ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf60h16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os02g06370:12002.t00535:unspliced-genomic DNA binding pr... 83 1e-92
2LOC_Os06g05350:12006.t00424:unspliced-genomic DNA-binding pr... 53 3e-21
3LOC_Os08g26520:12008.t02418:unspliced-genomic hypothetical p... 28 1.1
4LOC_Os12g07830:12012.t00665:unspliced-genomic OsAPx5 - Strom... 34 2.3
5LOC_Os03g40560:12003.t03483:unspliced-genomic retrotransposo... 34 2.3
6LOC_Os07g47040:12007.t04340:unspliced-genomic expressed protein 33 3.2
7LOC_Os06g38340:12006.t03529:unspliced-genomic receptor-like ... 29 4.6
8LOC_Os09g26330:12009.t02312:unspliced-genomic hypro1, putative 32 6.1
9LOC_Os09g10840:12009.t00874:unspliced-genomic transcription ... 32 6.1
10LOC_Os04g21350:12004.t01868:unspliced-genomic flowering prom... 32 6.1
11LOC_Os09g07170:12009.t00513:unspliced-genomic retrotransposo... 32 6.1
12LOC_Os03g56530:12003.t04911:unspliced-genomic retrotransposo... 32 8.3

>LOC_Os02g06370:12002.t00535:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 4153
 Score = 78.5 bits (165), Expect(9) = 1e-92
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +3 / +2

                                            
Query: 351  QLFALSPTEVGSLISLGPAESCEFFHDPSMKS 446
            QLFALSPTEVGSLISLGPAESCEFFHDPSMKS
Sbjct: 1991 QLFALSPTEVGSLISLGPAESCEFFHDPSMKS 2086



 Score = 75.8 bits (159), Expect(9) = 1e-92
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +3 / +2

                                                  
Query: 243  LFTKLESGGSRVNRNGSVMLTFFPAVGQRKYDYTKKQL 356
            +F   +SGGSRVN+NGSVMLTFFPAVGQRKYDY+KKQ+
Sbjct: 1328 IFLFHQSGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQV 1441



 Score = 63.4 bits (132), Expect(9) = 1e-92
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3 / +1

                                             
Query: 162  ENASAKKFASYTVFKGKAALSISPILPLFTKLE 260
            EN S +KFASYTVFKGKAALS+ PILP F+KLE
Sbjct: 1171 ENTSGRKFASYTVFKGKAALSMQPILPSFSKLE 1269



 Score = 57.9 bits (120), Expect(9) = 1e-92
 Identities = 24/50 (48%), Positives = 29/50 (58%)
 Frame = +3 / +3

                                                              
Query: 654  THPQSAPTSASKPRFERPNPDSEWDXXXXXXXXXXXEGFRHHRSSPLKCV 803
            T+ Q +P+ ASKPR ERP+PDSEW+           EGF HHR   L  V
Sbjct: 3630 TNHQPSPSPASKPRVERPHPDSEWER*SSLVGTSSMEGFEHHRYQNLDAV 3779



 Score = 57.0 bits (118), Expect(9) = 1e-92
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3 / +3

                                      
Query: 447  SHEGQVKKSLSITPLGSDNGYFVNIT 524
            SHEGQVKKSLS+TPLG+D+GYF+NI+
Sbjct: 2181 SHEGQVKKSLSVTPLGNDSGYFLNIS 2258



 Score = 56.5 bits (117), Expect(9) = 1e-92
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3 / +1

                                         
Query: 525  VLNNVQKTNERLSVPVTKAEFAVMRTALS 611
            VLNN+QKT ERLS+P++KAEF VMRTALS
Sbjct: 2893 VLNNLQKTTERLSLPISKAEFTVMRTALS 2979



 Score = 52.4 bits (108), Expect(9) = 1e-92
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3 / +2

                                          
Query: 75   RGVTGLKDALWSGSLTFKHALSTSAANVDE 164
            R VT LKDALWSGSLTF+HALST AA+ ++
Sbjct: 995  RRVTDLKDALWSGSLTFQHALSTFAADGED 1084



 Score = 40.9 bits (83), Expect(9) = 1e-92
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3 / +3

                                 
Query: 606  LSFALPHIMGWDQALSTHPQS 668
            + FALPHI+GWDQAL+ H  S
Sbjct: 3585 VQFALPHILGWDQALTNHQPS 3647



 Score = 26.7 bits (52), Expect(9) = 1e-92
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3 / +2

