| Clone Name | FLbaf63d21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT835749.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI027J24, full insert sequence Length = 731 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 117 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 176 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 177 gttctctgcatcatctgccgctag 200
>emb|CT835746.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI020F16, full insert sequence Length = 431 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 144 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 203 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 204 gttctctgcatcatctgccgctag 227
>emb|CT835743.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI011O20, full insert sequence Length = 398 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 111 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 170 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 171 gttctctgcatcatctgccgctag 194
>emb|CT835730.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA016H20, full insert sequence Length = 473 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 186 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 245 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 246 gttctctgcatcatctgccgctag 269
>emb|CT835729.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA015H21, full insert sequence Length = 473 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 186 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 245 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 246 gttctctgcatcatctgccgctag 269
>dbj|AK243174.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100036G16, full insert sequence Length = 491 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 204 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 263 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 264 gttctctgcatcatctgccgctag 287
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 17457052 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 17456993 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 17456992 gttctctgcatcatctgccgctag 17456969
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 190 atggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggtc 249 |||||||||||| ||||||| || ||||||||||||||||||||| | ||| ||||||| Sbjct: 86047 atggagttcgtgttgatcatctcgctgccgctcctcatcctgatcataatcgtcgcggtg 85988 Query: 250 gtcctctgcatcgtctgccgctag 273 || ||||||||| ||||||||||| Sbjct: 85987 gttctctgcatcatctgccgctag 85964
>gb|AY105713.1| Zea mays PCO082740 mRNA sequence Length = 553 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 189 gatggagttcgtgctgatcatatccctgccgctcctcatcctgatcctcatcatcgcggt 248 ||||||||||||||| ||||| || |||||||| ||||| || ||| ||||| |||| || Sbjct: 135 gatggagttcgtgctcatcatctcgctgccgctgctcatactcatcatcatcgtcgccgt 194 Query: 249 cgtcctctgcatcgtctgccgctaggc 275 ||||||||||||| ||||||||||||| Sbjct: 195 cgtcctctgcatcatctgccgctaggc 221
>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete sequence Length = 189848 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 527 aaaatagcaaattcccttcctgct 550 |||||||||||||||||||||||| Sbjct: 88796 aaaatagcaaattcccttcctgct 88819
>gb|AC190258.1| Pan troglodytes chromosome 7 clone CH251-12C9, complete sequence Length = 178224 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 taaaaaatagcaaattcccttcc 546 ||||||||||||||||||||||| Sbjct: 170719 taaaaaatagcaaattcccttcc 170741
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 gctcctcccctccgtctccctcc 109 ||||||||||||||||||||||| Sbjct: 3440814 gctcctcccctccgtctccctcc 3440792
>ref|NM_115953.1| Arabidopsis thaliana unknown protein (AT3G60890) mRNA, complete cds Length = 318 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 373 aaaaagaaagctcttctcctccaccat 399 ||||||||||||||||| ||||||||| Sbjct: 223 aaaaagaaagctcttcttctccaccat 249
>ref|XM_453790.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D16544g predicted mRNA Length = 2079 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gctcctcatcctgatcctcatcatcgc 245 |||||||||| |||||||||||||||| Sbjct: 142 gctcctcatcttgatcctcatcatcgc 116
>gb|AC079756.4| Homo sapiens BAC clone RP11-108J15 from 7, complete sequence Length = 168347 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 taaaaaatagcaaattcccttcc 546 ||||||||||||||||||||||| Sbjct: 159801 taaaaaatagcaaattcccttcc 159823
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gctcctcatcctgatcctcatcatcgc 245 |||||||||| |||||||||||||||| Sbjct: 1397519 gctcctcatcttgatcctcatcatcgc 1397493
