| Clone Name | FLbaf63b02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT833139.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005K04, full insert sequence Length = 574 Score = 402 bits (203), Expect = e-109 Identities = 266/287 (92%) Strand = Plus / Plus Query: 70 cccgccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtaca 129 |||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 63 cccgtcgacgagatgacgaagcgcaccaagaaggctggaattgttggcaaatatggtact 122 Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 | |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 123 aggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 182 Query: 190 tacttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttgggga 249 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 183 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 242 Query: 250 tgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcg 309 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 243 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 302 Query: 310 gtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 303 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 349
>ref|NM_001050403.1| Oryza sativa (japonica cultivar-group) Os01g0679700 (Os01g0679700) mRNA, complete cds Length = 564 Score = 402 bits (203), Expect = e-109 Identities = 266/287 (92%) Strand = Plus / Plus Query: 70 cccgccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtaca 129 |||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 66 cccgtcgacgagatgacgaagcgcaccaagaaggctggaattgttggcaaatatggtact 125 Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 | |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 126 aggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 185 Query: 190 tacttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttgggga 249 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 186 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 245 Query: 250 tgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcg 309 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 246 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 305 Query: 310 gtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 306 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 352
>dbj|AK119801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A08, full insert sequence Length = 537 Score = 402 bits (203), Expect = e-109 Identities = 266/287 (92%) Strand = Plus / Plus Query: 70 cccgccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtaca 129 |||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 66 cccgtcgacgagatgacgaagcgcaccaagaaggctggaattgttggcaaatatggtact 125 Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 | |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 126 aggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 185 Query: 190 tacttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttgggga 249 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 186 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 245 Query: 250 tgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcg 309 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 246 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 305 Query: 310 gtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 306 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 352
>dbj|AK119702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D09, full insert sequence Length = 564 Score = 402 bits (203), Expect = e-109 Identities = 266/287 (92%) Strand = Plus / Plus Query: 70 cccgccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtaca 129 |||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 66 cccgtcgacgagatgacgaagcgcaccaagaaggctggaattgttggcaaatatggtact 125 Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 | |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 126 gggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaag 185 Query: 190 tacttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttgggga 249 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 186 tacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctgggga 245 Query: 250 tgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcg 309 |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 246 tgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcg 305 Query: 310 gtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 306 gtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 352
>gb|AY109323.1| Zea mays CL4004_3 mRNA sequence Length = 1730 Score = 367 bits (185), Expect = 3e-98 Identities = 257/281 (91%) Strand = Plus / Plus Query: 78 cgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatgg 137 ||||||||||||||| |||||||| || |||||||| ||||||||||| || | ||||| Sbjct: 1254 cgagatgacgaagcgaaccaagaaggccggaattgttggcaaatatggaaccaggtatgg 1313 Query: 138 tgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctg 197 ||| || |||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1314 tgctagcttgcgtaagcaaatcaagaagatggaggtatctcagcactccaagtatttctg 1373 Query: 198 tgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaagga 257 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1374 tgagttctgtgggaagtttgctgtgaagaggaaagcggttgggatttggggatgcaagga 1433 Query: 258 ctgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgt 317 |||||||||||| ||||| || ||||||||||||||||||||||| || ||||||||||| Sbjct: 1434 ctgtgggaaggtcaaggccggtggtgcttacaccatgaacactgctagtgcggtcactgt 1493 Query: 318 caggagcactatccgtcgcttgagggaacagactgaagcat 358 ||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1494 caggagcacgatccgtcgcttgagggagcagactgaagcat 1534
>gb|AY103695.1| Zea mays PCO065803 mRNA sequence Length = 774 Score = 359 bits (181), Expect = 7e-96 Identities = 253/277 (91%) Strand = Plus / Plus Query: 82 atgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||||||||| |||||||| ||||||||||| ||||||||||| || | ||||| || Sbjct: 105 atgacgaagcgcaccaagaaggctggaattgttggcaaatatggaaccaggtatggcgct 164 Query: 142 agtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgag 201 || |||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 165 agcttgcgtaagcaaatcaagaagatggaggtatctcagcactccaagtacttctgcgag 224 Query: 202 ttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgt 261 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 ttttgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgt 284 Query: 262 gggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcagg 321 |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 285 gggaaggtcaaggctggcggtgcttacaccatgaacactgctagtgcagtcactgtcagg 344 Query: 322 agcactatccgtcgcttgagggaacagactgaagcat 358 ||||| || ||||||||||| || ||||||||||||| Sbjct: 345 agcacgattcgtcgcttgagagagcagactgaagcat 381
