ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf60g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0155800:Os01g0155800 37 0.081
2AK110197: 31 7.6

>Os01g0155800:Os01g0155800 |
          Length = 124
 Score = 37.4 bits (85), Expect = 0.081
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 21  AAAGPFPPSHGKSPP*LRRCV*RAHGSYWCSGQV---FPASAPPVNGGVGGVEHQSSLRI 191
           AA G +PP HG  PP         HG+Y   G V   +P++A P  G      H  S   
Sbjct: 54  AAHGAYPPQHGAYPP--------QHGAYPGHGYVPGAYPSNAAPHGG------HMGSYHT 99

Query: 192 SHGGDG 209
            HGG G
Sbjct: 100 GHGGGG 105



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>AK110197: |
          Length = 1135

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
 Frame = -2

Query: 3742 PHNPHPPITKKD*HPP-HQA*HTGKCPENGHQHHKKLPHY*TRPANQFKKPSFIT----G 3578
            PH+ HPP   +  H   H+  H     E+GH  H    HY   P+      SF T     
Sbjct: 18   PHHSHPPAKHEHDHEHGHEHEH-----EHGHNDHDHSSHYQPPPSYSSSSMSFSTPVRSS 72

Query: 3577 HINQTSMLFEAVRLDACPAAGQIFSAPPLVQRRRAPSIFANSLLT 3443
            H    + L EAV   A  +AG+I   P       + S  +NS +T
Sbjct: 73   HAEAQAAL-EAVA--AAASAGKIQMTPD----HNSSSTGSNSYMT 110


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 104,189,080
Number of extensions: 2340942
Number of successful extensions: 5937
Number of sequences better than 10.0: 2
Number of HSP's gapped: 5920
Number of HSP's successfully gapped: 2
Length of query: 1285
Length of database: 15,399,855
Length adjustment: 112
Effective length of query: 1173
Effective length of database: 10,915,263
Effective search space: 12803603499
Effective search space used: 12803603499
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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