ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf63b01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ506129.1|HVU506129 Hordeum vulgare partial rga S-215 gene for NBS-LRR disease resistance protein homologue Length = 539 Score = 977 bits (493), Expect = 0.0 Identities = 502/505 (99%) Strand = Plus / Plus Query: 2230 tggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 2289 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tggggaaaacgactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 73 Query: 2290 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 2349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 133 Query: 2350 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 2409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 193 Query: 2410 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 2469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 253 Query: 2470 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 2529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 313 Query: 2530 ccatgattctagtcacgactcggcaaaaagaaatagcagaccaggttaagaaaatcgaag 2589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 ccatgattctagtcacgactcggcaaaaagaaatagcagaccaggttaagaaaatcgaag 373 Query: 2590 agccaaaagaactgaacaggttagatcctgaagagtttagggagttattccttgtatacg 2649 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 374 agccaaaagaactgaacaggttagatcctgaagagtttaggaagttattccttgtatacg 433 Query: 2650 tttttgatgttgagcaatatccgagggataaacatcatttgcttcacattggagatgaga 2709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 tttttgatgttgagcaatatccgagggataaacatcatttgcttcacattggagatgaga 493 Query: 2710 taatggaaaaattaaaaggctcccc 2734 ||||||||||||||||||||||||| Sbjct: 494 taatggaaaaattaaaaggctcccc 518
>emb|AJ506132.1|HVU506132 Hordeum vulgare partial rga S-236 gene for NBS-LRR disease resistance protein homologue Length = 536 Score = 511 bits (258), Expect = e-141 Identities = 429/486 (88%) Strand = Plus / Plus Query: 2230 tggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 2289 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 10 tggggaagacaactctgatacaacacatatataacaaccaacaagtacagaatcattttc 69 Query: 2290 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 2349 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||| Sbjct: 70 cagtcaggatttggatatgtgtgtcgttcaatttcaacctgggtaaggtgctagaacaga 129 Query: 2350 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 2409 ||||||| |||||| || |||||||||||||||| || ||| |||| ||||||||||| Sbjct: 130 ttaaaaggtataccacttcagttgaaggtgaaaacgagtgtgttaggccagaagagctgg 189 Query: 2410 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 2469 ||||||| ||| | ||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 190 ttgaacacagattgaaacaccaaaggttcttacttgtattggatgatatatggcagttta 249 Query: 2470 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 2529 |||||||||| ||||||||||| ||||||||| |||| |||||| ||||| ||||||| Sbjct: 250 ctgatgtggatgactggaaaaagctattgttgatactcaacaagtcacaagagaagggtt 309 Query: 2530 ccatgattctagtcacgactcggcaaaaagaaatagcagaccaggttaagaaaatcgaag 2589 || ||||||||||||| ||||||||||||||||||||||| | ||||||| ||| |||| Sbjct: 310 ccgtgattctagtcacaactcggcaaaaagaaatagcagatcgggttaaggaaactgaag 369 Query: 2590 agccaaaagaactgaacaggttagatcctgaagagtttagggagttattccttgtatacg 2649 |||||||||||||| || | |||| | || ||| |||||| |||||||||||||||| | Sbjct: 370 agccaaaagaactggacggtctagaacgtggagaatttaggaagttattccttgtatatg 429 Query: 2650 tttttgatgttgagcaatatccgagggataaacatcatttgcttcacattggagatgaga 2709 | ||||||| |||||||||||| || ||||||| |||||||||| ||| |||||||||| Sbjct: 430 tctttgatgctgagcaatatccaagagataaacttcatttgcttgacaccggagatgaga 489 Query: 2710 taatgg 2715 | |||| Sbjct: 490 tcatgg 495
>emb|AJ506131.1|HVU506131 Hordeum vulgare partial rga S-228 gene for NBS-LRR disease resistance protein homologue Length = 539 Score = 490 bits (247), Expect = e-134 Identities = 430/491 (87%) Strand = Plus / Plus Query: 2230 tggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 2289 |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 14 tggggaagacgactctgatacaacacatatataacaaccaacaagtacagaatcattttc 73 Query: 2290 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 2349 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||| Sbjct: 74 cagtcaggatttggatatgtgtgtcgttcaatttcaacctgggtaaggtgctagaacaga 133 Query: 2350 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 2409 ||||| | |||||| | | |||||||||||||| | |||| || | || ||||||||| Sbjct: 134 ttaaagaagatacccttacggttgaaggtgaaaatgggtgtagtacaacacaagagctga 193 Query: 2410 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 2469 ||||||| ||| | ||| || ||| ||||||||||||||||||||||||||| |||||| Sbjct: 194 ttgaacacagattgaaacacaaaagattcttacttgtattggatgatatatggcagttta 253 Query: 2470 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 2529 |||||||||| || |||||||| ||||| ||| | || |||||||| | ||||| ||||| Sbjct: 254 ctgatgtggatgattggaaaaagctattattgatgctcggcaagtcacgagaaaggggtt 313 Query: 2530 ccatgattctagtcacgactcggcaaaaagaaatagcagaccaggttaagaaaatcgaag 2589 || ||||||||||||| |||||||||||| |||||||||| ||||||||||||| | | Sbjct: 314 ccgtgattctagtcacaactcggcaaaaacaaatagcagatcaggttaagaaaactgtgg 373 Query: 2590 agccaaaagaactgaacaggttagatcctgaagagtttagggagttattccttgtatacg 2649 ||||||||||||||||| | ||||| |||| |||||||| | |||||||||||||||| Sbjct: 374 agccaaaagaactgaacggtttagaacctggagagtttaagaagttattccttgtatata 433 Query: 2650 tttttgatgttgagcaatatccgagggataaacatcatttgcttcacattggagatgaga 2709 | ||||||| |||||||||||| |||||||||| |||||||||| ||| ||||||||||| Sbjct: 434 tctttgatgctgagcaatatccaagggataaacttcatttgcttaacactggagatgaga 493 Query: 2710 taatggaaaaa 2720 |||||| |||| Sbjct: 494 taatgggaaaa 504
>emb|AJ506125.1|HVU506125 Hordeum vulgare partial rga S-153 gene for NBS-LRR disease resistance protein homologue Length = 524 Score = 361 bits (182), Expect = 1e-95 Identities = 287/322 (89%) Strand = Plus / Plus Query: 2230 tggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 2289 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 8 tggggaagacgactctgatacaacacatatatcacaaccaacaagtgcagaatcattttc 67 Query: 2290 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 2349 ||||||||||||||||||| || || |||||||||||||| ||||||||||| |||||| Sbjct: 68 cagtcaggatttggatatgcgtatccttcaatttcaacctcgataaggtgctacaagaga 127 Query: 2350 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 2409 ||||||||||||||| | | |||||||||||||| | |||| || | || ||||| ||| Sbjct: 128 ttaaaagatatacccttcctgttgaaggtgaaaatgggtgtagtacaacacaagagttga 187 Query: 2410 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 2469 ||||||| || | |||| || ||||||||||||||||||||||||||||||| |||||| Sbjct: 188 ttgaacacaggttgaaatacaaaaggttcttacttgtattggatgatatatggcagttta 247 Query: 2470 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 2529 |||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| |||| Sbjct: 248 ctgatgtggatgactggaaaaaactattgttgatactcagcaagtcacaagaaaatggtt 307 Query: 2530 ccatgattctagtcacgactcg 2551 ||||||||||||| || ||||| Sbjct: 308 ccatgattctagtaacaactcg 329 Score = 67.9 bits (34), Expect = 2e-07 Identities = 79/94 (84%) Strand = Plus / Plus Query: 2599 aactgaacaggttagatcctgaagagtttagggagttattccttgtatacgtttttgatg 2658 |||||||| | || || ||||||||||||||| |||||||||||||||| || ||||||| Sbjct: 377 aactgaacggtttggaacctgaagagtttaggaagttattccttgtatatgtctttgatg 436 Query: 2659 ttgagcaatatccgagggataaacatcatttgct 2692 || ||||| ||| || ||||| ||||||||| Sbjct: 437 atgggcaatgtccagggaataaagttcatttgct 470
