Clone Information

BLAST Search Result

Clone Name	FLbaf60g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001063989.1\| Oryza sativa (japonica cultivar-group) Os06g...	1485	0.0
2	dbj\|AK073960.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	1485	0.0
3	emb\|CT831891.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	1477	0.0
4	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	739	0.0
5	dbj\|AP003524.3\| Oryza sativa (japonica cultivar-group) genomic D...	739	0.0
6	dbj\|AP004007.3\| Oryza sativa (japonica cultivar-group) genomic D...	739	0.0
7	dbj\|AP006709.1\| Lotus japonicus genomic DNA, chromosome 2, clone...	84	2e-12
8	dbj\|AP004528.1\| Lotus japonicus genomic DNA, chromosome 6, clone...	84	2e-12
9	ref\|NM_112479.2\| Arabidopsis thaliana protein binding / ubiquiti...	80	4e-11
10	gb\|DQ059113.1\| Arabidopsis thaliana RING finger family protein (...	80	4e-11
11	dbj\|AK117158.1\| Arabidopsis thaliana At3g16090 mRNA for putative...	80	4e-11
12	emb\|BX822352.1\|CNS0A60E Arabidopsis thaliana Full-length cDNA Co...	80	4e-11
13	emb\|BX824962.1\|CNS0A4QJ Arabidopsis thaliana Full-length cDNA Co...	80	4e-11
14	gb\|AC184097.2\| Populus trichocarpa clone Pop1-88A18, complete se...	78	2e-10
15	gb\|AC183420.2\| Populus trichocarpa clone Pop1-23K9, complete seq...	78	2e-10
16	dbj\|AB012247.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	78	2e-10
17	emb\|BX824326.1\|CNS0A5K1 Arabidopsis thaliana Full-length cDNA Co...	64	2e-06
18	gb\|AC144806.10\| Medicago truncatula clone mth2-34h22, complete s...	52	0.009
19	gb\|AC146575.3\| Medicago truncatula clone mth2-145m4, complete se...	46	0.53
20	emb\|AL939120.1\|SCO939120 Streptomyces coelicolor A3(2) complete ...	46	0.53
21	dbj\|AK228264.1\| Arabidopsis thaliana mRNA for hypothetical prote...	44	2.1
22	ref\|XM_001086872.1\| PREDICTED: Macaca mulatta similar to iroquoi...	44	2.1
23	ref\|XM_001086980.1\| PREDICTED: Macaca mulatta similar to iroquoi...	44	2.1
24	ref\|NM_105178.3\| Arabidopsis thaliana protein binding / ubiquiti...	44	2.1
25	ref\|NM_179512.3\| Arabidopsis thaliana protein binding / ubiquiti...	44	2.1
26	gb\|AC154788.2\| Mus musculus BAC clone RP24-470E2 from chromosome...	44	2.1
27	gb\|AY492248.1\| Corynebacterium confusum strain CIP 105403 RpoB (...	44	2.1
28	gb\|BT013883.1\| Lycopersicon esculentum clone 132864F, mRNA sequence	44	2.1
29	gb\|DQ002407.1\| Zea mays copia retrotransposon opie1, gypsy retro...	44	2.1
30	gb\|AC123693.13\| Mus musculus chromosome 3, clone RP23-326F23, co...	44	2.1
31	gb\|AC108797.8\| Mus musculus chromosome 3, clone RP23-349M18, com...	44	2.1
32	gb\|BT010730.1\| Arabidopsis thaliana At1g65040 gene, complete cds	44	2.1
33	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	2.1
34	dbj\|AB189470.1\| Arabidopsis thaliana At HRD1 mRNA for Hrd1p like...	44	2.1
35	gb\|AC079038.3\|AC079038 Oryza sativa chromosome 7 clone OSJNBb002...	44	2.1
36	gb\|AC009360.3\|F16G16 Arabidopsis thaliana chromosome 1 BAC F16G1...	44	2.1
37	dbj\|AP005895.3\| Oryza sativa (japonica cultivar-group) genomic D...	44	2.1
38	gb\|AC188549.4\| Pan troglodytes BAC clone CH251-267B4 from chromo...	42	8.3
39	gb\|CP000438.1\| Pseudomonas aeruginosa UCBPP-PA14, complete genome	42	8.3
40	gb\|AC189218.1\| Brassica rapa subsp. pekinensis clone KBrB010F13,...	42	8.3
41	gb\|AE004091.2\| Pseudomonas aeruginosa PAO1, complete genome	42	8.3
42	emb\|CT027718.4\| Zebrafish DNA sequence from clone DKEYP-110B2 in...	42	8.3
43	gb\|AC102612.14\| Mus musculus chromosome 9, clone RP23-417D20, co...	42	8.3