>emb|CT829235.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN023D06, full insert sequence Length = 546 Score = 345 bits (174), Expect = 1e-91 Identities = 255/282 (90%) Strand = Plus / Plus Query: 75 cgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtta 134 |||| ||||||||||||| |||||||| || ||||| || |||||||||||||| | || Sbjct: 78 cgactagatgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggta 137 Query: 135 tggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtactt 194 |||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 138 tggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtactt 197 Query: 195 ctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaa 254 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 198 ctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctggggatgcaa 257 Query: 255 ggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcac 314 ||||||||| ||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 258 ggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagtgcggtcac 317 Query: 315 tgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||| ||||| ||||||||| ||||||| ||||| ||||| Sbjct: 318 ggtcagaagcacaatccgtcgcctgagggagcagacagaagc 359
>ref|NM_001062820.1| Oryza sativa (japonica cultivar-group) Os05g0557000 (Os05g0557000) mRNA, complete cds Length = 547 Score = 345 bits (174), Expect = 1e-91 Identities = 255/282 (90%) Strand = Plus / Plus Query: 75 cgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtta 134 |||| ||||||||||||| |||||||| || ||||| || |||||||||||||| | || Sbjct: 75 cgactagatgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggta 134 Query: 135 tggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtactt 194 |||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 135 tggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtactt 194 Query: 195 ctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaa 254 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 195 ctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctggggatgcaa 254 Query: 255 ggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcac 314 ||||||||| ||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 255 ggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagtgcggtcac 314 Query: 315 tgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||| ||||| ||||||||| ||||||| ||||| ||||| Sbjct: 315 ggtcagaagcacaatccgtcgcctgagggagcagacagaagc 356
>dbj|AK059395.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A05, full insert sequence Length = 547 Score = 345 bits (174), Expect = 1e-91 Identities = 255/282 (90%) Strand = Plus / Plus Query: 75 cgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtta 134 |||| ||||||||||||| |||||||| || ||||| || |||||||||||||| | || Sbjct: 75 cgactagatgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggta 134 Query: 135 tggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtactt 194 |||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 135 tggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtactt 194 Query: 195 ctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaa 254 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 195 ctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctggggatgcaa 254 Query: 255 ggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcac 314 ||||||||| ||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 255 ggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagtgcggtcac 314 Query: 315 tgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||| ||||| ||||||||| ||||||| ||||| ||||| Sbjct: 315 ggtcagaagcacaatccgtcgcctgagggagcagacagaagc 356
>gb|DQ245615.1| Zea mays clone 18315 mRNA sequence Length = 665 Score = 343 bits (173), Expect = 4e-91 Identities = 257/285 (90%) Strand = Plus / Plus Query: 72 cgccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacg 131 |||||| |||||||||||||| |||||||| |||||||| || |||||||||||||| | Sbjct: 85 cgccgaagagatgacgaagcgcaccaagaaggctggaatcgttggcaaatatggtaccag 144 Query: 132 ttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagta 191 || |||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 145 gtacggtgccagtctgcgtaagcagatcaagaagatggaggtctcccagcactccaagta 204 Query: 192 cttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatg 251 ||||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 205 cttctgtgagttctgcggcaagtttgccgtgaagaggaaagcagtcggaatctggggatg 264 Query: 252 caaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggt 311 ||||||||| |||||||| ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 265 caaggactgcgggaaggttaaggccggtggtgcctataccatgaacactgcaagtgcggt 324 Query: 312 cactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 ||||||||||||||| ||||||||| ||||||| ||||||||||| Sbjct: 325 cactgtcaggagcacgatccgtcgcctgagggagcagactgaagc 369
>gb|AY111949.1| Zea mays CL4004_2 mRNA sequence Length = 536 Score = 280 bits (141), Expect = 5e-72 Identities = 249/285 (87%) Strand = Plus / Plus Query: 74 ccgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtt 133 |||||||||||||||| || |||||||| || ||||| || |||||||||||||| | | Sbjct: 66 ccgacgagatgacgaaacgcaccaagaaggcaggaatcgttggcaaatatggtaccaggt 125 Query: 134 atggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtact 193 ||||||||||| | ||||| |||||||||||||||||||| || |||||||| || |||| Sbjct: 126 atggtgccagtttacgtaaacagatcaagaagatggaggtctcgcagcactccaaatact 185 Query: 194 tctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgca 253 |||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||| Sbjct: 186 tctgtgagttctgtggcaagtttgccgtgaagaggaaagcagttggtatctggggatgca 245 Query: 254 aggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtca 313 |||||||||||||||| ||||| || || || ||||| ||||||||||| || ||||||| Sbjct: 246 aggactgtgggaaggttaaggccggtggcgcctacacaatgaacactgctagtgcggtca 305 Query: 314 ctgtcaggagcactatccgtcgcttgagggaacagactgaagcat 358 |||| || ||||| ||||| ||| || |||| ||||| ||||||| Sbjct: 306 ctgtgagaagcacaatccggcgcctgcgggagcagaccgaagcat 350
>dbj|D29723.1|RICYK36 Oryza sativa mRNA, partial homologous to ribosomal protein L37a gene Length = 283 Score = 268 bits (135), Expect = 2e-68 Identities = 205/227 (90%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 75 cgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtta 134 |||| ||||||||||||| |||||||| || ||||| || |||||||||||||| | || Sbjct: 58 cgactagatgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggta 117 Query: 135 tggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtactt 194 |||||||||| |||||||| ||||||||||||||||||| || |||||||| |||||||| Sbjct: 118 tggtgccagtttgcgtaag-agatcaagaagatggaggtttcccagcactccaagtactt 176 Query: 195 ctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaa 254 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 177 ctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctggggatgcaa 236 Query: 255 ggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactg 301 ||||||||| ||||| |||||||| ||||| |||| ||||||||||| Sbjct: 237 ggactgtggcaaggtcaaggctggtggtgcctacaacatgaacactg 283
>gb|DQ083180.1| Oryza sativa (indica cultivar-group) clone 2S8C47 mRNA sequence Length = 308 Score = 242 bits (122), Expect = 1e-60 Identities = 155/166 (93%) Strand = Plus / Plus Query: 191 acttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggat 250 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1 acttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggat 60 Query: 251 gcaaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcgg 310 ||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||| Sbjct: 61 gcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcgg 120 Query: 311 tcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 |||| ||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 121 tcaccgtcaggagcacaatccgtcgtctgagggagcagactgaagc 166
