Clone Information

BLAST Search Result

Clone Name	FLbaf60m06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q65SZ8:GLND_MANSM [Protein-PII] uridylyltransferase - Mannheimia...	60	4e-08
2	Q5FPT6:GLND_GLUOX [Protein-PII] uridylyltransferase - Gluconobac...	59	9e-08
3	Q8RQD1:GLND_AZOBR [Protein-PII] uridylyltransferase - Azospirill...	56	5e-07
4	Q2RNG2:GLND_RHORT [Protein-PII] uridylyltransferase - Rhodospiri...	55	8e-07
5	Q53245:GLND_RHITR [Protein-PII] uridylyltransferase - Rhizobium ...	54	2e-06
6	Q8EGH8:GLND_SHEON [Protein-PII] uridylyltransferase - Shewanella...	54	3e-06
7	Q9RAE4:GLND_RHILV [Protein-PII] uridylyltransferase - Rhizobium ...	52	7e-06
8	Q9AC53:GLND_CAUCR [Protein-PII] uridylyltransferase - Caulobacte...	51	2e-05
9	Q98C27:GLND_RHILO [Protein-PII] uridylyltransferase - Rhizobium ...	50	3e-05
10	Q4ZWT0:GLND_PSEU2 [Protein-PII] uridylyltransferase - Pseudomona...	50	4e-05
11	Q8UIF1:GLND_AGRT5 [Protein-PII] uridylyltransferase - Agrobacter...	49	6e-05
12	P56884:GLND_RHIME [Protein-PII] uridylyltransferase - Rhizobium ...	49	1e-04
13	Q886P5:GLND_PSESM [Protein-PII] uridylyltransferase - Pseudomona...	49	1e-04
14	Q48F57:GLND_PSE14 [Protein-PII] uridylyltransferase - Pseudomona...	49	1e-04
15	P36223:GLND_AZOVI [Protein-PII] uridylyltransferase - Azotobacte...	48	2e-04
16	Q8G312:GLND_BRUSU [Protein-PII] uridylyltransferase - Brucella suis	47	3e-04
17	Q8YES3:GLND_BRUME [Protein-PII] uridylyltransferase - Brucella m...	47	3e-04
18	Q57FN0:GLND_BRUAB [Protein-PII] uridylyltransferase - Brucella a...	47	3e-04
19	Q2YNZ1:GLND_BRUA2 [Protein-PII] uridylyltransferase - Brucella a...	47	3e-04
20	Q5LWE5:GLND_SILPO [Protein-PII] uridylyltransferase - Silicibact...	45	8e-04
21	Q3J5H6:GLND_RHOS4 [Protein-PII] uridylyltransferase - Rhodobacte...	45	8e-04
22	Q4KHH8:GLND_PSEF5 [Protein-PII] uridylyltransferase - Pseudomona...	45	8e-04
23	Q5NPH0:GLND_ZYMMO [Protein-PII] uridylyltransferase - Zymomonas ...	45	0.001
24	Q88MI2:GLND_PSEPK [Protein-PII] uridylyltransferase - Pseudomona...	45	0.001
25	Q89VX9:GLND_BRAJA [Protein-PII] uridylyltransferase - Bradyrhizo...	45	0.001
26	Q3KHB4:GLND_PSEPF [Protein-PII] uridylyltransferase - Pseudomona...	43	0.005
27	Q9Z9H0:GLND_PSEAE [Protein-PII] uridylyltransferase - Pseudomona...	40	0.034
28	Q3SWE0:GLND_NITWN [Protein-PII] uridylyltransferase - Nitrobacte...	40	0.034
29	P62223:GLND_RHOPA [Protein-PII] uridylyltransferase - Rhodopseud...	40	0.045
30	Q667I7:GLND_YERPS [Protein-PII] uridylyltransferase - Yersinia p...	39	0.10
31	Q8ZH68:GLND_YERPE [Protein-PII] uridylyltransferase - Yersinia p...	39	0.10
32	Q5WVX6:GLND_LEGPL [Protein-PII] uridylyltransferase - Legionella...	39	0.10
33	Q5ZUS2:GLND_LEGPH [Protein-PII] uridylyltransferase - Legionella...	39	0.10
34	Q5X4J1:GLND_LEGPA [Protein-PII] uridylyltransferase - Legionella...	39	0.10
35	Q6D8E5:GLND_ERWCT [Protein-PII] uridylyltransferase - Erwinia ca...	39	0.10
36	Q47F95:GLND_DECAR [Protein-PII] uridylyltransferase - Dechloromo...	37	0.22
37	Q31G41:GLND_THICR [Protein-PII] uridylyltransferase - Thiomicros...	37	0.38
38	O44006:KPYK_EIMTE Pyruvate kinase - Eimeria tenella	36	0.50
39	Q18KL6:PDXT_HALWD Glutamine amidotransferase subunit pdxT - Halo...	36	0.65
40	O69873:GLND_STRCO [Protein-PII] uridylyltransferase - Streptomyc...	36	0.65
41	Q470D5:GLND_RALEJ [Protein-PII] uridylyltransferase - Ralstonia ...	35	1.4
42	Q60BB2:GLND_METCA [Protein-PII] uridylyltransferase - Methylococ...	34	1.9
43	Q7VYD2:GLND_BORPE [Protein-PII] uridylyltransferase - Bordetella...	34	1.9
44	Q7WA62:GLND_BORPA [Protein-PII] uridylyltransferase - Bordetella...	34	1.9
45	Q7WJ96:GLND_BORBR [Protein-PII] uridylyltransferase - Bordetella...	34	1.9
46	Q2Y5Q1:GLND_NITMU [Protein-PII] uridylyltransferase - Nitrosospi...	34	2.5
47	Q9BKQ8:DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 hom...	34	2.5
48	Q6FAM5:GLND_ACIAD [Protein-PII] uridylyltransferase - Acinetobac...	33	5.5
49	A0JN53:RPAP1_BOVIN RNA polymerase II-associated protein 1 - Bos ...	32	9.4

>Q65SZ8:GLND_MANSM [Protein-PII] uridylyltransferase - Mannheimia succiniciproducens|
            (strain MBEL55E)
          Length = 875
 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
 Frame = +3

Query: 1083 VTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDAS-NNQAYQEFYVRH 1259
            V + N    G T V I CKDRP L    V  + + +  ++ A I  S +  A+  F V  
Sbjct: 688  VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747

Query: 1260 VDGSPMNTEAERL-----------RVIQCLEGAIERRV----------------SEGVKL 1358
            +DGS +  +  R+             +  L+G+   ++                +   ++
Sbjct: 748  LDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEM 807

Query: 1359 ELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKTIDSI 1535
            EL + DK GLL++V+ +F E +L++  A+++T G  A + F + ++ GE + ++   S+
Sbjct: 808  ELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALSERERQSL 866



 Score = 32.3 bits (72), Expect = 7.2
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +3

Query: 414 NDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVTDKEGMK 593
           N      T +++ + ++ G+L +V  V  +LNL I  A IT+ G    D F +T+ +G  
Sbjct: 798 NTEKTTHTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEA 857

Query: 594 LKDK 605
           L ++
Sbjct: 858 LSER 861

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>Q5FPT6:GLND_GLUOX [Protein-PII] uridylyltransferase - Gluconobacter oxydans|
            (Gluconobacter suboxydans)
          Length = 949

 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 32/94 (34%), Positives = 53/94 (56%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PP +++DN +S   T+++V   +  G+L +V   L   +L IS A+IT+ G   +DVF V
Sbjct: 855  PPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYV 914

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPA 674
             D  GMK+ D   +A++ + +  SL +     PA
Sbjct: 915  RDLLGMKITDPVRLARLRETLLASLTSAPVTTPA 948



 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 19/156 (12%)
 Frame = +3

Query: 507  NLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIEDYIRKSLGA---------DS 659
            ++V ++ +  SDG   +D F V D EG   ++   + ++   + ++L           D+
Sbjct: 782  SIVDARIHTLSDG-MALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDA 840

Query: 660  RYLPAQRRS----------VDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAE 809
             +    RR           +D  AS  H VIE+ G DRPG               + +A 
Sbjct: 841  SHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAH 900

Query: 810  IWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKERL 917
            I T+  R   V  V D   M  +TD  RL  ++E L
Sbjct: 901  ITTYGMRAVDVFYVRDLLGM-KITDPVRLARLRETL 935



 Score = 44.3 bits (103), Expect = 0.002
 Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 37/221 (16%)
 Frame = +3

Query: 987  THTERRLHQMMLSDGDCEEFHRHVPAQPQRPNVTVRNWN--DKGYTVVTIRCKDRPKLLF 1160
            T T+ R H  M+ D D             R  VTV  +   ++G T +T+ C D P L  
Sbjct: 723  TDTQMR-HARMVHDSD-----------RYRSPVTVEAYPIPERGVTELTVLCADHPGLFS 770

Query: 1161 DTVCTLTDLRYVVYHANIDA-SNNQAYQEFYVRHVDGSPMNTEAERLRVIQCLEGAIERR 1337
                 L      +  A I   S+  A   F+V+  +G       +  R+   +E A+  R
Sbjct: 771  QIAGALAVSGASIVDARIHTLSDGMALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGR 830

Query: 1338 --VSEGVK--------------------------------LELCSNDKVGLLSEVTRIFR 1415
              + +G++                                +E+   D+ GLL +VT    
Sbjct: 831  LDIRKGIEDASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALS 890