44	gb\|AC130528.4\| Mus musculus BAC clone RP23-122M14 from chromosom...	42	8.3
45	gb\|AC110243.9\| Mus musculus chromosome 15, clone RP23-246C6, com...	42	8.3
46	gb\|AE013184.1\| Thermoanaerobacter tengcongensis MB4, section 211...	42	8.3
47	gb\|AC131110.3\| Mus musculus BAC clone RP23-387J23 from chromosom...	42	8.3
48	gb\|AC147070.5\| Homo sapiens chromosome 4 clone RP13-1008F15, com...	42	8.3
49	gb\|AC115948.12\| Mus musculus chromosome 16, clone RP24-568J12, c...	42	8.3
50	gb\|AC147055.2\| Homo sapiens BAC clone RP11-1267H10 from 4, compl...	42	8.3
51	gb\|AC117224.3\| Mus musculus BAC clone RP23-356N8 from chromosome...	42	8.3
52	gb\|AC004540.1\| Homo sapiens PAC clone RP5-1066K24 from 7, comple...	42	8.3
53	gb\|AC118545.20\| Mus musculus strain C57BL/6J clone rp23-324o14 m...	42	8.3
54	gb\|AC122055.4\| Mus musculus BAC clone RP24-465O15 from chromosom...	42	8.3
55	gb\|AC129537.8\| Mus musculus chromosome 15, clone RP23-238H13, co...	42	8.3
56	gb\|AC146142.1\| Pan troglodytes BAC clone RP43-23M11 from 7, comp...	42	8.3
57	gb\|AC124312.5\| Homo sapiens chromosome 15, clone RP11-701H24, co...	42	8.3
58	dbj\|BA000038.2\| Vibrio vulnificus YJ016 DNA, chromosome II, comp...	42	8.3
59	gb\|AC153634.3\| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cance...	42	8.3
60	emb\|CR956431.10\| Pig DNA sequence from clone PigE-60M9 on chromo...	42	8.3
61	gb\|AC009222.4\| Homo sapiens chromosome 17, clone RP11-429O1, com...	42	8.3
62	emb\|Z93929.1\|HS272E8 Human DNA sequence from clone RP1-272E8 on ...	42	8.3
63	emb\|AL049844.7\|HSJ468K18 Human DNA sequence from clone RP3-468K1...	42	8.3
64	gb\|AC068945.7\| Homo sapiens BAC clone RP11-789C1 from 4, complet...	42	8.3
65	gb\|AC007318.4\| Homo sapiens BAC clone RP11-420C9 from 2, complet...	42	8.3
66	gb\|AC024918.5\| Homo sapiens chromosome 17, clone RP11-254J21, co...	42	8.3
67	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	42	8.3
68	gb\|AC078931.9\|AC078931 Mus musculus BAC RP23-419E4 (Roswell Par...	42	8.3
69	emb\|X99645.1\|MMPSASCDS M.musculus 5' flanking sequence of gene e...	42	8.3
70	gb\|AC108486.2\| Homo sapiens chromosome 3 clone RP11-114C6, compl...	42	8.3
71	gb\|AC090602.16\| Homo sapiens chromosome 15, clone RP11-125E1, co...	42	8.3
72	emb\|AJ744953.1\| Populus alba x Populus tremula mRNA for putative...	42	8.3
73	emb\|AJ744952.1\| Populus euphratica mRNA for putative auxin-amido...	42	8.3
74	gb\|AC093557.4\| Homo sapiens chromosome 3 clone RP11-56P22, compl...	42	8.3
75	gb\|AC134921.2\| Homo sapiens BAC clone RP11-597F18 from 4, comple...	42	8.3
76	gb\|AC101658.8\| Mus musculus chromosome 7, clone RP23-470G18, com...	42	8.3
77	gb\|AE016796.1\| Vibrio vulnificus CMCP6 chromosome II, complete s...	42	8.3
78	gb\|AC155284.7\| Mus musculus 6 BAC RP23-241L3 (Roswell Park Cance...	42	8.3
79	gb\|AC174927.2\| Mus musculus BAC clone RP24-325L16 from chromosom...	42	8.3
80	gb\|AC091484.8\| Mus musculus strain C57BL/6J chromosome 17 clone ...	42	8.3
81	gb\|AE017221.1\| Thermus thermophilus HB27, complete genome	42	8.3
82	gb\|AC155279.5\| Mus musculus 6 BAC RP24-85A3 (Roswell Park Cancer...	42	8.3
83	gb\|AC127242.3\| Mus musculus BAC clone RP24-404P19 from 12, compl...	42	8.3
84	ref\|XM_766593.1\| Giardia lamblia ATCC 50803 myosin heavy chain (...	42	8.3
85	emb\|CT030713.5\| Mouse DNA sequence from clone RP24-94C21 on chro...	42	8.3
86	emb\|AL626782.10\| Mouse DNA sequence from clone RP23-335N15 on ch...	42	8.3
87	emb\|AL831790.3\| Mouse DNA sequence from clone RP23-334I5 on chro...	42	8.3
88	gb\|U41384.1\|HSU41384 Human small nuclear ribonuclear protein ass...	42	8.3