                          
Query: 30  TMLRLSRFLPSTSTS 74
           TM RLSRF+PS+S S
Sbjct: 71  TMQRLSRFVPSSSRS 115



 Score = 83.1 bits (175), Expect(8) = 2e-72
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3 / -2

                                             
Query: 448  LDFMEGSWKNSQDSAGPRLIKLPTSVGDRAKSC 350
            LDFMEGSWKNSQDSAGPRLIKLPTSVGDRAKSC
Sbjct: 2088 LDFMEGSWKNSQDSAGPRLIKLPTSVGDRAKSC 1990



 Score = 76.7 bits (161), Expect(8) = 2e-72
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3 / -2

                                            
Query: 355  SCFFV*SYFLCPTAGKKVNITDPFLLTRDPPD 260
            +CFF *SYFLCPTAGKKVNITDPFL TRDPPD
Sbjct: 1440 TCFFE*SYFLCPTAGKKVNITDPFLFTRDPPD 1345



 Score = 56.1 bits (116), Expect(8) = 2e-72
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -3 / -3

                                              
Query: 259  SSLVNKGRIGLIESAAFPLNTV*LANFLADAFSS 158
            SSL+  G +G IESAAFPLNTV*LANFL D FS+
Sbjct: 1268 SSLLKLGSMGCIESAAFPLNTV*LANFLPDVFSA 1167



 Score = 51.5 bits (106), Expect(8) = 2e-72
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = -3 / -3

                                         
Query: 610  LNAVRITANSAFVTGTERRSFVFCTLFRT 524
            LNAVRIT NSAF  G+E RS VFC LFRT
Sbjct: 2978 LNAVRITVNSAFEIGSESRSVVFCKLFRT 2892



 Score = 46.0 bits (94), Expect(8) = 2e-72
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = -3 / -1

                                      
Query: 523  VMLTKYPLSLPRGVIDKDFFT*PS*L 446
            ++  KYPLSLPRGV D DFFT PS*L
Sbjct: 2257 LIFRKYPLSLPRGVTDNDFFTWPS*L 2180



 Score = 41.4 bits (84), Expect(8) = 2e-72
 Identities = 20/30 (66%), Positives = 20/30 (66%)
 Frame = -3 / -2

                                          
Query: 163  SSTFAAEVESACLNVNEPLQRASLRPVTPL 74
            SS  AA VE AC  V EPLQRAS R VT L
Sbjct: 1083 SSPSAANVERACWKVKEPLQRASFRSVTLL 994



 Score = 36.3 bits (73), Expect(8) = 2e-72
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2 / -3

                                                       
Query: 809  RIHAFQWRATVVPKALWXXXXXRKASPVPFRIWVWALEPRLAS 681
            + ++ Q    ++ K+L      + ASP P  IWVWAL P LAS
Sbjct: 3785 KCNSIQILVAMMFKSLHAAGAYKGASPFPL*IWVWALHPGLAS 3657



 Score = 31.3 bits (62), Expect(8) = 2e-72
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3 / -1

                        
Query: 649  RAWSQPMMCGNA 614
            +AWSQP MCGNA
Sbjct: 3628 KAWSQPKMCGNA 3593



 Score = 68.0 bits (142), Expect(8) = 1e-47
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2 / +1

                                             
Query: 350  TALCSVTY*SWKLDKSWTC*IL*IFP*SFHEIK 448
            TALCSVTY*S KLDKSW C*IL*IFP*S HEIK
Sbjct: 1990 TALCSVTY*SRKLDKSWAC*IL*IFP*SLHEIK 2088



 Score = 51.0 bits (105), Expect(8) = 1e-47
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +2 / +1

                                           
Query: 260  IWRISSQQKWVSNVDLLPGSWTKEVRLYEET 352
            +WRIS +QKW+ +VD  PG  TKE+ L++ET
Sbjct: 1345 VWRISCEQKWIGDVDFFPGCGTKEI*LFKET 1437



 Score = 48.3 bits (99), Expect(8) = 1e-47
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = +1 / +2

                                          
Query: 523  LF*ITCRRQMNAFQSL*QKLNLQLCARH*V 612
            LF* TCRRQ++ F S  QKL+LQLCA+H*V
Sbjct: 2891 LF*TTCRRQLSDFHSQSQKLSLQLCAQH*V 2980



