ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63d13 |
|---|---|
| Clone Library Name | barley_pub |
>Q86UW6:N4BP2_HUMAN NEDD4-binding protein 2 - Homo sapiens (Human)| Length = 1770 Score = 43.5 bits (101), Expect = 0.003 Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Frame = +3 Query: 1290 QQDRLAQEKARENIYQQRIQMPELQGLIQEQNPAIDLCGLHASEAMHVLNNELNNRRKIA 1469 QQ L ++K +E + I++ E +DL GLH EA+ L L + + Sbjct: 1657 QQGTLHEQKMKEANHLAAIEIFEKVNASLLPQNVLDLHGLHVDEALEHLMRVLEKKTEEF 1716 Query: 1470 RSTGRRLQAIIISNPRTP-----ARLTAAIEQYLLEHGLQYTQAQPGLFRVLLQ 1616 + G + +I+ AR+ A+ +YL+ H ++++ +PG +V+L+ Sbjct: 1717 KQNGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKVMLK 1770
>Q9VM75:HEAT1_DROME Uncharacterized protein CG10805 - Drosophila melanogaster (Fruit fly)| Length = 2096 Score = 38.5 bits (88), Expect = 0.099 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -2 Query: 1670 FSFHLIMSTNT*AVPATSLQQDAEEARLCLRVLKAVLQEILLDGGGQPRRGTWVR 1506 F L+ +T A+ +T Q +E RLCLR+L+ + ++ + QP R W R Sbjct: 759 FLLTLVKNTKWTALASTPWNQMTDELRLCLRLLEIICAQVFSEKADQPERQEWTR 813
>P52890:ATF1_SCHPO Transcription factor atf1 - Schizosaccharomyces pombe (Fission| yeast) Length = 566 Score = 35.4 bits (80), Expect = 0.84 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 11/161 (6%) Frame = +3 Query: 327 ISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGA 506 IS++ ++ + + + QQ PD I P F T + ++TG +MN Sbjct: 295 ISSENDQAASTTANNLLKQTQQQTFPDSIRPSF-------TQNTNPQAVTG-TMNPQASR 346 Query: 507 SLFSPNQ-TSRMQHHASPFVRD--------TLSTRGKFEFPGQEQQQATIMSP--TASTM 653 + P Q + P V +L+ R +F GQ + + P T+++ Sbjct: 347 TQQQPMYFMGSQQFNGMPSVYGDTVNPADPSLTLRQTTDFSGQNAENGSTNLPQKTSNSD 406 Query: 654 SPTAAPWVKTVRNGGQYGTNRRDASHYNGDSSIGSPLQSDA 776 PTA + NG Y T++ +S+ N SS S + A Sbjct: 407 MPTANSMPVKLENGTDYSTSQEPSSNANNQSSPTSSINGKA 447
>P97881:MUC13_RAT Mucin-13 precursor - Rattus norvegicus (Rat)| Length = 547 Score = 33.5 bits (75), Expect = 3.2 Identities = 37/154 (24%), Positives = 52/154 (33%), Gaps = 1/154 (0%) Frame = +3 Query: 210 TTSLNPNAVEF-VPSCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 386 TT+ P + P + +S S + T P S S++ Q S S P A Sbjct: 13 TTATQPTSTSTQTPGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTAT-- 70 Query: 387 WQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQHHASPFVR 566 Q TP G + PG S T + S +P T ++P Sbjct: 71 -QPTXTSTQTP-----GTTQLPGTTSTPTT--TATQPTSTSFQTPGTTQLPSSTSTPTTT 122 Query: 567 DTLSTRGKFEFPGQEQQQATIMSPTASTMSPTAA 668 T T + PG Q SPT + PT + Sbjct: 123 ATQPTSTASQTPGTTQPPGGASSPTTTVTQPTGS 156
>Q13761:RUNX3_HUMAN Runt-related transcription factor 3 - Homo sapiens (Human)| Length = 415 Score = 33.1 bits (74), Expect = 4.2 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 20/196 (10%) Frame = +3 Query: 246 PSCLRCVSDASNRSDTTKIPVSESSKEISADQPE----SVPSNPDEEAHRYWQQQL--PD 407 PS +S S+ S + P+ +S+ P S P+ P R+ ++ P Sbjct: 213 PSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPG 272 Query: 408 DITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFSP-------NQTSRMQHHASPFVR 566 ++ F SLS+ G+ F + P NQ+ Q + SP+ Sbjct: 273 AMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL 332 Query: 567 DTLSTRGKFEFP-------GQEQQQATIMSPTASTMSPTAAPWVKTVRNGGQYGTNRRDA 725 ++ G ++F G ++ +++ S+ + AA + GGQ D Sbjct: 333 YYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADG 392 Query: 726 SHYNGDSSIGSPLQSD 773 SH N +++ +P + D Sbjct: 393 SHSNSPTALSTPGRMD 408
>P08921:CD2_RAT T-cell surface antigen CD2 precursor - Rattus norvegicus (Rat)| Length = 344 Score = 33.1 bits (74), Expect = 4.2 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Frame = +2 Query: 1481 PPAPGHHNI*PTY-PCEVDRRHRAVSPGARP-----SVHAGTAGPLPRPAAVK*QGPPRC 1642 PP PGHH P + P R+R P RP VH PLPRP Q P C Sbjct: 277 PPPPGHHLQTPGHRPLPPSHRNREHQPKKRPPPSGTQVHQQKGPPLPRPRV---QPKPPC 333