>emb|AJ506127.1|HVU506127 Hordeum vulgare partial rga S-196 gene for NBS-LRR disease resistance protein homologue Length = 516 Score = 353 bits (178), Expect = 3e-93 Identities = 286/322 (88%) Strand = Plus / Plus Query: 2230 tggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaatcattttc 2289 ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 14 tggggaaaaccactctgatacaacacatatatcacaaccaacaagtgcagaatcattttc 73 Query: 2290 cagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagaga 2349 |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 74 cagtcaagatttggatatgtgtgtcgttcaatttcaacctggataaggtgctacaagaga 133 Query: 2350 ttaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctga 2409 |||||||||||||||||| |||||||||||||||||| || ||||| |||||||||||| Sbjct: 134 ttaaaagatatacccctgtagttgaaggtgaaaaagagagtcttagaacagaagagctga 193 Query: 2410 ttgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgggagttta 2469 ||||||||||| | ||||||| ||||||||||||| |||||||||| |||||| | |||| Sbjct: 194 ttgaacaaagattgaaatccaaaaggttcttacttatattggatgacatatggcaattta 253 Query: 2470 ctgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaagaaaagggtt 2529 | ||||||| |||||||| ||| ||||| | |||| ||| || | ||||||| |||| Sbjct: 254 ttaatgtggatgactggaacaaattattggttatacttggccagacagaagaaaaaggtt 313 Query: 2530 ccatgattctagtcacgactcg 2551 ||||||||||||||| ||||| Sbjct: 314 gcatgattctagtcacaactcg 335 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 2592 ccaaaagaactgaacaggttagatcctgaagagtttagggagttattccttgtatacgtt 2651 ||||||||||| ||| | ||||| ||||||||||||||| | ||||||||||||| || Sbjct: 376 ccaaaagaactaaacggtttagaacctgaagagtttaggaaattattccttgtatttgtc 435 Query: 2652 tttgatgttgagcaatatccgagggataaacatcattt 2689 ||||||| || ||||| ||| || |||||| |||||| Sbjct: 436 tttgatgatgggcaatgtccagggaataaacttcattt 473
>emb|AJ506143.1|HVU506143 Hordeum vulgare partial rga S-T48 gene for NBS-LRR disease resistance protein homologue Length = 451 Score = 297 bits (150), Expect = 1e-76 Identities = 246/278 (88%) Strand = Plus / Plus Query: 2274 gtgcagaatcattttccagtcaggatttggatatgtgtgtcattcaatttcaacctggat 2333 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1 gtgcagaatcattttccagtcaggatttggatatgcgtgtcgttcaatttcaacctcgat 60 Query: 2334 aaggtgcttgaagagattaaaagatatacccctgcagttgaaggtgaaaaagactgtatt 2393 |||||||| ||||||||||||||||||||| | | |||||||||||||| | |||| | Sbjct: 61 aaggtgctacaagagattaaaagatatacccttcctgttgaaggtgaaaatgggtgtagt 120 Query: 2394 agagcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggat 2453 | | || ||||| |||||||||| || | |||| || ||| |||||||||||||||||| Sbjct: 121 acaacacaagagttgattgaacacaggttgaaatacaaaagattcttacttgtattggat 180 Query: 2454 gatatatgggagtttactgatgtggacgactggaaaaaactattgttgctactgggcaag 2513 ||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 181 gatatatggcagtttactgatgtggatgactggaaaaaactattgttgatactcagcaag 240 Query: 2514 tcgcaagaaaagggttccatgattctagtcacgactcg 2551 || |||||||| ||||||||||||||||| || ||||| Sbjct: 241 tcacaagaaaatggttccatgattctagtaacaactcg 278 Score = 67.9 bits (34), Expect = 2e-07 Identities = 79/94 (84%) Strand = Plus / Plus Query: 2599 aactgaacaggttagatcctgaagagtttagggagttattccttgtatacgtttttgatg 2658 |||||||| | || || ||||||||||||||| ||||||||||| ||| || ||||||| Sbjct: 326 aactgaacggtttggaacctgaagagtttaggaagttattcctttcatatgtctttgatg 385 Query: 2659 ttgagcaatatccgagggataaacatcatttgct 2692 || ||||| ||| ||| |||||| ||||||||| Sbjct: 386 atgggcaatgtccaaggaataaacttcatttgct 419
>emb|AJ506124.1|HVU506124 Hordeum vulgare partial rga S-133-4 gene for NBS-LRR disease resistance protein homologue Length = 454 Score = 276 bits (139), Expect = 5e-70 Identities = 246/281 (87%), Gaps = 3/281 (1%) Strand = Plus / Plus Query: 2274 gtgcagaatcattttccagtcaggatttggatatgtgtgtcattcaatttcaacctggat 2333 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1 gtgcagaatcattttccagtcaggatttggatatgcgtgtcgttcaatttcaacctggat 60 Query: 2334 aaggtgcttgaagagattaaaagatataccc---ctgcagttgaaggtgaaaaagactgt 2390 |||||||||||| ||||||||||| |||||| ||| |||| ||||||||| | ||| Sbjct: 61 aaggtgcttgaacagattaaaagagatacccttcctgttgttgtaggtgaaaatgggtgt 120 Query: 2391 attagagcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattg 2450 | || | || ||||| | |||||||| || | |||| || ||| ||||||||||||||| Sbjct: 121 agtacaacacaagagttcattgaacacaggttgaaatgcaaaagattcttacttgtattg 180 Query: 2451 gatgatatatgggagtttactgatgtggacgactggaaaaaactattgttgctactgggc 2510 |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| | Sbjct: 181 gatgatatatggcagtttactgatgtggatgactggaaaaaactattgttgatactaaac 240 Query: 2511 aagtcgcaagaaaagggttccatgattctagtcacgactcg 2551 ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 241 aagtcacaagaaaagggttccatgattctagtaacaactcg 281 Score = 67.9 bits (34), Expect = 2e-07 Identities = 79/94 (84%) Strand = Plus / Plus Query: 2599 aactgaacaggttagatcctgaagagtttagggagttattccttgtatacgtttttgatg 2658 |||||||| | || || ||||||||||||||| ||||||||||| ||| || ||||||| Sbjct: 329 aactgaacggtttggaacctgaagagtttaggaagttattcctttcatatgtctttgatg 388 Query: 2659 ttgagcaatatccgagggataaacatcatttgct 2692 || ||||| ||| ||| |||||| ||||||||| Sbjct: 389 atgggcaatgtccaaggaataaacttcatttgct 422
>emb|AJ506126.1|HVU506126 Hordeum vulgare partial rga S-18 gene for NBS-LRR disease resistance protein homologue Length = 531 Score = 214 bits (108), Expect = 1e-51 Identities = 270/324 (83%) Strand = Plus / Plus Query: 2222 ggggggaatggggaagacaactctgatacaacacatatataccaaccaacaagtgcagaa 2281 ||||||| |||||||||||||||||||||||||||||||| | ||||||| |||| ||| Sbjct: 6 ggggggagtggggaagacaactctgatacaacacatatatcgcgaccaacaggtgctgaa 65 Query: 2282 tcattttccagtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgct 2341 | |||||||||| | |||||||||||||| ||||||||||||||| |||||||||||| | Sbjct: 66 taattttccagtaatgatttggatatgtgcgtcattcaatttcaatctggataaggtgtt 125 Query: 2342 tgaagagattaaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcaga 2401 ||| |||||||| | ||| | | |||||||| ||||||| || | | || | | || Sbjct: 126 agaacagattaaagtaggtactcgtccagttgaaagtgaaaaggagggcagtacaactga 185 Query: 2402 agagctgattgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatg 2461 |||| |||||||| ||||| | ||||| | |||||||||||||||||||||||||||||| Sbjct: 186 agagttgattgaagaaagattgaaatcaaaaaggttcttacttgtattggatgatatatg 245 Query: 2462 ggagtttactgatgtggacgactggaaaaaactattgttgctactgggcaagtcgcaaga 2521 | || ||| | ||||||| |||||| ||||||| ||| | |||| | | || ||||| Sbjct: 246 gcagattagtaatgtggatgactgggaaaaactcatgtcgatactcaaccaatcacaaga 305 Query: 2522 aaagggttccatgattctagtcac 2545 ||| ||||||||| |||||||||| Sbjct: 306 aaaaggttccatggttctagtcac 329
>emb|AJ506149.1|HVU506149 Hordeum vulgare partial rga S-133-2 gene for NBS-LRR disease resistance protein homologue Length = 460 Score = 172 bits (87), Expect = 5e-39 Identities = 231/279 (82%) Strand = Plus / Plus Query: 2274 gtgcagaatcattttccagtcaggatttggatatgtgtgtcattcaatttcaacctggat 2333 |||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| Sbjct: 1 gtgcagaatcattttccagtcaggttttggatatgtgtgtcgctcaatttcaatctggag 60 Query: 2334 aaggtgcttgaagagattaaaagatatacccctgcagttgaaggtgaaaaagactgtatt 2393 |||||||| ||| ||||| ||| | ||||||| ||| ||| ||||| | | | | | Sbjct: 61 aaggtgctagaacagattgaaacaagtacccctaaagtcgaaaatgaaagaaagggcagt 120 Query: 2394 agagcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggat 2453 | | |||||||| |||||||||||||| ||||||| | |||||||||||| ||||||||| Sbjct: 121 acaacagaagagttgattgaacaaagattaaaatctaaaaggttcttactcgtattggat 180 Query: 2454 gatatatgggagtttactgatgtggacgactggaaaaaactattgttgctactgggcaag 2513 ||||||||| || ||| ||| ||| |||||| |||| |||||||| |||| | || Sbjct: 181 gatatatggcagcttagcaatgaggatgactggggaaaattattgttgatactcgataaa 240 Query: 2514 tcgcaagaaaagggttccatgattctagtcacgactcgg 2552 || ||||||||||| ||||||||||| ||||| |||||| Sbjct: 241 tcacaagaaaagggctccatgattctcgtcacaactcgg 279 Score = 65.9 bits (33), Expect = 8e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 2601 ctgaacaggttagatcctgaagagtttagggagttattccttgtatacgtttttgatgtt 2660 |||||| | ||||| |||||||||||||| |||||||||||| || | |||| || | Sbjct: 328 ctgaacggtttagaacctgaagagtttagaaagttattccttgcatttatctttggtgat 387 Query: 2661 gagcaatatccgagggataaacatcatttgcttcacattggagatgagataatggaaaaa 2720 ||||||||||| | |||||||||| | || || | | ||||||| |||||||||||||| Sbjct: 388 gagcaatatccaaaggataaacattttctgtttgagactggagataagataatggaaaaa 447 Query: 2721 ttaaaaggctccc 2733 | || ||||||| Sbjct: 448 cttaagggctccc 460
