ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63c04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099215:Os03g0169100 | 427 | e-120 | 2 | AK066306:Os03g0169100 | 427 | e-120 | 3 | AK061772:Os03g0169100 | 427 | e-120 | 4 | AF047444:Os03g0169100 | 427 | e-120 | 5 | AK069451:Os09g0505700 | 162 | 7e-40 | 6 | AF189365:Os09g0505700 | 162 | 7e-40 | 7 | AK061034:Os09g0505700 | 127 | 2e-29 | 8 | AK120942:Os08g0496800 | 30 | 5.4 | 9 | AK068543:Os11g0659500 | 30 | 5.4 | 10 | AJ575667:Os08g0496800 | 30 | 5.4 | 11 | AK106244:Os07g0133500 | 30 | 5.4 | 12 | AB110179:Os07g0133500 | 30 | 5.4 | 13 | AK110330: | 29 | 7.0 | 14 | AK071936:Os09g0116900 | 29 | 9.2 |
|---|
>AK099215:Os03g0169100 | Length = 274 Score = 427 bits (1099), Expect = e-120 Identities = 214/237 (90%), Positives = 230/237 (97%), Gaps = 1/237 (0%) Frame = +1 Query: 337 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 513 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 514 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 693 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+ Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152 Query: 694 QIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL 873 QIKSLGAKAGVVLNP TPL+AI+YVL+ VDLVLIMSVNPGFGGQSFIESQVKKIA+LR+L Sbjct: 153 QIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRL 212 Query: 874 CEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 1044 C EKGVNPWIEVDGGV PKNAYKVIEAGANA+VAGSAVFGA DYAEAIKGIKTS++P Sbjct: 213 CAEKGVNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKP 269
>AK066306:Os03g0169100 | Length = 274 Score = 427 bits (1099), Expect = e-120 Identities = 214/237 (90%), Positives = 230/237 (97%), Gaps = 1/237 (0%) Frame = +1 Query: 337 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 513 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 514 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 693 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+ Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152 Query: 694 QIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL 873 QIKSLGAKAGVVLNP TPL+AI+YVL+ VDLVLIMSVNPGFGGQSFIESQVKKIA+LR+L Sbjct: 153 QIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRL 212 Query: 874 CEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 1044 C EKGVNPWIEVDGGV PKNAYKVIEAGANA+VAGSAVFGA DYAEAIKGIKTS++P Sbjct: 213 CAEKGVNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKP 269
>AK061772:Os03g0169100 | Length = 274 Score = 427 bits (1099), Expect = e-120 Identities = 214/237 (90%), Positives = 230/237 (97%), Gaps = 1/237 (0%) Frame = +1 Query: 337 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 513 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 514 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 693 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+ Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152 Query: 694 QIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL 873 QIKSLGAKAGVVLNP TPL+AI+YVL+ VDLVLIMSVNPGFGGQSFIESQVKKIA+LR+L Sbjct: 153 QIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRL 212 Query: 874 CEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 1044 C EKGVNPWIEVDGGV PKNAYKVIEAGANA+VAGSAVFGA DYAEAIKGIKTS++P Sbjct: 213 CAEKGVNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKP 269
>AF047444:Os03g0169100 | Length = 274 Score = 427 bits (1099), Expect = e-120 Identities = 214/237 (90%), Positives = 230/237 (97%), Gaps = 1/237 (0%) Frame = +1 Query: 337 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 513 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 514 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 693 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+ Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152 Query: 694 QIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL 873 QIKSLGAKAGVVLNP TPL+AI+YVL+ VDLVLIMSVNPGFGGQSFIESQVKKIA+LR+L Sbjct: 153 QIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRL 212 Query: 874 CEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 1044 C EKGVNPWIEVDGGV PKNAYKVIEAGANA+VAGSAVFGA DYAEAIKGIKTS++P Sbjct: 213 CAEKGVNPWIEVDGGVGPKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKP 269