>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21 Length = 107865 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 373 aaaaagaaagctcttctcctccaccat 399 ||||||||||||||||| ||||||||| Sbjct: 98377 aaaaagaaagctcttcttctccaccat 98351
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 219 gctcctcatcctgatcctcatcatcgcggtcgtc 252 |||||||||||||||| || ||||||| |||||| Sbjct: 6280816 gctcctcatcctgatcgtcgtcatcgccgtcgtc 6280783
>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains the 3' end of a novel gene and the gene for a novel actin like protein (LOC81569), complete sequence Length = 154028 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 583 gtctcatcttatttttttacta 604 |||||||||||||||||||||| Sbjct: 69209 gtctcatcttatttttttacta 69230
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence Length = 172914 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 508 atgatatatgtggctgtaaaaa 529 |||||||||||||||||||||| Sbjct: 92973 atgatatatgtggctgtaaaaa 92952
>dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1303B4 Length = 173872 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 508 atgatatatgtggctgtaaaaa 529 |||||||||||||||||||||| Sbjct: 23714 atgatatatgtggctgtaaaaa 23735
>emb|AM236086.1| Rhizobium leguminosarum bv. viciae plasmid pRL12 complete genome, strain 3841 Length = 870021 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 219 gctcctcatcctgatcctcatcatc 243 |||||||||||||||||||| |||| Sbjct: 541429 gctcctcatcctgatcctcaccatc 541405
>gb|AC189479.1| Brassica rapa subsp. pekinensis clone KBrB081M20, complete sequence Length = 134187 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 aagtctcatcttattttttta 601 ||||||||||||||||||||| Sbjct: 97712 aagtctcatcttattttttta 97692
>emb|CT476815.9| Zebrafish DNA sequence from clone CH73-339D2 in linkage group 18, complete sequence Length = 61080 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ctcatcctgatcctcatcatc 243 ||||||||||||||||||||| Sbjct: 55299 ctcatcctgatcctcatcatc 55279
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ctcctcccctccgtctccctc 108 ||||||||||||||||||||| Sbjct: 83963 ctcctcccctccgtctccctc 83983
>gb|AY211064.1| Tribolium castaneum strain cSM microsatellite sequence Length = 289 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ctcctcatcctgatcctcatcatcg 244 ||||||||||| ||||||||||||| Sbjct: 121 ctcctcatcctcatcctcatcatcg 145
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ctcctcatcctgatcctcatc 240 ||||||||||||||||||||| Sbjct: 1154214 ctcctcatcctgatcctcatc 1154194
>emb|CR762488.16| Zebrafish DNA sequence from clone DKEY-266J7 in linkage group 18, complete sequence Length = 154489 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ctcatcctgatcctcatcatc 243 ||||||||||||||||||||| Sbjct: 2624 ctcatcctgatcctcatcatc 2604
>ref|XM_689104.1| PREDICTED: Danio rerio similar to aczonin (LOC565842), mRNA Length = 7230 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ctcatcctgatcctcatcatc 243 ||||||||||||||||||||| Sbjct: 3636 ctcatcctgatcctcatcatc 3616
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 tctccagcagatcgaggaggccagg 144 |||||||||||||||||||| |||| Sbjct: 152657 tctccagcagatcgaggaggacagg 152633
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 tcatcatcgcggtcgtcctct 256 ||||||||||||||||||||| Sbjct: 6790872 tcatcatcgcggtcgtcctct 6790852
>emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M3, complete sequence Length = 51166 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 tttttttactagcttttcttc 614 ||||||||||||||||||||| Sbjct: 16417 tttttttactagcttttcttc 16397
>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete sequence Length = 174305 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 aagtctcatcttattttttta 601 ||||||||||||||||||||| Sbjct: 175 aagtctcatcttattttttta 155
>emb|AL627093.17| Mouse DNA sequence from clone RP23-450P8 on chromosome 4, complete sequence Length = 169621 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 aagtctcatcttattttttta 601 ||||||||||||||||||||| Sbjct: 167796 aagtctcatcttattttttta 167776
>emb|X15730.1|DMACT5CA Drosophila melanogaster DNA actin 5C gene 5'-region Length = 2452 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 gtcgtcctctgcatcgtctgc 267 ||||||||||||||||||||| Sbjct: 1571 gtcgtcctctgcatcgtctgc 1551
>gb|CP000487.1| Campylobacter fetus subsp. fetus 82-40, complete genome Length = 1773615 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gtaaaaaatagcaaattccc 542 |||||||||||||||||||| Sbjct: 461861 gtaaaaaatagcaaattccc 461880
