>LOC_Os04g51630:12004.t04640:unspliced-genomic 60S ribosomal protein L7-2, putative, expressed|
Length = 2992
Score = 140 bits (300), Expect(6) = e-107
Identities = 54/73 (73%), Positives = 61/73 (83%)
Frame = +3 / +1
Query: 582 EGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNR 761
+GLGKH+IICIED+VHEI+TVGPHFKEANNFLWPF RNHYVEGGDAGNR
Sbjct: 1924 QGLGKHDIICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNR 2103
Query: 762 EDYINQLVRRMN* 800
E+YIN+L+RRMN*
Sbjct: 2104 ENYINELIRRMN* 2142
Score = 87.2 bits (184), Expect(6) = e-107
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3 / +2
Query: 63 EMSSEAAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDA 242
+M+SEAAKVVVPESVL KRKREE+W S E+RK+IF+RAKQYAEEY+A
Sbjct: 200 QMASEAAKVVVPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEA 379
Query: 243 QDKEL 257
Q + L
Sbjct: 380 QVRSL 394
Score = 85.8 bits (181), Expect(6) = e-107
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +3 / +3
Query: 468 YVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 584
++ + YPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE
Sbjct: 1734 FLCFRYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 1850
Score = 78.0 bits (164), Expect(6) = e-107
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 237 DAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRG 344
D Q+KELVQLKREARMKGGFYVSPE KLLFVVRIRG
Sbjct: 970 DEQEKELVQLKREARMKGGFYVSPEEKLLFVVRIRG 1077
Score = 68.9 bits (144), Expect(6) = e-107
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 375 ILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 482
I + + + QIFNGVFLKVNKATINMLRRVEPYVAYG
Sbjct: 1294 IEEKMLILQIFNGVFLKVNKATINMLRRVEPYVAYG 1401
Score = 38.2 bits (77), Expect(6) = e-107
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 344 YQCHAPKDQEDPPAFAFE 397
YQCHAP+DQED A AFE
Sbjct: 1175 YQCHAPEDQEDFAALAFE 1228
Score = 126 bits (270), Expect(6) = 8e-84
Identities = 58/72 (80%), Positives = 59/72 (81%)
Frame = -1 / -3
Query: 799 *FILLTSWLM*SSRLPASPPST*WFLFFLRPPSGALSLNGHRKLLASLK*GPTVKISWTT 620
*FILL S LM* SRLPASPPST*WFLFF PPSGA SLNG RKLLASLK GPTV IS T
Sbjct: 2141 *FILLMSSLM*FSRLPASPPST*WFLFFFSPPSGAFSLNGQRKLLASLKCGPTVMIS*TR 1962
Query: 619 SSMQMMLCFPRP 584
SSMQMM C P+P
Sbjct: 1961 SSMQMMSCLPKP 1926
Score = 79.4 bits (167), Expect(6) = 8e-84
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -1 / -2
Query: 211 RAKMTLRFSVDFFFSSTALVFFSAAQSSSRFLLRSTDSGTTTFAASDDI 65
R KM+LR S+DFFFS+TA +AA +SSRFLLRSTDSGTTT AASD I
Sbjct: 348 REKMSLRLSMDFFFSATAFSLLAAAHTSSRFLLRSTDSGTTTLAASDAI 202
Score = 65.7 bits (137), Expect(6) = 8e-84
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1 / -3
Query: 484 YPYATYGSTLRSMLMVALLTLRNTPLNIC 398
YPYATYGSTLRSMLMVALLT +NTPL IC
Sbjct: 1403 YPYATYGSTLRSMLMVALLTFKNTPLKIC 1317
Score = 56.1 bits (116), Expect(6) = 8e-84
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / -1
Query: 336 FGQQTAT*PQD*HRTHPSSGPHA*AEPTPCPVH 238
+G QTAT PQ *HR HPSS PHA* P P P H
Sbjct: 1069 YGPQTATFPQG*HRNHPSSEPHA*VAPAPSPAH 971
Score = 49.2 bits (101), Expect(6) = 8e-84