>ref|NM_001063989.1| Oryza sativa (japonica cultivar-group) Os06g0301000 (Os06g0301000)
            mRNA, complete cds
          Length = 2131
 Score = 1485 bits (749), Expect = 0.0
 Identities = 1150/1283 (89%), Gaps = 3/1283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 417  ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
            ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 233  ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 292

                                                                        
Query: 477  aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
             ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 293  gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 352

                                                                        
Query: 537  ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
            ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 353  ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 412

                                                                        
Query: 597  cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
            ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 413  cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 472

                                                                        
Query: 657  gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
            ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 473  gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 532

                                                                        
Query: 717  ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
             ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 533  gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 592

                                                                        
Query: 777  gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 593  gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 652

                                                                        
Query: 837  gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
            |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 653  gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 712

                                                                        
Query: 897  gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
            ||| || |||||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 713  gtccaactcgctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 772

                                                                        
Query: 957  ctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagtatgtattcta 1016
             |||||||| ||||||||||||||||| || ||||||||||||||||| ||| |||||||
Sbjct: 773  gtttgagtacatgatactagcaacatccacagtatcgacattcgtgaaatatatattcta 832

                                                                        
Query: 1017 tgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttattt 1076
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 833  tgtcagtgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttactt 892

                                                                        
Query: 1077 ggagcttatcagtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatctt 1136
            |||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 893  ggagctcatcagtgaccttgtacacttgtctttgtatatgctcttcttcatagctatctt 952

                                                                        
Query: 1137 cctgaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaactt 1196
            |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 953  cctgaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaactt 1012

                                                                        
Query: 1197 cagaattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacg 1256
            |||||| || ||  | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1013 cagaatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaag 1072

                                                                        
Query: 1257 ctttccagacgctacaccagatgagcttgatacgagtgatgtcacatgtattatttgccg 1316
             |||||||| || ||| ||||||||||  || |||||||||  |||||||||||||||||
Sbjct: 1073 atttccagatgccacagcagatgagctcaatgcgagtgatgctacatgtattatttgccg 1132