>dbj|AK059643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B10, full insert sequence Length = 370 Score = 234 bits (118), Expect = 3e-58 Identities = 148/158 (93%) Strand = Plus / Plus Query: 199 gagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggac 258 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 gagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggatgcaaggac 60 Query: 259 tgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtc 318 ||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||| Sbjct: 61 tgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcggtcactgtc 120 Query: 319 aggagcactatccgtcgcttgagggaacagactgaagc 356 |||||||| |||||||| ||||||| ||||||||||| Sbjct: 121 aggagcacaatccgtcgtctgagggagcagactgaagc 158
>emb|CT985011.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 978 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| || ||||| | ||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 486 aagcgcacgaagaaggttggcattgtcggcaagtatggtacccgatatggtgccagtctg 545 Query: 148 cgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgt 207 ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||||||| Sbjct: 546 cgtaagcagattaagaaaatggaggttacacagcacagcaagtatttctgcgagttctgt 605 Query: 208 gggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaag 267 || |||| |||||||||||||| | ||||| |||||||||||||||||||| || || Sbjct: 606 ggcaagtacgctgtgaagaggaagtctgttggtatttggggatgcaaggactgcggcaaa 665 Query: 268 gtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcact 327 | |||||||| ||||| |||||| ||||||| || || || || || || |||||||| Sbjct: 666 atcaaggctggtggtgcctacaccttgaacaccgcaagtgccgtgacggttaggagcacc 725 Query: 328 atccg 332 ||||| Sbjct: 726 atccg 730
>emb|CT984526.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 492 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| || ||||| | ||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 47 aagcgcacgaagaaggttggcattgtcggcaagtatggtacccgatatggtgccagtctg 106 Query: 148 cgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgt 207 ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||||||| Sbjct: 107 cgtaagcagattaagaaaatggaggttacccagcacagcaagtatttctgcgagttctgt 166 Query: 208 gggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaag 267 || |||| |||||||||||||| | ||||| |||||||||||||||||||| || || Sbjct: 167 ggcaagtacgctgtgaagaggaagtctgttggtatttggggatgcaaggactgcggcaaa 226 Query: 268 gtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcact 327 | |||||||| ||||| |||||| ||||||| || || || || || || |||||||| Sbjct: 227 atcaaggctggtggtgcctacaccttgaacaccgcaagtgccgtgacggttaggagcacc 286 Query: 328 atccg 332 ||||| Sbjct: 287 atccg 291
>emb|CT984229.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 886 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| || ||||| | ||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 486 aagcgcacgaagaaggttggcattgtcggcaagtatggtacccgatatggtgccagtctg 545 Query: 148 cgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgt 207 ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||||||| Sbjct: 546 cgtaagcagattaagaaaatggaggttacacagcacagcaagtatttctgcgagttctgt 605 Query: 208 gggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaag 267 || |||| |||||||||||||| | ||||| |||||||||||||||||||| || || Sbjct: 606 ggcaagtacgctgtgaagaggaagtctgttggtatttggggatgcaaggactgcggcaaa 665 Query: 268 gtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcact 327 | |||||||| ||||| |||||| ||||||| || || || || || || |||||||| Sbjct: 666 atcaaggctggtggtgcctacaccttgaacaccgcaagtgccgtgacggttaggagcacc 725 Query: 328 atccg 332 ||||| Sbjct: 726 atccg 730
>emb|CT982962.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 921 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| || ||||| | ||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 486 aagcgcacgaagaaggttggcattgtcggcaagtatggtacccgatatggtgccagtctg 545 Query: 148 cgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgt 207 ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||||||| Sbjct: 546 cgtaagcagattaagaaaatggaggttacacagcacagcaagtatttctgcgagttctgt 605 Query: 208 gggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaag 267 || |||| |||||||||||||| | ||||| |||||||||||||||||||| || || Sbjct: 606 ggcaagtacgctgtgaagaggaagtctgttggtatttggggatgcaaggactgcggcaaa 665 Query: 268 gtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcact 327 | |||||||| ||||| |||||| ||||||| || || || || || || |||||||| Sbjct: 666 atcaaggctggtggtgcctacaccttgaacaccgcaagtgccgtgacggttaggagcacc 725 Query: 328 atccg 332 ||||| Sbjct: 726 atccg 730
>emb|CT982052.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 492 Score = 161 bits (81), Expect = 3e-36 Identities = 204/245 (83%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| || ||||| | ||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 47 aagcgcacgaagaaggttggcattgtcggcaagtatggtacccgatatggtgccagtctg 106 Query: 148 cgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgt 207 ||||||||||| ||||| |||||||| | |||||| ||||| ||||| ||||||||| Sbjct: 107 cgtaagcagattaagaaaatggaggttacccagcacagcaagtatttctgcgagttctgt 166 Query: 208 gggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaag 267 || |||| |||||||||||||| | ||||| |||||||||||||||||||| || || Sbjct: 167 ggcaagtacgctgtgaagaggaagtctgttggtatttggggatgcaaggactgcggcaaa 226 Query: 268 gtgaaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcact 327 | |||||||| ||||| |||||| ||||||| || || || || || || |||||||| Sbjct: 227 atcaaggctggtggtgcctacaccttgaacaccgcaagtgccgtgacggttaggagcacc 286 Query: 328 atccg 332 ||||| Sbjct: 287 atccg 291
>ref|NM_111932.1| Arabidopsis thaliana structural constituent of ribosome (AT3G10950) mRNA, complete cds Length = 279 Score = 141 bits (71), Expect = 3e-30 Identities = 170/203 (83%) Strand = Plus / Plus Query: 97 aagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcag 156 ||||| ||| |||||||||| |||||||||||||| |||||||||||||| | |||||| Sbjct: 16 aagaaggctagaattgtcggaaaatatggtacacgatatggtgccagtcttaggaagcag 75 Query: 157 atcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagttt 216 |||||||||||||| ||| ||| ||| |||||||||||||||||||| || |||| Sbjct: 76 atcaagaagatggaagtgagtcaacacaacaagtacttctgtgagttctgcggaaagtac 135 Query: 217 gctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggct 276 | || |||||||||| ||||| |||||||| ||||| || || ||||| ||||| || Sbjct: 136 tccgttaagaggaaagttgttggcatttgggggtgcaaagattgcgggaaagtgaaagca 195 Query: 277 ggcggtgcttacaccatgaacac 299 |||||||| ||||| |||||||| Sbjct: 196 ggcggtgcatacacaatgaacac 218