Query: 1416 ENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKTIDSIR 1538
              SL ++ A ++T G  AV+ FYVR    +++  K  D +R
Sbjct: 891  SASLQISSAHITTYGMRAVDVFYVR----DLLGMKITDPVR 927



 Score = 38.9 bits (89), Expect = 0.077
 Identities = 25/88 (28%), Positives = 38/88 (43%)
 Frame = +3

Query: 1053 HVPAQPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQ 1232
            HVP     P V + N     +TV+ +  +DRP LL D    L+     +  A+I     +
Sbjct: 853  HVP-----PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMR 907

Query: 1233 AYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
            A   FYVR + G  +       R+ + L
Sbjct: 908  AVDVFYVRDLLGMKITDPVRLARLRETL 935

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>Q8RQD1:GLND_AZOBR [Protein-PII] uridylyltransferase - Azospirillum brasilense|
          Length = 933

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 29/89 (32%), Positives = 53/89 (59%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PP +++DN++S   T+++V   +  G+L ++ + L +L L IS A I++ G   +DVF V
Sbjct: 844  PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSLGADS 659
             D  G+K+  +  +AQI + +  +L   S
Sbjct: 904  KDVFGLKVTHENKLAQIRERLLHALADPS 932



 Score = 45.1 bits (105), Expect = 0.001
 Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
 Frame = +3

Query: 378  IRKMNPPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYI-TSDGGWF 554
            +R   P ++    D     T V + + + +G+   +   L      I  A I T   G  
Sbjct: 726  LRDERPLTVNTRIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMA 785

Query: 555  MDVFNVTDKEG---MKLKDKAAIAQIEDYIRKSLGAD--------SRYLPAQRRS----- 686
            +DVF V D  G    +  DK  +A++   I K L            R  P   R+     
Sbjct: 786  LDVFTVQDAAGGGAFESGDK--LAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHV 843

Query: 687  -----VDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRV 851
                 +D  AS  H VIE+ G DRPG               + +A+I T+  +   V  V
Sbjct: 844  PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903

Query: 852  TDEDTMLAVTDAERLQMIKERLSYLL 929
             D    L VT   +L  I+ERL + L
Sbjct: 904  KDV-FGLKVTHENKLAQIRERLLHAL 928



 Score = 43.1 bits (100), Expect = 0.004
 Identities = 28/92 (30%), Positives = 44/92 (47%)
 Frame = +3

Query: 1053 HVPAQPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQ 1232
            HVP     P V + N     +TV+ +  +DRP LL+D    LT+L   +  A I     +
Sbjct: 842  HVP-----PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEK 896

Query: 1233 AYQEFYVRHVDGSPMNTEAERLRVIQCLEGAI 1328
            A   FYV+ V G  +  E +  ++ + L  A+
Sbjct: 897  AIDVFYVKDVFGLKVTHENKLAQIRERLLHAL 928



 Score = 38.9 bits (89), Expect = 0.077
 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG-EIVDQKTIDS 1532
            +E+   D+ GLL ++TR     +L ++ A++ST G  A++ FYV+   G ++  +  +  
Sbjct: 860  IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHENKLAQ 919

Query: 1533 IRK 1541
            IR+
Sbjct: 920  IRE 922

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>Q2RNG2:GLND_RHORT [Protein-PII] uridylyltransferase - Rhodospirillum rubrum (strain|
            ATCC 11170 / NCIB 8255)
          Length = 936

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 28/85 (32%), Positives = 49/85 (57%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PP +IVDN +S   T++++   +  G L  V + L D+ + IS A +++ G   +D F V
Sbjct: 825  PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSL 647
             D  GMK+  +A +AQI + +  ++
Sbjct: 885  KDVFGMKIVHRAKLAQIREALEAAI 909



 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
 Frame = +3

Query: 1050 RHVPAQPQR-------PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHA 1208
            R  P  P+R       P V V N   K +TV+ I  +DRP  L+     LTD+   +  A
Sbjct: 810  RQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSA 869

Query: 1209 NIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQCLEGAI----ERRVSEGVK 1355
             +     +    FYV+ V G  +   A+  ++ + LE AI     R+V EG +
Sbjct: 870  RVSTYGERVVDSFYVKDVFGMKIVHRAKLAQIREALEAAITQTVPRKVEEGAE 922



 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
 Frame = +3

Query: 495  LMDLNLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPA 674
            L  +N++ +K    SDGG  +D+F V   EG  ++ +  IA++   +R  L  D     A
Sbjct: 749  LAGVNILDAKITTMSDGG-ALDIFTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKA 807

Query: 675  QRRS------------------VDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVV 800
             RR                   VD  AS  H VIE+ G DRPG               + 
Sbjct: 808  LRRQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQIS 867

Query: 801  NAEIWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKERL 917
            +A + T+  RV     V D   M  V  A +L  I+E L
Sbjct: 868  SARVSTYGERVVDSFYVKDVFGMKIVHRA-KLAQIREAL 905



 Score = 37.7 bits (86), Expect = 0.17
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG-EIVDQKTIDS 1532
            +E+   D+ G L  VTR   + ++ ++ A VST G   V++FYV+   G +IV +  +  
Sbjct: 841  IEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKIVHRAKLAQ 900

Query: 1533 IRK 1541
            IR+
Sbjct: 901  IRE 903

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>Q53245:GLND_RHITR [Protein-PII] uridylyltransferase - Rhizobium tropici|
          Length = 948

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PPS+I+ N  S   T+++V   +  G+L E+  VL DL+L I  A IT+ G   +D F V
Sbjct: 825  PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPAQRRSVDVAASADHNV-IELTGTDR 743
             D  G K+ ++   A I   ++  +  +   +  +  S  +A +A   V +E + T++
Sbjct: 885  ADLVGQKISNENRRAYITARLKAVMAGEEDEMRERMPSGIIAPAATRGVAVEKSDTEK 942



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P+V + N     +TV+ + C DRP LL +    L+DL   +  A I     +    FYV 
Sbjct: 826  PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885

Query: 1257 HVDGSPMNTEAERLRVIQCLEGAI 1328
             + G  ++ E  R  +   L+  +
Sbjct: 886  DLVGQKISNENRRAYITARLKAVM 909



 Score = 40.0 bits (92), Expect = 0.034
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 1374 DKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQK 1520
            D+ GLLSE+T +  + SL +  A ++T G   ++TFYV    G+ +  +
Sbjct: 847  DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKISNE 895

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>Q8EGH8:GLND_SHEON [Protein-PII] uridylyltransferase - Shewanella oneidensis|
          Length = 861

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 30/176 (17%)
 Frame = +3

Query: 1065 QPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDAS-NNQAYQ 1241
            Q   P V V     +G T + + C+DRPKL    +  L +    V+ ANI  S +N A  
Sbjct: 658  QVDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALD 717

Query: 1242 EFYVRHVDGSPMNTEAERLRVIQCLEGAIE---------RRVSEGVK------------- 1355
             F +   DG P++  +    + + LE A+          R++S  +K             
Sbjct: 718  TFVILEQDGEPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLES 777

Query: 1356 -------LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG 1502
                   +EL + D  GLL++V  IF   + T+  A+++T G  A + F ++++ G
Sbjct: 778  NRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLSAKITTIGERAEDFFILQTNDG 833

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>Q9RAE4:GLND_RHILV [Protein-PII] uridylyltransferase - Rhizobium leguminosarum bv.|
            viciae
          Length = 944

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PPS+ + N  S   T+++V   +  G+L E+  VL DL+L I  A IT+ G   +D F V
Sbjct: 824  PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883

Query: 573  TDKEGMKL-----------KDKAAIAQIEDYIRKSL 647
            TD  G K+           + KA +A+ ED +R+ +
Sbjct: 884  TDLVGQKISGDSKRANITARMKAVMAEEEDELRERM 919



 Score = 44.7 bits (104), Expect = 0.001
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P+V + N     +TV+ + C DRP LL +    L+DL   +  A I     +    FYV 
Sbjct: 825  PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884

Query: 1257 HVDGSPMNTEAERLRVIQCLEGAIERRVSE 1346
             + G  ++ +++R  +   ++  +     E
Sbjct: 885  DLVGQKISGDSKRANITARMKAVMAEEEDE 914



 Score = 39.7 bits (91), Expect = 0.045
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +3

Query: 1374 DKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
            D+ GLLSE+T +  + SL +  A ++T G   ++TFYV    G+
Sbjct: 846  DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQ 889

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>Q9AC53:GLND_CAUCR [Protein-PII] uridylyltransferase - Caulobacter crescentus|
            (Caulobacter vibrioides)
          Length = 940

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 30/95 (31%), Positives = 48/95 (50%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            PS+ +DND+S DAT+V+    +  G+L  + + L D  L I  A+I   G   +D F V 
Sbjct: 834  PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPAQR 680
              EG K+ D   +  ++  +  +L  +    PA R
Sbjct: 894  TTEGGKVTDTRKLNALKADLLAALEQNEASAPAAR 928



 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
 Frame = +3

Query: 1122 VTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNN-QAYQEFYVRHVDGSPMNTEAERL 1298
            V I  KDR  L  D    ++ L   V  A +  S   QA   FYV+ V G+P   E  R 
Sbjct: 738  VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797

Query: 1299 --RVIQCLEGAIE--------RRVSEGVK----------------------LELCSNDKV 1382
              R+   LE A +        RR SE  +                      +E    D+ 
Sbjct: 798  LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857

