>LOC_Os03g08270:12003.t00685:unspliced-genomic ataxin-2 C-terminal region family protein, expressed|
Length = 6992
Score = 220 bits (475), Expect(8) = 0.0
Identities = 89/136 (65%), Positives = 103/136 (75%)
Frame = +3 / +1
Query: 831 ENKVDGRLNQNLRXXXXXXXXXXXXXXYAQNGLANYNKEAFGLPNSPYRSHSAILTDDII 1010
+NKVDGR NQNLR Y QNGLANYNKEAFGL N+ YRSHSA+L DDI+
Sbjct: 4519 QNKVDGRFNQNLRSLSFGHSSPPSPASYGQNGLANYNKEAFGLANNTYRSHSAVLADDIL 4698
Query: 1011 SPSAGRERLSLDSSRGRYKTTNLPVTSLGSSRGSHLLAGPYNGNHDMISNNTLQNIAGVQ 1190
SPSAGRE +SLD+ RGRY TTNLPV+ LGSSRGS +A +NGNHD++SNNTLQNIAGVQ
Sbjct: 4699 SPSAGREHISLDAPRGRYNTTNLPVSGLGSSRGSQFMASSFNGNHDIVSNNTLQNIAGVQ 4878
Query: 1191 TGPTWLDTDATANMFL 1238
TGP WL+ D ++ L
Sbjct: 4879 TGPAWLEADTAGSVEL 4926
Score = 192 bits (413), Expect(8) = 0.0
Identities = 81/96 (84%), Positives = 87/96 (90%)
Frame = +3 / +3
Query: 1341 RIQMPELQGLIQEQNPAIDLCGLHASEAMHVLNNELNNRRKIARSTGRRLQAIIISNPRT 1520
R QMPE QGL+QEQN IDLCGLH SEA+H LN ELNNRRKIARSTGRRLQ IIIS+ RT
Sbjct: 6417 RFQMPEFQGLVQEQNTPIDLCGLHVSEAIHALNYELNNRRKIARSTGRRLQVIIISSTRT 6596
Query: 1521 PARLTAAIEQYLLEHGLQYTQAQPGLFRVLLQ*SSR 1628
PARLTAA+EQYLLEHG+QYTQAQPGLFRVLLQ*S+R
Sbjct: 6597 PARLTAAVEQYLLEHGIQYTQAQPGLFRVLLQ*SNR 6704
Score = 142 bits (304), Expect(8) = 0.0
Identities = 62/87 (71%), Positives = 70/87 (80%)
Frame = +1 / +3
Query: 349 LYQATLMKKHIGIGNNSFQMISPLISTFLAKMRLLDLTVFHSRACQ*MMALVLHYFLQTR 528
LYQ TLMKKHIG G NSFQMI PLIS F KMR LDL +FHS ACQ*M+ALVLHYFLQTR
Sbjct: 2418 LYQVTLMKKHIGTGKNSFQMILPLISKFWDKMRCLDLIIFHSLACQ*MIALVLHYFLQTR 2597
Query: 529 HQECSTMLLHLLGTR*VHEGSLNFLAK 609
H+ C+T+LL LLGT * H+ +FLA+
Sbjct: 2598 HRICNTVLLLLLGTL*AHDQRSSFLAQ 2678
Score = 107 bits (228), Expect(8) = 0.0
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +3 / +2
Query: 606 QEQQQATIMSPTASTMSPTAAPWVKTVRNGGQYGTNRRDASHYNGDSSIGSPLQS 770
+EQ +ATIMSPTAS MSPTAAPWVKTVRNG QY NRRDASHYNGDSSIG L S
Sbjct: 2687 EEQSRATIMSPTASAMSPTAAPWVKTVRNGVQYNANRRDASHYNGDSSIGIVLIS 2851
Score = 79.4 bits (167), Expect(8) = 0.0
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +2 / +1
Query: 152 ASAH*QDVH*RKENKFDKQDDFVKS*CGRICSFMP*MCE*CFKQIGHNQDSCFRVLKGNQ 331
+SA+ Q VH R+ KFDKQD VKS C RIC+F+P + +*CFK I H QD C R+L+ +
Sbjct: 2218 SSAYHQYVHRRENIKFDKQDHCVKSKCTRICTFIPQIYQ*CFK*IRHIQDFCIRILQRHY 2397
Query: 332 RRPTRVC 352
R TR C
Sbjct: 2398 CRSTRSC 2418
Score = 40.9 bits (83), Expect(8) = 0.0