>emb|AJ506144.1|HVU506144 Hordeum vulgare subsp. spontaneum partial rga S-T56 gene for NBS-LRR disease resistance protein homologue Length = 454 Score = 172 bits (87), Expect = 5e-39 Identities = 233/281 (82%), Gaps = 3/281 (1%) Strand = Plus / Plus Query: 2274 gtgcagaatcattttccagtcaggatttggatatgtgtgtcattcaatttcaacctggat 2333 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1 gtgcagaatcattttccagtcaggatttggatatgcgtgtcgttcaatttcaacctggat 60 Query: 2334 aaggtgcttgaagagattaaaagatatacc---cctgcagttgaaggtgaaaaagactgt 2390 |||||||||||| ||||||||||| ||||| |||| |||| ||||||||| | ||| Sbjct: 61 aaggtgcttgaacagattaaaagagatacccttcctgttgttgtaggtgaaaatgggtgt 120 Query: 2391 attagagcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattg 2450 | || | || ||||| | |||||||| || | | || || ||| ||||||||| ||||| Sbjct: 121 agtacaacacaagagttcattgaacacaggttgatatgcaaaagattcttacttatattg 180 Query: 2451 gatgatatatgggagtttactgatgtggacgactggaaaaaactattgttgctactgggc 2510 ||||| |||||| | |||| | ||| ||| |||||||| ||| ||||| | |||| ||| Sbjct: 181 gatgacatatggcaatttattaatgcggatgactggaacaaattattggttatacttggc 240 Query: 2511 aagtcgcaagaaaagggttccatgattctagtcacgactcg 2551 || | ||||||| |||| ||||||||||||||| ||||| Sbjct: 241 cagacagaagaaaaaggttgcatgattctagtcacaactcg 281 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 2592 ccaaaagaactgaacaggttagatcctgaagagtttagggagttattccttgtatacgtt 2651 ||||||||||| ||| | ||||| ||||||||||||||| | ||||||||||||| || Sbjct: 322 ccaaaagaactaaacggtttagaacctgaagagtttaggaaattattccttgtatttgtc 381 Query: 2652 tttgatgttgagcaatatccgagggataaacatcattt 2689 ||||||| || ||||| ||| || |||||| |||||| Sbjct: 382 tttgatgatgggcaatgtccagggaataaacttcattt 419
>emb|AJ780932.1| Avena damascena partial rga gene for putative resistance protein, clone DamII-7 Length = 436 Score = 119 bits (60), Expect = 7e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 2291 agtcaggatttggatatgtgtgtcattcaatttcaacctggataaggtgcttgaagagat 2350 ||||| ||||||||||||||| || ||||||||| || ||||||||||| ||| |||| Sbjct: 1 agtcatgatttggatatgtgtctcgctcaatttcagtctagataaggtgctagaacagat 60 Query: 2351 taaaagatatacccctgcagttgaaggtgaaaaagactgtattagagcagaagagctgat 2410 ||||| || |||| ||| ||||||| |||||| | | | || | | ||||||||||| Sbjct: 61 taaaacatgtacctctgaagttgaaaatgaaaagaagagcagtacaaccgaagagctgat 120 Query: 2411 tgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgg 2462 |||||||||| | ||||| | ||||||||||||||||||||||||||||||| Sbjct: 121 tgaacaaagattgaaatctaaaaggttcttacttgtattggatgatatatgg 172 Score = 52.0 bits (26), Expect = 0.013 Identities = 53/62 (85%) Strand = Plus / Plus Query: 2664 caatatccgagggataaacatcatttgcttcacattggagatgagataatggaaaaatta 2723 |||| ||| |||||||||||| | ||||| ||| ||||||| |||||||||||||| || Sbjct: 374 caatgtccaagggataaacattttctgcttgacactggagataagataatggaaaaacta 433 Query: 2724 aa 2725 || Sbjct: 434 aa 435
>emb|AJ506145.1|HVU506145 Hordeum vulgare partial rga S-T65 gene for NBS-LRR disease resistance protein homologue Length = 364 Score = 85.7 bits (43), Expect = 9e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 2400 gaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggatgatata 2459 |||||| |||||||| ||||| | ||||| | |||||||||||||||||||||||||||| Sbjct: 61 gaagagttgattgaagaaagattgaaatctaaaaggttcttacttgtattggatgatata 120 Query: 2460 tgggagtttactgatgtggacgactggaaaaaact 2494 ||| || ||| | |||||| |||||| ||||||| Sbjct: 121 tggcagattagtaatgtgggtgactgggaaaaact 155
>dbj|AK241237.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065128H08, full insert sequence Length = 2943 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2838 attatgtctgccttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttt 2897 |||||| |||| ||| ||||||| ||||| | ||| ||||| ||||||||||||||||| Sbjct: 515 attatgcctgcattgcagcttagttatgattatctaccttttcatctgcaacaatgtttt 574 Query: 2898 tcctattccgcattgtttcctgaagattac 2927 | ||||| || |||||||||||||||||| Sbjct: 575 ttctattgtgctttgtttcctgaagattac 604
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2838 attatgtctgccttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttt 2897 |||||| |||| ||| ||||||| ||||| | ||| ||||| ||||||||||||||||| Sbjct: 51019 attatgcctgcattgcagcttagttatgattatctaccttttcatctgcaacaatgtttt 51078 Query: 2898 tcctattccgcattgtttcctgaagattac 2927 | ||||| || |||||||||||||||||| Sbjct: 51079 ttctattgtgctttgtttcctgaagattac 51108 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Plus Query: 1620 gctgaagacttgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 49648 gctgacgacgtgctggacgagctcgactacttccgcatccaggacgagctc 49698 Score = 48.1 bits (24), Expect = 0.20 Identities = 48/56 (85%) Strand = Plus / Plus Query: 3096 catgacctactgcatgatttagcattgaaggttgtatcacatgattgtgttagttt 3151 |||||||| || ||| |||||||| ||||||||| ||| | ||| ||||||||||| Sbjct: 51277 catgacctgctacataatttagcagtgaaggttgcatctcgtgagtgtgttagttt 51332
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2838 attatgtctgccttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttt 2897 |||||| |||| ||| ||||||| ||||| | ||| ||||| ||||||||||||||||| Sbjct: 31889952 attatgcctgcattgcagcttagttatgattatctaccttttcatctgcaacaatgtttt 31890011 Query: 2898 tcctattccgcattgtttcctgaagattac 2927 | ||||| || |||||||||||||||||| Sbjct: 31890012 ttctattgtgctttgtttcctgaagattac 31890041 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Plus Query: 1620 gctgaagacttgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 31888581 gctgacgacgtgctggacgagctcgactacttccgcatccaggacgagctc 31888631 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2232 gggaagacaactctgatacaacacatatata 2262 |||||||||||||| |||||| ||||||||| Sbjct: 31889346 gggaagacaactctcatacaatacatatata 31889376
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2838 attatgtctgccttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttt 2897 |||||| |||| ||| ||||||| ||||| | ||| ||||| ||||||||||||||||| Sbjct: 62818 attatgcctgcattgcagcttagttatgattatctaccttttcatctgcaacaatgtttt 62877 Query: 2898 tcctattccgcattgtttcctgaagattac 2927 | ||||| || |||||||||||||||||| Sbjct: 62878 ttctattgtgctttgtttcctgaagattac 62907 Score = 61.9 bits (31), Expect = 1e-05 Identities = 46/51 (90%) Strand = Plus / Plus Query: 1620 gctgaagacttgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 61447 gctgacgacgtgctggacgagctcgactacttccgcatccaggacgagctc 61497 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2232 gggaagacaactctgatacaacacatatata 2262 |||||||||||||| |||||| ||||||||| Sbjct: 62212 gggaagacaactctcatacaatacatatata 62242
>ref|NM_001073305.1| Oryza sativa (japonica cultivar-group) Os12g0481400 (Os12g0481400) mRNA, complete cds Length = 4515 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 242 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 296 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 1494 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 1550 Score = 48.1 bits (24), Expect = 0.20 Identities = 51/60 (85%) Strand = Plus / Plus Query: 2202 gtgcttccggttattggtccggggggaatggggaagacaactctgatacaacacatatat 2261 |||||||| || |||||||||| || || |||||||||||| | | ||||||||||||| Sbjct: 826 gtgcttcccattgttggtccgggtggtatcgggaagacaacttttacacaacacatatat 885