Query: 1383 GLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSS-AGEIVDQKTIDSIR 1538
            GLL  + +   +++L++  A +   G  AV+ FYV+++  G++ D + +++++
Sbjct: 858  GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKVTDTRKLNALK 910



 Score = 41.6 bits (96), Expect = 0.012
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P+VT+ N      TVV    +DRP LL     TL D    +  A+ID    +A   FYV+
Sbjct: 834  PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893

Query: 1257 HVDGSPMNTEAERLRVIQC-LEGAIER 1334
              +G  + T+  +L  ++  L  A+E+
Sbjct: 894  TTEGGKV-TDTRKLNALKADLLAALEQ 919



 Score = 39.7 bits (91), Expect = 0.045
 Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 18/196 (9%)
 Frame = +3

Query: 426  ADATIVKVGSANEYGILLEVIQVLMDLN-LVISKAYITSDGGWFMDVFNVTDKEGMKL-- 596
            ++A  V + + +  G+  ++   +  L   V+     TS  G  +DVF V D  G     
Sbjct: 733  SNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGC 792

Query: 597  KDKAAIAQIEDYIRKSLGADSRYLPAQRRS---------------VDVAASADHNVIELT 731
            ++  A+ ++ D +  +   D+  +  +R S               +D  AS D  V+E +
Sbjct: 793  ENPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEAS 852

Query: 732  GTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKE 911
            G DRPG              ++ +A I  +  R      V   +    VTD  +L  +K 
Sbjct: 853  GRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGG-KVTDTRKLNALKA 911

Query: 912  RLSYLLRGNNLSRGAA 959
             L   L  N  S  AA
Sbjct: 912  DLLAALEQNEASAPAA 927

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>Q98C27:GLND_RHILO [Protein-PII] uridylyltransferase - Rhizobium loti (Mesorhizobium|
            loti)
          Length = 933

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 29/85 (34%), Positives = 46/85 (54%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PP   + N  S   ++++V   +  G+L E+   L DL+L I+ A+IT+ G   +D F V
Sbjct: 833  PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSL 647
            TD  G K+   A IA I + +  +L
Sbjct: 893  TDLTGQKIDSPARIATIRNRLMATL 917



 Score = 41.6 bits (96), Expect = 0.012
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P   +RN     ++V+ +   DRP LL +   TL+DL   +  A+I     +    FYV 
Sbjct: 834  PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893

Query: 1257 HVDG----SPMNTEAERLRVIQCLEGAIERR 1337
             + G    SP      R R++  LEG    R
Sbjct: 894  DLTGQKIDSPARIATIRNRLMATLEGIAPER 924



 Score = 40.8 bits (94), Expect = 0.020
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVD 1514
            +E+   D+ GLLSE+T    + SL +  A ++T G   ++TFYV    G+ +D
Sbjct: 849  IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKID 901



 Score = 33.9 bits (76), Expect = 2.5
 Identities = 32/118 (27%), Positives = 45/118 (38%)
 Frame = +3

Query: 621  IEDYIRKSLGADSRYLPAQRRSVDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVV 800
            IE   +   GA    +P  R  +    S   +VIE+ G DRPG              ++ 
Sbjct: 817  IEKRTKPKRGAKVFKIPP-RAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIA 875

Query: 801  NAEIWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKERLSYLLRGNNLSRGAAMAEAS 974
            +A I T   +V     VTD  T   +    R+  I+ RL   L G    RG     A+
Sbjct: 876  SAHITTFGEKVIDTFYVTDL-TGQKIDSPARIATIRNRLMATLEGIAPERGGKAKAAA 932

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>Q4ZWT0:GLND_PSEU2 [Protein-PII] uridylyltransferase - Pseudomonas syringae pv. syringae|
            (strain B728a)
          Length = 898

 Score = 49.7 bits (117), Expect = 4e-05
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
 Frame = +3

Query: 294  GSQSSPPAMSMD--EGYGPTWDSDDEYDNFIRKMNP---------PSIIVDNDSSADATI 440
            GS  + P    D  EG      + D+Y   I++  P         P + + ND+    T+
Sbjct: 756  GSIGNNPERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTV 815

Query: 441  VKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQ 620
            +++ + +  G+L  + ++ ++ +L +  A I + G    DVF +TD     L D     Q
Sbjct: 816  LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875

Query: 621  IEDYIRKSLGADS 659
            ++D I K L  +S
Sbjct: 876  LQDAIVKQLSVNS 888



 Score = 37.4 bits (85), Expect = 0.22
 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 34/161 (21%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNT 1283
            +G T + I   D+      TV  +  L   ++ A I  S+++   + Y V   +G  +  
Sbjct: 701  EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760

Query: 1284 EAERLRVIQCLEGA-------------IERRVSEGVK--------------------LEL 1364
              ER++ I+  EG              I+RRV   +K                    LEL
Sbjct: 761  NPERIQDIR--EGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLEL 818

Query: 1365 CSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             + D+ GLL+ + +IF E  L++  A+++T G    + F++
Sbjct: 819  LAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859



 Score = 33.5 bits (75), Expect = 3.2
 Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKL-KDKA 608
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D EG  +  +  
Sbjct: 704  TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGNNPE 763

Query: 609  AIAQIEDYIRKSLGADSRY-------LPAQRRSVDVAASAD-HN-------VIELTGTDR 743
             I  I + + ++L     Y       +P Q +    A     HN       V+EL   DR
Sbjct: 764  RIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDR 823

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
            PG              ++ NA+I T   RV  V  +TD
Sbjct: 824  PGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD 861

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>Q8UIF1:GLND_AGRT5 [Protein-PII] uridylyltransferase - Agrobacterium tumefaciens (strain|
            C58 / ATCC 33970)
          Length = 942

 Score = 49.3 bits (116), Expect = 6e-05
 Identities = 24/90 (26%), Positives = 41/90 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P+VT+ N     +TV+ + C DRP LL D    + DL   ++ A I     +    FYV 
Sbjct: 827  PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886

Query: 1257 HVDGSPMNTEAERLRVIQCLEGAIERRVSE 1346
             + G  +  +  +  + Q L+  +  +  E
Sbjct: 887  DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916



 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PPS+ + N  S   T+++V   +  G+L ++  V+ DL+L I  A IT+ G   +D F V
Sbjct: 826  PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885

Query: 573  TDKEGMKLKD---KAAIAQ 620
            TD  G K+ +   +A+IAQ
Sbjct: 886  TDLFGQKVTNDNRQASIAQ 904



 Score = 35.8 bits (81), Expect = 0.65
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +3

Query: 1374 DKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIV 1511
            D+ GLL+++T +  + SL +  A ++T G   ++TFYV    G+ V
Sbjct: 848  DRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893

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>P56884:GLND_RHIME [Protein-PII] uridylyltransferase - Rhizobium meliloti (Sinorhizobium|
            meliloti)
          Length = 949

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + + N  S   T+++V   +  G+L EV  VL DL+L I+ A+IT+ G   +D F VT
Sbjct: 831  PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890

Query: 576  DKEGMKL 596
            D  G K+
Sbjct: 891  DLVGSKI 897



 Score = 43.5 bits (101), Expect = 0.003
 Identities = 24/90 (26%), Positives = 41/90 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P VT+ N     +TV+ +   DR  LL +    L+DL   +  A+I     +    FYV 
Sbjct: 831  PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890

Query: 1257 HVDGSPMNTEAERLRVIQCLEGAIERRVSE 1346
             + GS + +E  ++ +   L+  +   V E
Sbjct: 891  DLVGSKITSENRQMNIAARLKAVLAGEVDE 920



 Score = 40.8 bits (94), Expect = 0.020
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG 1502
            +E+   D+ GLLSEVT +  + SL +  A ++T G   ++TFYV    G
Sbjct: 846  IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVG 894

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>Q886P5:GLND_PSESM [Protein-PII] uridylyltransferase - Pseudomonas syringae pv. tomato|
          Length = 898

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
 Frame = +3

Query: 294  GSQSSPPAMSMD--EGYGPTWDSDDEYDNFIRKMNP---------PSIIVDNDSSADATI 440
            GS  + P    D  +G      + D+Y   I++  P         P + + ND+    T+
Sbjct: 756  GSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTV 815

Query: 441  VKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQ 620
            +++ + +  G+L  + ++ ++ +L +  A I + G    DVF +TD     L D    +Q
Sbjct: 816  LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875

Query: 621  IEDYIRKSLGADS 659
            +++ I K L  +S
Sbjct: 876  LQEAIVKQLSVNS 888



 Score = 38.5 bits (88), Expect = 0.10
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYV--RHVDGSPMN 1280
            +G T + I   D+      TV  +  L   ++ A I  S++Q   + Y+   H  GS  N
Sbjct: 701  EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760

Query: 1281 TE----------AERLRVIQCLEGAIERRVSEGVK--------------------LELCS 1370
                         E LR        I+RRV   +K                    LEL +
Sbjct: 761  NPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLA 820

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ + +IF E  L++  A+++T G    + F++
Sbjct: 821  PDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859



 Score = 36.2 bits (82), Expect = 0.50
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKL-KDKA 608
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D EG  +  +  
Sbjct: 704  TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGNNPE 763

Query: 609  AIAQIEDYIRKSLGADSRY-------LPAQRRSVDVAASAD-HN-------VIELTGTDR 743
             I  I D + ++L     Y       +P Q +    A     HN       V+EL   DR
Sbjct: 764  RIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDR 823