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 584 LLDDLVVGQRNPLLVELSITSLVDQLPHTLQVRVP 480
LLDD VV +R+ LLVELSI LVDQ TLQ+ VP
Sbjct: 1850 LLDDFVVCKRDSLLVELSIAPLVDQFTDTLQIWVP 1746
Score = 43.2 bits (88), Expect(6) = 8e-84
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 400 CLKRKSWRIFLVFGCMALI 344
CLKRKS +IFLVFGCMALI
Sbjct: 1231 CLKRKSCKIFLVFGCMALI 1175
Score = 96.8 bits (205), Expect(6) = 1e-55
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = +2 / +3
Query: 602 HHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAAGRPQEEEEPLRRGW*RRQP*GLHQPA 781
HHLH* C D D WP+ QGGQQLP+AIQA+G G +EEEEPLR GW* P* LHQ
Sbjct: 1944 HHLH*GSCS*DHDCWPTFQGGQQLPLAIQAEGTTGWAEEEEEPLR*GW*CW*P*ELHQRT 2123
Query: 782 RQEDEL 799
Q+DEL
Sbjct: 2124 HQKDEL 2141
Score = 50.6 bits (104), Expect(6) = 1e-55
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 245 GQGVGSA*A*GPDEGWVLCQS*G*VAVCCP 334
G+G G+ *A*G DEGW LCQ *G VAVC P
Sbjct: 978 GEGAGAT*A*GSDEGWFLCQP*GKVAVCGP 1067
Score = 50.1 bits (103), Expect(6) = 1e-55
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 400 RYSMECSSRLTRPPSTCSAGSSHMLHMG 483
R MECS R T+PP TC AG SHMLHMG
Sbjct: 1319 RSLMECS*RSTKPPLTCCAGLSHMLHMG 1402
Score = 46.0 bits (94), Expect(6) = 1e-55
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3 / +3
Query: 345 INAMHPKTKKILQLLRLRQI 404
INAMHPKT+KILQLLRLRQ+
Sbjct: 1176 INAMHPKTRKILQLLRLRQV 1235
Score = 42.8 bits (87), Expect(6) = 1e-55
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1 / +1
Query: 478 MGTRT*RV*GS*STREVMESSTSKGFL*PTTRSSRR 585
+GT+ *RV +*STR MESSTSK L TT+SSRR
Sbjct: 1744 LGTQI*RVSVN*STRGAMESSTSKESLLQTTKSSRR 1851
Score = 37.7 bits (76), Expect(6) = 1e-55
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 191 PQGHLRPRQAVRRGVRCTGQGVG 259
PQ HL PRQAVRRGVR G VG
Sbjct: 328 PQAHLLPRQAVRRGVRGPG*IVG 396
Score = 88.6 bits (187), Expect(5) = 3e-48
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = -3 / -2
Query: 806 INLVHPPDELVDVVLTVAGXXXXXXXXXXXLEASQRRLELEWPQEVVGLLEVRANRQDLV 627
+ LVHP DE VDVVLTV L+ +Q L+LEWP+EVVGLLE+ AN DL+
Sbjct: 2148 MELVHPSDEFVDVVLTVTSITTLNVVVPLLLQPTQWCLQLEWPEEVVGLLEMWANSHDLM 1969
Query: 626 DNVFNADDVVLSKTLL 579
+ + NADDV+L++TL+
Sbjct: 1968 NKILNADDVMLTQTLI 1921
Score = 57.4 bits (119), Expect(5) = 3e-48
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = -3 / -2
Query: 485 VPICNIWLDPAEHVDGGLVNLEEHSIEYL 399
+PICNIWL+PA+HV+GG V+L+EHSI+ L
Sbjct: 1404 LPICNIWLNPAQHVNGGFVDLQEHSIKDL 1318
Score = 54.7 bits (113), Expect(5) = 3e-48
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 343 PLIRTTNSNLASGLT*NPPFIRASRLS*TN 254
P IRTTNSN +SGLT* PPFIRASRLS T+
Sbjct: 1076 PRIRTTNSNFSSGLT*KPPFIRASRLSCTS 987
Score = 41.4 bits (84), Expect(5) = 3e-48
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 585 PPR*PCCWSEESFAC*AFHNLSCR 514
PPR* CC E FAC*AFH+ SCR
Sbjct: 1851 PPR*LCCL*EGFFAC*AFHSPSCR 1780
Score = 37.7 bits (76), Expect(5) = 3e-48
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 396 SNAKAGGSSWSLGAWH*Y 343
SNA+A SSWS GAWH*Y
Sbjct: 1227 SNARAAKSSWSSGAWH*Y 1174
Score = 57.4 bits (119), Expect(4) = 4e-19
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -2 / -1