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 1242 KDEVHDFASLRHALLEQ 1292
KDE HDFASLRHALLEQ
Sbjct: 5024 KDEAHDFASLRHALLEQ 5074
Score = 39.1 bits (79), Expect(8) = 0.0
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3 / +3
Query: 768 SDAYYRNRRSFRSSMDIMTQLE 833
+DAY+ +RRSF S+MDIM+QLE
Sbjct: 2931 TDAYFGSRRSFSSTMDIMSQLE 2996
Score = 28.1 bits (55), Expect(8) = 0.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 1767 FFCRQIRCKICGIR 1808
FF + RCKICGIR
Sbjct: 6870 FFVSKKRCKICGIR 6911
Score = 207 bits (447), Expect(9) = 0.0
Identities = 99/132 (75%), Positives = 103/132 (78%)
Frame = -3 / -1
Query: 1228 LAVASVSSQVGPV*TPAMFCSVLFEIIS*LPLYGPANR*EPLLEPRLVTGKLVVLYLPLE 1049
L S SSQ GPV*TPA+FC VLFE +S*LPL A *EPLLEPR TGKLVVLYLPL
Sbjct: 4916 LPAVSASSQAGPV*TPAIFCRVLFETMS*LPLNELAMN*EPLLEPRPETGKLVVLYLPLG 4737
Query: 1048 ESRDKRSLPAEGEIISSVSMAE*DLYGLFGRPKASLL*LARPF*AYDTGDEGLECPNDSD 869
SR+ S PAEGE ISS S AE DLY LF RPKASLL* ARPF* YD GD GLECPNDSD
Sbjct: 4736 ASREICSRPAEGESISSASTAEWDLYVLFARPKASLL*FARPF*PYDAGDGGLECPNDSD 4557
Query: 868 LRF*LSRPSTLF 833
LRF*L+RPSTLF
Sbjct: 4556 LRF*LNRPSTLF 4521
Score = 171 bits (368), Expect(9) = 0.0
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -3 / -2
Query: 1627 LLLHCSRTRKRPGCACVY*RPCSRRYCSMAAVNLAGVRGLDIMMAWSRRPVDRAIFLLLL 1448
LLLHC+RTRKRPGCACVY* PCSRRYCS AAV+LAGVR LDIM+ W RRPVDRAIF LL
Sbjct: 6703 LLLHCNRTRKRPGCACVY*MPCSRRYCSTAAVSLAGVRVLDIMITWRRRPVDRAIFRRLL 6524
Query: 1447 SSLFRTCIASLA*RPQRSIAGFCSWMRPCNSGI 1349
SS FR CIASL *RP RSI FCS RP NSGI
Sbjct: 6523 SS*FRACIASLT*RPHRSIGVFCS*TRP*NSGI 6425
Score = 160 bits (344), Expect(9) = 0.0
Identities = 68/83 (81%), Positives = 70/83 (84%)
Frame = -3 / -3
Query: 601 GNSNFPRVLSVSLTNGEAWCCILDVWFGENNEAPKPSFIDKPVSERLSGPGVSSWPRTLK 422
GNS F RVL VSL GEA CC DVWFGEN+EAP SFIDKPVSE LSGPG+SS PRTLK
Sbjct: 2670 GNSIFDRVLRVSLIKGEARCCKFDVWFGENSEAPMLSFIDKPVSEILSGPGISSCPRTLK 2491
Query: 421 SGVISSGSCCCQYRCASSSGLLG 353
SGVISSGSC CQYRCASSSGLLG
Sbjct: 2490 SGVISSGSCSCQYRCASSSGLLG 2422
Score = 86.3 bits (182), Expect(9) = 0.0
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = -2 / -2
Query: 755 SNARISIVVTSIPSVCTILSTVSYCLYPWSSSWTHSTCSGTHNSSLLLF 609
+NARISIV+ IPSVC +L T+SYC YP S SWTHS CS THNSS LF
Sbjct: 2836 TNARISIVMAGIPSVCIVLHTISYCFYPRSRSWTHSACSWTHNSSS*LF 2690
Score = 79.0 bits (166), Expect(9) = 0.0
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = -1 / -1
Query: 351 QTLVGLR*FPLRTLKQESWLCPICLKHHSHI*GMKEQILPH*DLTKSSCLSNLFSFLQWT 172