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKERLSY 923
            PG              ++ NA+I T   RV  V  +TD +    ++D +    ++E +  
Sbjct: 824  PGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQ-PLSDPQLCSQLQEAIVK 882

Query: 924  LLRGNN 941
             L  N+
Sbjct: 883  QLSVNS 888

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>Q48F57:GLND_PSE14 [Protein-PII] uridylyltransferase - Pseudomonas syringae pv.|
            phaseolicola (strain 1448A / Race 6)
          Length = 898

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
 Frame = +3

Query: 360  DEYDNFIRKMNP---------PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNL 512
            D+Y   I++  P         P + + ND+    T++++ + +  G+L  + ++ ++ +L
Sbjct: 780  DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839

Query: 513  VISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIEDYIRKSLGADS 659
             +  A I + G    DVF +TD     L D    +Q++D I K L  +S
Sbjct: 840  SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNS 888



 Score = 36.2 bits (82), Expect = 0.50
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNT 1283
            +G T + I   D+      TV  +  L   ++ A I  S+++   + Y V   +G  +  
Sbjct: 701  EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760

Query: 1284 EAERLRVI-----QCLEGA------IERRVSEGVK--------------------LELCS 1370
              ER++ I     + L         I+RRV   +K                    LEL +
Sbjct: 761  NPERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLA 820

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ + +IF E  L++  A+++T G    + F++
Sbjct: 821  PDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859



 Score = 35.4 bits (80), Expect = 0.85
 Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 17/158 (10%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKLKDKAA 611
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D EG  + D   
Sbjct: 704  TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNPE 763

Query: 612  -IAQIEDYIRKSLGADSRY-------LPAQRRSVDVAASAD-HN-------VIELTGTDR 743
             + +I + + ++L     Y       +P Q +    A     HN       V+EL   DR
Sbjct: 764  RVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDR 823

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
            PG              ++ NA+I T   RV  V  +TD
Sbjct: 824  PGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD 861

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>P36223:GLND_AZOVI [Protein-PII] uridylyltransferase - Azotobacter vinelandii|
          Length = 899

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 26/98 (26%), Positives = 48/98 (48%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + + ND+    TI+++ + +  G+L  + ++ +D +L +  A I + G    DVF VT
Sbjct: 802  PQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVT 861

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPAQRRSV 689
            D     L D    A+++  I + L     Y+   R S+
Sbjct: 862  DAHNQPLSDPELCARLQLAIAEQLADGDSYIQPSRISI 899



 Score = 38.5 bits (88), Expect = 0.10
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNT 1283
            +G T + I   D+      TV  +  L   ++ A +  S +Q   + Y V   DG  +  
Sbjct: 702  EGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGGSIGN 761

Query: 1284 EAERLR-----VIQCLEGA------IERRVSEGVK--------------------LELCS 1370
               R++     +++ L         I+RRV   +K                    LE+ +
Sbjct: 762  NPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIA 821

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ + +IF +  L++  A+++T G    + F+V
Sbjct: 822  PDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFV 860



 Score = 33.5 bits (75), Expect = 3.2
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
 Frame = +3

Query: 432  ATIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKL-KDK 605
            AT + + + +++      +  +  LNL I  A  ITS   + +D + V D +G  +  + 
Sbjct: 704  ATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGGSIGNNP 763

Query: 606  AAIAQIEDYIRKSLGADSRY-------LPAQRRSVDVA--------ASADHNVIELTGTD 740
            A I +I   + ++L   + Y       +P Q +    A        A     ++E+   D
Sbjct: 764  ARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPD 823

Query: 741  RPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAE---RLQM-IK 908
            RPG              ++ NA+I T   RV  V  VTD      ++D E   RLQ+ I 
Sbjct: 824  RPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHNQ-PLSDPELCARLQLAIA 882

Query: 909  ERLS 920
            E+L+
Sbjct: 883  EQLA 886

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>Q8G312:GLND_BRUSU [Protein-PII] uridylyltransferase - Brucella suis|
          Length = 934

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L E+  ++ DL+L I+ A+IT+ G   +D F VT
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADS 659
            D  G K+ +      I+  +   LGA++
Sbjct: 894  DLVGHKISNATRQGNIKRKLLALLGAEN 921



 Score = 38.1 bits (87), Expect = 0.13
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKT 1523
            +E+   D+ GLLSE+T +  + SL +  A ++T G   +++FYV    G  +   T
Sbjct: 849  IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904



 Score = 33.9 bits (76), Expect = 2.5
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P V + N     +TV+ +   DRP LL +    ++DL   +  A+I     +    FYV 
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 1257 HVDG 1268
             + G
Sbjct: 894  DLVG 897

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>Q8YES3:GLND_BRUME [Protein-PII] uridylyltransferase - Brucella melitensis|
          Length = 934

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L E+  ++ DL+L I+ A+IT+ G   +D F VT
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADS 659
            D  G K+ +      I+  +   LGA++
Sbjct: 894  DLVGHKISNATRQGNIKRKLLALLGAEN 921



 Score = 38.1 bits (87), Expect = 0.13
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKT 1523
            +E+   D+ GLLSE+T +  + SL +  A ++T G   +++FYV    G  +   T
Sbjct: 849  IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904



 Score = 33.9 bits (76), Expect = 2.5
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P V + N     +TV+ +   DRP LL +    ++DL   +  A+I     +    FYV 
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 1257 HVDG 1268
             + G
Sbjct: 894  DLVG 897



 Score = 32.0 bits (71), Expect = 9.4
 Identities = 40/164 (24%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
 Frame = +3

Query: 507  NLVISKAYITSDGGWFMDV-----FNVTDKEGMK-----------LKDKAAIAQIEDYIR 638
            N+V ++ + TSDG     +     F+  D E  +           L  KA +  +     
Sbjct: 762  NIVDAQIFTTSDGRALDTILISREFDTDDDERRRAERVGKVIEDVLSGKAHLPDMLAKRT 821

Query: 639  KSLGADSRYLPAQRRSVDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWT 818
            K   A   +    R  ++   S    VIE+ G DRPG              ++ +A I T
Sbjct: 822  KPKKAARAFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITT 881

Query: 819  HNTRVAAVMRVTDEDTMLAVTDAERLQMIKERLSYLLRGNNLSR 950
               +V     VTD      +++A R   IK +L  LL   N +R
Sbjct: 882  FGEKVIDSFYVTDL-VGHKISNATRQGNIKRKLLALLGAENGAR 924

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>Q57FN0:GLND_BRUAB [Protein-PII] uridylyltransferase - Brucella abortus|
          Length = 934

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L E+  ++ DL+L I+ A+IT+ G   +D F VT
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADS 659
            D  G K+ +      I+  +   LGA++
Sbjct: 894  DLVGHKISNATRQGNIKRKLLALLGAEN 921



 Score = 38.1 bits (87), Expect = 0.13
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKT 1523
            +E+   D+ GLLSE+T +  + SL +  A ++T G   +++FYV    G  +   T
Sbjct: 849  IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904



 Score = 33.9 bits (76), Expect = 2.5
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P V + N     +TV+ +   DRP LL +    ++DL   +  A+I     +    FYV 
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 1257 HVDG 1268
             + G
Sbjct: 894  DLVG 897



 Score = 32.0 bits (71), Expect = 9.4
 Identities = 40/164 (24%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
 Frame = +3

Query: 507  NLVISKAYITSDGGWFMDV-----FNVTDKEGMK-----------LKDKAAIAQIEDYIR 638
            N+V ++ + TSDG     +     F+  D E  +           L  KA +  +     
Sbjct: 762  NIVDAQIFTTSDGRALDTILISREFDTDDDERRRAERVGKVIEDVLSGKAHLPDMLAKRT 821

Query: 639  KSLGADSRYLPAQRRSVDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWT 818
            K   A   +    R  ++   S    VIE+ G DRPG              ++ +A I T
Sbjct: 822  KPKKAARAFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITT 881

Query: 819  HNTRVAAVMRVTDEDTMLAVTDAERLQMIKERLSYLLRGNNLSR 950
               +V     VTD      +++A R   IK +L  LL   N +R
Sbjct: 882  FGEKVIDSFYVTDL-VGHKISNATRQGNIKRKLLALLGAENGAR 924

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>Q2YNZ1:GLND_BRUA2 [Protein-PII] uridylyltransferase - Brucella abortus (strain 2308)|
          Length = 934

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L E+  ++ DL+L I+ A+IT+ G   +D F VT
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADS 659
            D  G K+ +      I+  +   LGA++
Sbjct: 894  DLVGHKISNATRQGNIKRKLLALLGAEN 921



 Score = 38.1 bits (87), Expect = 0.13
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKT 1523
            +E+   D+ GLLSE+T +  + SL +  A ++T G   +++FYV    G  +   T
Sbjct: 849  IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNAT 904



 Score = 33.9 bits (76), Expect = 2.5
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 1077 PNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVR 1256
            P V + N     +TV+ +   DRP LL +    ++DL   +  A+I     +    FYV 
Sbjct: 834  PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

Query: 1257 HVDG 1268
             + G
Sbjct: 894  DLVG 897



 Score = 32.0 bits (71), Expect = 9.4
 Identities = 40/164 (24%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
 Frame = +3

Query: 507  NLVISKAYITSDGGWFMDV-----FNVTDKEGMK-----------LKDKAAIAQIEDYIR 638
            N+V ++ + TSDG     +     F+  D E  +           L  KA +  +     
Sbjct: 762  NIVDAQIFTTSDGRALDTILISREFDTDDDERRRAERVGKVIEDVLSGKAHLPDMLAKRT 821