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 17753155 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 17753101 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 17781204 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 17781150 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 17803725 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 17803671 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Minus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 17751903 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 17751847 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Minus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 17779955 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 17779899 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Minus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 17802476 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 17802420 Score = 48.1 bits (24), Expect = 0.20 Identities = 51/60 (85%) Strand = Plus / Minus Query: 2202 gtgcttccggttattggtccggggggaatggggaagacaactctgatacaacacatatat 2261 |||||||| || |||||||||| || || |||||||||||| | | ||||||||||||| Sbjct: 17752571 gtgcttcccattgttggtccgggtggtatcgggaagacaacttttacacaacacatatat 17752512
>emb|AJ506146.1|HVU506146 Hordeum vulgare partial rga S-T66 gene for NBS-LRR disease resistance protein homologue Length = 364 Score = 69.9 bits (35), Expect = 5e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 2400 gaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggatgatata 2459 |||||| |||||||| ||||| | ||||| | |||| ||||||||||||||||||||||| Sbjct: 61 gaagagttgattgaagaaagatttaaatctaaaaggctcttacttgtattggatgatata 120 Query: 2460 tgg 2462 ||| Sbjct: 121 tgg 123
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 149 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 203 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 28198 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 28252 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 1398 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 1454 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Plus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 29450 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 29506 Score = 48.1 bits (24), Expect = 0.20 Identities = 51/60 (85%) Strand = Plus / Plus Query: 2202 gtgcttccggttattggtccggggggaatggggaagacaactctgatacaacacatatat 2261 |||||||| || |||||||||| || || |||||||||||| | | ||||||||||||| Sbjct: 28782 gtgcttcccattgttggtccgggtggtatcgggaagacaacttttacacaacacatatat 28841
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 402 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 348 Score = 69.9 bits (35), Expect = 5e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| || |||||| ||||||||||||| Sbjct: 22923 tgctggacgagctcgactacttccgcatccaggatgagctcgatggcacgtacga 22869 Score = 50.1 bits (25), Expect = 0.050 Identities = 49/57 (85%) Strand = Plus / Minus Query: 2870 tcttcctttctatctgcaacaatgtttttcctattccgcattgtttcctgaagatta 2926 ||||||||| |||| ||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 21674 tcttccttttcatctacaacagtgtttctcctattgtgctttgtttcctgaagatta 21618
>emb|CT827955.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0117N13, complete sequence Length = 105220 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 5434 tgctggacgagctggactacttccgcatccaggacgagctc 5474
>emb|CR855147.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148A10, complete sequence Length = 96027 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 78878 tgctggacgagctggactacttccgcatccaggacgagctc 78918
>ref|NM_001065064.1| Oryza sativa (japonica cultivar-group) Os06g0707800 (Os06g0707800) mRNA, complete cds Length = 4015 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 350 tgctggacgagctggactacttccgcatccaggacgagctc 390 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Plus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| ||||||||||||||||| |||| || ||| Sbjct: 1639 aagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttg 1698 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 1699 ttccctgaagattac 1713 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||| ||||| ||||| ||||||||||||||| Sbjct: 1885 atgcatgatctactacatgagttagcattgaaggtt 1920
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 29429409 tgctggacgagctggactacttccgcatccaggacgagctc 29429369 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 29391169 tgctggacgagctcgactacttccgcatccaggacgagcttgatggcacctacga 29391115 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 |||| |||||| | ||||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 29407560 tgctcgacgagctcgactacttccgcatccaggacgagctcgatggcacctacga 29407506 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Minus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| |||| |||||||||||| | |||| || ||| Sbjct: 29414279 aagcttagctatgactatctccctttccatctacaacaatgttttacatattgtgctttg 29414220 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 29414219 ttccctgaagattac 29414205 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Minus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| ||||||||||||||||| |||| || ||| Sbjct: 29428120 aagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttg 29428061 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 29428060 ttccctgaagattac 29428046 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 22974298 atgcatgacctactacatgagttagcattgaaggtt 22974263 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 29405998 atgcatgacctactacatgagttagcattgaaggtt 29405963 Score = 52.0 bits (26), Expect = 0.013 Identities = 65/78 (83%) Strand = Plus / Minus Query: 2850 ttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgca 2909 ||||||||||||||||| | ||| ||||| |||| ||||||||||| | |||| || Sbjct: 29406244 ttgaagcttagctatgactatctatctttccatctacaacaatgtttcacatattgtgct 29406185 Query: 2910 ttgtttcctgaagattac 2927 ||||| |||||||||||| Sbjct: 29406184 ttgttccctgaagattac 29406167 Score = 50.1 bits (25), Expect = 0.050 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 |||| |||||| | ||||||||||||||||| ||||||||| Sbjct: 22976770 tgctcgacgagctcgactacttccgcatccaggacgagctc 22976730 Score = 50.1 bits (25), Expect = 0.050 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcac 1678 ||||||||||| | ||||||||||| ||||| |||||||| ||||||| Sbjct: 29415676 tgctggacgagctcgactacttccgtatccaggacgagcttgatggcac 29415628 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||| ||||| ||||| ||||||||||||||| Sbjct: 29427874 atgcatgatctactacatgagttagcattgaaggtt 29427839 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2215 ttggtccggggggaatggggaagacaactct 2245 ||||||| |||||||| |||||||||||||| Sbjct: 29406879 ttggtccagggggaatagggaagacaactct 29406849
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 140290 tgctggacgagctggactacttccgcatccaggacgagctc 140250 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 102050 tgctggacgagctcgactacttccgcatccaggacgagcttgatggcacctacga 101996 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 |||| |||||| | ||||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 118441 tgctcgacgagctcgactacttccgcatccaggacgagctcgatggcacctacga 118387 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Minus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| |||| |||||||||||| | |||| || ||| Sbjct: 125160 aagcttagctatgactatctccctttccatctacaacaatgttttacatattgtgctttg 125101 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 125100 ttccctgaagattac 125086 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Minus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| ||||||||||||||||| |||| || ||| Sbjct: 139001 aagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttg 138942 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 138941 ttccctgaagattac 138927 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 116879 atgcatgacctactacatgagttagcattgaaggtt 116844 Score = 52.0 bits (26), Expect = 0.013 Identities = 65/78 (83%) Strand = Plus / Minus Query: 2850 ttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgca 2909 ||||||||||||||||| | ||| ||||| |||| ||||||||||| | |||| || Sbjct: 117125 ttgaagcttagctatgactatctatctttccatctacaacaatgtttcacatattgtgct 117066 Query: 2910 ttgtttcctgaagattac 2927 ||||| |||||||||||| Sbjct: 117065 ttgttccctgaagattac 117048 Score = 50.1 bits (25), Expect = 0.050 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcac 1678 ||||||||||| | ||||||||||| ||||| |||||||| ||||||| Sbjct: 126557 tgctggacgagctcgactacttccgtatccaggacgagcttgatggcac 126509 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||| ||||| ||||| ||||||||||||||| Sbjct: 138755 atgcatgatctactacatgagttagcattgaaggtt 138720 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2215 ttggtccggggggaatggggaagacaactct 2245 ||||||| |||||||| |||||||||||||| Sbjct: 117760 ttggtccagggggaatagggaagacaactct 117730