Q LV L+* R L Q+SW+C I LKHH I*GMK QIL H DLT+ SCLSNL L+WT
Sbjct: 2417 QDLVDLQ*CLWRILIQKSWMCLIYLKHH**I*GMKVQILVHLDLTQWSCLSNLMFSLRWT 2238
Query: 171 SC**ADAAI 145
**AD ++
Sbjct: 2237 Y***ADESL 2211
Score = 35.4 bits (71), Expect(9) = 0.0
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 1303 NLSCCSRSACLRLAKS*TSSF 1241
++ CSRSAC RLAKS* SSF
Sbjct: 5085 SICTCSRSACRRLAKS*ASSF 5023
Score = 32.2 bits (64), Expect(9) = 0.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / -1
Query: 833 LQLSHDVHT*PKATPVSVISI 771
LQL+HD+H+* KA P S + I
Sbjct: 2996 LQLTHDIHS*AKAAPASEVCI 2934
Score = 27.6 bits (54), Expect(9) = 0.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 1827 TVGQLIP*FRKFYNVFADKK 1768
T+ + I *FRKFYNVF +K
Sbjct: 6930 TLKEHIA*FRKFYNVFC*QK 6871
Score = 27.6 bits (54), Expect(9) = 0.0
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1 / -2
Query: 1773 KKSLIYQHYNQLFVAVSFLFCYSSLPYTVQVILFFFISS 1657
KK + Y + F YSSLPYTV F SS
Sbjct: 6874 KKKALLYEYYNSYFKFLFC*YYSSLPYTVVQGSILFCSS 6758
Score = 199 bits (429), Expect(6) = e-151
Identities = 92/144 (63%), Positives = 106/144 (73%)
Frame = +1 / +2
Query: 832 RIKLMDDSIRISGHCHLDIQVPHHQYHMLKMVLPTITKRLLVCRTVHTDLIQPYSQMI*F 1011
RIKLMDDSIRI GHC LDIQV HHQ+HM+KMVL TITK+LLV +T+H D Q YSQMI F
Sbjct: 4520 RIKLMDDSIRI*GHCRLDIQVLHHQHHMVKMVLQTITKKLLVWQTIHIDPTQLYSQMIYF 4699
Query: 1012 HLQLAGNVYP*ILQGGGTRQLICLLLVLVQAEALICWLGHTMVIMI*SQTTHCKTLLEFK 1191
LQL GN++ +L GGGT QLICL LVLVQAEAL W H+M IM *SQTT CK LEFK
Sbjct: 4700 PLQLVGNIFLWMLLGGGTIQLICLFLVLVQAEALSSWQAHSMAIMT*SQTTPCKI*LEFK 4879
Query: 1192 RDQLGSTQMLRLTCFWKRTKFMIL 1263
+D LG +L++ + FM L
Sbjct: 4880 QDLLGLKLILQVVLNYNACFFMDL 4951
Score = 184 bits (396), Expect(6) = e-151
Identities = 72/96 (75%), Positives = 80/96 (83%)
Frame = +3 / +2
Query: 315 SSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMND 494
S I+ Q +PSNPDEEAHRYWQ+QLPDDITPDF VLGQDE PGPD++SLTGLS+ND
Sbjct: 2384 SKDTIADQQDPVIPSNPDEEAHRYWQEQLPDDITPDFKVLGQDEMPGPDNISLTGLSIND 2563
Query: 495 GFGASLFSPNQTSRMQHHASPFVRDTLSTRGKFEFP 602
GASLFSPNQTS +QH ASPF+RDTLSTR K EFP
Sbjct: 2564 SIGASLFSPNQTSNLQHRASPFIRDTLSTRSKIEFP 2671
Score = 130 bits (278), Expect(6) = e-151
Identities = 60/110 (54%), Positives = 72/110 (65%)
Frame = +2 / +2
Query: 1349 NARVARPHPGAESCNRPLWSSCK*GDARPEQ*TQQQEEDRPIHGPPAPGHHNI*PTYPCE 1528
NAR++RP GA+ N P+WSS K GD RPE * QQ ED IH P +PG HNI TY E