                                                                        
Query: 1317 tgaagagatgaccacagcaaagaagctgctttgtgggcacttgttccatgtacattgttt 1376
            ||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||
Sbjct: 1133 tgaggagatgaccacagcaaaaaagctgctttgtgggcacctgttccatgtccattgttt 1192

                                                                        
Query: 1377 gaggtcatggctagagcgccaacatacttgcccaacatgtagagctccaattatcccccc 1436
            |||||||||| |||| |||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 1193 gaggtcatggttagaacgccaacacacttgccctacatgtagagctccaattctgccccc 1252

                                                                        
Query: 1437 agataatggacgtgcagcatcagcacgacagcatggagctcaacctggagttcagcctgg 1496
            ||||||||| ||| | |   ||||||| | |||||||| ||| |||||||||||||||| 
Sbjct: 1253 agataatgggcgtactg---cagcacgtccgcatggagttcatcctggagttcagcctgt 1309

                                                                        
Query: 1497 tgcaggtgctggtactccaaattcaggaggagcaccaactgagaacgtgaacatgcgtca 1556
            | |||||  ||| || |||  ||||| | ||||| ||  ||||||| | | || ||| ||
Sbjct: 1310 tccaggtaatggcacaccaggttcagaacgagcagcaggtgagaacataagcaggcgcca 1369

                                                                        
Query: 1557 agcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttatcc 1616
            |||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||||
Sbjct: 1370 agcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttatcc 1429

                                                                        
Query: 1617 tccagtgaacactttgaataggcattcaggacctctgcatgctacaccaagtacttcaca 1676
            ||||| ||||| |||||| ||| |||||   ||||  ||  ||||| ||| |  | ||||
Sbjct: 1430 tccagcgaacaatttgaacaggtattcaactcctccacagtctacatcaaatggtccaca 1489

                                   
Query: 1677 atcaggagaagcaagtacttcca 1699
            |||||||||||||||||||||||
Sbjct: 1490 atcaggagaagcaagtacttcca 1512



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1773 tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggtgttgca 1832
            ||||| |||||| || |||||||||||||| ||||||| ||||||||||||| |||||||
Sbjct: 1607 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagagatgttgca 1666

                                          
Query: 1833 aatccaattgcaaatgatgcagcaaggggc 1862
            ||||||  |||||||| | ||||| |||||
Sbjct: 1667 aatccagctgcaaatgtttcagcatggggc 1696

to top

>dbj|AK073960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072K04, full
            insert sequence
          Length = 2133

 Score = 1485 bits (749), Expect = 0.0
 Identities = 1150/1283 (89%), Gaps = 3/1283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 417  ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
            ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 235  ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 294

                                                                        
Query: 477  aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
             ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 295  gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 354

                                                                        
Query: 537  ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
            ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 355  ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 414

                                                                        
Query: 597  cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
            ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 415  cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 474

                                                                        
Query: 657  gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
            ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 475  gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 534

                                                                        
Query: 717  ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
             ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 535  gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 594

                                                                        
Query: 777  gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 595  gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 654

                                                                        
Query: 837  gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
            |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 655  gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 714

                                                                        
Query: 897  gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
            ||| || |||||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 715  gtccaactcgctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 774

                                                                        
Query: 957  ctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagtatgtattcta 1016
             |||||||| ||||||||||||||||| || ||||||||||||||||| ||| |||||||
Sbjct: 775  gtttgagtacatgatactagcaacatccacagtatcgacattcgtgaaatatatattcta 834

                                                                        
Query: 1017 tgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttattt 1076
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 835  tgtcagtgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttactt 894

                                                                        
Query: 1077 ggagcttatcagtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatctt 1136
            |||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 895  ggagctcatcagtgaccttgtacacttgtctttgtatatgctcttcttcatagctatctt 954

                                                                        
Query: 1137 cctgaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaactt 1196
            |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 955  cctgaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaactt 1014

