ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63c11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073472:Os04g0605900 | 403 | e-112 | 2 | AK102873:Os08g0234000 | 395 | e-110 | 3 | AK061680:Os08g0234000 | 210 | 1e-54 | 4 | AK101416:Os08g0542100 | 188 | 6e-48 | 5 | AK058490:Os08g0542100 | 188 | 6e-48 | 6 | D29720:Os04g0605900 | 68 | 9e-12 | 7 | Os02g0530800:Os02g0530800 | 31 | 1.5 | 8 | Os08g0542300:Os08g0542300 | 30 | 3.4 | 9 | AB117994:Os09g0326900 | 29 | 4.5 | 10 | AK098857:Os09g0326900 | 29 | 4.5 | 11 | AK067685:Os09g0326900 | 29 | 4.5 | 12 | AK058307:Os09g0326900 | 29 | 4.5 |
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>AK073472:Os04g0605900 | Length = 244 Score = 403 bits (1035), Expect = e-112 Identities = 201/244 (82%), Positives = 215/244 (88%) Frame = +3 Query: 66 MSSEAAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQ 245 M+SEAAKVVVPESVL KRKREE+W S E+RK+IF+RAKQYAEEY+AQ Sbjct: 1 MASEAAKVVVPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQ 60 Query: 246 DKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLK 425 +KELVQLKREARMKGGFYVSPE KLLFVVRIRGINAMHPKT+KILQLLRLRQIFNGVFLK Sbjct: 61 EKELVQLKREARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLK 120 Query: 426 VNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNI 605 VNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKH+I Sbjct: 121 VNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHDI 180 Query: 606 ICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQLV 785 ICIED+VHEI+TVGPHFKEANNFLWPF RNHYVEGGDAGNRE+YIN+L+ Sbjct: 181 ICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELI 240 Query: 786 RRMN 797 RRMN Sbjct: 241 RRMN 244
>AK102873:Os08g0234000 | Length = 245 Score = 395 bits (1015), Expect = e-110 Identities = 199/245 (81%), Positives = 212/245 (86%), Gaps = 1/245 (0%) Frame = +3 Query: 66 MSSEAAKV-VVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDA 242 M++E AK VVPESVL KRKREE W + E+RK+IFARAKQYA+EYDA Sbjct: 1 MAAEVAKAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDA 60 Query: 243 QDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFL 422 Q+KELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKT+KILQLLRLRQIFNGVFL Sbjct: 61 QEKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFL 120 Query: 423 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHN 602 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPL NNKVIEEGLGKH+ Sbjct: 121 KVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGLGKHD 180 Query: 603 IICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQL 782 IICIED+VHEI+TVGPHFKEANNFLWPF RNHYVEGGDAGNREDYIN+L Sbjct: 181 IICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINEL 240 Query: 783 VRRMN 797 +RRMN Sbjct: 241 IRRMN 245
>AK061680:Os08g0234000 | Length = 117 Score = 210 bits (535), Expect = 1e-54 Identities = 99/117 (84%), Positives = 104/117 (88%) Frame = +3 Query: 447 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIEDVV 626 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPL NNKVIEEGLGKH+IICIED+V Sbjct: 1 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGLGKHDIICIEDLV 60 Query: 627 HEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQLVRRMN 797 HEI+TVGPHFKEANNFLWPF RNHYVEGGDAGNREDYIN+L+RRMN Sbjct: 61 HEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINELIRRMN 117
>AK101416:Os08g0542100 | Length = 248 Score = 188 bits (477), Expect = 6e-48 Identities = 96/239 (40%), Positives = 147/239 (61%), Gaps = 4/239 (1%) Frame = +3 Query: 93 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 272 V E+VL KRK E W ++ K R + + E+ ++ + V++K Sbjct: 13 VRETVLKKRKVNEDWAVKNRERKAAKRQRRRDDGKGAIKRPEDFVREFRNKELDFVRMKT 72 Query: 273 EARMKGGFYVSP----EAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 440 +++ + P +KL+F +RI G +HP ++IL+ LRL Q+ GVFLK AT Sbjct: 73 RLKVRK---LPPAETLNSKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTGVFLKATDAT 129 Query: 441 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIED 620 + L VEP++ YG+PNLK+V++LIYK+G G L+K+ PLT+N +IE+ LG++ IIC+ED Sbjct: 130 MKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKALGEYGIICLED 189 Query: 621 VVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQLVRRMN 797 +VHEI +VGPHF+EA+NFL PF + + +GGD+GNRED IN+L+ ++N Sbjct: 190 LVHEIASVGPHFREASNFLMPFKLKCPERRLQMKKKPFKDGGDSGNREDKINELIEKLN 248