>dbj|AK102129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085A01, full insert sequence Length = 2455 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 312 tgctggacgagctggactacttccgcatccaggacgagctc 352 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Plus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| ||||||||||||||||| |||| || ||| Sbjct: 1601 aagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttg 1660 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 1661 ttccctgaagattac 1675 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||| ||||| ||||| ||||||||||||||| Sbjct: 1847 atgcatgatctactacatgagttagcattgaaggtt 1882
>dbj|AK099567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034N02, full insert sequence Length = 4016 Score = 65.9 bits (33), Expect = 8e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 351 tgctggacgagctggactacttccgcatccaggacgagctc 391 Score = 61.9 bits (31), Expect = 1e-05 Identities = 64/75 (85%) Strand = Plus / Plus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 |||||||||||||| | ||| |||||| ||||||||||||||||| |||| || ||| Sbjct: 1640 aagcttagctatgactatctccctttccatctgcaacaatgttttatatattgtgctttg 1699 Query: 2913 tttcctgaagattac 2927 || |||||||||||| Sbjct: 1700 ttccctgaagattac 1714 Score = 48.1 bits (24), Expect = 0.20 Identities = 33/36 (91%) Strand = Plus / Plus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||| ||||| ||||| ||||||||||||||| Sbjct: 1886 atgcatgatctactacatgagttagcattgaaggtt 1921
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 63.9 bits (32), Expect = 3e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1591 tgcaaaagttgctggacttggcgcacaatgctgaagacttgctggacgagttggactact 1650 |||| ||| ||| |||||| ||| ||||||| || ||| |||| |||||| | ||||||| Sbjct: 2199072 tgcagaagctgcgggacttagcgtacaatgccgacgacgtgctcgacgagctcgactact 2199013 Query: 1651 tccgcatccacgacgagctc 1670 |||||||||| ||||||||| Sbjct: 2199012 tccgcatccaggacgagctc 2198993 Score = 56.0 bits (28), Expect = 8e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 2212 ttattggtccggggggaatggggaagacaactctgatacaacacatatataccaaccaac 2271 |||||||||| || || || ||||| || ||||| |||||||||||||||| | ||||| Sbjct: 2198418 ttattggtcctggaggcatagggaaaaccactctcatacaacacatatataatagccaac 2198359 Query: 2272 aagtgcagaatcattt 2287 ||||||| || ||||| Sbjct: 2198358 aagtgcaaaaccattt 2198343 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 2881 atctgcaacaatgtttttcctattccgcattgtttcctgaagattac 2927 ||||||||||||||||||| |||| || |||||||| ||||||||| Sbjct: 2197752 atctgcaacaatgtttttcttattgtgctttgtttcccgaagattac 2197706 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Minus Query: 2397 gcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggatga 2455 |||||||||||||||| ||||||| | ||||| | |||||| ||| || |||||||||| Sbjct: 2198236 gcagaagagctgattgtacaaagattgaaatcgaaaaggtttttatttatattggatga 2198178 Score = 48.1 bits (24), Expect = 0.20 Identities = 36/40 (90%) Strand = Plus / Minus Query: 2716 aaaaattaaaaggctcccctcttgctgcaaagaccgttgg 2755 ||||| ||||||||||||||||||| ||||| || ||||| Sbjct: 2197923 aaaaactaaaaggctcccctcttgcggcaaaaactgttgg 2197884
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 63.9 bits (32), Expect = 3e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1591 tgcaaaagttgctggacttggcgcacaatgctgaagacttgctggacgagttggactact 1650 |||| ||| ||| |||||| ||| ||||||| || ||| |||| |||||| | ||||||| Sbjct: 66974 tgcagaagctgcgggacttagcgtacaatgccgacgacgtgctcgacgagctcgactact 66915 Query: 1651 tccgcatccacgacgagctc 1670 |||||||||| ||||||||| Sbjct: 66914 tccgcatccaggacgagctc 66895 Score = 56.0 bits (28), Expect = 8e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 2212 ttattggtccggggggaatggggaagacaactctgatacaacacatatataccaaccaac 2271 |||||||||| || || || ||||| || ||||| |||||||||||||||| | ||||| Sbjct: 66320 ttattggtcctggaggcatagggaaaaccactctcatacaacacatatataatagccaac 66261 Query: 2272 aagtgcagaatcattt 2287 ||||||| || ||||| Sbjct: 66260 aagtgcaaaaccattt 66245 Score = 54.0 bits (27), Expect = 0.003 Identities = 42/47 (89%) Strand = Plus / Minus Query: 2881 atctgcaacaatgtttttcctattccgcattgtttcctgaagattac 2927 ||||||||||||||||||| |||| || |||||||| ||||||||| Sbjct: 65654 atctgcaacaatgtttttcttattgtgctttgtttcccgaagattac 65608 Score = 54.0 bits (27), Expect = 0.003 Identities = 51/59 (86%) Strand = Plus / Minus Query: 2397 gcagaagagctgattgaacaaagactaaaatccacaaggttcttacttgtattggatga 2455 |||||||||||||||| ||||||| | ||||| | |||||| ||| || |||||||||| Sbjct: 66138 gcagaagagctgattgtacaaagattgaaatcgaaaaggtttttatttatattggatga 66080 Score = 48.1 bits (24), Expect = 0.20 Identities = 36/40 (90%) Strand = Plus / Minus Query: 2716 aaaaattaaaaggctcccctcttgctgcaaagaccgttgg 2755 ||||| ||||||||||||||||||| ||||| || ||||| Sbjct: 65825 aaaaactaaaaggctcccctcttgcggcaaaaactgttgg 65786
>ref|NM_001065063.1| Oryza sativa (japonica cultivar-group) Os06g0707700 (Os06g0707700) mRNA, partial cds Length = 2874 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 |||| |||||| | ||||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 1080 tgctcgacgagctcgactacttccgcatccaggacgagctcgatggcacctacga 1134 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 2642 atgcatgacctactacatgagttagcattgaaggtt 2677 Score = 52.0 bits (26), Expect = 0.013 Identities = 65/78 (83%) Strand = Plus / Plus Query: 2850 ttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgca 2909 ||||||||||||||||| | ||| ||||| |||| ||||||||||| | |||| || Sbjct: 2396 ttgaagcttagctatgactatctatctttccatctacaacaatgtttcacatattgtgct 2455 Query: 2910 ttgtttcctgaagattac 2927 ||||| |||||||||||| Sbjct: 2456 ttgttccctgaagattac 2473 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2215 ttggtccggggggaatggggaagacaactct 2245 ||||||| |||||||| |||||||||||||| Sbjct: 1761 ttggtccagggggaatagggaagacaactct 1791
>ref|NM_001065062.1| Oryza sativa (japonica cultivar-group) Os06g0707400 (Os06g0707400) mRNA, partial cds Length = 2693 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 992 tgctggacgagctcgactacttccgcatccaggacgagcttgatggcacctacga 1046
>dbj|AK100720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116F01, full insert sequence Length = 2875 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 |||| |||||| | ||||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 1081 tgctcgacgagctcgactacttccgcatccaggacgagctcgatggcacctacga 1135 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 2643 atgcatgacctactacatgagttagcattgaaggtt 2678 Score = 52.0 bits (26), Expect = 0.013 Identities = 65/78 (83%) Strand = Plus / Plus Query: 2850 ttgaagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgca 2909 ||||||||||||||||| | ||| ||||| |||| ||||||||||| | |||| || Sbjct: 2397 ttgaagcttagctatgactatctatctttccatctacaacaatgtttcacatattgtgct 2456 Query: 2910 ttgtttcctgaagattac 2927 ||||| |||||||||||| Sbjct: 2457 ttgttccctgaagattac 2474 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2215 ttggtccggggggaatggggaagacaactct 2245 ||||||| |||||||| |||||||||||||| Sbjct: 1762 ttggtccagggggaatagggaagacaactct 1792