>AK069451:Os09g0505700 | Length = 228 Score = 162 bits (409), Expect = 7e-40 Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 3/217 (1%) Frame = +1 Query: 394 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 573 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 574 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPLS 753 HLM+ P + KAGA + H E + + + IK+ G + GV L PGTP+ Sbjct: 69 CHLMVTNPSDYVEPLAKAGASGFTFHIE-VSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127 Query: 754 AIEYVLES---VDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVS 924 + ++E+ V+LVL+M+V PGFGGQ F+ ++K+ LRK K + IEVDGG+ Sbjct: 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK----KYPSLDIEVDGGLG 183 Query: 925 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 1035 P AGAN +VAGS++FGA + E I ++ S Sbjct: 184 PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKS 220
>AF189365:Os09g0505700 | Length = 228 Score = 162 bits (409), Expect = 7e-40 Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 3/217 (1%) Frame = +1 Query: 394 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 573 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 574 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPLS 753 HLM+ P + KAGA + H E + + + IK+ G + GV L PGTP+ Sbjct: 69 CHLMVTNPSDYVEPLAKAGASGFTFHIE-VSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127 Query: 754 AIEYVLES---VDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVS 924 + ++E+ V+LVL+M+V PGFGGQ F+ ++K+ LRK K + IEVDGG+ Sbjct: 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK----KYPSLDIEVDGGLG 183 Query: 925 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 1035 P AGAN +VAGS++FGA + E I ++ S Sbjct: 184 PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKS 220
>AK061034:Os09g0505700 | Length = 205 Score = 127 bits (318), Expect = 2e-29 Identities = 74/214 (34%), Positives = 111/214 (51%) Frame = +1 Query: 394 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 573 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 574 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPLS 753 HLM+ P + KAGA + H E + + + IK+ G + GV L PGTP+ Sbjct: 69 CHLMVTNPSDYVEPLAKAGASGFTFHIE-VSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127 Query: 754 AIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPKN 933 + + F+ ++K+ LRK K + IEVDGG+ P Sbjct: 128 EVFPL--------------------FMPEMMEKVRALRK----KYPSLDIEVDGGLGPST 163 Query: 934 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 1035 AGAN +VAGS++FGA + E I ++ S Sbjct: 164 IDVAASAGANCIVAGSSIFGAAEPGEVISALRKS 197
>AK120942:Os08g0496800 | Length = 412 Score = 29.6 bits (65), Expect = 5.4 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -2 Query: 1040 LLLVLIPLIASA*SL---APKTAEPATRAFAPASMTL*AFLGLTPPSTS 903 LLLV + A+ SL AP TAE RA P S AFL L P TS Sbjct: 6 LLLVAVAAAAAVLSLGDAAPSTAEVFWRAVLPESPLPDAFLRLLRPDTS 54
>AK068543:Os11g0659500 | Length = 425 Score = 29.6 bits (65), Expect = 5.4 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 12/68 (17%) Frame = -2 Query: 737 GFKTTPAFAPRLLIWSTVRCRWMVAVCSQWTLTISAPALI----KSGIR--------CSG 594 GF TP + R LIW + + +V W T+ + K+G+R SG Sbjct: 189 GFGATPEMSKRNLIWVVSKIQLLVEQYPAWGDTVQVDTWVAAAGKNGMRRDWHVRDYNSG 248 Query: 593 STIIRCTS 570 TI+R TS Sbjct: 249 RTILRATS 256
>AJ575667:Os08g0496800 | Length = 412 Score = 29.6 bits (65), Expect = 5.4 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -2 Query: 1040 LLLVLIPLIASA*SL---APKTAEPATRAFAPASMTL*AFLGLTPPSTS 903 LLLV + A+ SL AP TAE RA P S AFL L P TS Sbjct: 6 LLLVAVAAAAAVLSLGDAAPSTAEVFWRAVLPESPLPDAFLRLLRPDTS 54
>AK106244:Os07g0133500 | Length = 462 Score = 29.6 bits (65), Expect = 5.4 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 31 VRLRLAP---GDSPLLLPPTPPGRARVAPTHQIGP-ALPFH 141 +RL P D+PLLLPP+P A AP G A FH Sbjct: 42 IRLNKLPYQTADAPLLLPPSPEASAAPAPAPATGALAAAFH 82
>AB110179:Os07g0133500 | Length = 462 Score = 29.6 bits (65), Expect = 5.4 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 31 VRLRLAP---GDSPLLLPPTPPGRARVAPTHQIGP-ALPFH 141 +RL P D+PLLLPP+P A AP G A FH Sbjct: 42 IRLNKLPYQTADAPLLLPPSPEASAAPAPAPATGALAAAFH 82
>AK110330: | Length = 819 Score = 29.3 bits (64), Expect = 7.0 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +1 Query: 43 LAPGDSPLLLPPTPPGRARVAPTHQIG--PALPFHSIRQGL 159 L P ++P P PP R++ PT P +P S+ + L Sbjct: 578 LTPSETPAQQRPLPPARSQTQPTQSTSSLPTVPLESLNRAL 618
>AK071936:Os09g0116900 | Length = 95 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +1 Query: 49 PGDSPLLLPPTPPGRARVAPTHQIGPALP 135 P S LLLPP GR R AP PA+P Sbjct: 8 PAASSLLLPPPCLGRPRWAPGQSPPPAMP 36 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,243,668 Number of extensions: 831601 Number of successful extensions: 3198 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3177 Number of HSP's successfully gapped: 14 Length of query: 466 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 362 Effective length of database: 11,235,591 Effective search space: 4067283942 Effective search space used: 4067283942 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