 Score = 40.5 bits (82), Expect(8) = 1e-47
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +2 / +3

                                           
Query: 164  ECIC*EVCELHCVQGKGCTFNKSYPSFIYQT 256
            E I *++C+LH VQGKGCTF  ++ + + QT
Sbjct: 1173 EHIW*KICKLHRVQGKGCTFYATHTAKLQQT 1265



 Score = 34.5 bits (69), Expect(8) = 1e-47
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1 / +1

                       
Query: 616  HCRTSWAGTRP 648
            HCRTSWAGTRP
Sbjct: 3595 HCRTSWAGTRP 3627



 Score = 33.6 bits (67), Expect(8) = 1e-47
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +2 / +2

                                         
Query: 425  P*SFHEIKS*RSSEEIFVDHSSWQ**WIL 511
            P   H  +S*R SE+I V HSS Q* WIL
Sbjct: 2159 PYPLHFCQS*RPSEKIVVSHSSRQ*QWIL 2245



 Score = 32.2 bits (64), Expect(8) = 1e-47
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2 / +1

                                   
Query: 74   QGSHWPQRCSLERFIDIQACTFD 142
            Q SH P+ CSLE F D   C+F+
Sbjct: 994  QESH*PKGCSLEWFFDFPTCSFN 1062



 Score = 27.6 bits (54), Expect(8) = 1e-47
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1 / +1

                               
Query: 679  QLASLGSSAQTQILNGTGE 735
            QLAS G SA TQI +G GE
Sbjct: 3655 QLASPGWSAHTQIQSGKGE 3711



 Score = 66.1 bits (138), Expect(8) = 2e-44
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -2 / -1

                                            
Query: 446  *FHGRIMEKFTRFSRSKTYQASNFSR*QSKEL 351
            *FHG IMEKFTRFSR KTYQAS+FSR*QSKEL
Sbjct: 2086 *FHGGIMEKFTRFSRPKTYQASDFSR*QSKEL 1991



 Score = 46.0 bits (94), Expect(8) = 2e-44
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -2 / -2

                                          
Query: 611  TQCRAHNCKFSFCYRD*KAFICLLHVIQNS 522
            TQC AHNCK SF   +*K+  CLL V+QNS
Sbjct: 2979 TQCCAHNCKLSF*DWE*KSLSCLLQVVQNS 2890



 Score = 40.0 bits (81), Expect(8) = 2e-44
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2 / -3

                                      
Query: 524  SYVNEVSIITAKRSDRQRFLHLTFMT 447
            +Y+ +VS + A+RSD QRF HL FMT
Sbjct: 2258 TYIQKVSTVIAERSD*QRFFHLAFMT 2181



 Score = 39.6 bits (80), Expect(8) = 2e-44
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = -2 / -1

                                           
Query: 353  LFLRIVVLPLSNCREEGQHY*PISVDSRSSR 261
            LFL I++ PLS+ RE+ QH+  I V +RSSR
Sbjct: 1438 LFL*IIIFPLSHSREKSQHHRSIFVHTRSSR 1346



 Score = 36.8 bits (74), Expect(8) = 2e-44
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2 / -2

                                             
Query: 260  FEFGK*RKDRTY*KCSLSLEHSVARKLLSRCIL 162
            F+F +  +   + KCSLSLEH VA K  +RC+L
Sbjct: 1269 FQFAEAWQYGLHRKCSLSLEHGVACKFSTRCVL 1171



 Score = 36.3 bits (73), Expect(8) = 2e-44
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = -3 / -1

                                        
Query: 781  RWCLKPSGELLRGGKLHLSHSESGFGRS 698
            R C  PS  L+   +LHLSHSESG GRS
Sbjct: 3757 R*CSNPSMLLVPTRELHLSHSESGCGRS 3674



 Score = 31.8 bits (63), Expect(8) = 2e-44
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2 / -1

                                          
Query: 164  LINICS*SRKCMLECQ*TAPESIFEASDSP 75
            +  +C    K MLE Q T PESI   SDSP
Sbjct: 1084 VFTVCCKC*KSMLESQRTTPESIL*VSDSP 995



 Score = 28.1 bits (55), Expect(8) = 2e-44
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -2 / -3