Query: 705 PAAP*A*MATGSCWPP*SEGQPSRSRGQRLQCR*CCAFQDP 583
P P A*MA GSCWPP*+ GQ S S Q QCR*C A+ +P
Sbjct: 2047 PVVPSA*MARGSCWPP*NVGQQS*SHEQDPQCR*CHAYPNP 1925
Score = 43.2 bits (88), Expect(4) = 4e-19
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3 / -2
Query: 341 SDSDNKQQLSLRTDIEPTLHPGLT 270
+D+D+KQQL LR DIE TLHP LT
Sbjct: 1074 TDTDHKQQLFLRADIETTLHPSLT 1003
Score = 35.0 bits (70), Expect(4) = 4e-19
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 404 YLSQTQKLEDLLGLWVHGIDTS 339
+L QTQ+L++L GL VHGIDT+
Sbjct: 1235 HLPQTQELQNLPGLRVHGIDTT 1170
Score = 24.9 bits (48), Expect(4) = 4e-19
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 477 MQHMARPCGA 448
MQHMA+PC A
Sbjct: 1396 MQHMAQPCAA 1367
Score = 35.0 bits (70), Expect(4) = 1e-06
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2 / +2
Query: 482 VPEPEECEGVDLQERLWXXXXXXXXXXXXXGHRGG 586
VP+ EEC +DLQE LW HRGG
Sbjct: 1748 VPKFEECP*IDLQEGLWKAQQAKNPSYKQQSHRGG 1852
Score = 29.0 bits (57), Expect(4) = 1e-06
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 238 MHRTRSWFSLSVRPG*RV 291
M R RSW +LSVR G*RV
Sbjct: 971 MSRRRSWCNLSVRLG*RV 1024
Score = 28.6 bits (56), Expect(4) = 1e-06
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +1
Query: 352 PCTQRPRRSSSFCV*DRY 405
PCT+RP R S CV* R+
Sbjct: 1183 PCTRRPGRFCSSCV*GRW 1236
Score = 23.5 bits (45), Expect(4) = 1e-06
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +3
Query: 464 AICCIWV 484
AICCIWV
Sbjct: 1383 AICCIWV 1403
>LOC_Os08g13690:12008.t01245:unspliced-genomic 60S ribosomal protein L7-1, putative, expressed|
Length = 2613
Score = 141 bits (303), Expect(6) = e-104
Identities = 55/72 (76%), Positives = 60/72 (83%)
Frame = +3 / +3
Query: 585 GLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRE 764
GLGKH+IICIED+VHEI+TVGPHFKEANNFLWPF RNHYVEGGDAGNRE
Sbjct: 1941 GLGKHDIICIEDLVHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRE 2120
Query: 765 DYINQLVRRMN* 800
DYIN+L+RRMN*
Sbjct: 2121 DYINELIRRMN* 2156
Score = 80.8 bits (170), Expect(6) = e-104
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +3 / +3
Query: 483 YPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 584
YPNLKSVRELIYKRGYGKLNKQRIPL NNKVIEE
Sbjct: 1746 YPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEE 1847
Score = 78.0 bits (164), Expect(6) = e-104
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 243 QDKELVQLKREARMKGGFYVSPEAKLLFVVRIRG 344
Q+KELVQLKREARMKGGFYVSPEAKLLFVVRIRG
Sbjct: 843 QEKELVQLKREARMKGGFYVSPEAKLLFVVRIRG 944
Score = 71.6 bits (150), Expect(6) = e-104
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3 / +3
Query: 399 QIFNGVFLKVNKATINMLRRVEPYVAYGY 485
QIFNGVFLKVNKATINMLRRVEPYVAYGY
Sbjct: 1164 QIFNGVFLKVNKATINMLRRVEPYVAYGY 1250
Score = 70.7 bits (148), Expect(6) = e-104
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +3 / +2
Query: 78 AAKVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQ 245
A VVPESVL KRKREE W + E+RK+IFARAKQYA+EYDAQ
Sbjct: 167 AKAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQ 334
Score = 46.0 bits (94), Expect(6) = e-104
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3 / +1
