVAG+FTTNVVAAAPVLYCKRVL SS Sbjct: 61 VTAAKGFKAAGIYGGLRAKGEKPDLALVACDVDATVAGAFTTNVVAAAPVLYCKRVLNSS 120 Query: 448 KTARAVLINAGQANAATGDAGYQDAVDSAEAVAKLLNVSTNDILIQSTGVIGQRIKREAL 627 KTARAVLINAGQANAATGDAGYQD VDSA+AVAKLLNVSTNDILIQSTGVIGQRIK+EAL Sbjct: 121 KTARAVLINAGQANAATGDAGYQDTVDSADAVAKLLNVSTNDILIQSTGVIGQRIKKEAL 180 Query: 628 INSLPRLVGXXXXXXXXXXXXAVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP 807 +NSL RLVG AVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP Sbjct: 181 VNSLHRLVGSLSSSIEGANSAAVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP 240 Query: 808 NMATMLGVLTTDAQVRSDVWREMVRTSVSRSFNQITVDGDTSTNDCVIAMASGLSGLSDI 987 NMATMLGVLTTDAQV SDVWREMVRTSVSRSFNQITVDGDTSTNDCVIA+ASGLSGLS I Sbjct: 241 NMATMLGVLTTDAQVSSDVWREMVRTSVSRSFNQITVDGDTSTNDCVIALASGLSGLSSI 300 Query: 988 LTHDSAEAQQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVTGANNEADAAKMXXXXXXX 1167 LTHDS EAQQ QACLDAVMQGLAKSIAWDGEGATCLIEVTV GANNEA+AAK+ Sbjct: 301 LTHDSTEAQQFQACLDAVMQGLAKSIAWDGEGATCLIEVTVAGANNEAEAAKIARSVASS 360 Query: 1168 XXXXXXXFGRDPNWGRIACSVGYSGIHFDADQLDISLGVIPLMKNGQPLPFDRSAASKYL 1347 FGRDPNWGRIACSVGYSGI FDADQLDISLG IPLMKNGQPLPFDRSAASKYL Sbjct: 361 SLVKAAVFGRDPNWGRIACSVGYSGIQFDADQLDISLGAIPLMKNGQPLPFDRSAASKYL 420 Query: 1348 KDAGDIHGTVNIDVSVXXXXXXXKAWGCDLSYKYVEINAEYTT 1476 KDAGDIHGTVNIDVSV KAWGCDLSYKYVEINAEYTT Sbjct: 421 KDAGDIHGTVNIDVSVGRGGGSGKAWGCDLSYKYVEINAEYTT 463
>AK106253:Os03g0279400 | Length = 365 Score = 565 bits (1456), Expect = e-161 Identities = 297/353 (84%), Positives = 307/353 (86%) Frame = +1 Query: 88 MPPPSLLLFHCRAXXXXXXXXXXXXXXXXXVVCSASTAEGYISAAPILLPDGPWKQVEGG 267 MPPPSLLL H R + AEG+ISAAPILLPDGPWKQVEGG Sbjct: 1 MPPPSLLLLHPRTPLPHHHRSSFRTSSPRPSRMVCAAAEGFISAAPILLPDGPWKQVEGG 60 Query: 268 VTAAKGFKAAGIYGGLRAKGQKPDLALVACDVDATVAGSFTTNVVAAAPVLYCKRVLTSS 447 VTAAKGFKAAGIYGGLRAKG+KPDLALVACDVDATVAG+FTTNVVAAAPVLYCKRVL SS Sbjct: 61 VTAAKGFKAAGIYGGLRAKGEKPDLALVACDVDATVAGAFTTNVVAAAPVLYCKRVLNSS 120 Query: 448 KTARAVLINAGQANAATGDAGYQDAVDSAEAVAKLLNVSTNDILIQSTGVIGQRIKREAL 627 KTARAVLINAGQANAATGDAGYQD VDSA+AVAKLLNVSTNDILIQSTGVIGQRIK+EAL Sbjct: 121 KTARAVLINAGQANAATGDAGYQDTVDSADAVAKLLNVSTNDILIQSTGVIGQRIKKEAL 180 Query: 628 INSLPRLVGXXXXXXXXXXXXAVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP 807 +NSL RLVG AVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP Sbjct: 181 