                        
Query: 647  GLVPAHDVRQCK 612
            GLVPA DVRQC+
Sbjct: 3626 GLVPAQDVRQCE 3591



 Score = 73.5 bits (154), Expect(4) = 1e-20
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -1 / -3

                                                      
Query: 447  LISWKDHGKIHKIQQVQDLSSFQLQ*VTEQRAVSSYSRTSFV 322
            LISW+DHGKIHKIQQ QDLSSF+LQ*VTEQRAV   S+ + V
Sbjct: 2087 LISWRDHGKIHKIQQAQDLSSFRLQ*VTEQRAVE*MSQINKV 1962



 Score = 35.9 bits (72), Expect(4) = 1e-20
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -1 / -2

                                 
Query: 510  SIHYHCQEE*STKISSLDLHD 448
            SIH HC+EE* T I SL LHD
Sbjct: 2244 SIHCHCREE*LTTIFSLGLHD 2182



 Score = 31.3 bits (62), Expect(4) = 1e-20
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -1 / -2

                                         
Query: 765  PLASCCEEESFTCPIQNLGLGART*AC*L 679
            P    C + SFT P  NLG+GA   AC*L
Sbjct: 3741 PPCCWCLQGSFTFPTLNLGVGAPPWAC*L 3655



 Score = 26.3 bits (51), Expect(4) = 1e-20
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1 / -2

                         
Query: 645  PGPSP*CAAMQNS 607
            PGPSP CAAM+ +
Sbjct: 3624 PGPSPRCAAMRTA 3586



 Score = 39.1 bits (79), Expect(6) = 3e-15
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +2 / +3

                                          
Query: 521  NCSE*RAEDK*TPFSPCNKS*ICSYAHGIE 610
            +CSE  AED *  F+P  KS*+ SYAH IE
Sbjct: 2889 SCSEQLAEDN*ATFTPNLKS*VYSYAHSIE 2978



 Score = 34.1 bits (68), Expect(6) = 3e-15
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1 / +3

                                           
Query: 259  NLEDLESTEMGQ*C*PSSRQLDKGSTTIRRN 351
            +LEDL  T+M +*C*  SR  DKG+  I+RN
Sbjct: 1344 SLEDLV*TKMDR*C*LFSRLWDKGNMIIQRN 1436



 Score = 31.3 bits (62), Expect(6) = 3e-15
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1 / +1

                                 
Query: 448  VMKVK*RNLCRSLLLAVIMDT 510
            VMK K*+N C+SLL A+ +DT
Sbjct: 2182 VMKAK*KNRCQSLLSAMTVDT 2244



 Score = 27.2 bits (53), Expect(6) = 3e-15
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2 / +2

                             
Query: 617  IAAHHGLGPGPIHSPSK 667
            IAAH GLGPG   SP+K
Sbjct: 3596 IAAHLGLGPGLD*SPAK 3646



 Score = 26.7 bits (52), Expect(6) = 3e-15
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1 / +2

                       
Query: 190  ATLCSRERLHF 222
            AT CSRERLHF
Sbjct: 1199 ATPCSRERLHF 1231



 Score = 26.7 bits (52), Expect(6) = 3e-15
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2 / +2

                                     
Query: 680  S*QA*VRAPKPRF*MGQVKLSSSQQ 754
            S*QA   AP PRF +G+VKL    Q
Sbjct: 3656 S*QAQGGAPTPRFRVGKVKLPCRHQ 3730



 Score = 34.5 bits (69), Expect = 1.2
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = -1 / -3

                                          
Query: 351  VSSYSRTSFVQLPGRRSTLLTHFC*LEILQ 262
            VS  +  SFV  PG++ST   HFC  EILQ
Sbjct: 1436 VSLNNHISFVPQPGKKSTSPIHFCSHEILQ 1347



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>LOC_Os06g05350:12006.t00424:unspliced-genomic DNA-binding protein p24, putative, expressed|
          Length = 3333

 Score = 53.3 bits (110), Expect(5) = 3e-21
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = +3 / +3

                                        
Query: 351  QLFALSPTEVGSLISLGPAESCEFFHDP 434
            Q+F+LS  E+GSL++LGP +SCEFFHDP
Sbjct: 1014 QVFSLSVWEMGSLLTLGPTDSCEFFHDP 1097