Sbjct: 6425 NARISRPGSGAKYPN*PVWSSRKRGDTRPEL*AQQPAEDCSIHRPSSPGDHNIKHTYSGE 6604
Query: 1529 VDRRHRAVSPGARPSVHAGTAGPLPRPAAVK*QGPPRCLWT*SDEMKKKR 1678
DRR RAV PGAR SV+AGTAGP P P VK*Q ++ + E ++K+
Sbjct: 6605 ADRRRRAVPPGARHSVYAGTAGPFPCPVTVK*QDGRLIMFVYTFERRRKK 6754
Score = 88.1 bits (186), Expect(6) = e-151
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = +2 / +1
Query: 608 RTAASYYYESHCKYYESNCCSMGKDSKKRWTIWYKQKGC*SLQWRF*HW 754
RT SYYYES+CK YESNC S+GK+SKK I KQKGC LQWRF*HW
Sbjct: 2689 RTVKSYYYESNCKRYESNCGSVGKNSKKWCAIQCKQKGCQPLQWRF*HW 2835
Score = 33.6 bits (67), Expect(6) = e-151
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 769 LMLITETGVALGQVWTS*LSWR 834
LM +E G AL Q+W S*+SWR
Sbjct: 2932 LMHTSEAGAALAQLWIS*VSWR 2997
Score = 26.3 bits (51), Expect(6) = e-151
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 1768 FFVGKYVVKFAELGD 1812
F K VVKFAELGD
Sbjct: 6871 FLSAKNVVKFAELGD 6915
Score = 174 bits (375), Expect(8) = e-138
Identities = 84/129 (65%), Positives = 93/129 (72%)
Frame = -1 / -2
Query: 1209 RAKLVPFELQQCFAVCCLRSYHDYHCMAQPTDESLCLNQD**QAN*LSCTSPLKNLGINV 1030
+AK V FELQ FA CCLR HD H M+ P ESLCLNQD QAN*L CTSP ++ V
Sbjct: 4897 QAKQVLFELQLYFAGCCLRLCHDCH*MSLP*TESLCLNQDQKQAN*LYCTSP*EHPEKYV 4718
Query: 1029 PCQLKVKLYHL*VWLNEICMDCSADQKPLCYSWQDHFEHMILVMRDLNVQMTVT*DSD*V 850
P QLK K+YHL V L+ I M C DQK LCYS QDHF+HM+LVM DLNVQ TVT DSD*+
Sbjct: 4717 PDQLKGKVYHLRVQLSGIYMYCLPDQKLLCYSLQDHFDHMMLVMEDLNVQTTVTSDSD*I 4538
Query: 849 VHQLYSPAE 823
VHQLYS E
Sbjct: 4537 VHQLYSANE 4511
Score = 144 bits (308), Expect(8) = e-138
Identities = 62/93 (66%), Positives = 73/93 (78%)
Frame = -2 / -1
Query: 1628 PATSLQQDAEEARLCLRVLKAVLQEILLDGGGQPRRGTWVRYYDGLEPAARGSGDLPPVV 1449
P TSL QD E+ARLCLR+L AVLQE+LLDGGGQPRR T YYD LE A GS +LPPVV
Sbjct: 6704 PVTSL*QDTEKARLCLRILNAVLQEVLLDGGGQPRRSTCA*YYDHLETTACGSSNLPPVV 6525
Query: 1448 EFIVQDVHRLTCMKTTKVDCRILLLDEALQLWH 1350
E IVQ V+RL +KTT+V+ ILLL++AL+ WH
Sbjct: 6524 ELIVQGVYRLAYVKTTQVNWGILLLNQALKFWH 6426
Score = 119 bits (255), Expect(8) = e-138
Identities = 58/86 (67%), Positives = 65/86 (75%)
Frame = -1 / -1
Query: 609 LGQEIQTSLVYLACP*QMEKHGAAFLMSGLEKIMKHQSHHSLTSP*VKDCQVQESHLGQE 430
LG E ++ +V CP* EKHG A MSGLEKI+KHQ +H LTS *VK QVQ SHL E
Sbjct: 2678 LG*ETRSLIVCSECP**KEKHGVANSMSGLEKIVKHQCYHLLTSQ*VKYYQVQASHLVPE 2499
Query: 429 R*NQG*YHLEAVVANTDVLLHQGCLV 352
*NQG*YHLEAV+A+TDVLLHQG LV
Sbjct: 2498 L*NQG*YHLEAVLASTDVLLHQGYLV 2421