>Q9W705:NCOA2_XENLA Nuclear receptor coactivator 2 - Xenopus laevis (African clawed frog)| Length = 1516 Score = 32.7 bits (73), Expect = 5.4 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 11/124 (8%) Frame = +3 Query: 300 IPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTG 479 IP S +S I + P P+ + +P P F P P S SL+ Sbjct: 1296 IPASINSPRIPQGSTQQFPFPPN------YGTGIPSP--PPFTSPFSPVPPSPGSQSLSH 1347 Query: 480 LSM--------NDGFGASL---FSPNQTSRMQHHASPFVRDTLSTRGKFEFPGQEQQQAT 626 S+ N G S+ + P +MQH+A F +S + F G Q+ Sbjct: 1348 SSLHGSQMNLANQGIMGSMGGQYGPVMNPQMQHNAFQFANSGMSQQSDPGFTGATTPQSP 1407 Query: 627 IMSP 638 IMSP Sbjct: 1408 IMSP 1411
>P58462:FOXP1_MOUSE Forkhead box protein P1 - Mus musculus (Mouse)| Length = 705 Score = 32.7 bits (73), Expect = 5.4 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 14/186 (7%) Frame = +3 Query: 1101 SRGSHLLAGPYNGNHDMISNNTLQNIAGVQTGPTWLDTDATANMFLEKDEVHDFASLRHA 1280 S GS + G GNH ++ L++ P +D A +++ + R Sbjct: 11 SNGSAIQNGSSGGNH-LLECGALRDTRSNGEAPA-VDLGAADLAHVQQQQQQALQVARQL 68 Query: 1281 LLEQQDRLAQEKARENIYQQRIQMPELQGLIQEQNPAIDLCGLHASEAMHVLNNELNNRR 1460 LL+QQ + Q++ ++ QQ+ Q + Q Q+Q + GL + + N+ Sbjct: 69 LLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVSGLKSPK-----RNDKQPAL 123 Query: 1461 KIARS---------TGRRLQAIIISNPRTPARLTAAIEQ---YLLEHGLQ--YTQAQPGL 1598 ++ S T +++Q I+ +P +L ++Q +L+ LQ Y + Q L Sbjct: 124 QVPVSVAMMTPQVITPQQMQQILQQQVLSPQQLQVLLQQQQALMLQQQLQEFYKKQQEQL 183 Query: 1599 FRVLLQ 1616 LLQ Sbjct: 184 QLQLLQ 189
>Q8MJS1:I12R2_PIG Interleukin-12 receptor beta-2 chain precursor - Sus scrofa (Pig)| Length = 861 Score = 32.3 bits (72), Expect = 7.1 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 2/129 (1%) Frame = +3 Query: 252 CLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNV 431 C R + D +N + K P+ E K++S D+ + P+E + LP +TP F Sbjct: 662 CSREIPDPANSTWAKKYPIVEEKKQLSLDRLLADWPTPEEPEPLVINEVLP-QVTPVFRR 720 Query: 432 LGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQHHASPFV--RDTLSTRGKFEFPG 605 PG + + G+S SP + P V L +R PG Sbjct: 721 PHHPNWPGKGQRLQGRHASEEDTGSSASSPPPPRALTAETGPAVDLYKVLGSRRPDSKPG 780 Query: 606 QEQQQATIM 632 T++ Sbjct: 781 NPVSHLTVL 789
>Q498D1:FOXP1_RAT Forkhead box protein P1 - Rattus norvegicus (Rat)| Length = 711 Score = 32.0 bits (71), Expect = 9.3 Identities = 25/98 (25%), Positives = 44/98 (44%) Frame = +3 Query: 1089 SLGSSRGSHLLAGPYNGNHDMISNNTLQNIAGVQTGPTWLDTDATANMFLEKDEVHDFAS 1268 S S GS + G GNH ++ TL++ P +D A +++ + Sbjct: 7 SEAKSNGSTIQNGSSGGNH-LLECGTLRDTRSNGEAPA-VDLGAADLAHVQQQQQQALQV 64 Query: 1269 LRHALLEQQDRLAQEKARENIYQQRIQMPELQGLIQEQ 1382 R LL+QQ + Q++ ++ QQ+ Q + Q Q+Q Sbjct: 65 ARQLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 102
>Q7TN98:CPEB4_MOUSE Cytoplasmic polyadenylation element-binding protein 4 - Mus musculus| (Mouse) Length = 729 Score = 32.0 bits (71), Expect = 9.3 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +3 Query: 1152 ISNNTLQNIAGVQTGPTWL-DTDATANMFLEKDEVHDFASLRHALLEQQDRLAQEKAREN 1328 I+NNT N G G WL AT N+ +DE+ + EQQD L +++ + Sbjct: 45 INNNTAAN--GSSAGSAWLFPAPATHNI---QDEILGSEKAKSQQQEQQDPLEKQQLSPS 99 Query: 1329 IYQQRIQMPELQGLIQEQNP 1388 Q+ +PE + E+NP Sbjct: 100 PGQEAGILPETEKAKAEENP 119 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 332,345,967 Number of extensions: 7505138 Number of successful extensions: 21410 Number of sequences better than 10.0: 11 Number of HSP's gapped: 21358 Number of HSP's successfully gapped: 11 Length of query: 632 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 513 Effective length of database: 68,045,334 Effective search space: 34907256342 Effective search space used: 34907256342 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