>emb|CT831261.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA021E05, full insert sequence Length = 1102 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 212 ctctgctcctcccctccgtc 231
>ref|NM_001047473.1| Caenorhabditis elegans F20D12.1a (F20D12.1) mRNA, complete cds Length = 3494 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 aaagtctcatcttatttttt 599 |||||||||||||||||||| Sbjct: 3211 aaagtctcatcttatttttt 3230
>ref|NM_001068104.1| Oryza sativa (japonica cultivar-group) Os08g0332700 (Os08g0332700) mRNA, complete cds Length = 2141 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 154 ctctgctcctcccctccgtc 173
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatcatcgcggt 248 |||||| ||||||||||||| ||||||| Sbjct: 2169167 tcctcaacctgatcctcatcgtcgcggt 2169194
>ref|XR_024226.1| PREDICTED: Pan troglodytes similar to mind bomb (LOC455331), mRNA Length = 9508 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2417 ctgcactcttcttctctgcc 2398
>gb|AC145798.3| Xenopus tropicalis clone CH216-53L7, complete sequence Length = 156462 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 589 tcttatttttttactagcttttct 612 |||||||||||| ||||||||||| Sbjct: 61222 tcttatttttttcctagcttttct 61199
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgatcctcatcatcgcg 246 |||||||||||||||||||| Sbjct: 7596102 tcctgatcctcatcatcgcg 7596083
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 13993874 tcctcatcctgatcctcatc 13993893
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 14241739 tcctcatcctgatcctcatc 14241758 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatcatcg 244 |||||||||| ||||||||||||| Sbjct: 14428475 tcctcatcctcatcctcatcatcg 14428498
>gb|AC145820.20| Cicer arietinum strain WR-315, cultivar clone cpchlor map chloroplast, complete sequence Length = 125320 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 18382 tcctcatcctgatcctcatc 18401 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 18394 tcctcatcctgatcctcatc 18413 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 18406 tcctcatcctgatcctcatc 18425
>ref|XM_001092086.1| PREDICTED: Macaca mulatta similar to mindbomb homolog 1 (LOC699340), mRNA Length = 3253 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2281 ctgcactcttcttctctgcc 2262
>ref|XM_362031.1| Magnaporthe grisea 70-15 hypothetical protein (MG04476.4) partial mRNA Length = 1458 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 atcctcatcatcgcggtcgtcctc 255 |||||||||||||| ||||||||| Sbjct: 702 atcctcatcatcgctgtcgtcctc 679
>gb|BC033115.1| Homo sapiens mindbomb homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:3350926), **** WARNING: chimeric clone **** Length = 4108 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2234 ctgcactcttcttctctgcc 2215
>gb|BC014186.2| Homo sapiens mindbomb homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:4634376), **** WARNING: chimeric clone **** Length = 4108 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2234 ctgcactcttcttctctgcc 2215
>ref|NM_111144.2| Arabidopsis thaliana ATP binding / histidine-tRNA ligase/ tRNA ligase (AT3G02760) mRNA, complete cds Length = 1669 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 aagctcttctcctccaccatttct 403 |||| ||||||||||||||||||| Sbjct: 728 aagcccttctcctccaccatttct 705
>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ctcctcccctccgtctccct 107 |||||||||||||||||||| Sbjct: 130674 ctcctcccctccgtctccct 130693
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 138249 tcctcatcctgatcctcatc 138268
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 82126 tcctcatcctgatcctcatc 82145
>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence Length = 189116 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatcatcg 244 |||||||||| ||||||||||||| Sbjct: 73227 tcctcatcctcatcctcatcatcg 73250
>gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complete sequence Length = 165489 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tcctcatcctgatcctcatcatcg 244 |||||||||| ||||||||||||| Sbjct: 150122 tcctcatcctcatcctcatcatcg 150145
>gb|AC149073.2| Sequence of an X. tropicalis BAC clone containing the bambi gene, complete sequence Length = 75688 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 589 tcttatttttttactagcttttct 612 |||||||||||| ||||||||||| Sbjct: 24754 tcttatttttttcctagcttttct 24777
>gb|BC022403.1| Homo sapiens mindbomb homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:4701157), complete cds Length = 2113 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 633 ctgcactcttcttctctgcc 614