Score = 75.3 bits (158), Expect(8) = e-138
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = -1 / -1
Query: 753 QC*NLHCSD*HPFCLYHIVHRFLLSLPMEQQLDS*YLQWDS***LAAVL 607
QC*NLHC+ HPFCL+ I H FLL LP E QLDS* LQ DS***L VL
Sbjct: 2834 QC*NLHCNGWHPFCLHCIAHHFLLFLPTEPQLDS*RLQLDS***LLTVL 2688
Score = 58.3 bits (121), Expect(8) = e-138
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = -2 / -2
Query: 350 RLWLVCADFL*GL*NRNLGCVRSV*SITHTSKA*RNKFYRIRI*RSRPVYQTYFPFFNGH 171
R+ L+C G * RN GCV S+*+I S+ *R KF I I*RS VYQT F+GH
Sbjct: 2416 RILLICNSVFGGS*YRNPGCV*SI*NIIDRSEG*RYKFLCIWI*RSGLVYQT*CSLFDGH 2237
Query: 170 LANEQMQ 150
++QM+
Sbjct: 2236 TDDKQMK 2216
Score = 30.4 bits (60), Expect(8) = e-138
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 1299 YPAVQEVHVLDLQNHELRP 1243
Y V E H + LQNHEL P
Sbjct: 5081 YAPVPEAHAVGLQNHELHP 5025
Score = 27.6 bits (54), Expect(8) = e-138
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 1816 TYPLIPQILQRICRQKK 1766
TY LIPQILQR KK
Sbjct: 6919 TYRLIPQILQRFLLTKK 6869
Score = 27.6 bits (54), Expect(8) = e-138
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 1745 TNYLSLYHFYSATHLCHIQ 1689
T +S ++ S THLCHIQ
Sbjct: 6846 TTAISNFYSASTTHLCHIQ 6790
Score = 189 bits (408), Expect(6) = e-108
Identities = 86/128 (67%), Positives = 94/128 (73%)
Frame = +2 / +3
Query: 824 SAGE*S*WTTQSESQVTVIWTFKSLITSIICSKWSCQL*QRGFWSAEQSIQISFSHTHR* 1003
S E*S*WT QSES+VTV+WTFKS ITSII SKWSC+L*QR FWS +Q I I S T R*
Sbjct: 4512 SLAE*S*WTIQSESEVTVVWTFKSSITSIIWSKWSCKL*QRSFWSGKQYI*IPLSCTRR* 4691
Query: 1004 YNFTFSWQGTFIPRFFKGEVQDN*FACY*SWFKQRLSSVGWAIQW*S*YDLKQHTAKHCW 1183
Y F FSW GT+ GEVQ N*FAC+ SWFKQRLS G IQW S*+ LKQH AK+ W
Sbjct: 4692 YTFPFSWSGTYFSGCS*GEVQYN*FACFWSWFKQRLSVHGKLIQWQS*HSLKQHPAKYSW 4871
Query: 1184 SSNGTNLA 1207
SSN T LA
Sbjct: 4872 SSNRTCLA 4895
Score = 118 bits (253), Expect(6) = e-108
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +2 / +1
Query: 353 TKQP**RSTSVLATTASR*YHP*FQRSWPR*DSWT*QSFTHGLVNE*WLWCFIIFSKPDI 532
TK P**RSTSVLA TASR*Y+P*FQ S R*D+WT* FTH LVN+* WCF IFSKPDI
Sbjct: 2422 TK*P**RSTSVLARTASR*YYP*FQSSGTR*DAWT**YFTHWLVNK**HWCFTIFSKPDI 2601
Query: 533 KNAAPCFSIC*GHAKYTREV*ISWP 607
+ A PCFS *GH+++T + +S P
Sbjct: 2602 EFATPCFSFY*GHSEHTIKDRVS*P 2676
Score = 70.3 bits (147), Expect(6) = e-108
Identities = 37/61 (60%), Positives = 41/61 (67%)
Frame = +1 / +1
Query: 1348 KCQSCKASSRSRILQSTFVVFMQVRRCTS*TMNSTTGGRSPDPRAAGSRPS*YLTHVPLR 1527