 Score = 43.7 bits (89), Expect(5) = 3e-21
 Identities = 17/34 (50%), Positives = 25/34 (73%)
 Frame = +3 / +2

                                             
Query: 255 LESGGSRVNRNGSVMLTFFPAVGQRKYDYTKKQL 356
           L+SG  +V + G V+L F PAV  R+YD+T+KQ+
Sbjct: 500 LQSGAYKVVKEGFVLLQFAPAVATRQYDWTRKQV 601



 Score = 37.7 bits (76), Expect(5) = 3e-21
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3 / +3

                                           
Query: 171 SAKKFASYTVFKGKAALSISPILPLFTKLESG 266
           + + F++Y+++KGKAA+S+ P  P F  L+ G
Sbjct: 312 NGRVFSTYSIYKGKAAMSLDPRPPQFVPLDVG 407



 Score = 28.1 bits (55), Expect(5) = 3e-21
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3 / +2

                                    
Query: 525  VLNNVQKTNERLSVPVTKAEFAVM 596
            V N +   +E + +P+TK EFAV+
Sbjct: 1898 VQNRLLNIDENIYIPITKGEFAVI 1969



 Score = 24.4 bits (47), Expect(5) = 3e-21
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3 / +3

                       
Query: 606  LSFALPHIMGW 638
            L + +PH+MGW
Sbjct: 2328 LQYIIPHLMGW 2360



 Score = 46.9 bits (96), Expect(3) = 4e-05
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = -3 / -3

                                          
Query: 439  MEGSWKNSQDSAGPRLIKLPTSVGDRAKSC 350
            ++GSWKNSQ+S GPR+ KLP S  D   +C
Sbjct: 1102 LKGSWKNSQESVGPRVSKLPISHTDNENTC 1013



 Score = 23.1 bits (44), Expect(3) = 4e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2 / -3

                                         
Query: 608  QCRAHNCKFSFCYRD*KAFICLLHVIQNS 522
            + R ++ KFSF YRD    I +   + N+
Sbjct: 1981 ESRYNHSKFSFGYRDVNILIDVQETVLNT 1895



 Score = 22.6 bits (43), Expect(3) = 4e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3 / -1

                                           
Query: 355 SCFFV*SYFLCPTAGKKVNITDPFLLTRDPPD 260
           +C  V SY    TAG   + T+P   T   PD
Sbjct: 600 TCLRVQSY*RVATAGANCSSTNPSFTTL*APD 505



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>LOC_Os08g26520:12008.t02418:unspliced-genomic hypothetical protein|
          Length = 6307

 Score = 28.1 bits (55), Expect(3) = 1.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3 / -2

                                            
Query: 771  RHHRSSPLKCVDTWDVKLCFFCDQTRELSLSD 866
            ++HR +   C   W     +FCDQ  ++ L D
Sbjct: 2679 QYHRETFFYCFVGWGTLHTWFCDQGMKIGLGD 2584



 Score = 25.4 bits (49), Expect(3) = 1.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3 / -2

                                    
Query: 642  QALSTHPQSAPTSASKPRFERPNP 713
            ++ ST   SAP SA +P   RP+P
Sbjct: 3039 RSASTSRPSAPPSARRPPSLRPSP 2968



 Score = 24.4 bits (47), Expect(3) = 1.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3 / -1

                                   
Query: 90   LKDALWSGSLTFKHALSTSAANV 158
            L + L SGS T K   STS AN+
Sbjct: 5137 LTEWLCSGSFTHKKNTSTSVANM 5069



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>LOC_Os12g07830:12012.t00665:unspliced-genomic OsAPx5 - Stromal Ascorbate Peroxidase encoding gene, expressed|
          Length = 3490

 Score = 33.6 bits (67), Expect = 2.3
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -2 / +1

                                 
Query: 560  KAFICLLHVIQNSYVNEVSII 498
            K FICLL+V+   YVN VSII
Sbjct: 1546 KIFICLLYVLTPKYVNVVSII 1608



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>LOC_Os03g40560:12003.t03483:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4825

 Score = 33.6 bits (67), Expect = 2.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2 / +1

                                           
Query: 212  GCTFNKSYPSFIYQTRIWRISSQQKWVSNVD 304
            G  +   YPS     RIWR SS   W S VD
Sbjct: 2437 GVDYPSPYPSTDIAPRIWRRSSSSSWPSTVD 2529