VNSLHRLVGSLSSSIEGANSAAVAITTTDLVSKSIAVQTEIGGVPIKIGGMAKGSGMIHP 240 Query: 808 NMATMLGVLTTDAQVRSDVWREMVRTSVSRSFNQITVDGDTSTNDCVIAMASGLSGLSDI 987 NMATMLGVLTTDAQV SDVWREMVRTSVSRSFNQITVDGDTSTNDCVIA+ASGLSGLS I Sbjct: 241 NMATMLGVLTTDAQVSSDVWREMVRTSVSRSFNQITVDGDTSTNDCVIALASGLSGLSSI 300 Query: 988 LTHDSAEAQQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVTGANNEADAAKM 1146 LTHDS EAQQ QACLDAVMQGLAKSIAWDGEGATCLIEVTV GANNEA+AAK+ Sbjct: 301 LTHDSTEAQQFQACLDAVMQGLAKSIAWDGEGATCLIEVTVAGANNEAEAAKI 353
>AK107222: | Length = 494 Score = 190 bits (482), Expect = 3e-48 Identities = 146/450 (32%), Positives = 205/450 (45%), Gaps = 53/450 (11%) Frame = +1 Query: 280 KGFKAAGIYGGLRAK----------------GQKPDLALVACDVDATVAGSFTTNVVAAA 411 KGF + Y G++A KPDLAL+ V A AG+FT NV AA Sbjct: 48 KGFVVSSTYAGIKAAISPKPADGAAAAASNPNPKPDLALIVSTVPAAAAGTFTRNVFKAA 107 Query: 412 PVLYCKRVLTSSKTA------RAVLINAGQANAATGDAGYQDAVDSAEAVAKLL------ 555 PV+ VL A ++VL+N+G ANA TG G QDA+ E V K L Sbjct: 108 PVVVSNEVLVEGAKAASGARVQSVLVNSGCANAVTGTQGMQDALACVELVKKNLAPHPGL 167 Query: 556 --NVSTNDILIQSTGVIGQRIKREALINSLPRLVGXXXXXXXXXXXX--AVAITTTDLVS 723 + + L+ STGVIG + A+ +P L A A TTD Sbjct: 168 AQSAEGRETLLLSTGVIGVPLPMPAIKRCIPHLANGMILRSDPESWRETARAFMTTDTFP 227 Query: 724 KSIAVQTEIGGVPIKIGGMAKGSGMIHPNM--------ATMLGVLTTDAQVRSDVWREMV 879 K A ++G ++ G+ KG+GMIHP M ATMLG++ TDA + + + Sbjct: 228 KLRAKTFKLGDTECRMIGIDKGAGMIHPAMTAPGGGLHATMLGLIATDAAIAPAALQTAL 287 Query: 880 RTSVSRSFNQITVDGDTSTNDCVIAMASG--LSGLSDILTHDSAEAQQLQACLDAVMQGL 1053 +V+RSFN I+VDGD STND ++ +A+G + + L SA A L A Q L Sbjct: 288 NRAVARSFNCISVDGDMSTNDTILLLANGQATARRTAELDESSAHFDAFVAELTAFCQEL 347 Query: 1054 AKSIAWDGEGATCLIEVTVTGANNEADAAKMXXXXXXXXXXXXXXFGRDPNWGRIACSVG 1233 ++ I DGEGA +E++ T A + A + G D NWGRI SVG Sbjct: 348 SQLIVRDGEGAEKFVEISCTNAPSFDVAHGLLSRLVTSMLFKCAIHGEDANWGRILASVG 407 Query: 1234 YSG----IHFDADQLDIS-------LGVIPLMKNGQPLPFDRSAASKYLKDAGDIHGTVN 1380 + H D ++ +S L I ++ NG P D + +K L+ V Sbjct: 408 GADPTLTAHIDPSKVSVSFVDPVGQLPAITVLSNGNPAKVDEAEINKLLQKE-----DVK 462 Query: 1381 IDVSVXXXXXXXKAWGCDLSYKYVEINAEY 1470 I + + W CDLS +Y++INA+Y Sbjct: 463 IVIDLQNGAEQCTYWTCDLSREYIDINADY 492
>AK121357:Os02g0793100 | Length = 1154 Score = 33.9 bits (76), Expect = 0.37 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +1 Query: 871 EMVRTSVSRSFNQITVDGDTSTNDCVIAMASGLSGLSDILTH 996 +MV + + + QI GDT+ +D V + A L G+SDI++H Sbjct: 261 KMVASGMVNTLRQIAKPGDTTIDDSVESSAEKLVGVSDIISH 302