>emb|AJ131732.1|PME131732 Pseudotsuga menziesii mRNA for ribosomal protein L37A Length = 607 Score = 141 bits (71), Expect = 3e-30 Identities = 170/203 (83%) Strand = Plus / Plus Query: 82 atgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| |||||||| ||||| ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 167 atgacaaagcgtactaagaaggctggtattgttggcaaatatggtaccaggtatggtgcc 226 Query: 142 agtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgag 201 ||| | | || ||||| || || ||||| ||| |||||| || |||| || ||||| Sbjct: 227 agtttaagaaaacagattaaaaaaatggaagtgagtcagcattccaagtttttttgtgaa 286 Query: 202 ttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgt 261 |||||||| |||||||| ||||| || ||||||||||| ||||||||||||||||| ||| Sbjct: 287 ttctgtggcaagtttgcagtgaaaagaaaagcagttgggatttggggatgcaaggattgt 346 Query: 262 gggaaggtgaaggctggcggtgc 284 |||||||||||||| || ||||| Sbjct: 347 gggaaggtgaaggcaggtggtgc 369
>ref|NM_115888.2| Arabidopsis thaliana structural constituent of ribosome (AT3G60245) mRNA, complete cds Length = 592 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 81 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 140 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 141 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 200 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 201 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 260 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 261 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 302
>gb|AY491666.1| Capsicum annuum unknown mRNA Length = 504 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 81 gatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgc 140 |||||| ||| | |||||||| |||||||| || || || |||||||| ||||||||||| Sbjct: 26 gatgactaagaggaccaagaaggctggaatcgttgggaagtatggtacccgttatggtgc 85 Query: 141 cagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtga 200 |||||||||||||||||| || || |||||||| ||||| ||||||||||| || Sbjct: 86 cagtctgcgtaagcagattaaaaaaatggaggtcagccagcatagcaagtacttctgcga 145 Query: 201 gttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactg 260 ||| ||||| |||| ||| || ||||||||||| || ||||||||||| ||||| || || Sbjct: 146 gttttgtggaaagtatgcagtaaagaggaaagctgtaggaatttggggttgcaaagattg 205 Query: 261 tgggaaggtgaaggctggcggtgcttacaccatgaacactgc 302 ||| ||||| || || || ||||||||||| |||||||||| Sbjct: 206 tggcaaggtcaaagccggtggtgcttacacattgaacactgc 247
>gb|AY117196.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 310 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 24 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 83 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 84 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 143 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 144 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 203 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 204 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 245
>gb|AY080669.1| Arabidopsis thaliana unknown protein (At3g60245) mRNA, complete cds Length = 462 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 73 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 132 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 133 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 192 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 193 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 252 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 253 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 294
>gb|AY088178.1| Arabidopsis thaliana clone 42545 mRNA, complete sequence Length = 466 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 81 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 140 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 141 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 200 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 201 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 260 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 261 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 302
>emb|BX825839.1|CNS0A7IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 69 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 128 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 129 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 188 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 189 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 248 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 249 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 290
>emb|BX825643.1|CNS0A7I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 472 Score = 139 bits (70), Expect = 1e-29 Identities = 184/222 (82%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 64 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 123 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| Sbjct: 124 gatggaggtcagccagcacagcaagtacttctgtgagttctgtggcaagtacggagtgaa 183 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 184 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 243 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 244 ttacacaatgaacaccgccagtgcggtcactgttagaagcac 285
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 212 agtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtga 271 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27959426 agtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtga 27959367 Query: 272 aggctggcggtgcttacaccatgaa 296 |||| || ||||||||||||||||| Sbjct: 27959366 aggccggtggtgcttacaccatgaa 27959342 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 133 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtac 192 |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 27960300 tatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaagtac 27960241 Query: 193 ttctgtgagttctgtgggaag 213 ||||||||||||||||||||| Sbjct: 27960240 ttctgtgagttctgtgggaag 27960220 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 297 cactgccagcgcggtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 |||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 27959251 cactgctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 27959192 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 84 gacgaagcgtaccaagaaagctggaattgtcggcaaatatggta 127 ||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 27960428 gacgaagcgcaccaagaaggctggaattgttggcaaatatggta 27960385
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Minus Query: 212 agtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtga 271 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 146107 agtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtga 146048 Query: 272 aggctggcggtgcttacaccatgaa 296 |||| || ||||||||||||||||| Sbjct: 146047 aggccggtggtgcttacaccatgaa 146023 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 133 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtac 192 |||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 146981 tatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaagtac 146922 Query: 193 ttctgtgagttctgtgggaag 213 ||||||||||||||||||||| Sbjct: 146921 ttctgtgagttctgtgggaag 146901 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 297 cactgccagcgcggtcactgtcaggagcactatccgtcgcttgagggaacagactgaagc 356 |||||| || |||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 145932 cactgctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagc 145873 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 84 gacgaagcgtaccaagaaagctggaattgtcggcaaatatggta 127 ||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 147109 gacgaagcgcaccaagaaggctggaattgttggcaaatatggta 147066