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>LOC_Os07g47040:12007.t04340:unspliced-genomic expressed protein|
          Length = 7282

 Score = 33.1 bits (66), Expect = 3.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3 / +1

                                                   
Query: 588 AVMRTALSFALPHIMGWDQALSTHPQSAPTSASKPRFERP 707
           +V   A++F+LP        + +  QSAP+S+S PRF  P
Sbjct: 844 SVKAAAIAFSLPRPSVVPHRVLSSRQSAPSSSSSPRFPSP 963



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>LOC_Os06g38340:12006.t03529:unspliced-genomic receptor-like protein kinase precursor, putative, expressed|
          Length = 3822

 Score = 28.1 bits (55), Expect(2) = 4.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3 / +2

                                   
Query: 336  DYTKKQLFALSPTEVGSLISLGP 404
            D +  +L    P EVGSLI+LGP
Sbjct: 1919 DLSHNRLSGPIPVEVGSLINLGP 1987



 Score = 26.7 bits (52), Expect(2) = 4.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1 / +3

                                
Query: 790  H*NAWIRGMSNCVSFVIKLG 849
            H N  + GM NCV+ ++KLG
Sbjct: 3489 HDNCLMDGMLNCVTKLVKLG 3548



 Score = 29.0 bits (57), Expect(2) = 6.1
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -3 / -1

                        
Query: 403  GPRLIKLPTSVG 368
            GPRLIKLPTS G
Sbjct: 1986 GPRLIKLPTSTG 1951



 Score = 25.4 bits (49), Expect(2) = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2 / -3

                                
Query: 848  PSLITKETQFDIPRIHAFQW 789
            PSL +  TQF IP I    W
Sbjct: 3547 PSLTSFVTQFSIPSIKQLSW 3488



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>LOC_Os09g26330:12009.t02312:unspliced-genomic hypro1, putative|
          Length = 939

 Score = 32.2 bits (64), Expect = 6.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3 / -1

                               
Query: 648 LSTHPQSAPTSASKPRFERP 707
           L  HP  AP +AS+PR ERP
Sbjct: 780 LHVHPVPAPAAASEPRVERP 721



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>LOC_Os09g10840:12009.t00874:unspliced-genomic transcription factor HBP-1b, putative, expressed|
          Length = 11699

 Score = 32.2 bits (64), Expect = 6.1
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -3 / -3

                                                               
Query: 646  AWSQPMMCGNAKLNAVRITANSAFVTGTERRSFVFCTLFRTVMLTKYPLSL 494
            +W+  ++C +  L   R   ++A++  T R   + C LFR     K P+ L
Sbjct: 4461 SWNISLLCSSTHLPYSRSNNDAAYMLITMR*LLIICVLFRNEPAEKLPIIL 4309



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>LOC_Os04g21350:12004.t01868:unspliced-genomic flowering promoting factor-like 1, putative, expressed|
          Length = 890

 Score = 32.2 bits (64), Expect = 6.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3 / -1

                                            
Query: 615 ALPHIMGWDQALSTHPQSAPTSASKPRFERPNP 713
           +LPH+    +ALST P+  P+S S P+   P P
Sbjct: 185 SLPHLHHRHRALSTAPRYLPSSPSHPQTPTPLP 87



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>LOC_Os09g07170:12009.t00513:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 8629

 Score = 32.2 bits (64), Expect = 6.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1 / -3

                                      
Query: 613  LHCRTSWAGTRPYPLTLKAPRPQLAS 690
            L CR  W G R    +L+ PRP+LA+
Sbjct: 7493 LSCRREWGGDRVTVSSLRLPRPRLAA 7416



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>LOC_Os03g56530:12003.t04911:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5659

 Score = 31.8 bits (63), Expect = 8.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3 / -3

                                         
Query: 873  VPEEIEVRMSNCVSLVSVQCTSRFRANLC 959
            +P  + + +S+C+   ++ CT +   NLC
Sbjct: 4202 IPSNLHITISSCIHKAAINCTFQISENLC 4116


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 389,184,486
Number of extensions: 6147881
Number of successful extensions: 18984
Number of sequences better than 10.0: 12
Length of query: 340
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 290
Effective length of database: 52,799,986
Effective search space: 15311995940
Effective search space used: 15311995940
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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