>ref|NM_020774.2| Homo sapiens mindbomb homolog 1 (Drosophila) (MIB1), mRNA Length = 9308 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2257 ctgcactcttcttctctgcc 2238
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tgctcctcccctccgtctccctcc 109 |||||||||||||| ||||||||| Sbjct: 197644 tgctcctcccctccttctccctcc 197621
>gb|AY147849.1| Homo sapiens MINDBOMB (MIB) mRNA, complete cds Length = 7458 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2530 ctgcactcttcttctctgcc 2511
>gb|AC132464.3| Mus musculus BAC clone RP23-53K19 from chromosome 18, complete sequence Length = 175801 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ttatttttttactagctttt 610 |||||||||||||||||||| Sbjct: 175421 ttatttttttactagctttt 175440
>gb|AC122370.4| Mus musculus BAC clone RP23-459B8 from chromosome 8, complete sequence Length = 176045 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 508 atgatatatgtggctgtaaaaaat 531 |||||||||||||||||| ||||| Sbjct: 109696 atgatatatgtggctgtagaaaat 109719
>gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosome 9, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctcctccaccatttctactt 407 |||||||||||||||||||| Sbjct: 35385 ctcctccaccatttctactt 35366
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 aagctcttctcctccaccatttct 403 |||| ||||||||||||||||||| Sbjct: 87847 aagcccttctcctccaccatttct 87824
>ref|XM_547643.2| PREDICTED: Canis familiaris similar to mindbomb homolog 1 (LOC490521), mRNA Length = 3725 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2257 ctgcactcttcttctctgcc 2238
>ref|NM_206294.1| Drosophila melanogaster CG33275-RA, transcript variant A (CG33275), mRNA Length = 6347 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgatcctcatcatcgcg 246 |||||||||||||||||||| Sbjct: 555 tcctgatcctcatcatcgcg 536
>gb|AC098888.4| Mus musculus BAC clone RP23-122N8 from 8, complete sequence Length = 229247 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 tctcatcttatttttttact 603 |||||||||||||||||||| Sbjct: 67513 tctcatcttatttttttact 67494
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 ttatttttttactagctttt 610 |||||||||||||||||||| Sbjct: 73916 ttatttttttactagctttt 73935
>gb|U40933.1| Caenorhabditis elegans cosmid F20D12, complete sequence Length = 37255 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 aaagtctcatcttatttttt 599 |||||||||||||||||||| Sbjct: 29769 aaagtctcatcttatttttt 29788
>dbj|AK091266.1| Homo sapiens cDNA FLJ33947 fis, clone CTONG2018343, weakly similar to ANKYRIN 2 Length = 3434 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 1942 ctgcactcttcttctctgcc 1923
>dbj|AK075157.1| Homo sapiens cDNA FLJ90676 fis, clone PLACE1005682, weakly similar to B-CELL LYMPHOMA 3-ENCODED PROTEIN Length = 1871 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 379 ctgcactcttcttctctgcc 360
>gb|AC103987.5| Homo sapiens chromosome 18, clone RP11-268I9, complete sequence Length = 163972 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 74262 ctgcactcttcttctctgcc 74243
>gb|AC023675.4| Drosophila melanogaster 3L BAC RP98-3I22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178338 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgatcctcatcatcgcg 246 |||||||||||||||||||| Sbjct: 19072 tcctgatcctcatcatcgcg 19053
>ref|XM_813666.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506755.190) partial mRNA Length = 2334 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ctcctcatcctgatcctcatcatc 243 ||||||||||| |||||||||||| Sbjct: 231 ctcctcatcctcatcctcatcatc 208
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 14724618 ctctgctcctcccctccgtc 14724599
>gb|AC010113.6| Drosophila melanogaster 3L BAC RPCI98-10H23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182898 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcctgatcctcatcatcgcg 246 |||||||||||||||||||| Sbjct: 136869 tcctgatcctcatcatcgcg 136850
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 96789 tcctcatcctgatcctcatc 96770
>gb|AY211269.1| Campylobacter fetus strain 23D sap gene locus, partial sequence Length = 65865 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gtaaaaaatagcaaattccc 542 |||||||||||||||||||| Sbjct: 27747 gtaaaaaatagcaaattccc 27766
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gactgcactcttcttctctg 21 |||||||||||||||||||| Sbjct: 67726 gactgcactcttcttctctg 67707
>gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete sequence Length = 148616 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcctccaccatttctacttt 408 |||||||||||||||||||| Sbjct: 47194 tcctccaccatttctacttt 47175
>emb|CR858479.1| Pongo pygmaeus mRNA; cDNA DKFZp468P1727 (from clone DKFZp468P1727) Length = 1111 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 atatatgtggctgtaaaaaa 530 |||||||||||||||||||| Sbjct: 959 atatatgtggctgtaaaaaa 978
>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0030G18 Length = 167557 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 16705 ctctgctcctcccctccgtc 16686
>emb|CR749635.1| Homo sapiens mRNA; cDNA DKFZp686I0769 (from clone DKFZp686I0769) Length = 7715 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 1677 ctgcactcttcttctctgcc 1658
>gb|AY149908.1| Homo sapiens mind bomb (MIB) mRNA, complete cds Length = 3021 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2257 ctgcactcttcttctctgcc 2238
>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1224_G08 Length = 113496 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 69197 ctctgctcctcccctccgtc 69178
>emb|BX548068.13| Zebrafish DNA sequence from clone DKEYP-53E7 in linkage group 10, complete sequence Length = 177449 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gactgcactcttcttctctg 21 |||||||||||||||||||| Sbjct: 134644 gactgcactcttcttctctg 134663
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gactgcactcttcttctctg 21 |||||||||||||||||||| Sbjct: 63392 gactgcactcttcttctctg 63373
>dbj|AK109737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C11, full insert sequence Length = 2008 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 189 ctctgctcctcccctccgtc 208
>dbj|AK099878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111I02, full insert sequence Length = 2283 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 190 ctctgctcctcccctccgtc 209
>dbj|AK099417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006H18, full insert sequence Length = 1956 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 131 ctctgctcctcccctccgtc 150
>dbj|AK067028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091B08, full insert sequence Length = 2142 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctctgctcctcccctccgtc 102 |||||||||||||||||||| Sbjct: 155 ctctgctcctcccctccgtc 174
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 234 cctcatcatcgcggtcgtcctctgcatcgtct 265 ||||||| || ||||||| ||||||||||||| Sbjct: 1169999 cctcatcgtctcggtcgtactctgcatcgtct 1169968
>gb|BC110582.1| Homo sapiens mindbomb homolog 1 (Drosophila), mRNA (cDNA clone MGC:129660 IMAGE:40008395), complete cds Length = 3021 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2257 ctgcactcttcttctctgcc 2238
>gb|BC110581.1| Homo sapiens mindbomb homolog 1 (Drosophila), mRNA (cDNA clone MGC:129659 IMAGE:40008394), complete cds Length = 3021 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 2257 ctgcactcttcttctctgcc 2238
>gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, complete sequence Length = 197288 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tttctgttctgtcactgtgg 426 |||||||||||||||||||| Sbjct: 81606 tttctgttctgtcactgtgg 81625
>gb|AF039231.1|AF039231 Drosophila melanogaster fruitless class I male isoform (fru) mRNA, complete cds Length = 3819 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 3275 tcctcatcctgatcctcatc 3256
>gb|U72492.1|DMU72492 Drosophila melanogaster fruitless class I female isoform (fru) mRNA, complete cds Length = 5409 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcctcatcctgatcctcatc 240 |||||||||||||||||||| Sbjct: 4865 tcctcatcctgatcctcatc 4846
>dbj|AB037744.1| Homo sapiens mRNA for KIAA1323 protein, partial cds Length = 5356 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcactcttcttctctgcc 23 |||||||||||||||||||| Sbjct: 428 ctgcactcttcttctctgcc 409
>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202716 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tgctcctcccctccgtctccctcc 109 |||||||||||||| ||||||||| Sbjct: 106174 tgctcctcccctccttctccctcc 106151 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 125,992,275 Number of extensions: 7389047 Number of successful extensions: 155619 Number of sequences better than 10.0: 100 Number of HSP's gapped: 155619 Number of HSP's successfully gapped: 103 Length of query: 630 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 608 Effective length of database: 18,508,616,841 Effective search space: 11253239039328 Effective search space used: 11253239039328 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)