>dbj|AK067727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118E14, full insert sequence Length = 2027 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 326 tgctggacgagctcgactacttccgcatccaggacgagcttgatggcacctacga 380
>dbj|AK066341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063P11, full insert sequence Length = 2694 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctccatggcacgtacga 1684 ||||||||||| | ||||||||||||||||| |||||||| ||||||| ||||| Sbjct: 993 tgctggacgagctcgactacttccgcatccaggacgagcttgatggcacctacga 1047
>emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-112 gene) Length = 4654 Score = 60.0 bits (30), Expect = 5e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 2853 aagcttagctatgaatttcttcctttctatctgcaacaatgtttttcctattccgcattg 2912 ||||||||||| || | ||| ||||| |||| |||||||||||||| |||| |||||| Sbjct: 1542 aagcttagctacgactatctcccttttcatctacaacaatgtttttcttattgtgcattg 1601 Query: 2913 tttcctgaagatta 2926 ||||| |||||||| Sbjct: 1602 tttccagaagatta 1615
>emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue (rga S-9217 gene) Length = 5145 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1635 gacgagttggactacttccgcatccacgacgagctccatggcacgtacgatgc 1687 |||||| | ||||||||||||||||| ||||||||| ||||||| ||| |||| Sbjct: 393 gacgagctcgactacttccgcatccaggacgagctcgatggcacataccatgc 445
>emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-226 gene) Length = 5451 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1635 gacgagttggactacttccgcatccacgacgagctccatggcacgtacgatgc 1687 |||||| | ||||||||||||||||| ||||||||| ||||||| ||| |||| Sbjct: 536 gacgagctcgactacttccgcatccaggacgagctcgatggcacataccatgc 588
>emb|AJ506121.1|HVU506121 Hordeum vulgare partial rga S-112 gene for NBS-LRR disease resistance protein homologue Length = 533 Score = 58.0 bits (29), Expect = 2e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 2222 ggggggaatggggaagacaactctgatacaacacatatata 2262 ||||||| |||||||||||||||| | |||||||||||||| Sbjct: 6 ggggggagtggggaagacaactctcacacaacacatatata 46
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 40783 atgcatgacctactacatgagttagcattgaaggtt 40748 Score = 50.1 bits (25), Expect = 0.050 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 |||| |||||| | ||||||||||||||||| ||||||||| Sbjct: 43255 tgctcgacgagctcgactacttccgcatccaggacgagctc 43215
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 56.0 bits (28), Expect = 8e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 3093 atgcatgacctactgcatgatttagcattgaaggtt 3128 |||||||||||||| ||||| ||||||||||||||| Sbjct: 149120 atgcatgacctactacatgagttagcattgaaggtt 149085 Score = 50.1 bits (25), Expect = 0.050 Identities = 37/41 (90%) Strand = Plus / Minus Query: 1630 tgctggacgagttggactacttccgcatccacgacgagctc 1670 |||| |||||| | ||||||||||||||||| ||||||||| Sbjct: 151592 tgctcgacgagctcgactacttccgcatccaggacgagctc 151552
>ref|NM_001053027.1| Oryza sativa (japonica cultivar-group) Os02g0262800 (Os02g0262800) mRNA, complete cds Length = 4510 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 1066 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 1115
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 9258161 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 9258210 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || ||||| || ||||||||||| Sbjct: 9237951 attgcacaaagactgaaatccaaaagatttttactcgtcttggatgatat 9238000
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 18415 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 18464
>dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0049K19 Length = 131932 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 117879 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 117928 Score = 44.1 bits (22), Expect = 3.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || ||||| || ||||||||||| Sbjct: 97669 attgcacaaagactgaaatccaaaagatttttactcgtcttggatgatat 97718
>emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 in linkage group 18, complete sequence Length = 116706 Score = 52.0 bits (26), Expect = 0.013 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 |||||||||||||||||||||||||| Sbjct: 10337 gaaccgaaccaaaccaaaccaaccaa 10312
>gb|AF516891.1| Oryza sativa (japonica cultivar-group) NBS-LRR protein (rNBS41) gene, partial cds Length = 934 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 215 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 264
>dbj|AK073576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046M12, full insert sequence Length = 4511 Score = 52.0 bits (26), Expect = 0.013 Identities = 44/50 (88%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatat 2458 |||| ||||||||| ||||||| ||| || |||||||| ||||||||||| Sbjct: 1067 attgcacaaagactgaaatccaaaagatttttacttgtcttggatgatat 1116
>emb|AJ506134.1|HVU506134 Hordeum vulgare partial rga S-237gap gene for NBS-LRR disease resistance protein homologue Length = 422 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgg 2462 |||| ||| ||||| || |||| |||||||||| |||| ||||||||||||||| Sbjct: 169 attgcacagagacttaagtccaaaaggttcttaattgtcttggatgatatatgg 222
>emb|AJ506133.1|HVU506133 Hordeum vulgare partial rga S-237 gene for NBS-LRR disease resistance protein homologue Length = 534 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Plus Query: 2409 attgaacaaagactaaaatccacaaggttcttacttgtattggatgatatatgg 2462 |||| ||| ||||| || |||| |||||||||| |||| ||||||||||||||| Sbjct: 208 attgcacagagacttaagtccaaaaggttcttaattgtcttggatgatatatgg 261
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 50.1 bits (25), Expect = 0.050 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 aaccgaaccaaaccaaaccaaccaa 26 ||||||||||||||||||||||||| Sbjct: 190885 aaccgaaccaaaccaaaccaaccaa 190909
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 50.1 bits (25), Expect = 0.050 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 aaccgaaccaaaccaaaccaaccaa 26 ||||||||||||||||||||||||| Sbjct: 35379 aaccgaaccaaaccaaaccaaccaa 35403
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 48.1 bits (24), Expect = 0.20 Identities = 24/24 (100%) Strand = Plus / Minus Query: 114 atccatgtgctggaagcggaagca 137 |||||||||||||||||||||||| Sbjct: 502516 atccatgtgctggaagcggaagca 502493
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 gcccgccaggtgcttgtgcttattccc 215 |||||||||||||||||| |||||||| Sbjct: 273671 gcccgccaggtgcttgtgtttattccc 273697
>gb|DQ128004.1| Triticum aestivum clone P6-5 NBS-LRR type RGA gene, partial cds Length = 535 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2432 aaggttcttacttgtattggatgatatatgg 2462 |||||||||| |||| ||||||||||||||| Sbjct: 225 aaggttcttaattgtcttggatgatatatgg 255
>gb|DQ128003.1| Triticum aestivum clone Cs6-1 NBS-LRR type RGA gene, partial cds Length = 534 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2432 aaggttcttacttgtattggatgatatatgg 2462 |||||||||| |||| ||||||||||||||| Sbjct: 225 aaggttcttaattgtcttggatgatatatgg 255
>gb|DQ128002.1| Triticum aestivum clone A6-2 NBS-LRR type RGA gene, partial cds Length = 535 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2432 aaggttcttacttgtattggatgatatatgg 2462 |||||||||| |||| ||||||||||||||| Sbjct: 225 aaggttcttaattgtcttggatgatatatgg 255
>gb|DQ128001.1| Triticum aestivum clone A6-1 NBS-LRR type RGA gene, partial cds Length = 535 Score = 46.1 bits (23), Expect = 0.79 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2432 aaggttcttacttgtattggatgatatatgg 2462 |||||||||| |||| ||||||||||||||| Sbjct: 225 aaggttcttaattgtcttggatgatatatgg 255
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Plus Query: 764 atttctgatttaactttaccaaa 786 ||||||||||||||||||||||| Sbjct: 78652 atttctgatttaactttaccaaa 78674