Query: 639  KSLGADSRYLPAQRRSVDVAASADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWT 818
            K   A   +    R  ++   S    VIE+ G DRPG              ++ +A I T
Sbjct: 822  KPKKAARAFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITT 881

Query: 819  HNTRVAAVMRVTDEDTMLAVTDAERLQMIKERLSYLLRGNNLSR 950
               +V     VTD      +++A R   IK +L  LL   N +R
Sbjct: 882  FGEKVIDSFYVTDL-VGHKISNATRQGNIKRKLLALLGAENGAR 924

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>Q5LWE5:GLND_SILPO [Protein-PII] uridylyltransferase - Silicibacter pomeroyi|
          Length = 908

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 26/85 (30%), Positives = 45/85 (52%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            P  I  DN+ S   TI++V + +  G+L ++ + L   N+ I+ A I + G   +D F V
Sbjct: 814  PTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYV 873

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSL 647
             D  G+K   +A    +E  +RK++
Sbjct: 874  KDMFGLKYHSEAKQRTLETKLRKAI 898



 Score = 42.7 bits (99), Expect = 0.005
 Identities = 24/92 (26%), Positives = 45/92 (48%)
 Frame = +3

Query: 1080 NVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVRH 1259
            ++T  N     YT++ +  +DRP LL+D    L      + +A I     Q    FYV+ 
Sbjct: 816  HITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKD 875

Query: 1260 VDGSPMNTEAERLRVIQCLEGAIERRVSEGVK 1355
            + G   ++EA++    + LE  + + ++EG +
Sbjct: 876  MFGLKYHSEAKQ----RTLETKLRKAITEGAE 903



 Score = 36.2 bits (82), Expect = 0.50
 Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 19/171 (11%)
 Frame = +3

Query: 402  IIVDNDSSADATIVKVGSANEYGILLEVIQVL--MDLNLVISKAYITSDGGWFMDVFNVT 575
            I +D D   DAT      A+  GI   +   L  +  N+V +++Y T DG +  D F + 
Sbjct: 707  IRLDPDEDRDATRACFAMADHPGIFSRMAGALALVGANVVDARSYTTKDG-YVTDAFWIQ 765

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGAD--------SRYLPAQRRSV---------DVAAS 704
            D EG    + A + ++   I K+L  +        SR    +R            D   S
Sbjct: 766  DAEGHPY-EAARLPRLSQMILKTLKGEVVARDALKSRDKIKKREKAFNVPTHITFDNEGS 824

Query: 705  ADHNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
              + +IE+   DRPG               + NA I T+  +V     V D
Sbjct: 825  DIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKD 875



 Score = 32.3 bits (72), Expect = 7.2
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG 1502
            +E+ + D+ GLL ++ R     ++ +  A ++T G   V++FYV+   G
Sbjct: 830  IEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFG 878

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>Q3J5H6:GLND_RHOS4 [Protein-PII] uridylyltransferase - Rhodobacter sphaeroides (strain|
            ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
          Length = 930

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 26/85 (30%), Positives = 45/85 (52%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            P  I  DN+ S   TI++V + +  G+L ++ + L   N+ I+ A I + G   +D F V
Sbjct: 837  PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSL 647
             D  G+KL  K     +E  +R+++
Sbjct: 897  KDMFGLKLHQKNRQETLEKKLRQAI 921



 Score = 38.5 bits (88), Expect = 0.10
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQK 1520
            +E+ + D+ GLL ++TR    N++ +  A ++T G   V++FYV+   G  + QK
Sbjct: 853  IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKLHQK 907



 Score = 35.8 bits (81), Expect = 0.65
 Identities = 21/81 (25%), Positives = 38/81 (46%)
 Frame = +3

Query: 1113 YTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVRHVDGSPMNTEAE 1292
            YT++ +  +DRP LL+D   TL      +  A I     Q    FYV+ + G  ++ +  
Sbjct: 850  YTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKLHQKNR 909

Query: 1293 RLRVIQCLEGAIERRVSEGVK 1355
            +    + LE  + + + EG +
Sbjct: 910  Q----ETLEKKLRQAIVEGAE 926

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>Q4KHH8:GLND_PSEF5 [Protein-PII] uridylyltransferase - Pseudomonas fluorescens (strain|
            Pf-5 / ATCC BAA-477)
          Length = 900

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
 Frame = +3

Query: 360  DEYDNFIRKMNP---------PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNL 512
            D+Y   I++  P         P + + ND+    T++++ + +  G+L  + ++ ++ +L
Sbjct: 781  DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840

Query: 513  VISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIEDYIRKSL 647
             +  A I + G    DVF +TD     L D    ++++D I + L
Sbjct: 841  SLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQDAIVEQL 885



 Score = 40.0 bits (92), Expect = 0.034
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYV------RHVDG 1268
            +G T + I   D+      TV  +  L   ++ A I  S++Q   + Y+        +  
Sbjct: 702  EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGN 761

Query: 1269 SPMNTEAERLRVIQCLEGA------IERRVSEGVK--------------------LELCS 1370
            +P   E  R  +   L         I+RRV   +K                    LEL +
Sbjct: 762  NPQRVEQIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSA 821

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ + +IF E  L++  A+++T G    + F++
Sbjct: 822  PDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860



 Score = 33.5 bits (75), Expect = 3.2
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKL-KDKA 608
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D +G  +  +  
Sbjct: 705  TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGNNPQ 764

Query: 609  AIAQIEDYIRKSLGADSRY-------LPAQRRSVDVAASAD-HN-------VIELTGTDR 743
             + QI   +  +L     Y       +P Q +    A     HN       V+EL+  DR
Sbjct: 765  RVEQIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDR 824

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
            PG              ++ NA+I T   RV  V  +TD
Sbjct: 825  PGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD 862

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>Q5NPH0:GLND_ZYMMO [Protein-PII] uridylyltransferase - Zymomonas mobilis|
          Length = 926

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 65/275 (23%), Positives = 106/275 (38%), Gaps = 9/275 (3%)
 Frame = +3

Query: 549  WFMDVFNVTDKEGMKLKDKAAIAQIEDYI----RKSLGADSRYLPAQRRSVDVAASADHN 716
            W  D+F+   K   +L D    ++  D I    ++ +  DS+      R  ++ A  D  
Sbjct: 681  WDNDLFHALVK---RLPDDYWFSERTDVIAANMQQIIDTDSKGQSISVRGHEMPAY-DAT 736

Query: 717  VIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAERL 896
            +I L   D PG              N+++A I  H TR    M              + L
Sbjct: 737  MISLYAIDHPGFFYRISGAIHATGGNILDARI--HTTRDGMAM--------------DNL 780

Query: 897  QMIKERLSYLLRGNNLSRGAAMAEASGTSATHTERRLHQM---MLSDGDCEEFHRHVPAQ 1067
             +   +   +  G +L+R     E + TS   +  +L  +   +   G  + FH      
Sbjct: 781  LVQNSQGGMIKSGEHLNRMMQAIEDAATSHIRSSNKLAALRPPLFWRG--KAFH------ 832

Query: 1068 PQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEF 1247
               P V + N     +TV+ +  +DRP LL D  C L + R  +  A+I     +A   F
Sbjct: 833  -VEPLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVF 891

Query: 1248 YVRHVDGSPMNTEAERLRVIQ--CLEGAIERRVSE 1346
            YV  +    + T   RL+ I+   L  A   R+SE
Sbjct: 892  YVSDLFSHKI-TNQNRLKAIEKRLLAAADAARISE 925

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>Q88MI2:GLND_PSEPK [Protein-PII] uridylyltransferase - Pseudomonas putida (strain|
            KT2440)
          Length = 900

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 22/87 (25%), Positives = 47/87 (54%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            PP + + ND+    TI+++ + +  G+L  + ++ ++ +L +  A I + G    DVF +
Sbjct: 801  PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860

Query: 573  TDKEGMKLKDKAAIAQIEDYIRKSLGA 653
            TD +   L D    +++++ I + L A
Sbjct: 861  TDADNQPLSDPQLCSRLQEAIVQQLQA 887



 Score = 42.0 bits (97), Expect = 0.009
 Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 17/178 (9%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKLKDKAA 611
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D +G  + D   
Sbjct: 705  TQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQ 764

Query: 612  -IAQIEDYIRKSLGADSRY-------LPAQRRSVDVA--------ASADHNVIELTGTDR 743
             + QI D + ++L     Y       +P Q +  D          A     ++E+T  DR
Sbjct: 765  RVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPDR 824

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAERLQMIKERL 917
            PG              ++ NA+I T   RV  V  +TD D    ++D +    ++E +
Sbjct: 825  PGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQ-PLSDPQLCSRLQEAI 881



 Score = 39.3 bits (90), Expect = 0.059
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNT 1283
            +G T + I   D+      TV  ++ L   ++ A I  S++Q   + Y V   DG  +  
Sbjct: 702  EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761

Query: 1284 EAERLRVI-----------QCLEGAIERRVSEGVK--------------------LELCS 1370
              +R++ I           +     I+RRV   +K                    LE+ +
Sbjct: 762  NPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITA 821

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ + RIF E  L++  A+++T G    + F++
Sbjct: 822  PDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860

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>Q89VX9:GLND_BRAJA [Protein-PII] uridylyltransferase - Bradyrhizobium japonicum|
          Length = 929

