ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf60g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9Y7U5:RGF3_SCHPO Rho1 guanine nucleotide exchange factor 3 - Sc... 35 3.2

>Q9Y7U5:RGF3_SCHPO Rho1 guanine nucleotide exchange factor 3 - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 1275
 Score = 34.7 bits (78), Expect = 3.2
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
 Frame = -1

Query: 485 YQPLAKAPAVETGTSLLTDLSHPPVPSDL-SQSTP*MDAPPVDLRELY------CSPGAY 327
           ++PL + P V  G SL+  L  PP+PS + S S+P        L  LY      CSP  Y
Sbjct: 153 FRPLPETP-VSPGGSLVHPLPRPPLPSSVSSHSSPYSTTSSTSLYSLYNDISLSCSPEPY 211

Query: 326 RGQSPAQG-GDGPHILSVRSTHQFVIRSRKRPSIE 225
              SP +     P  + + S+     +S   PS+E
Sbjct: 212 LPLSPTRSPARTPSPIRLYSSDALRPQSPLSPSVE 246


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 651,306,448
Number of extensions: 14119370
Number of successful extensions: 32723
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32694
Number of HSP's successfully gapped: 1
Length of query: 1285
Length of database: 100,686,439
Length adjustment: 125
Effective length of query: 1160
Effective length of database: 66,399,564
Effective search space: 77023494240
Effective search space used: 77023494240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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