KCQ+ KA RS+I Q T VVF RR T *TM+STTGGR DP+A SR S*Y HV R
Sbjct: 6424 KCQNFKAWFRSKIPQLTCVVFT*ARRYTP*TMSSTTGGRLLDPQAVVSR*S*YQAHVLRR 6603
Query: 1528 G 1530
G
Sbjct: 6604 G 6606
Score = 64.8 bits (135), Expect(6) = e-108
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +1 / +3
Query: 154 ICSLARCPLKKGK*V**TGRLR*ILMR*NLFLHALDV*VMLQTDRTQPRFLFQSPQRKSA 333
IC + CP K+ *V**T LR*I M NL+LH D+ +M Q D+T P FL+Q P +
Sbjct: 2220 ICLSSVCPSKREH*V**TRPLR*IQMHKNLYLHPSDLSMMFQIDQTHPGFLYQDPPKTLL 2399
Query: 334 QTNQSLYQATLMKK 375
Q N+ L + K
Sbjct: 2400 QINKILLYQVTLMK 2441
Score = 39.1 bits (79), Expect(6) = e-108
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1 / +3
Query: 673 G*RQ*ETVDNMVQTEGMLVTTMEILAL 753
G*+Q*E V N +QTEGM TMEILAL
Sbjct: 2754 G*KQ*EMVCNTMQTEGMPAITMEILAL 2834
Score = 33.1 bits (66), Expect(6) = e-108
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2 / +2
Query: 770 *CLLQKPA*L*VKYGHHDSAG 832
*C+L+K A L*+ YG+H+SAG
Sbjct: 2933 *CILRKQAQL*LNYGYHESAG 2995
Score = 164 bits (353), Expect(5) = e-108
Identities = 86/133 (64%), Positives = 99/133 (74%)
Frame = -2 / -3
Query: 1220 SICVEPSWSRLNSSNVLQCVV*DHIMITIVWPSQQMRASA*TKTSNRQISCLVPPP*RI* 1041
SI +PS S LNSS +LQ VV*D++MI I ++RASA*TKT NRQISC+VPPP I
Sbjct: 4908 SISFKPSRSCLNSSYILQGVV*DYVMIAIE*ACHELRASA*TKTRNRQISCIVPPPRSIQ 4729
Query: 1040 G*TFPAS*R*NYIICEYG*MRSVWTVRQTKSLFVIVGKTILSI*YW**GT*MSK*Q*PEI 861
FP S*R YIICEY *+ S+ V QTKS FVIV KTIL+I* W* T*MSK Q*P+I
Sbjct: 4728 RNMFPTS*RGKYIICEYS*VGSICIVCQTKSFFVIVCKTILTI*CW*WRT*MSKRQ*PQI 4549
Query: 860 LIESSINFILQLS 822
LIESSINFIL ++
Sbjct: 4548 LIESSINFILLMN 4510
Score = 135 bits (290), Expect(5) = e-108
Identities = 62/97 (63%), Positives = 71/97 (73%)
Frame = -2 / -2
Query: 605 ARKFKLPSCT*RVPNKWRSMVLHS*CLVWRK**STKAIIH*QARE*KTVRSRSLILAKNV 426
ARK L SC VPNK RS VL CLVWRK**ST AII+*QA E* +RSR LIL++N
Sbjct: 2674 ARKLDL*SCAQSVPNKRRSTVLQIRCLVWRK**STNAIIY*QASE*NIIRSRHLILSQNF 2495
Query: 425 EIRGDIIWKLLLPIPMCFFIRVAWYRLWLVCADFL*G 315
EIRG+IIWKL LP+PMCFFIRV WY L+ + + G
Sbjct: 2494 EIRGNIIWKLFLPVPMCFFIRVTWYNRILLICNSVFG 2384
Score = 99.1 bits (210), Expect(5) = e-108
Identities = 54/116 (46%), Positives = 62/116 (53%)
Frame = -1 / -3
Query: 1695 YTVQVILFFFISSDHVHKHLGGPCYFTXXXXXXXXXXXACTEGRAPGDTARWRRSTSQGY 1516
+ V + F +S + + CYFT A TE RAPG TAR RRS S Y
Sbjct: 6771 FFVPPLFFLLLSKVYTNMMSLPSCYFTVTGHGKGPAVPAYTECRAPGGTARRRRSASPEY 6592