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 25/93 (26%), Positives = 45/93 (48%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L E+   +  LNL I+ A++ + G    DVF VT
Sbjct: 836  PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGADSRYLPA 674
            D  G ++      + I+  +   +  D    PA
Sbjct: 896  DLLGAQINAPTRQSAIKSALTHVMAGDKAVQPA 928



 Score = 41.6 bits (96), Expect = 0.012
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +3

Query: 1077 PNVTVRN-WNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYV 1253
            P VT+ N W+D+ YTV+ +   DRP LL++    ++ L   +  A++     +A   FYV
Sbjct: 836  PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYV 894

Query: 1254 RHVDGSPMNTEAERLRVIQCL 1316
              + G+ +N    +  +   L
Sbjct: 895  TDLLGAQINAPTRQSAIKSAL 915



 Score = 34.3 bits (77), Expect = 1.9
 Identities = 23/83 (27%), Positives = 36/83 (43%)
 Frame = +3

Query: 711  HNVIELTGTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTDEDTMLAVTDAE 890
            + VIE++G DRPG              N+ +A + T   R   V  VTD      +    
Sbjct: 848  YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPT 906

Query: 891  RLQMIKERLSYLLRGNNLSRGAA 959
            R   IK  L++++ G+   + AA
Sbjct: 907  RQSAIKSALTHVMAGDKAVQPAA 929



 Score = 34.3 bits (77), Expect = 1.9
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGEIVDQKTIDSI 1535
            +E+   D+ GLL E+T    + +L +  A V+T G  A + FYV    G  ++  T  S 
Sbjct: 851  IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910

Query: 1536 RK 1541
             K
Sbjct: 911  IK 912

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>Q3KHB4:GLND_PSEPF [Protein-PII] uridylyltransferase - Pseudomonas fluorescens (strain|
            PfO-1)
          Length = 900

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 21/87 (24%), Positives = 44/87 (50%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + + ND+    T++++ + +  G+L  V  + ++ +L +  A I + G    DVF +T
Sbjct: 802  PQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFIT 861

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSLGAD 656
            D     L D    ++++D I + L  +
Sbjct: 862  DAHNQPLSDPLLCSRLQDAIVEQLSVN 888



 Score = 40.0 bits (92), Expect = 0.034
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 17/158 (10%)
 Frame = +3

Query: 435  TIVKVGSANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKLKDKAA 611
            T + + + +++      +  +  LNL I  A  ITS   + +D + V D +G  + D   
Sbjct: 705  TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPV 764

Query: 612  -IAQIEDYIRKSLGADSRY-------LPAQRRSVDVAASAD-HN-------VIELTGTDR 743
             + QI D + ++L   + Y       +P Q +    A     HN       V+ELT  DR
Sbjct: 765  RVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDR 824

Query: 744  PGXXXXXXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
            PG              ++ NA+I T   RV  V  +TD
Sbjct: 825  PGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD 862



 Score = 37.0 bits (84), Expect = 0.29
 Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
 Frame = +3

Query: 1107 KGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNT 1283
            +G T + I   D+      TV  +  L   ++ A +  S++Q   + Y V   DG  +  
Sbjct: 702  EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761

Query: 1284 EAERLRVI-----QCLEGA------IERRVSEGVK--------------------LELCS 1370
               R++ I     + L         I+RRV   +K                    LEL +
Sbjct: 762  NPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTA 821

Query: 1371 NDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
             D+ GLL+ V  IF E  L++  A+++T G    + F++
Sbjct: 822  PDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFI 860

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>Q9Z9H0:GLND_PSEAE [Protein-PII] uridylyltransferase - Pseudomonas aeruginosa|
          Length = 900

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
 Frame = +3

Query: 330  EGYGPTWDSDDEYDNFIRKMNP---------PSIIVDNDSSADATIVKVGSANEYGILLE 482
            EG      + D+Y   I++  P         P + +  D+    ++++V + +  G+L  
Sbjct: 771  EGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLAR 830

Query: 483  VIQVLMDLNLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIEDYIRKSLGADS 659
            +  + +D +L +  A I + G    DVF +TD     L D     +++  + + L  D+
Sbjct: 831  IGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAALVEQLSQDN 889



 Score = 37.0 bits (84), Expect = 0.29
 Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 34/162 (20%)
 Frame = +3

Query: 1122 VTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFY-VRHVDGSPMNTEAERL 1298
            + I   D+      TV  +  L   +  A I  S +Q   + Y V   DG  +    ER+
Sbjct: 707  IFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGNNPERI 766

Query: 1299 RVIQCLEGAIE-------------RRVSEGVK--------------------LELCSNDK 1379
              I+  EG I+             RRV   +K                    LE+ + D+
Sbjct: 767  AEIR--EGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDR 824

Query: 1380 VGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
             GLL+ +  IF +  L+V  A+++T G    + FY+  +  +
Sbjct: 825  PGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQ 866



 Score = 35.8 bits (81), Expect = 0.65
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 17/152 (11%)
 Frame = +3

Query: 453  SANEYGILLEVIQVLMDLNLVISKA-YITSDGGWFMDVFNVTDKEGMKL-KDKAAIAQIE 626
            +A+++      +  +  LNL I  A  ITS   + +D + V D +G  +  +   IA+I 
Sbjct: 711  AADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDTYIVLDADGDSIGNNPERIAEIR 770

Query: 627  DYIRKSLGADSRYLPAQRRSV-----------DVAASADH----NVIELTGTDRPGXXXX 761
            + +  +L     Y    +R V            V  S D     +V+E+   DRPG    
Sbjct: 771  EGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLAR 830

Query: 762  XXXXXXXXKCNVVNAEIWTHNTRVAAVMRVTD 857
                      +V NA+I T   RV  V  +TD
Sbjct: 831  IGGIFLDFDLSVQNAKIATLGERVEDVFYITD 862

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>Q3SWE0:GLND_NITWN [Protein-PII] uridylyltransferase - Nitrobacter winogradskyi (strain|
            Nb-255 / ATCC 25391)
          Length = 925

 Score = 40.0 bits (92), Expect = 0.034
 Identities = 20/67 (29%), Positives = 37/67 (55%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N  S   T+++V   +  G+L ++   +  LNL I+ A++ + G    DVF VT
Sbjct: 835  PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894

Query: 576  DKEGMKL 596
            D  G ++
Sbjct: 895  DLLGARI 901



 Score = 38.9 bits (89), Expect = 0.077
 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 12/232 (5%)
 Frame = +3

Query: 657  SRYLPAQRRS-----VDVAASADHNVIELT--GTDRPGXXXXXXXXXXXXKCNVVNAEIW 815
            +R+L A  +S     ++V       V ELT    D P               N+V+A+I+
Sbjct: 712  ARFLRASEQSGRKLNINVGFDEARGVTELTILAADHPWLLSIIAGACASAGANIVDAQIY 771

Query: 816  THNTRVA----AVMRVTDEDTMLAVTDAERLQMIKERLSYLLRGNNLSRGAAMAEASGTS 983
            T     A    A+ R  + D      +  R   I E +  +L G         + A+G  
Sbjct: 772  TTTDGQALDTIAISREYERDE----DEGRRAARIAEIIEQVLEGRLRLPDVMPSRAAG-- 825

Query: 984  ATHTERRLHQMMLSDGDCEEFHRHVPAQPQRPNVTVRN-WNDKGYTVVTIRCKDRPKLLF 1160
                 +RL   ++                  P VT+ N W+D+ +T++ +   DRP LLF
Sbjct: 826  -----KRLRPFVVE-----------------PKVTINNQWSDR-HTMIEVSGLDRPGLLF 862

Query: 1161 DTVCTLTDLRYVVYHANIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
                 ++ L   +  A++     +A   FYV  + G+ +     +  + + L
Sbjct: 863  QLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAAIKRAL 914

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>P62223:GLND_RHOPA [Protein-PII] uridylyltransferase - Rhodopseudomonas palustris|
          Length = 929

 Score = 39.7 bits (91), Expect = 0.045
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++N+ S   T+++V   +  G+L ++   +  LNL I+ A++ + G    DVF VT
Sbjct: 835  PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 894

Query: 576  DKEGMKL 596
            D  G ++
Sbjct: 895  DLLGAQI 901



 Score = 39.3 bits (90), Expect = 0.059
 Identities = 48/219 (21%), Positives = 83/219 (37%), Gaps = 8/219 (3%)
 Frame = +3

Query: 684  SVDVAASADHNVIELT--GTDRPGXXXXXXXXXXXXKCNVVNAEIWTHNTRVA----AVM 845
            +++V       V ELT    D P               N+V+A+I+T     A    ++ 
Sbjct: 723  AINVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISIS 782

Query: 846  RVTDEDTMLAVTDAERLQMIKERLSYLLRGN-NLSRGAAMAEASGTSATHTERRLHQMML 1022
            R  D D      +  R   I E +  +L G   L    A   +SG+ A     +L   ++
Sbjct: 783  REYDRDE----DEGRRATRIGETIEEVLEGKLRLPEAVARRASSGSKA-----KLRAFVV 833

Query: 1023 SDGDCEEFHRHVPAQPQRPNVTVRN-WNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVV 1199
                              P V + N W+D+ YTV+ +   DRP LL+     ++ L   +
Sbjct: 834  E-----------------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNI 875

Query: 1200 YHANIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
              A++     +A   FYV  + G+ +     +  + + L
Sbjct: 876  ASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 914