>Os05g0582000:Os05g0582000 | Length = 297 Score = 33.1 bits (74), Expect = 0.64 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Frame = +1 Query: 868 REMVRTSVSRSFNQITVDGDTSTNDCVIAMASGLSGLSDILTHDSAEAQQLQACLDAVMQ 1047 +++ R +V + + +T D D + +A + LS L H +++ + A +AV + Sbjct: 110 KQVTRVTVRMAGHNLTDDDDATVIAAGVAPGEYVISLSPRLMHPASD-KAADAVANAVRR 168 Query: 1048 GLAKSIAWDGEGA--TCLIEVTVTGANNEADAAK 1143 +A+ WDG GA + E V ++ ADA + Sbjct: 169 AVARMWLWDGRGAAPARVTEAMVDYLSSGADAVE 202
>Os03g0351300:Os03g0351300 | Length = 696 Score = 32.7 bits (73), Expect = 0.83 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 13/47 (27%) Frame = +3 Query: 222 ADPPSRRPMEAGRRRCHGGEGV*G-------------RGHLRRPARQ 323 A PP RRP + GRR GG G G RGH RRP R+ Sbjct: 233 AGPPRRRPEQGGRRGGGGGGGGGGGGGGEAVRGAPLRRGHRRRPRRE 279
>Os03g0740200:Os03g0740200 | Length = 170 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +1 Query: 196 TAEGYISAAPILLPDGPWKQVEGGVTAAKGFKAAGIYGG 312 +A G +AA ++L DG ++ GG A++ KAAG GG Sbjct: 19 SASGEATAARVVLADGALRRFPGGTRASQAVKAAGGGGG 57
>AK108192:Os07g0587200 | Length = 305 Score = 30.0 bits (66), Expect = 5.4 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Frame = -1 Query: 1588 LQYDTVFRVQLHRKGTQTNEDNGCVFRNAVFMKNTNFTLCIQHLFLHTYNLGHNP-MPFQ 1412 L Y V + +G T E+ V N N T HLF+H L NP +P + Sbjct: 11 LMYTIVDHYLQNHRGKLTEEEKSRV------CYNVNCTKLSHHLFMH---LVQNPRLPLR 61 Query: 1411 CLLQSQLI-----HQYLLYHGCHQH 1352 ++Q+ L+ H +L G H H Sbjct: 62 FVVQAMLVEQLHSHHSMLLSGGHHH 86
>AK107576:Os07g0619500 | Length = 329 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -3 Query: 251 FHGPSGRRIGAAEMYPSAVEAEQTTLLLGDGELIRSGRCGSGARQWK 111 F G G GA + YPS+ + +T+++ G CGSG+R+W+ Sbjct: 167 FRGGGGG--GADDEYPSSPPSPRTSMMRG---------CGSGSRKWR 202
>AK106997:Os01g0677000 | Length = 624 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -3 Query: 266 PPSTCFHGPSGRRIGAAEMYPSAVEAEQTTLLLGDGELIRSGRCGSGA 123 PP C P ++ GA + + AVE + T L +++ C SGA Sbjct: 146 PPGRCRPDPRSKQPGAMDCWAHAVEFDYNTGALRSLKIVTDTWCSSGA 193
>AK072031:Os07g0619500 | Length = 329 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -3 Query: 251 FHGPSGRRIGAAEMYPSAVEAEQTTLLLGDGELIRSGRCGSGARQWK 111 F G G GA + YPS+ + +T+++ G CGSG+R+W+ Sbjct: 167 FRGGGGG--GADDEYPSSPPSPRTSMMRG---------CGSGSRKWR 202