Query: 345 INAMHPKTKKILQLLRLRQI 404
INAMHPKT+KILQLLRLRQ+
Sbjct: 1021 INAMHPKTRKILQLLRLRQV 1080
Score = 140 bits (301), Expect(6) = 5e-83
Identities = 61/75 (81%), Positives = 64/75 (85%)
Frame = -1 / -3
Query: 808 QST*FILLTSWLM*SSRLPASPPST*WFLFFLRPPSGALSLNGHRKLLASLK*GPTVKIS 629
+ *FIL S LM*SSRLPASPPST*WFLFFLRPPSGA +L GHRKLLASLK GPTV IS
Sbjct: 2164 RKA*FILRMSSLM*SSRLPASPPST*WFLFFLRPPSGAFNLKGHRKLLASLKCGPTVMIS 1985
Query: 628 WTTSSMQMMLCFPRP 584
WT SSMQMM CFP+P
Sbjct: 1984 WTRSSMQMMSCFPKP 1940
Score = 66.1 bits (138), Expect(6) = 5e-83
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -1 / -3
Query: 484 YPYATYGSTLRSMLMVALLTLRNTPLNIC 398
YPYATYGSTLRSMLMVALLTLR TPL IC
Sbjct: 1249 YPYATYGSTLRSMLMVALLTLRKTPLKIC 1163
Score = 59.7 bits (124), Expect(6) = 5e-83
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -1 / -1
Query: 211 RAKMTLRFSVDFFFSSTALVFFSAAQSSSRFLLRSTDSGTTTFAAS 74
RAKM+LR S FFFS++A F SAA SSRF STDSGTT A+
Sbjct: 300 RAKMSLRLSTAFFFSASAFSFLSAAHCSSRFRFFSTDSGTTAAFAT 163
Score = 58.3 bits (121), Expect(6) = 5e-83
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -3 / -2
Query: 584 LLDDLVVGQRNPLLVELSITSLVDQLPHTLQVRVP 480
LL+D VV +RNPLLVELS+T LVDQ P TLQV VP
Sbjct: 1847 LLNDFVVLKRNPLLVELSVTPLVDQFPDTLQVWVP 1743
Score = 54.7 bits (113), Expect(6) = 5e-83
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = -1 / -3
Query: 343 PLIRTTNSNLASGLT*NPPFIRASRLS*TN 254
P +RTTN +LASGLT*NPPFIRASRLS T+
Sbjct: 943 PRMRTTNRSLASGLT*NPPFIRASRLSCTS 854
Score = 36.8 bits (74), Expect(6) = 5e-83
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1 / -2
Query: 400 CLKRKSWRIFLVFGCMALI 344
CL R+S +IFLV GCMALI
Sbjct: 1076 CLNRRSCKIFLVLGCMALI 1020
Score = 113 bits (241), Expect(6) = 2e-56
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = +2 / +2
Query: 584 GSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAAGRPQEEEEPLRRGW*RRQP* 763
G +A HHLH* CPRD D +LQGGQQLPVA+Q +G PQEEEEPL RGW* RQP*
Sbjct: 1940 GLGEA*HHLH*GSCPRDHDCRSTLQGGQQLPVALQVEGTTRWPQEEEEPLCRGW*CRQP* 2119
Query: 764 GLHQPARQEDELG 802
GLHQ A EDELG
Sbjct: 2120 GLHQRAHPEDELG 2158
Score = 50.6 bits (104), Expect(6) = 2e-56
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1 / +1
Query: 481 GTRT*RV*GS*STREVMESSTSKGFL*PTTRSSRR 585
GT+T*RV G+*STR V ESSTS+GFL TT+S RR
Sbjct: 1744 GTQT*RVSGN*STRGVTESSTSRGFLFRTTKSLRR 1848
Score = 49.2 bits (101), Expect(6) = 2e-56
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 400 RYSMECSSRLTRPPSTCSAGSSHMLHMG 483
R SM SSRLTR P TC AG SHMLHMG
Sbjct: 1165 RSSMVSSSRLTRQPLTCCAGLSHMLHMG 1248
Score = 40.0 bits (81), Expect(6) = 2e-56
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 245 GQGVGSA*A*GPDEGWVLCQS*G*VAVCCPN 337
G+G +A A*G DEGWVL Q *G +VC P+
Sbjct: 845 GEGACAAQA*GSDEGWVLRQP*GQTSVCGPH 937
Score = 38.2 bits (77), Expect(6) = 2e-56
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 191 PQGHLRPRQAVRRGVRCTGQ 250
PQ HLRPRQAVR GVR G+
Sbjct: 280 PQAHLRPRQAVRPGVRRAGE 339
Score = 34.5 bits (69), Expect(6) = 2e-56
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 344 YQCHAPKDQEDPPAFAFE 397
YQCHAP+DQED A A E