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>Q667I7:GLND_YERPS [Protein-PII] uridylyltransferase - Yersinia pseudotuberculosis|
          Length = 893

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 43/205 (20%)
 Frame = +3

Query: 996  ERRLHQMMLSDGDCEEFHRHVPAQ------------PQRPNVTVRNWNDKGYTVVTIRCK 1139
            E  LH++  S    + F RH P Q              +P V V     +G T + I   
Sbjct: 659  EEALHRIW-SRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSP 717

Query: 1140 DRPKLLFDTVCTLTDLRYVVYHANIDASNN-QAYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
            DRP L    V  L      V+ A I  + +  A   F V   DGSP+  +   + +   L
Sbjct: 718  DRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPI-ISHAL 776

Query: 1317 EGAIER----------RVSEGVK--------------------LELCSNDKVGLLSEVTR 1406
            + AI R          R+S  ++                    LEL + D+ GLL+ V +
Sbjct: 777  QQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNERRTYLELIALDQPGLLARVGK 836

Query: 1407 IFRENSLTVTRAEVSTRGRTAVNTF 1481
            IF +  L++  A ++T G    + F
Sbjct: 837  IFADLGLSLHSARITTIGERVEDLF 861

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>Q8ZH68:GLND_YERPE [Protein-PII] uridylyltransferase - Yersinia pestis|
          Length = 893

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 43/205 (20%)
 Frame = +3

Query: 996  ERRLHQMMLSDGDCEEFHRHVPAQ------------PQRPNVTVRNWNDKGYTVVTIRCK 1139
            E  LH++  S    + F RH P Q              +P V V     +G T + I   
Sbjct: 659  EEALHRIW-SRCRADYFLRHSPNQLAWHARHLLEHDSTKPLVLVSRQATRGGTEIFIWSP 717

Query: 1140 DRPKLLFDTVCTLTDLRYVVYHANIDASNN-QAYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
            DRP L    V  L      V+ A I  + +  A   F V   DGSP+  +   + +   L
Sbjct: 718  DRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHPI-ISHAL 776

Query: 1317 EGAIER----------RVSEGVK--------------------LELCSNDKVGLLSEVTR 1406
            + AI R          R+S  ++                    LEL + D+ GLL+ V +
Sbjct: 777  QQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNERRTYLELIALDQPGLLARVGK 836

Query: 1407 IFRENSLTVTRAEVSTRGRTAVNTF 1481
            IF +  L++  A ++T G    + F
Sbjct: 837  IFADLGLSLHSARITTIGERVEDLF 861

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>Q5WVX6:GLND_LEGPL [Protein-PII] uridylyltransferase - Legionella pneumophila (strain|
            Lens)
          Length = 861

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
 Frame = +3

Query: 1038 EEFHRHVPA---QPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHA 1208
            E   RH  A     Q P V +   + +G T V I    + +    T   L++    +  A
Sbjct: 649  EVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEA 708

Query: 1209 NIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQ---C--------LEGAIERRVSEGV- 1352
             I   +NQ   + Y+   + +      +R R IQ   C        L     RR+S  + 
Sbjct: 709  AIITCDNQFDLDTYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALT 768

Query: 1353 -------------------KLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVN 1475
                               +L L +ND+ GLL+ ++R+F   ++ +  A+++T G    +
Sbjct: 769  HFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVED 828

Query: 1476 TFYVRSSAGEIV--DQKTI 1526
             FY+ +  G  +  ++KTI
Sbjct: 829  MFYISNQTGYSLNHEEKTI 847

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>Q5ZUS2:GLND_LEGPH [Protein-PII] uridylyltransferase - Legionella pneumophila subsp.|
            pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
            7513)
          Length = 861

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
 Frame = +3

Query: 1038 EEFHRHVPA---QPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHA 1208
            E   RH  A     Q P V +   + +G T V I    + +    T   L++    +  A
Sbjct: 649  EVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEA 708

Query: 1209 NIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQ---C--------LEGAIERRVSEGV- 1352
             I   +NQ   + Y+   + +      +R R IQ   C        L     RR+S  + 
Sbjct: 709  AIITCDNQFDLDTYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALT 768

Query: 1353 -------------------KLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVN 1475
                               +L L +ND+ GLL+ ++R+F   ++ +  A+++T G    +
Sbjct: 769  HFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVED 828

Query: 1476 TFYVRSSAGEIV--DQKTI 1526
             FY+ +  G  +  ++KTI
Sbjct: 829  MFYISNQTGYSLNHEEKTI 847

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>Q5X4J1:GLND_LEGPA [Protein-PII] uridylyltransferase - Legionella pneumophila (strain|
            Paris)
          Length = 861

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
 Frame = +3

Query: 1038 EEFHRHVPA---QPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHA 1208
            E   RH  A     Q P V +   + +G T V I    + +    T   L++    +  A
Sbjct: 649  EVIARHTKAILNSKQFPVVIIMPHHSQGGTEVFIYMPHKDERFTITTSVLSNHHVTIQEA 708

Query: 1209 NIDASNNQAYQEFYVRHVDGSPMNTEAERLRVIQ---C--------LEGAIERRVSEGV- 1352
             I   +NQ   + Y+   + +      +R R IQ   C        L     RR+S  + 
Sbjct: 709  AIITCDNQFDLDTYIILDENNQAFLNEQRARDIQKSLCDHLANTGRLPAVSRRRLSRALT 768

Query: 1353 -------------------KLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVN 1475
                               +L L +ND+ GLL+ ++R+F   ++ +  A+++T G    +
Sbjct: 769  HFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVED 828

Query: 1476 TFYVRSSAGEIV--DQKTI 1526
             FY+ +  G  +  ++KTI
Sbjct: 829  MFYISNQTGYSLNHEEKTI 847

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>Q6D8E5:GLND_ERWCT [Protein-PII] uridylyltransferase - Erwinia carotovora subsp.|
            atroseptica (Pectobacterium atrosepticum)
          Length = 904

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 42/209 (20%)
 Frame = +3

Query: 996  ERRLHQMMLSDGDCEEFHRHVPAQ------------PQRPNVTVRNWNDKGYTVVTIRCK 1139
            E  LH +  S    + F RH P Q              +P V + +   +G T + I   
Sbjct: 668  EEALHHIW-SRCRADYFLRHSPNQIAWHARHLLEHDTNKPLVLISHQASRGGTEIFIWSP 726

Query: 1140 DRPKLLFDTVCTLTDLRYVVYHANIDASNN-QAYQEFYVRHVDGSPMNTEAERLRVIQCL 1316
            DRP L       L      V+ A I  S +  A   F V   DGSP+  +   + +   L
Sbjct: 727  DRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQDRHEM-IRHAL 785

Query: 1317 EGAIE---------RRVSEGVK--------------------LELCSNDKVGLLSEVTRI 1409
            E A+          RR S  ++                    +EL + D+ GLL+ +  I
Sbjct: 786  EQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPGLLARIGEI 845

Query: 1410 FRENSLTVTRAEVSTRGRTAVNTFYVRSS 1496
            F + +L++  A +ST G    + F +  S
Sbjct: 846  FSDLNLSLHGARISTIGERVEDLFILADS 874

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>Q47F95:GLND_DECAR [Protein-PII] uridylyltransferase - Dechloromonas aromatica (strain|
            RCB)
          Length = 852

 Score = 37.4 bits (85), Expect = 0.22
 Identities = 26/103 (25%), Positives = 44/103 (42%)
 Frame = +3

Query: 996  ERRLHQMMLSDGDCEEFHRHVPAQPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCT 1175
            +R LHQM           R V   P +P V++R      + ++++   DRP LL+    T
Sbjct: 743  QRLLHQMPRDVPSSGRLSRQVKHFPIKPEVSIRGDEKGTHFILSLVAADRPGLLYTVANT 802

Query: 1176 LTDLRYVVYHANIDASNNQAYQEFYVRHVDGSPMNTEAERLRV 1304
            LT+    ++ A I     +A   F    + G  +     R+R+
Sbjct: 803  LTEHGAYLHTAKITTLGERAEDVFL---ISGGDLRDTHNRIRL 842

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>Q31G41:GLND_THICR [Protein-PII] uridylyltransferase - Thiomicrospira crunogena (strain|
            XCL-2)
          Length = 888

 Score = 36.6 bits (83), Expect = 0.38
 Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +3

Query: 1272 PMNTEAERLRVIQCLEGAIERRVSEGV-KLELCSNDKVGLLSEVTRIFRENSLTVTRAEV 1448
            P   E  R+RV +       + ++E + +L + + D  GLL+++ + F+   + V  A++
Sbjct: 789  PTQPEPRRIRVFEMPTHIQFQEINEELTELSISTKDIPGLLAKIGQAFKSCKIRVHDAKI 848

Query: 1449 STRGRTAVNTFYVRSSAGEIV 1511
            +T G  A +TF + S+  E +
Sbjct: 849  NTVGEKAEDTFMISSTTNESI 869

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>O44006:KPYK_EIMTE Pyruvate kinase - Eimeria tenella|
          Length = 531

 Score = 36.2 bits (82), Expect = 0.50
 Identities = 30/115 (26%), Positives = 52/115 (45%)
 Frame = -1

Query: 1250 IEFLVRLIIAGVNVCMVDHIAQVCQGANSIEQKLRPVLAPDGHHRVALVIPVPNSDIRPL 1071
            ++ +V+LI AG+NVC ++      +    + + L+  L      RVAL++     +IR  
Sbjct: 71   VDKMVQLIDAGMNVCRLNFSHGDHEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTG 130