>gb|AF127042.1|AF127042 Gossypium hirsutum 60S ribosomal protein L37a (RL37a) mRNA, complete cds Length = 619 Score = 137 bits (69), Expect = 4e-29 Identities = 192/233 (82%) Strand = Plus / Plus Query: 97 aagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcag 156 ||||| || |||||||| || ||||||||||| ||||||||||||||| || | ||||| Sbjct: 50 aagaaggccggaattgttggaaaatatggtacccgttatggtgccagtttgaggaagcaa 109 Query: 157 atcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagttt 216 || ||||||||||||||| ||| ||| ||||||||||| ||||||||||| |||| | Sbjct: 110 attaagaagatggaggtgagtcaacacagcaagtacttctgcgagttctgtggaaagtat 169 Query: 217 gctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggct 276 || |||||||| || || || ||||| ||||| ||||||| || ||||| || || ||| Sbjct: 170 gcagtgaagagaaaggctgtaggaatctggggctgcaaggcttgcgggaaagttaaagct 229 Query: 277 ggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcactat 329 || |||||||| || |||||||||||||||| || || || ||||| ||||| Sbjct: 230 ggtggtgcttatactttgaacactgccagcgctgtgacggtgaggagtactat 282
>emb|AJ879068.1| Capsicum chinense mRNA for 60S ribosomal protein L37a Length = 536 Score = 131 bits (66), Expect = 3e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 81 gatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgc 140 |||||| ||| | |||||||| |||||||| || || || |||||||| ||||||||||| Sbjct: 54 gatgactaagaggaccaagaaggctggaatcgttgggaagtatggtacccgttatggtgc 113 Query: 141 cagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtga 200 |||||||||||||||||| || || |||||||| ||||| |||||||||| || Sbjct: 114 cagtctgcgtaagcagattaaaaaaatggaggtcagccagcatagcgagtacttctgcga 173 Query: 201 gttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactg 260 ||| ||||| |||| ||| || ||||||||||| || ||||||||||| ||||| || || Sbjct: 174 gttttgtggaaagtatgcagtaaagaggaaagctgtaggaatttggggttgcaaagattg 233 Query: 261 tgggaaggtgaaggctggcggtgcttacaccatgaacactgc 302 ||| ||||| || || || ||||||||||| |||||||||| Sbjct: 234 tggcaaggtcaaagccggtggtgcttacacattgaacactgc 275
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 212 agtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtga 271 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 77193 agtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtca 77252 Query: 272 aggctggcggtgcttacaccatgaa 296 ||||||| ||||| ||||||||||| Sbjct: 77253 aggctggtggtgcctacaccatgaa 77277 Score = 113 bits (57), Expect = 6e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 133 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtac 192 |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 76615 tatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtac 76674 Query: 193 ttctgtgagttctgtgg 209 ||||| ||||||||||| Sbjct: 76675 ttctgcgagttctgtgg 76691 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 84 gacgaagcgtaccaagaaagctggaattgtcggcaaatatggta 127 ||||||||| |||||||| || ||||| || ||||||||||||| Sbjct: 76468 gacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 76511
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 212 agtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtga 271 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 27481063 agtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtca 27481122 Query: 272 aggctggcggtgcttacaccatgaa 296 ||||||| ||||| ||||||||||| Sbjct: 27481123 aggctggtggtgcctacaccatgaa 27481147 Score = 113 bits (57), Expect = 6e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 133 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtac 192 |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 27480485 tatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtac 27480544 Query: 193 ttctgtgagttctgtgg 209 ||||| ||||||||||| Sbjct: 27480545 ttctgcgagttctgtgg 27480561 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 84 gacgaagcgtaccaagaaagctggaattgtcggcaaatatggta 127 ||||||||| |||||||| || ||||| || ||||||||||||| Sbjct: 27480338 gacgaagcgcaccaagaaggcaggaatcgttggcaaatatggta 27480381
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete sequence Length = 91863 Score = 125 bits (63), Expect = 2e-25 Identities = 159/191 (83%) Strand = Plus / Plus Query: 133 tatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaagtac 192 |||||||||||||| | ||||| |||||||||||||| ||| ||||||| || ||| Sbjct: 39462 tatggtgccagtcttaggaagcaaatcaagaagatggaagtgagtcagcacagcaaatac 39521 Query: 193 ttctgtgagttctgtgggaagtttgctgtgaagaggaaagcagttggaatttggggatgc 252 ||||| |||||||||| |||| |||||| || |||| || ||||||||||||||||| Sbjct: 39522 ttctgctagttctgtggcaagtatgctgttaaacggaaggctgttggaatttggggatgt 39581 Query: 253 aaggactgtgggaaggtgaaggctggcggtgcttacaccatgaacactgccagcgcggtc 312 |||||||||||||| || |||||||| ||||| ||||| ||||| ||||| || || || Sbjct: 39582 aaggactgtgggaaagttaaggctggaggtgcctacacgatgaatactgctagtgctgta 39641 Query: 313 actgtcaggag 323 ||||| ||||| Sbjct: 39642 actgttaggag 39652
>emb|BX822513.1|CNS0A7MD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 437 Score = 123 bits (62), Expect = 7e-25 Identities = 182/222 (81%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || |||||||||||||| ||| | | |||||||| ||||| Sbjct: 64 tggaatcgtcggcaaatacggaacacgttatggtgcgagtatcaggaagcagattaagaa 123 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| ||| ||||||||||||||||||| |||| | ||||| Sbjct: 124 gatggaggtcagccagcacagcaagaacttctgtgagttctgtggcaagtacggagtgaa 183 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || || || || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 184 gcgaaaggctgtaggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgc 243 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 244 ttacacaatgaacaccgccagtgcggtcactgtaagaagcac 285
>emb|Z24739.1|BRRBPL37A B.rapa ribosomal protein L37a mRNA, complete CDS Length = 461 Score = 123 bits (62), Expect = 7e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 151 aagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtggg 210 |||||||| |||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 103 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgcggc 162 Query: 211 aagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtg 270 |||| | |||||||| || |||||||| || |||||||||||||| ||||| ||||| Sbjct: 163 aagtacggagtgaagagaaaggcagttggtatctggggatgcaaggattgtggcaaggtc 222 Query: 271 aaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcag 320 |||||||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 223 aaggctggtggtgcatacaccatgaacaccgccagtgccgtcaccgtcag 272
>gb|L21897.1|BRRRPL37A Brassica rapa ribosomal protein L37A (RPL37A) mRNA, complete cds Length = 446 Score = 123 bits (62), Expect = 7e-25 Identities = 143/170 (84%) Strand = Plus / Plus Query: 151 aagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtggg 210 |||||||| |||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 103 aagcagattaagaagatggaggtcagccagcacagcaagtacttctgtgagttctgcggc 162 Query: 211 aagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtg 270 |||| | |||||||| || |||||||| || |||||||||||||| ||||| ||||| Sbjct: 163 aagtacggagtgaagagaaaggcagttggtatctggggatgcaaggattgtggcaaggtc 222 Query: 271 aaggctggcggtgcttacaccatgaacactgccagcgcggtcactgtcag 320 |||||||| ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 223 aaggctggtggtgcatacaccatgaacaccgccagtgccgtcaccgtcag 272