Sbjct: 1020 YQCHAPQDQEDLAASAVE 1073
Score = 95.5 bits (202), Expect(5) = 1e-46
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = -3 / -2
Query: 803 NLVHPPDELVDVVLTVAGXXXXXXXXXXXLEASQRRLELEWPQEVVGLLEVRANRQDLVD 624
+LVHPPDELVDVVLTVAG LEA++ L+LE PQEVVGLLEV + DLVD
Sbjct: 2159 SLVHPPDELVDVVLTVAGITTLDIVVPLLLEATEWCLQLEGPQEVVGLLEVWTDSHDLVD 1980
Query: 623 NVFNADDVVLSKTLLDD 573
+ NADDV+L + L+ D
Sbjct: 1979 KILNADDVMLPQALMVD 1929
Score = 56.1 bits (116), Expect(5) = 1e-46
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = -3 / -2
Query: 485 VPICNIWLDPAEHVDGGLVNLEEHSIEYL 399
+PICNIWL+PA+HV+G LVNLEE +IE L
Sbjct: 1250 IPICNIWLNPAQHVNGCLVNLEEDTIEDL 1164
Score = 44.1 bits (90), Expect(5) = 1e-46
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 356 HGIDTSDSDNKQQLSLRTDIEPTLHPGLT 270
+ +D+D+KQ+ LR D+EPTLHP LT
Sbjct: 956 YSFSPTDADHKQKFGLRADVEPTLHPSLT 870
Score = 41.8 bits (85), Expect(5) = 1e-46
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 585 PPR*PCCWSEESFAC*AFHNLSCR 514
PP+* CC EES AC*AF N SCR
Sbjct: 1848 PPQ*LCCSEEESSAC*AFRNPSCR 1777
Score = 35.9 bits (72), Expect(5) = 1e-46
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 401 LSQTQKLEDLLGLWVHGIDTS 339
L Q QKL+DL GL VHGIDT+
Sbjct: 1077 LPQPQKLQDLPGLGVHGIDTT 1015
Score = 53.8 bits (111), Expect(4) = 1e-18
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -1
Query: 696 P*A*MATGSCWPP*SEGQPSRSRGQRLQCR*CCAFQDPPR*P 571
P * ATGSCWPP*S + S SRGQ QCR*C A P *P
Sbjct: 2052 PST*RATGSCWPP*SVDRQS*SRGQDPQCR*CHASPSPNG*P 1927
Score = 43.2 bits (88), Expect(4) = 1e-18
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = -2 / -1
Query: 333 GQQTAT*PQD*HRTHPSSGPHA*AEPTPCP 244
G QT PQ * RTHPSS PHA*A P P
Sbjct: 933 GPQTEVWPQG*RRTHPSSEPHA*AAQAPSP 844
Score = 34.5 bits (69), Expect(4) = 1e-18
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 396 SNAKAGGSSWSLGAWH*Y 343
S A+A SSWS GAWH*Y
Sbjct: 1072 STAEAARSSWSWGAWH*Y 1019
Score = 26.7 bits (52), Expect(4) = 1e-18
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 477 MQHMARPCGAXXXXXXXP*GTLH*ISVSN 391
MQHMA+PC A P*G H* SV +
Sbjct: 1242 MQHMAQPCAAC*WLPC*P*GRHH*RSVES 1156
Score = 37.3 bits (75), Expect(4) = 4e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 473 CIWVPEPEECEGVDLQERL 529
C VP+PEEC+G+DLQE L
Sbjct: 1736 CDQVPKPEECQGIDLQEGL 1792
Score = 30.4 bits (60), Expect(4) = 4e-06
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 352 PCTQRPRRSSSFCV*DRYSME 414
PCT RP RS SFC * R E
Sbjct: 1028 PCTPRPGRSCSFCG*GRLVYE 1090
Score = 23.5 bits (45), Expect(4) = 4e-06
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / +2
Query: 464 AICCIWV 484
AICCIWV
Sbjct: 1229 AICCIWV 1249
Score = 22.6 bits (43), Expect(4) = 4e-06
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1 / +1
Query: 244 RTRSWFSLSVRPG*RVG 294
R RS S SVR G*RVG
Sbjct: 844 RRRSLCSSSVRLG*RVG 894
>LOC_Os08g42920:12008.t04258:unspliced-genomic 60S ribosomal protein L7, putative, expressed|
Length = 1854
Score = 96.8 bits (205), Expect(3) = 1e-38
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3 / +1