Query: 1515 VG*IL*WPGAGGPWIGRSSSCC*VHCSGRASPHLHEDHKGRLQDSAPG*GLATLAF 1348
V IL* PG G WI +SS+ C* H SGR SP L EDH G+L AP GL LAF
Sbjct: 6591 VCLIL*SPGDDGLWIEQSSAGC*AHSSGRVSPRLREDHTGQLGYFAPEPGLEILAF 6424
Score = 68.0 bits (142), Expect(5) = e-108
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -3 / -3
Query: 712 FVPYCPPFLTVFTHGAAVGLIVLAVGLIIVACCCS 608
F YC PFLTVFTHGAAVGLI LAVGLIIVA CS
Sbjct: 2793 FALYCTPFLTVFTHGAAVGLIALAVGLIIVALDCS 2689
Score = 26.3 bits (51), Expect(5) = e-108
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 1289 FKKCMS*TCKIMNFVL 1242
F+K M * CKIM+F+L
Sbjct: 5071 FQKRMP*ACKIMSFIL 5024
Score = 104 bits (222), Expect = 2e-21
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3 / +2
Query: 153 HLLISKMSIEERKISLINRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVSESSKEIS 332
HLLI MSIEER +SLIN+TT+LNPNA EFVPS LR ++D SNRSDT++I VS SSK+
Sbjct: 2219 HLLIISMSIEERTLSLINKTTALNPNAQEFVPSSLRSINDVSNRSDTSRISVSGSSKDTI 2398
Query: 333 ADQPESVPSNPDEEAHRYWQQQ 398
ADQ + V + +E + Q+
Sbjct: 2399 ADQQDPVIPSNPDEEAHRYWQE 2464
Score = 95.0 bits (201), Expect = 2e-18
Identities = 50/87 (57%), Positives = 57/87 (65%)
Frame = -3 / -3
Query: 415 VISSGSCCCQYRCASSSGLLGTDSGWSALISFEDSETGILVVSDLFEASLTHLRHEGTNS 236
+ S C +SS L T S SA++S ED +T IL VSDLFE SL LR EGTNS
Sbjct: 2481 ISSGSCSCQYRCASSSGLLGITGSC*SAIVSLEDPDTEILDVSDLFETSLIDLRDEGTNS 2302
Query: 235 TALGFNEVVLFIKLIFLSSMDILLMSR 155
A GFN VVLFIKL LSSMDIL++SR
Sbjct: 2301 CAFGFNAVVLFIKLNVLSSMDILMISR 2221
>LOC_Os06g09890:12006.t00867:unspliced-genomic smr domain containing protein, expressed|
Length = 5124
Score = 95.9 bits (203), Expect(5) = 2e-36
Identities = 43/104 (41%), Positives = 63/104 (60%)
Frame = +3 / +2
Query: 198 LINRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEA 377
L N+ T+LNPNA EFVPSC+R ++S SD +K + S K I S +N D+EA
Sbjct: 1979 LPNKVTALNPNAAEFVPSCIRPSFESSAVSDVSKADLRASGKTILDRSESSKSNNSDDEA 2158
Query: 378 HRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGAS 509
H++W++QLPDDI PDF+ ++ P SL+ L+ +G +
Sbjct: 2159 HQFWRKQLPDDIIPDFSFEKIEQEPEELSLAGLSLNAPPFYGTT 2290
Score = 52.4 bits (108), Expect(5) = 2e-36
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 1524 ARLTAAIEQYLLEHGLQYTQAQPGLFRVLL 1613
ARL A+EQ+LLE GL YTQAQPGL RV++
Sbjct: 4800 ARLPIAVEQFLLEEGLHYTQAQPGLLRVVV 4889
Score = 47.8 bits (98), Expect(5) = 2e-36
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 1392 IDLCGLHASEAMHVLNNELNNRRKIARSTGRRLQAII 1502