>gb|AC189297.1| Brassica rapa subsp. pekinensis clone KBrB027O09, complete sequence Length = 149009 Score = 113 bits (57), Expect = 6e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 151 aagcagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtggg 210 |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| Sbjct: 129838 aagcagatcaagaagatggaagtgagccagcacagcaagtacttctgtgagttctgtggc 129897 Query: 211 aagtttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtg 270 |||| | || ||| | || || |||||||| ||||||||||||||||| || ||||| Sbjct: 129898 aagtacggagtcaagcgaaaggctgttggaatctggggatgcaaggactgcggcaaggtc 129957 Query: 271 aaggctggcggtgcttacaccatgaacac 299 ||||| || |||||||||||||||||||| Sbjct: 129958 aaggccggtggtgcttacaccatgaacac 129986
>gb|AY310764.1| Nicotiana benthamiana clone 6-280 unknown mRNA Length = 402 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Plus Query: 94 accaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaag 153 |||||||| |||||||| || || ||||||||||| ||||||||||||||| |||| ||| Sbjct: 12 accaagaaggctggaatagttgggaaatatggtacccgttatggtgccagtttgcgaaag 71 Query: 154 cagatcaagaagatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaag 213 ||||| ||||| |||||||| ||||| ||||| || |||||||| ||||| ||| Sbjct: 72 cagattaagaaaatggaggttagccagcatagcaagtatttttgtgagttttgtggaaag 131 Query: 214 tttgctgtgaagaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaag 273 | || |||||||| |||||||| || |||||||| ||||| || || || || || || Sbjct: 132 tacgcagtgaagagaaaagcagtggggatttggggctgcaaagattgcggcaaagtcaaa 191 Query: 274 gctggcggtgcttacaccatgaacactgccagcgcggtcactgtcaggagcactatccg 332 || ||||||||||| || |||||||||| || || || || || |||||||| ||||| Sbjct: 192 gcaggcggtgcttatacattgaacactgcaagtgctgtgacagttaggagcacaatccg 250
>emb|BX826117.1|CNS0A7I3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 435 Score = 107 bits (54), Expect = 4e-20 Identities = 180/222 (81%) Strand = Plus / Plus Query: 105 tggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaagcagatcaagaa 164 |||||| ||||||||||| || ||||||| |||||| ||| | | |||||||| ||||| Sbjct: 72 tggaatcgtcggcaaatacggaacacgttttggtgcgagtttcagaaagcagattaagaa 131 Query: 165 gatggaggtgtctcagcactcaaagtacttctgtgagttctgtgggaagtttgctgtgaa 224 ||||||||| |||||| |||||||||||| |||||||||| |||| | || || Sbjct: 132 gatggaggtcagccagcacagcaagtacttctgttagttctgtggcaagtacggagtaaa 191 Query: 225 gaggaaagcagttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgc 284 | | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 192 gcgaaaggctgttggtatctggggttgcaaggattgtggcaaggtcaaggcagggggtgc 251 Query: 285 ttacaccatgaacactgccagcgcggtcactgtcaggagcac 326 |||||| |||||||| ||||| ||||| ||||| || ||||| Sbjct: 252 ttacacaatgaacaccgccagtgcggtgactgtaagaagcac 293
>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full insert sequence Length = 1791 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 75 cgacgagatgacgaagcgtaccaagaaagctggaattgtcggcaaatatggtacacgtta 134 |||| ||||||||||||| |||||||| || ||||| || |||||||||||||| | || Sbjct: 78 cgactagatgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggta 137 Query: 135 tggtgccagtctgcgtaagcag 156 |||||||||| ||||||||||| Sbjct: 138 tggtgccagtttgcgtaagcag 159
>gb|AY310766.1| Nicotiana benthamiana clone 7-083 unknown mRNA Length = 195 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 94 accaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctgcgtaag 153 ||||| || |||||||| || || ||||||||||| ||||||||||||||| |||| ||| Sbjct: 39 accaacaaggctggaatagttgggaaatatggtacccgttatggtgccagtttgcgaaag 98 Query: 154 cagatcaagaagatggaggt 173 ||||| ||||| |||||||| Sbjct: 99 cagattaagaaaatggaggt 118
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 124 ggtacacgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcac 183 |||||||| |||||||||||||| | |||||||||||||||||||| ||| ||| ||| Sbjct: 91900 ggtacacgatatggtgccagtcttaggaagcagatcaagaagatggaagtgagtcaacac 91841 Query: 184 tcaaagtacttctgtgagttctg 206 |||||||||||||||||||| Sbjct: 91840 aacaagtacttctgtgagttctg 91818
>gb|AF363029.3|AF363029 Branchiostoma belcheri 60S ribosomal protein L37A mRNA, complete cds Length = 447 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 |||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 60 cgttatggcgcctctctgcgtaagaccatcaagaagatggaggtgtctcagcactccaag 119 Query: 190 tac 192 ||| Sbjct: 120 tac 122
>gb|AY168770.1| Branchiostoma belcheri tsingtaunese ribosomal protein L37A mRNA, complete cds Length = 477 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 130 cgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactcaaag 189 |||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 73 cgttatggcgcctctctgcgtaagaccatcaagaagatggaggtgtctcagcactccaag 132 Query: 190 tac 192 ||| Sbjct: 133 tac 135
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 5071230 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 5071289 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 5071290 cgtaagatggtcaagaagatgga 5071312
>ref|NM_164628.1| Drosophila melanogaster Ribosomal protein L37A CG5827-RB, transcript variant B (RpL37A), mRNA Length = 696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 124 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 183 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 184 cgtaagatggtcaagaagatgga 206
>ref|NM_080042.2| Drosophila melanogaster Ribosomal protein L37A CG5827-RA, transcript variant A (RpL37A), mRNA Length = 659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 87 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 146 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 147 cgtaagatggtcaagaagatgga 169
>gb|AY071725.1| Drosophila melanogaster RH41593 full length cDNA Length = 524 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 87 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 146 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 147 cgtaagatggtcaagaagatgga 169
>gb|AY071189.1| Drosophila melanogaster RE23595 full length cDNA Length = 519 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 86 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 145 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 146 cgtaagatggtcaagaagatgga 168
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 127 acacgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactca 186 |||||||||||||| ||| | | |||||||| |||||||||||||| |||||| Sbjct: 44323 acacgttatggtgcgagtatcaggaagcagattaagaagatggaggtcagccagcacagc 44382 Query: 187 aagtacttctgtgagttctgtgg 209 ||||||||||||||||||||||| Sbjct: 44383 aagtacttctgtgagttctgtgg 44405 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 235 gttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatg 294 ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||||||||| ||| Sbjct: 44529 gttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgcttacacaatg 44588 Query: 295 aa 296 || Sbjct: 44589 aa 44590