>gb|AC165283.2| Mus musculus BAC clone RP24-348M18 from chromosome 12, complete sequence Length = 171825 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 aaccgaaccaaaccaaaccaaccaaga 28 |||| |||||||||||||||||||||| Sbjct: 39462 aaccaaaccaaaccaaaccaaccaaga 39436
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete sequence Length = 125291 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Minus Query: 764 atttctgatttaactttaccaaa 786 ||||||||||||||||||||||| Sbjct: 116517 atttctgatttaactttaccaaa 116495
>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete sequence Length = 205358 Score = 46.1 bits (23), Expect = 0.79 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 aaccgaaccaaaccaaaccaaccaaga 28 |||| |||||||||||||||||||||| Sbjct: 96191 aaccaaaccaaaccaaaccaaccaaga 96217
>emb|AL691492.13| Mouse DNA sequence from clone RP23-146B4 on chromosome 1, complete sequence Length = 129600 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1169 gctcccatctcttctcacttgcc 1191 ||||||||||||||||||||||| Sbjct: 60553 gctcccatctcttctcacttgcc 60531
>emb|AL593850.10| Mouse DNA sequence from clone RP23-436B15 on chromosome 1, complete sequence Length = 197663 Score = 46.1 bits (23), Expect = 0.79 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1169 gctcccatctcttctcacttgcc 1191 ||||||||||||||||||||||| Sbjct: 67053 gctcccatctcttctcacttgcc 67075
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 16532971 gaaccgaaccaaaccaaaccaa 16532992
>gb|DQ836239.1| Zea mays putative auxin efflux carrier (PIN1a) gene, complete cds Length = 5152 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 |||||||||| ||||||||||||||| Sbjct: 3383 gaaccgaaccgaaccaaaccaaccaa 3408
>gb|AC189306.1| Brassica rapa subsp. pekinensis clone KBrB032C14, complete sequence Length = 104954 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 61285 gaaccgaaccaaaccaaaccaa 61306
>gb|AC183705.4| Nomascus leucogenys leucogenys clone CH271-277D4, complete sequence Length = 61935 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 15794 gaaccgaaccaaaccaaaccaa 15815
>gb|AC187376.3| Pan troglodytes BAC clone CH251-415F11 from chromosome 7, complete sequence Length = 181935 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 151499 gaaccgaaccaaaccaaaccaa 151520
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1145 ttgcgggccaaggcgaaaaacg 1166 |||||||||||||||||||||| Sbjct: 3511322 ttgcgggccaaggcgaaaaacg 3511343
>emb|CT025731.18| Mouse DNA sequence from clone RP24-85N6 on chromosome 17, complete sequence Length = 226653 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 124647 gaaccgaaccaaaccaaaccaa 124626
>gb|AC130672.11| Mus musculus chromosome 1, clone RP24-95L18, complete sequence Length = 179753 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 |||||||||||||||||| ||||||| Sbjct: 101914 gaaccgaaccaaaccaaaacaaccaa 101939
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 177262 gaaccgaaccaaaccaaaccaa 177283
>ref|XM_641686.1| Dictyostelium discoideum AX4 SCY1 family protein kinase (scy2) mRNA, complete cds Length = 3378 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 771 atttaactttaccaaatagttt 792 |||||||||||||||||||||| Sbjct: 2009 atttaactttaccaaatagttt 2030
>gb|AC166105.4| Mus musculus BAC clone RP23-251L22 from chromosome 14, complete sequence Length = 231837 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2709 ataatggaaaaattaaaaggct 2730 |||||||||||||||||||||| Sbjct: 121873 ataatggaaaaattaaaaggct 121852
>gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, complete sequence Length = 173437 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 143442 gaaccgaaccaaaccaaaccaa 143421 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 143497 gaaccgaaccaaaccaaaccaa 143476
>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence Length = 161299 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 160255 gaaccgaaccaaaccaaaccaa 160276 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 160310 gaaccgaaccaaaccaaaccaa 160331
>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0059C14, complete sequence Length = 142138 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2297 gatttggatatgtgtgtcattcaatttcaa 2326 ||||||| |||||||||| ||||||||||| Sbjct: 115938 gatttgggtatgtgtgtccttcaatttcaa 115909
>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence Length = 152106 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 127610 gaaccgaaccaaaccaaaccaa 127631
>gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, complete sequence Length = 179544 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 24348 gaaccgaaccaaaccaaaccaa 24369
>gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 158698 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2856 cttagctatgaatttcttcctttcta 2881 ||||||||||||||||||| |||||| Sbjct: 24309 cttagctatgaatttcttcttttcta 24284
>gb|AC162793.8| Mus musculus chromosome 3, clone RP24-347H11, complete sequence Length = 154379 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 78901 gaaccgaaccaaaccaaaccaa 78922
>gb|AY573771.1| Drosophila simulans isolate W75 RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573770.1| Drosophila simulans isolate W74 RAD23 protein (rad23) gene, partial cds Length = 783 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573769.1| Drosophila simulans isolate W66 RAD23 protein (rad23) gene, partial cds Length = 783 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573768.1| Drosophila simulans isolate Trinidad RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573767.1| Drosophila simulans isolate Tamia RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573766.1| Drosophila simulans isolate Seych RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573765.1| Drosophila simulans isolate NewGuinea RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573764.1| Drosophila simulans isolate Morrow RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573763.1| Drosophila simulans isolate Lima RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573762.1| Drosophila simulans isolate Impala RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AY573761.1| Drosophila simulans isolate Cook RAD23 protein (rad23) gene, partial cds Length = 784 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3134 acatgattgtgttagttttcct 3155 |||||||||||||||||||||| Sbjct: 264 acatgattgtgttagttttcct 285
>gb|AC087730.2| Pan troglodytes clone RP43-89H17, complete sequence Length = 148293 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 82198 gaaccgaaccaaaccaaaccaa 82219
>gb|AC132570.3| Mus musculus BAC clone RP24-531D1 from chromosome 5, complete sequence Length = 183005 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 104374 gaaccgaaccaaaccaaaccaa 104395
>gb|AC164002.4| Mus musculus chromosome 3, clone RP24-114A9, complete sequence Length = 198340 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 137452 gaaccgaaccaaaccaaaccaa 137431
>gb|AC157818.5| Mus musculus chromosome 3, clone RP24-268H11, complete sequence Length = 171547 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 158080 gaaccgaaccaaaccaaaccaa 158101
>gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complete sequence Length = 155881 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 117518 gaaccgaaccaaaccaaaccaa 117539
>ref|XM_856421.1| PREDICTED: Canis familiaris hypothetical protein LOC608369 (LOC608369), mRNA Length = 1674 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 1187 gaaccgaaccaaaccaaaccaa 1208
>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete sequence Length = 147557 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 56456 gaaccgaaccaaaccaaaccaa 56435
>gb|AC144935.3| Mus musculus BAC clone RP24-340M21 from chromosome 9, complete sequence Length = 109624 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 62443 gaaccgaaccaaaccaaaccaa 62464