>AK058490:Os08g0542100 | Length = 248 Score = 188 bits (477), Expect = 6e-48 Identities = 96/239 (40%), Positives = 147/239 (61%), Gaps = 4/239 (1%) Frame = +3 Query: 93 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 272 V E+VL KRK E W ++ K R + + E+ ++ + V++K Sbjct: 13 VRETVLKKRKVNEDWAVKNRERKAAKRQRRRDDGKGAIKRPEDFVREFRNKELDFVRMKT 72 Query: 273 EARMKGGFYVSP----EAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKAT 440 +++ + P +KL+F +RI G +HP ++IL+ LRL Q+ GVFLK AT Sbjct: 73 RLKVRK---LPPAETLNSKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTGVFLKATDAT 129 Query: 441 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGLGKHNIICIED 620 + L VEP++ YG+PNLK+V++LIYK+G G L+K+ PLT+N +IE+ LG++ IIC+ED Sbjct: 130 MKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKALGEYGIICLED 189 Query: 621 VVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQLVRRMN 797 +VHEI +VGPHF+EA+NFL PF + + +GGD+GNRED IN+L+ ++N Sbjct: 190 LVHEIASVGPHFREASNFLMPFKLKCPERRLQMKKKPFKDGGDSGNREDKINELIEKLN 248
>D29720:Os04g0605900 | Length = 45 Score = 68.2 bits (165), Expect = 9e-12 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = +3 Query: 663 ANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNREDYINQLVRRMN 797 ANNFLWPF RNHYVEGGDAGNRE+YIN+L+RRMN Sbjct: 1 ANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 45
>Os02g0530800:Os02g0530800 | Length = 2710 Score = 30.8 bits (68), Expect = 1.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 383 LEDLLGLWVHGIDTSDSDNKQQLSLRTDI 297 +E+L+ LW G+DT DS K LR + Sbjct: 402 IEELIELWEDGVDTYDSSTKTNFKLRAQL 430
>Os08g0542300:Os08g0542300 | Length = 68 Score = 29.6 bits (65), Expect = 3.4 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +3 Query: 741 GGDAGNREDYINQLVRRMN 797 GGD G+RED IN+L+ ++N Sbjct: 50 GGDLGDREDKINELIDKLN 68
>AB117994:Os09g0326900 | Length = 388 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 186 ENRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAK 317 +++K + K+ +E +A D+E+ +LK+EA+ KG S +K Sbjct: 93 KDKKAMRRAEKERLKEGEAADEEMKKLKKEAKKKGASKESTSSK 136
>AK098857:Os09g0326900 | Length = 450 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 186 ENRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAK 317 +++K + K+ +E +A D+E+ +LK+EA+ KG S +K Sbjct: 155 KDKKAMRRAEKERLKEGEAADEEMKKLKKEAKKKGASKESTSSK 198
>AK067685:Os09g0326900 | Length = 450 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 186 ENRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAK 317 +++K + K+ +E +A D+E+ +LK+EA+ KG S +K Sbjct: 155 KDKKAMRRAEKERLKEGEAADEEMKKLKKEAKKKGASKESTSSK 198
>AK058307:Os09g0326900 | Length = 389 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 186 ENRKVIFARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAK 317 +++K + K+ +E +A D+E+ +LK+EA+ KG S +K Sbjct: 94 KDKKAMRRAEKERLKEGEAADEEMKKLKKEAKKKGASKESTSSK 137 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,019,323 Number of extensions: 530298 Number of successful extensions: 1320 Number of sequences better than 10.0: 12 Number of HSP's gapped: 1320 Number of HSP's successfully gapped: 12 Length of query: 331 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 230 Effective length of database: 11,355,714 Effective search space: 2611814220 Effective search space used: 2611814220 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
