| Clone Name | FLbaf60h16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q03218:MMT1_YEAST Mitochondrial metal transporter 1, mitochondri... | 33 | 2.4 | 2 | Q83C15:SYFB_COXBU Phenylalanyl-tRNA synthetase beta chain - Coxi... | 32 | 4.2 | 3 | P41000:SCP3_SCHPO Protein scp3 - Schizosaccharomyces pombe (Fiss... | 31 | 7.1 | 4 | Q5ZIX8:JHD2A_CHICK JmjC domain-containing histone demethylation ... | 31 | 9.3 |
|---|
>Q03218:MMT1_YEAST Mitochondrial metal transporter 1, mitochondrial precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 510 Score = 32.7 bits (73), Expect = 2.4 Identities = 23/66 (34%), Positives = 30/66 (45%) Frame = -3 Query: 985 RKSSYLKLEQRFALNLEVH*TDTRETQFDILTSISSGTIKSDKDSSLV*SQKKHSLTSHV 806 + Y KL + F + VH ++ Q DI IS GTI+ K S + K SL H Sbjct: 74 KNPQYQKLAEAFNSHDHVHLRESETEQNDI---ISLGTIRDYKSSKCEQADKPSSLNLHS 130 Query: 805 STHFSG 788 TH G Sbjct: 131 HTHSHG 136
>Q83C15:SYFB_COXBU Phenylalanyl-tRNA synthetase beta chain - Coxiella burnetii| Length = 792 Score = 32.0 bits (71), Expect = 4.2 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 9/66 (13%) Frame = +3 Query: 489 LGSDNGY-------FVN--ITVLNNVQKTNERLSVPVTKAEFAVMRTALSFALPHIMGWD 641 L +D GY FVN + L N + T+ LS P+T AE VMRT+L L ++ ++ Sbjct: 500 LMTDRGYHEAVTYSFVNDELQTLLNPEVTSIALSNPLT-AEMNVMRTSLWPGLIQVLKYN 558 Query: 642 QALSTH 659 QA TH Sbjct: 559 QARQTH 564
>P41000:SCP3_SCHPO Protein scp3 - Schizosaccharomyces pombe (Fission yeast)| Length = 583 Score = 31.2 bits (69), Expect = 7.1 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = +3 Query: 855 SLSDFIVPEEIEVRMSNCVSLVSVQCTSRFRANLCSSLR------YDDLRGCP 995 SL + + PEE+E +MS+ VS SRF + + S+L Y+ G P Sbjct: 439 SLQELLTPEELERKMSHGDEAVSSSSASRFMSKVSSNLNSGNPTPYNSYNGTP 491
>Q5ZIX8:JHD2A_CHICK JmjC domain-containing histone demethylation protein 2A - Gallus| gallus (Chicken) Length = 1325 Score = 30.8 bits (68), Expect = 9.3 Identities = 20/66 (30%), Positives = 35/66 (53%) Frame = +3 Query: 426 HDPSMKSSHEGQVKKSLSITPLGSDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTA 605 H+P +K + + S++ +P S + NIT N ++ E+L VP++K E ++T Sbjct: 803 HEPPVKPAAGSKQTASVTTSPSLS---WLSNITSGNVNKENKEKLLVPISKNENKALQTL 859 Query: 606 LSFALP 623 S A P Sbjct: 860 PSLAKP 865 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 166,422,770 Number of extensions: 3521873 Number of successful extensions: 7977 Number of sequences better than 10.0: 4 Number of HSP's gapped: 7973 Number of HSP's successfully gapped: 4 Length of query: 340 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 226 Effective length of database: 69,416,809 Effective search space: 15688198834 Effective search space used: 15688198834 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)