Query: 579 EEGLGKHNIICIEDVVHEILTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGN 758
++ LG++ IIC+ED+VHEI +VGPHF+EA+NFL PF + + +GGD+GN
Sbjct: 1354 KQALGEYGIICLEDLVHEIASVGPHFREASNFLMPFKLKCPERRLQMKKKPFKDGGDSGN 1533
Query: 759 REDYINQLVRRMN* 800
RED IN+L+ ++N*
Sbjct: 1534 REDKINELIEKLN* 1575
Score = 54.7 bits (113), Expect(3) = 1e-38
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3 / +3
Query: 354 MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 482
+HP ++IL+ LRL Q+ GVFLK AT+ L VEP++ YG
Sbjct: 522 LHPHMRRILRKLRLTQVLTGVFLKATDATMKRLLVVEPFITYG 650
Score = 54.2 bits (112), Expect(3) = 1e-38
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 477 YGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEEGL 590
Y +PNLK+V++LIYK+G G L+K+ PLT+N +IE+ L
Sbjct: 758 YRFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKVL 871
Score = 62.5 bits (130), Expect(3) = 2e-20
Identities = 35/63 (55%), Positives = 36/63 (57%)
Frame = -1 / -2
Query: 775 LM*SSRLPASPPST*WFLFFLRPPSGALSLNGHRKLLASLK*GPTVKISWTTSSMQMMLC 596
L+ SSR P SPPS F F SG LSL G RK ASLK GPT IS T SS MM
Sbjct: 1550 LILSSRFPESPPSLKGFFFICNLLSGHLSLKGMRKFEASLKCGPTDAISCTRSSKHMMPY 1371
Query: 595 FPR 587
PR
Sbjct: 1370 SPR 1362
Score = 58.3 bits (121), Expect(3) = 2e-20
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = -1 / -3
Query: 502 TLFRFGYPYATYGSTLRSMLMVALLTLRNTPLNICLKRKSWRIFLVFGCMALI 344
++F F YP GST RS+ +VA + LRNTP+ C+ R +I L+ GC +++
Sbjct: 670 SMFEFSYP*VINGSTTRSLFIVASVALRNTPVRTCVSRSLRKILLMCGCKSIV 512
Score = 23.1 bits (44), Expect(3) = 2e-20
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -2 / -2
Query: 585 PPR*PCCWSEESFAC*AFHNLSCR 514
P +* CW E C H SC+
Sbjct: 866 PSQ*DHCW*EGKVPCPGTHGPSCK 795
Score = 51.0 bits (105), Expect(2) = 4e-08
Identities = 23/59 (38%), Positives = 33/59 (55%)
Frame = +2 / +3
Query: 584 GSWKAQHHLH*RRCPRDLDGWPSLQGGQQLPVAIQAQGAAGRPQEEEEPLRRGW*RRQP 760
GS + HH+ R C + WP+LQ + P A+QAQ + +EEE L+ W* R+P
Sbjct: 1359 GSGRIWHHMFGRSCA*NRISWPTLQRSFKFPHALQAQVSREEVADEEETLQGWW*LREP 1535
Score = 30.9 bits (61), Expect(2) = 4e-08
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 470 CCIWVPEPEECEGVDLQERLW 532
C I VP+ EECEG LQE W
Sbjct: 751 CVI*VPKFEECEGSYLQEGPW 813
>LOC_Os06g23320:12006.t02144:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 3451
Score = 25.4 bits (49), Expect(2) = 9.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3 / +2
Query: 383 LEDLLGLWVHGIDTSDSDNKQQLSLRTDIEPTLH 282
LED+ LW HGI D ++ +L I T++
Sbjct: 1346 LEDMRDLWEHGI*VWDEFLREYFTLHAIIFVTVN 1447
Score = 23.1 bits (44), Expect(2) = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1 / +2
Query: 433 LLTLRNTPLNICLKRK 386
LLT+ N P +C KRK
Sbjct: 1223 LLTMYNLPTWLCQKRK 1270
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 332,503,379
Number of extensions: 5248411
Number of successful extensions: 19935
Number of sequences better than 10.0: 43
Length of query: 331
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 281
Effective length of database: 52,799,986
Effective search space: 14836796066
Effective search space used: 14836796066
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)