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgccagtctg 147 ||||| |||||||| | |||||| || || ||||||||||| |||||||||||| ||| Sbjct: 127533 aagcgcaccaagaaggttggaatcgttggtaaatatggtacccgttatggtgcctccctg 127592 Query: 148 cgtaagcagatcaagaagatgga 170 |||||| | ||||||||||||| Sbjct: 127593 cgtaagatggtcaagaagatgga 127615
>gb|AF263518.1|AF263518 Arabidopsis thaliana protein synthesis initiation factor 4G (EIF4G) gene, complete cds Length = 10989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 127 acacgttatggtgccagtctgcgtaagcagatcaagaagatggaggtgtctcagcactca 186 |||||||||||||| ||| | | |||||||| |||||||||||||| |||||| Sbjct: 7212 acacgttatggtgcgagtatcaggaagcagattaagaagatggaggtcagccagcacagc 7271 Query: 187 aagtacttctgtgagttctgtgg 209 ||||||||||||||||||||||| Sbjct: 7272 aagtacttctgtgagttctgtgg 7294 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 235 gttggaatttggggatgcaaggactgtgggaaggtgaaggctggcggtgcttacaccatg 294 ||||| || ||||| |||||||| ||||| ||||| ||||| || ||||||||||| ||| Sbjct: 7418 gttggtatctggggttgcaaggattgtggcaaggtcaaggcaggtggtgcttacacaatg 7477 Query: 295 aa 296 || Sbjct: 7478 aa 7479
>gb|AY440738.1| Armigeres subalbatus ASAP ID: 39421 cytosolic large ribosomal subunit L37a mRNA sequence Length = 511 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgc 140 |||||||||| ||||| ||||| || || ||||||||||| ||||||||||| Sbjct: 75 aagcgtaccaggaaagtcggaatcgttggtaaatatggtacccgttatggtgc 127
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence Length = 226160 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 94 accaagaaagctggaattgtcggcaaatatgg 125 |||||||||||||| |||||||| |||||||| Sbjct: 81455 accaagaaagctgggattgtcggaaaatatgg 81486
>gb|AC161589.2| Mus musculus BAC clone RP24-383M20 from chromosome 9, complete sequence Length = 226186 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 accaagaaagctggaattgtcggcaaatatgg 125 |||||||||||||| |||||||| |||||||| Sbjct: 71317 accaagaaagctgggattgtcggaaaatatgg 71286
>ref|XM_001209368.1| Aspergillus terreus NIH2624 60S ribosomal protein L43 (ATEG_10066) mRNA, complete cds Length = 279 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 145 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 183 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 64 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 102
>gb|DQ413220.1| Acyrthosiphon pisum isolate WHAP0230 ribosomal protein L37A-like mRNA, complete cds Length = 279 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 91 cgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| ||||||| |||||||| || ||||||||||| || ||||||||| Sbjct: 10 cgtacaaagaaagtaggaattgtaggtaaatatggtacccgatatggtgcc 60
>ref|XM_675471.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7294.2), mRNA Length = 2133 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 145 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 183 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 64 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 102
>dbj|AB226168.1| Aspergillus oryzae cDNA, contig sequence: AoEST3026 Length = 520 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 145 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 183 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 129 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 167
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 145 ctgcgtaagcagatcaagaagatggaggtgtctcagcac 183 |||||||||||| | ||||||||||| ||||| |||||| Sbjct: 334897 ctgcgtaagcaggtgaagaagatggaagtgtcccagcac 334935
>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete sequence Length = 124955 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 124 ggtacacgttatggtgccagtctgcgtaagcagatcaagaagatgga 170 ||||| |||||| |||| ||| ||| ||||||||| ||||||||||| Sbjct: 24083 ggtacccgttatagtgctagtttgcataagcagattaagaagatgga 24129
>emb|CR759750.9| Zebrafish DNA sequence from clone DKEY-15A12 in linkage group 25, complete sequence Length = 44552 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 203 tctgtgggaagtttgctgtgaa 224 |||||||||||||||||||||| Sbjct: 37578 tctgtgggaagtttgctgtgaa 37557
>gb|DQ440218.1| Aedes aegypti clone AET-2431 60S ribosomal protein L37 mRNA, complete cds Length = 270 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 7 aagcgcaccaggaaagtcggaatcgtcggtaaatatggtacccgatatggtgcc 60
>gb|AC093430.3| Homo sapiens chromosome 1 clone RP11-171B15, complete sequence Length = 153414 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 gcataagttgttactagtgttt 376 |||||||||||||||||||||| Sbjct: 50901 gcataagttgttactagtgttt 50922
>emb|AM049134.1| Timarcha balearica mRNA for ribosomal protein L37Ae (rpL37Ae gene) Length = 279 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 |||||||| || |||| ||||||| || ||||||||||| |||||||||||| Sbjct: 7 aagcgtactaaaaaagttggaattactgggaaatatggtacccgttatggtgcc 60
>gb|AC098651.3| Homo sapiens chromosome 1 clone RP11-548C21, complete sequence Length = 78483 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 gcataagttgttactagtgttt 376 |||||||||||||||||||||| Sbjct: 58277 gcataagttgttactagtgttt 58298
>emb|CR937288.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YH02AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 599 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 94 aagcgcaccaggaaagtcggaatcgtcggtaaatatggtacccgatatggtgcc 147
>emb|CR937287.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB2YH02BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 580 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Minus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| |||| ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 487 aagcgcaccaggaaagtcggaatcgtcggtaaatatggtacccgatatggtgcc 434
>gb|AF401594.1| Ictalurus punctatus ribosomal protein L37a mRNA, complete cds Length = 400 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 88 aagcgtaccaagaaagctggaattgtcggcaaatatggtacacgttatggtgcc 141 ||||| |||||||| | |||||||| || ||||| ||||| |||||||||||| Sbjct: 23 aagcgcaccaagaaggtgggaattgttgggaaatacggtacccgttatggtgcc 76
>ref|NM_001065034.1| Oryza sativa (japonica cultivar-group) Os06g0703500 (Os06g0703500) mRNA, complete cds Length = 2242 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 1035 tcaagaagatgaaggtgtctcagca 1059
>gb|AC162520.7| Mus musculus chromosome 5, clone RP24-118C7, complete sequence Length = 187196 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 402 tgcagtttagacgatactttggatt 426 ||||||||||||||| ||||||||| Sbjct: 76645 tgcagtttagacgatgctttggatt 76669
>gb|AC134819.1| Homo sapiens chromosome 5 clone CTD-2027D15, complete sequence Length = 88419 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tgttttgtcctagtgaatcat 392 ||||||||||||||||||||| Sbjct: 27414 tgttttgtcctagtgaatcat 27394
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 29190666 tcaagaagatgaaggtgtctcagca 29190642
>emb|AL365232.24| Human DNA sequence from clone RP11-257K9 on chromosome 6 Contains the 3' end of the KCNQ5 gene for potassium voltage-gated channel KQT-like subfamily member 5, a novel gene, a RNA-binding protein with multiple splicing (RBPMS) pseudogene and the 3' end of the C6orf148 gene for chromosome 6 open reading frame 148, complete sequence Length = 120846 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 aggaaagcagttggaatttgg 246 ||||||||||||||||||||| Sbjct: 22378 aggaaagcagttggaatttgg 22398