IDL GLH +EA+H+L EL + AR+TG R+Q +I
Sbjct: 4650 IDLHGLHVNEAIHILKVELGTLKSTARATGERMQVMI 4760
Score = 25.8 bits (50), Expect(5) = 2e-36
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3 / +2
Query: 768 SDAYYRNRRSFRSSMDIMTQLE 833
++ YY N F +++I+TQLE
Sbjct: 2603 AELYYANGCDFNHTIEILTQLE 2668
Score = 25.8 bits (50), Expect(5) = 2e-36
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3 / +2
Query: 1266 SLRHALLEQQDRLAQEKARENIYQQR 1343
S++ Q + + EKARE IY+QR
Sbjct: 4379 SMKGQTYNTQMKASHEKAREAIYRQR 4456
Score = 77.1 bits (162), Expect(3) = 6e-19
Identities = 40/90 (44%), Positives = 52/90 (57%)
Frame = -3 / -1
Query: 427 LKSGVISSGSCCCQYRCASSSGLLGTDSGWSALISFEDSETGILVVSDLFEASLTHLRHE 248
LKSG++SSGSC Q CASSS L D + I F ++ L+ S+ S L HE
Sbjct: 2208 LKSGIMSSGSCLRQNWCASSSELFDFDDSDLSRIVFPEALRSALLTSETALLSKDGLIHE 2029
Query: 247 GTNSTALGFNEVVLFIKLIFLSSMDILLMS 158
GTNS ALGFN V LF + +S ++ L+S
Sbjct: 2028 GTNSAALGFNAVTLFGNIDLVSPLETTLLS 1939
Score = 43.2 bits (88), Expect(3) = 6e-19
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 1607 DAEEARLCLRVLKAVLQEILLDGGGQP 1527
+ E+ RLCLRV++A LQ+ LLDG GQP
Sbjct: 4883 NTEQTRLCLRVVEAFLQKKLLDGDGQP 4803
Score = 24.4 bits (47), Expect(3) = 6e-19
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3 / -3
Query: 1480 PVDRAIFLLLLSSLFRTCIASLA*RPQRSI 1391
PV A+ L + SS IAS RP RSI
Sbjct: 4738 PVALAVLLRVPSSTLSIWIASFTWRPCRSI 4649
Score = 42.8 bits (87), Expect = 0.008
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3 / -3
Query: 1606 TRKRPGCACVY*RPCSRRYCSMAAVNLA 1523
TR +PGCACV RP SRR CS A +LA
Sbjct: 4882 TRSKPGCACV*WRPSSRRNCSTAMGSLA 4799
>LOC_Os03g36050:12003.t03080:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
Length = 5046
Score = 32.7 bits (65), Expect = 8.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3 / +1
Query: 535 LDVWFGENNEAPKPSFIDKPVSERLSGPGVSSWPR 431
LD W + P ID V G GV+SWPR
Sbjct: 61 LDTWTWPREDVPGLGLIDGGVDLS*GGEGVTSWPR 165
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 791,592,119
Number of extensions: 13686729
Number of successful extensions: 62680
Number of sequences better than 10.0: 42
Length of query: 632
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 581
Effective length of database: 52,743,708
Effective search space: 30644094348
Effective search space used: 30644094348
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)