>gb|AC108949.4| Mus musculus BAC clone RP23-451K2 from 6, complete sequence Length = 181571 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 aaccgaaccaaaccaaaccaaccaag 27 |||| ||||||||||||||||||||| Sbjct: 109604 aaccaaaccaaaccaaaccaaccaag 109629
>gb|AC101679.8| Mus musculus chromosome 17, clone RP23-173O19, complete sequence Length = 132957 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 93590 gaaccgaaccaaaccaaaccaa 93569
>gb|AC135241.3| Mus musculus chromosome UNK clone RP24-340G21, complete sequence Length = 109610 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 62429 gaaccgaaccaaaccaaaccaa 62450
>gb|AC158749.5| Mus musculus chromosome 7, clone RP23-285C18, complete sequence Length = 237364 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 69961 gaaccgaaccaaaccaaaccaa 69940
>gb|AY130785.1| Citrus grandis x Poncirus trifoliata USDA17-47 putative citrus disease resistance protein 16R1-13 gene, partial cds Length = 518 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2446 tattggatgatatatgggagtt 2467 |||||||||||||||||||||| Sbjct: 236 tattggatgatatatgggagtt 257
>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence Length = 231917 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 34589 gaaccgaaccaaaccaaaccaa 34610
>dbj|AK164992.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130109M03 product:bone morphogenetic protein receptor, type 1A, full insert sequence Length = 1412 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2709 ataatggaaaaattaaaaggct 2730 |||||||||||||||||||||| Sbjct: 197 ataatggaaaaattaaaaggct 176
>gb|AC079600.19| Homo sapiens 12 BAC RP11-609L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158395 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2298 atttggatatgtgtgtcattca 2319 |||||||||||||||||||||| Sbjct: 60889 atttggatatgtgtgtcattca 60868
>dbj|AK052191.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330005N16 product:unclassifiable, full insert sequence Length = 3238 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 2295 gaaccgaaccaaaccaaaccaa 2274
>emb|CR361557.15| Zebrafish DNA sequence from clone DKEY-78P8 in linkage group 13, complete sequence Length = 150816 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 ||||||||||||| |||||||||||| Sbjct: 48126 gaaccgaaccaaaacaaaccaaccaa 48151
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 3.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2297 gatttggatatgtgtgtcattcaatttcaa 2326 ||||||| |||||||||| ||||||||||| Sbjct: 8817167 gatttgggtatgtgtgtccttcaatttcaa 8817138
>emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chromosome 1q41-42.1 Contains the 3' end of the GALNT2 gene for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) and two novel genes, complete sequence Length = 73454 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 39476 gaaccgaaccaaaccaaaccaa 39455
>gb|AC162923.2| Mus musculus BAC clone RP23-304O17 from chromosome 17, complete sequence Length = 192669 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 27407 gaaccgaaccaaaccaaaccaa 27386
>gb|AF333333.1|AF333332S2 Mus musculus ATP-gated ionotropic P2X5 receptor subunit gene, exons 2 through 13 and complete cds Length = 9120 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 5512 gaaccgaaccaaaccaaaccaa 5533
>emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chromosome 11 Contains the 3' end of the Atp2a3 gene for ubiquitous Ca++ transporting ATPase, the P2rx1 and P2rx5 genes for purinergic receptor P2X ligand-gated ion channel 1 and 5, 111 novel genes, the Camkk1 gene for calcium/calmodulin-dependent protein kinase kinase 1 alpha, the Itgae gene for epithelial-associated integrin alpha E, the Gsg2 gene for germ cell-specific gene 2 protein, the gene for a novel protein similar to human tax interacting protein 1, the Ctns gene for nephropathic cystinosis protein and five CpG islands, complete sequence Length = 224037 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 192907 gaaccgaaccaaaccaaaccaa 192928
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2699 tggagatgagataatggaaaaattaa 2724 |||||||||||| ||||||||||||| Sbjct: 143755 tggagatgagattatggaaaaattaa 143780
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 ||||| |||||||||||||||||||| Sbjct: 90248 gaaccaaaccaaaccaaaccaaccaa 90273
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 117269 gaaccgaaccaaaccaaaccaa 117290
>emb|AL935114.8| Zebrafish DNA sequence from clone CH211-182P11, complete sequence Length = 152177 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaaccgaaccaaaccaaaccaaccaa 26 ||||||||||||||||||||| |||| Sbjct: 139643 gaaccgaaccaaaccaaaccagccaa 139618
>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete sequence Length = 223392 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 222765 gaaccgaaccaaaccaaaccaa 222786
>emb|CT025557.11| Mouse DNA sequence from clone RP23-356F21 on chromosome 13, complete sequence Length = 186496 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 8458 gaaccgaaccaaaccaaaccaa 8479
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 169051 gaaccgaaccaaaccaaaccaa 169072
>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 Length = 90596 Score = 44.1 bits (22), Expect = 3.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2699 tggagatgagataatggaaaaattaa 2724 |||||||||||| ||||||||||||| Sbjct: 50218 tggagatgagattatggaaaaattaa 50193
>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the 3' end of a novel gene, the gene for a novel protein similar to nascent polypeptide-associated complex alpha polypeptide Naca, the Tbrg4 gene for transforming growth factor beta regulated gene 4, the Wap gene for whey acidic protein, an ethanol induced 6 (Etohi6) pseudogene, two novel genes, the Ramp3 gene for receptor (calcitonin) activity modifying protein 3, a lactate dehydrogenase 1 A chain (Ldh1) pseudogene, a mitochondrial ribosomal protein L36 (Mrpl36) pseudogene, a retinoblastoma binding protein 5 (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a) pseudogene and two CpG islands, complete sequence Length = 225879 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 150661 gaaccgaaccaaaccaaaccaa 150682
>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete sequence Length = 216706 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 187091 gaaccgaaccaaaccaaaccaa 187112
>emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chromosome 4, complete sequence Length = 248479 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 211204 gaaccgaaccaaaccaaaccaa 211225
>dbj|D45007.1|MUSBMP24F Mus musculus domesticus Bmpr gene for BMP-2/4 type I receptor, intron3 and exon4 partial sequence Length = 89 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2709 ataatggaaaaattaaaaggct 2730 |||||||||||||||||||||| Sbjct: 68 ataatggaaaaattaaaaggct 47
>emb|AL772269.4| Mouse DNA sequence from clone RP23-31K8 on chromosome X, complete sequence Length = 119972 Score = 44.1 bits (22), Expect = 3.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaaccgaaccaaaccaaaccaa 22 |||||||||||||||||||||| Sbjct: 1373 gaaccgaaccaaaccaaaccaa 1394 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 558,722,629 Number of extensions: 30307010 Number of successful extensions: 197283 Number of sequences better than 10.0: 129 Number of HSP's gapped: 197277 Number of HSP's successfully gapped: 206 Length of query: 3206 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 3183 Effective length of database: 18,503,978,556 Effective search space: 58898163743748 Effective search space used: 58898163743748 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