Query: 1070 RLSWDVPMKLFAVPVAKHHLVQPSLGMCGRSP*CFCHGSSSREIVSSEKVGQSLL 906
             L  D P++L A  + K   +       G      C   S  ++ SS K G ++L
Sbjct: 131  MLEGDKPIELHAGDMLK---IVTDYSFVGNKS---CIACSYEKLPSSVKPGNTIL 179

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>Q18KL6:PDXT_HALWD Glutamine amidotransferase subunit pdxT - Haloquadratum walsbyi|
            (strain DSM 16790)
          Length = 205

 Score = 35.8 bits (81), Expect = 0.65
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -1

Query: 1631 SLRRGTMSGSLSSEVL-VPQAGLSPECCALWLPDGINGLLVDYLPRRTPDVECVDGRPSP 1455
            ++RR   S S+S E++ + Q+G+ P+C  L +P G +  +   L R   D E      + 
Sbjct: 19   AIRRAGESHSISVEIVEIRQSGVVPDCDVLLIPGGESTAISRLLDREGIDTEIQAHVEAG 78

Query: 1454 GAHLCSCDGQAVLPEDAGDLRQE 1386
               L +C G  +   DA D R E
Sbjct: 79   KPVLATCAGLIIAARDAKDDRVE 101

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>O69873:GLND_STRCO [Protein-PII] uridylyltransferase - Streptomyces coelicolor|
          Length = 835

 Score = 35.8 bits (81), Expect = 0.65
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +3

Query: 1065 QPQRPNVTVRNWNDKGYTVVTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQE 1244
            +P  P VTV     +  TV+ +R +D P LLF     L      V  A++      A   
Sbjct: 747  EPPPPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDA 806

Query: 1245 FYVRHVDGSPM 1277
            FYV   +G+P+
Sbjct: 807  FYVTRGEGTPL 817



 Score = 33.5 bits (75), Expect = 3.2
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 393 PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
           PP + V   +S  AT+++V + +  G+L  + + L    + +  A++++ G   +D F V
Sbjct: 750 PPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYV 809

Query: 573 TDKEGMKLK-DKAA 611
           T  EG  L  D+AA
Sbjct: 810 TRGEGTPLPGDEAA 823



 Score = 32.3 bits (72), Expect = 7.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAG 1502
            +E+ + D  GLL  + R      + V  A VST G  AV+ FYV    G
Sbjct: 766  IEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVDAFYVTRGEG 814

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>Q470D5:GLND_RALEJ [Protein-PII] uridylyltransferase - Ralstonia eutropha (strain|
            JMP134) (Alcaligenes eutrophus)
          Length = 869

 Score = 34.7 bits (78), Expect = 1.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSS 1496
            L L +ND+ GLL  +TR+  ++ ++V  A ++T G    + F V  S
Sbjct: 801  LSLSANDRTGLLYAITRVLAKHRVSVHTARINTLGERVEDVFLVDGS 847

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>Q60BB2:GLND_METCA [Protein-PII] uridylyltransferase - Methylococcus capsulatus|
          Length = 877

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYV 1487
            LEL + D+ GLLS+V + F    + +  A++ST G  A + F++
Sbjct: 806  LELIATDRPGLLSKVGQAFMRTGIRLHNAKISTVGSRAEDIFFI 849



 Score = 32.3 bits (72), Expect = 7.2
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
 Frame = +3

Query: 393  PPSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNV 572
            P  +   +D     +I+++ + +  G+L +V Q  M   + +  A I++ G    D+F +
Sbjct: 790  PTKVFFHDDPQNRFSILELIATDRPGLLSKVGQAFMRTGIRLHNAKISTVGSRAEDIFFI 849

Query: 573  TDKEGMKL---KDKAAIAQI 623
            TD+E   L    D+AA+ ++
Sbjct: 850  TDREDRPLDGEADRAALRRV 869

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>Q7VYD2:GLND_BORPE [Protein-PII] uridylyltransferase - Bordetella pertussis|
          Length = 865

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 1341 SEGVKLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
            S+  +L + + D+ GLL  + R+F E+ + +  A++ T G    + F V  SA E
Sbjct: 785  SQSWRLSVTATDRPGLLYALARVFAEHGVDLIMAKIMTLGERVEDVFIVSGSALE 839

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>Q7WA62:GLND_BORPA [Protein-PII] uridylyltransferase - Bordetella parapertussis|
          Length = 865

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 1341 SEGVKLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
            S+  +L + + D+ GLL  + R+F E+ + +  A++ T G    + F V  SA E
Sbjct: 785  SQSWRLSVTATDRPGLLYALARVFAEHGVDLIMAKIMTLGERVEDVFIVSGSALE 839

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>Q7WJ96:GLND_BORBR [Protein-PII] uridylyltransferase - Bordetella bronchiseptica|
            (Alcaligenes bronchisepticus)
          Length = 865

 Score = 34.3 bits (77), Expect = 1.9
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 1341 SEGVKLELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
            S+  +L + + D+ GLL  + R+F E+ + +  A++ T G    + F V  SA E
Sbjct: 785  SQSWRLSVTATDRPGLLYALARVFAEHGVDLIMAKIMTLGERVEDVFIVSGSALE 839

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>Q2Y5Q1:GLND_NITMU [Protein-PII] uridylyltransferase - Nitrosospira multiformis (strain|
            ATCC 25196 / NCIMB 11849)
          Length = 887

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 22/84 (26%), Positives = 41/84 (48%)
 Frame = +3

Query: 396  PSIIVDNDSSADATIVKVGSANEYGILLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVT 575
            P + ++ D S    ++ + + ++ G+L  + QVL+   L +  A I + G    D F VT
Sbjct: 782  PQVSIEPDDSGAYYVLSITAGDQSGLLSRIAQVLVRFGLNVHSARINTLGERAEDTFLVT 841

Query: 576  DKEGMKLKDKAAIAQIEDYIRKSL 647
               G  L +  ++ Q+E  + K L
Sbjct: 842  ---GSILSNSRSVIQLEANLIKVL 862



 Score = 32.0 bits (71), Expect = 9.4
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 1356 LELCSNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSS 1496
            L + + D+ GLLS + ++     L V  A ++T G  A +TF V  S
Sbjct: 797  LSITAGDQSGLLSRIAQVLVRFGLNVHSARINTLGERAEDTFLVTGS 843

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>Q9BKQ8:DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog - Caenorhabditis|
           elegans
          Length = 732

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
 Frame = +3

Query: 327 DEGYGPTWDSDDEYDNFIRKMNPPSI---IVDNDSSADATIVKVGSANE--------YGI 473
           D GY   +D   + D  ++ M    +   I+ +   +  +I+ +  A+E         G+
Sbjct: 154 DVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGL 213

Query: 474 LLEVIQVLMDLNLVISKAYITSDGGWFMDVFNVTDKEGMKLKDKAAIAQIE 626
           L ++IQ+  DL +++S A  T D   F D F + ++ G   KD A I  +E
Sbjct: 214 LRKIIQIRNDLRIIVSSA--TLDAELFKDFFEM-NETGNSDKDTAGIISVE 261

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>Q6FAM5:GLND_ACIAD [Protein-PII] uridylyltransferase - Acinetobacter sp. (strain ADP1)|
          Length = 888

 Score = 32.7 bits (73), Expect = 5.5
 Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
 Frame = +3

Query: 1122 VTIRCKDRPKLLFDTVCTLTDLRYVVYHANIDASNNQAYQEFYVRHVDGSPMNTEAERLR 1301
            + I  +D+P L   TV  L  +   V  A I  +      + YV       + T+ ER  
Sbjct: 701  IFIYTQDKPNLFATTVAVLDRMNLDVQDARIITATKAFSLDTYVVLDRFGTLLTDPEREH 760

Query: 1302 VIQ-----------CLEGAIERRVSEGVK--------------------LELCSNDKVGL 1388
             ++              G ++RR+   ++                    +E+ + D+ GL
Sbjct: 761  TVKEALIKALSQSDKYPGLMQRRIPRQLRHFDIENTVDITLNPVLQQNMVEISTLDQPGL 820

Query: 1389 LSEVTRIFRENSLTVTRAEVSTRGRTAVNTFYVRSSAGE 1505
            L+ V  +F    L +  A+++T G  A + F+V    G+
Sbjct: 821  LARVGGLFMMQGLDIHSAKIATLGERAEDIFFVTKKDGQ 859

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>A0JN53:RPAP1_BOVIN RNA polymerase II-associated protein 1 - Bos taurus (Bovine)|
          Length = 1395

 Score = 32.0 bits (71), Expect = 9.4
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = -2

Query: 535 VMYALLITRLRSMRTWITSS--RIPYSFALPTLTIVASADESLSTMMLGGFILRMKLS 368
           V+   L T    M +  TSS  R+P + A+  L ++ASA  +++  +L GF LR +LS
Sbjct: 593 VVREFLPTSWSPMGSGPTSSLHRVPCAPAMKLLRVLASASRNIAARLLSGFDLRSRLS 650


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 320,097,857
Number of extensions: 7019584
Number of successful extensions: 19400
Number of sequences better than 10.0: 49
Number of HSP's gapped: 19388
Number of HSP's successfully gapped: 114
Length of query: 640
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 520
Effective length of database: 67,771,039
Effective search space: 35240940280
Effective search space used: 35240940280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result