>AK103808:Os01g0104000 | Length = 555 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -1 Query: 1732 SGQHPPLSIKNREGWQTIFTWCSKILQ 1652 SG+ P S+++ GWQTIF W + ++Q Sbjct: 448 SGRRPTQSVES-VGWQTIFEWATPLVQ 473
>AK072087:Os01g0104000 | Length = 554 Score = 29.6 bits (65), Expect = 7.0 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -1 Query: 1732 SGQHPPLSIKNREGWQTIFTWCSKILQ 1652 SG+ P S+++ GWQTIF W + ++Q Sbjct: 447 SGRRPTQSVES-VGWQTIFEWATPLVQ 472
>AK111743:Os06g0275500 | Length = 896 Score = 29.3 bits (64), Expect = 9.2 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Frame = -2 Query: 606 LTNDTSGLDQYVICAHIQKLGNSFRTIHCILISCITSGCICLTSINQHS----TSCF-G* 442 LTN T ++Y C + K N FR HC C + C C + + +C+ G Sbjct: 663 LTNGTC-CEKYCGCPKMCK--NRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGC 719 Query: 441 SKDTLAIQNRRSSNNIC 391 TL + N+R N C Sbjct: 720 GDGTLGVPNQRGDNYEC 736
>AK105545:Os05g0304900 | Length = 480 Score = 29.3 bits (64), Expect = 9.2 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 1/142 (0%) Frame = +1 Query: 220 APILLPDGPWKQVEGGVTAAKGFKAAGIYGGLRAKGQKPDLALVACDVDATVAGSFTTNV 399 AP+L G W +++G TA K + A Q ALV D + + G FT N Sbjct: 3 APLLFWHG-WVKIDGPTTAHVKAKILTL---ANAASQCLGTALVRNDCWSFLKGGFTLNS 58 Query: 400 VAAAPVLYCKRVLTSSKTARAVLINAGQANAATGDAGYQDAVDSAEAVAK-LLNVSTNDI 576 + VLY + T+S A + I + + + Q D + K +NV D Sbjct: 59 ASETSVLYFQ---TASPNASTISIRSASLQPFSPEQWNQHREDRIQLNRKRFVNVHVAD- 114 Query: 577 LIQSTGVIGQRIKREALINSLP 642 + V+G ++ + P Sbjct: 115 -SNGSRVVGAKVAVHQITRDFP 135
>AK100709:Os02g0700000 | Length = 827 Score = 29.3 bits (64), Expect = 9.2 Identities = 23/61 (37%), Positives = 28/61 (45%) Frame = +1 Query: 277 AKGFKAAGIYGGLRAKGQKPDLALVACDVDATVAGSFTTNVVAAAPVLYCKRVLTSSKTA 456 AK K +GI+GGL G P LV C V A VA + V P+ RV +S Sbjct: 768 AKAHKQSGIFGGLIKPGGIP---LVTC-VPAKVAFTRILEAVGRPPLAVAHRVRMASPAL 823 Query: 457 R 459 R Sbjct: 824 R 824 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 47,257,590 Number of extensions: 1021907 Number of successful extensions: 3533 Number of sequences better than 10.0: 16 Number of HSP's gapped: 3522 Number of HSP's successfully gapped: 16 Length of query: 583 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 477 Effective length of database: 11,155,509 Effective search space: 5321177793 Effective search space used: 5321177793 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