>gb|AC008944.7| Homo sapiens chromosome 5 clone CTD-2323D3, complete sequence Length = 109760 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tgttttgtcctagtgaatcat 392 ||||||||||||||||||||| Sbjct: 7326 tgttttgtcctagtgaatcat 7306
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 57953 tcaagaagatgaaggtgtctcagca 57929
>dbj|AK102136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H14, full insert sequence Length = 2244 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 1037 tcaagaagatgaaggtgtctcagca 1061
>dbj|AK073179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004F21, full insert sequence Length = 2507 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 1368 tcaagaagatgaaggtgtctcagca 1392
>dbj|AK061641.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B03, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tcaagaagatggaggtgtctcagca 182 ||||||||||| ||||||||||||| Sbjct: 434 tcaagaagatgaaggtgtctcagca 458
>emb|AL844200.3| Human DNA sequence from clone RP11-552P19 on chromosome 1, complete sequence Length = 175707 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tgttttgtcctagtgaatcat 392 ||||||||||||||||||||| Sbjct: 84958 tgttttgtcctagtgaatcat 84938
>gb|DQ336954.1| Glycine max cultivar Williams 82 clone BAC gmw-74i13, complete sequence Length = 173654 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tgttctgttatgttattctt 497 |||||||||||||||||||| Sbjct: 22595 tgttctgttatgttattctt 22576
>ref|XM_001078842.1| PREDICTED: Rattus norvegicus mouse zinc finger protein 14-like (LOC499124), mRNA Length = 3714 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 atgcaaggactgtgggaagg 268 |||||||||||||||||||| Sbjct: 2040 atgcaaggactgtgggaagg 2059
>ref|XM_577780.2| PREDICTED: Rattus norvegicus similar to Zinc finger protein 566 (predicted) (RGD1563239_predicted), mRNA Length = 4240 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 atgcaaggactgtgggaagg 268 |||||||||||||||||||| Sbjct: 2208 atgcaaggactgtgggaagg 2227
>gb|AC166169.2| Mus musculus BAC clone RP23-193F7 from chromosome 14, complete sequence Length = 235897 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 caaagtacttctgtgagttctgtg 208 |||||||||||| ||||||||||| Sbjct: 65830 caaagtacttctttgagttctgtg 65853
>gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete sequence Length = 138020 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 aaagtacttctgtgagttct 205 |||||||||||||||||||| Sbjct: 3963 aaagtacttctgtgagttct 3944
>ref|XM_598735.2| PREDICTED: Bos taurus similar to zinc finger protein 333 (LOC520490), partial mRNA Length = 1119 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 atgcaaggactgtgggaagg 268 |||||||||||||||||||| Sbjct: 453 atgcaaggactgtgggaagg 472
>gb|AY914904.1| Schistosoma japonicum ribosomal protein smL37a mRNA, complete cds Length = 352 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 aaagcagttggaatttggggatgcaagg 256 ||||||||||| ||||||| |||||||| Sbjct: 188 aaagcagttggtatttgggaatgcaagg 215
>gb|AC129308.6| Mus musculus BAC clone RP24-308E2 from chromosome 14, complete sequence Length = 186606 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 caaagtacttctgtgagttctgtg 208 |||||||||||| ||||||||||| Sbjct: 121321 caaagtacttctttgagttctgtg 121344
>gb|U40955.1| Caenorhabditis elegans cosmid F48B9, complete sequence Length = 40014 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atgttctgttatgttattct 496 |||||||||||||||||||| Sbjct: 13588 atgttctgttatgttattct 13569
>gb|AC162930.5| Mus musculus BAC clone RP23-221B16 from chromosome 8, complete sequence Length = 222939 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 ttcagttccgttgcctgttt 444 |||||||||||||||||||| Sbjct: 12246 ttcagttccgttgcctgttt 12265
>ref|XM_817189.1| Trypanosoma brucei TREU927 60S ribosomal protein L37a (Tb10.100.0110) partial mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 caagaagatggaggtgtctcagca 182 ||||||| |||||||||||||||| Sbjct: 78 caagaagctggaggtgtctcagca 101
>ref|XM_817786.1| Trypanosoma brucei TREU927 60S ribosomal proteins L37 (Tb10.70.0465) partial mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 caagaagatggaggtgtctcagca 182 ||||||| |||||||||||||||| Sbjct: 78 caagaagctggaggtgtctcagca 101
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 ctgttatgttattcttccaccctt 505 |||||||||| ||||||||||||| Sbjct: 88609 ctgttatgtttttcttccaccctt 88586
>emb|AL354676.10| Human DNA sequence from clone RP11-48L13 on chromosome 9 Conatins a pseudogene similar to part of non-metastatic cells 4, protein expressed in (NME4), complete sequence Length = 72040 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 tgagttctgtgggaagtttgctgt 221 ||||||||||||||| |||||||| Sbjct: 60171 tgagttctgtgggaattttgctgt 60148
>gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y, complete sequence Length = 156357 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 369 tagtgttttgtcctagtga-atcatctg 395 ||||||||||||||||||| |||||||| Sbjct: 20794 tagtgttttgtcctagtgatatcatctg 20821
>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence Length = 174082 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 369 tagtgttttgtcctagtga-atcatctg 395 ||||||||||||||||||| |||||||| Sbjct: 117577 tagtgttttgtcctagtgatatcatctg 117550
>dbj|AB180430.1| Plutella xylostella mRNA for Ribosomal protein L37A, complete cds Length = 353 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 114 cggcaaatatggtacacgttatggtgcc 141 ||||||||||||||| ||||| |||||| Sbjct: 80 cggcaaatatggtacccgttacggtgcc 107
>ref|XM_960237.1| Neurospora crassa OR74A hypothetical protein (NCU03230.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 agatcaagaagatggaggtg 174 |||||||||||||||||||| Sbjct: 956 agatcaagaagatggaggtg 975
>gb|AY961542.1| Lysiphlebus testaceipes ribosomal protein L37a (RpL37a) mRNA, complete cds Length = 279 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 aaatatggtacacgttatggtgcc 141 ||||||||||| |||||||||||| Sbjct: 37 aaatatggtacccgttatggtgcc 60
>gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, complete sequence Length = 196153 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ttcagttccgttgcctgttt 444 |||||||||||||||||||| Sbjct: 105284 ttcagttccgttgcctgttt 105265
>emb|AL627128.16| Mouse DNA sequence from clone RP23-133J9 on chromosome 4, complete sequence Length = 183089 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tgaagaggaaagcagttgga 240 |||||||||||||||||||| Sbjct: 44051 tgaagaggaaagcagttgga 44032 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 79,155,726 Number of extensions: 4170497 Number of successful extensions: 78723 Number of sequences better than 10.0: 103 Number of HSP's gapped: 78697 Number of HSP's successfully gapped: 120 Length of query: 530 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 508 Effective length of database: 18,508,616,841 Effective search space: 9402377355228 Effective search space used: 9402377355228 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)