                                                                        
Query: 1197 cagaattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacg 1256
            |||||| || ||  | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1015 cagaatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaag 1074

                                                                        
Query: 1257 ctttccagacgctacaccagatgagcttgatacgagtgatgtcacatgtattatttgccg 1316
             |||||||| || ||| ||||||||||  || |||||||||  |||||||||||||||||
Sbjct: 1075 atttccagatgccacagcagatgagctcaatgcgagtgatgctacatgtattatttgccg 1134

                                                                        
Query: 1317 tgaagagatgaccacagcaaagaagctgctttgtgggcacttgttccatgtacattgttt 1376
            ||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||
Sbjct: 1135 tgaggagatgaccacagcaaaaaagctgctttgtgggcacctgttccatgtccattgttt 1194

                                                                        
Query: 1377 gaggtcatggctagagcgccaacatacttgcccaacatgtagagctccaattatcccccc 1436
            |||||||||| |||| |||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 1195 gaggtcatggttagaacgccaacacacttgccctacatgtagagctccaattctgccccc 1254

                                                                        
Query: 1437 agataatggacgtgcagcatcagcacgacagcatggagctcaacctggagttcagcctgg 1496
            ||||||||| ||| | |   ||||||| | |||||||| ||| |||||||||||||||| 
Sbjct: 1255 agataatgggcgtactg---cagcacgtccgcatggagttcatcctggagttcagcctgt 1311

                                                                        
Query: 1497 tgcaggtgctggtactccaaattcaggaggagcaccaactgagaacgtgaacatgcgtca 1556
            | |||||  ||| || |||  ||||| | ||||| ||  ||||||| | | || ||| ||
Sbjct: 1312 tccaggtaatggcacaccaggttcagaacgagcagcaggtgagaacataagcaggcgcca 1371

                                                                        
Query: 1557 agcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttatcc 1616
            |||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||||
Sbjct: 1372 agcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttatcc 1431

                                                                        
Query: 1617 tccagtgaacactttgaataggcattcaggacctctgcatgctacaccaagtacttcaca 1676
            ||||| ||||| |||||| ||| |||||   ||||  ||  ||||| ||| |  | ||||
Sbjct: 1432 tccagcgaacaatttgaacaggtattcaactcctccacagtctacatcaaatggtccaca 1491

                                   
Query: 1677 atcaggagaagcaagtacttcca 1699
            |||||||||||||||||||||||
Sbjct: 1492 atcaggagaagcaagtacttcca 1514



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1773 tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggtgttgca 1832
            ||||| |||||| || |||||||||||||| ||||||| ||||||||||||| |||||||
Sbjct: 1609 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagagatgttgca 1668

                                          
Query: 1833 aatccaattgcaaatgatgcagcaaggggc 1862
            ||||||  |||||||| | ||||| |||||
Sbjct: 1669 aatccagctgcaaatgtttcagcatggggc 1698

to top

>emb|CT831891.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA239H13, full
            insert sequence
          Length = 2174

 Score = 1477 bits (745), Expect = 0.0
 Identities = 1149/1283 (89%), Gaps = 3/1283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 417  ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
            ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 275  ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 334

                                                                        
Query: 477  aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
             ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 335  gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 394

                                                                        
Query: 537  ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
            ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 395  ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 454

                                                                        
Query: 597  cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
            ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 455  cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 514

                                                                        
Query: 657  gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
            ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 515  gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 574

                                                                        
Query: 717  ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
             ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 575  gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 634

                                                                        
Query: 777  gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 635  gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 694

                                                                        
Query: 837  gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
            |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 695  gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 754

                                                                        
Query: 897  gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
            ||| || || ||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 755  gtccaactctctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 814

                                                                        
Query: 957  ctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagtatgtattcta 1016
             |||||||| ||||||||||||||||| || ||||||||||||||||| ||| |||||||
Sbjct: 815  gtttgagtacatgatactagcaacatccacagtatcgacattcgtgaaatatatattcta 874

                                                                        
Query: 1017 tgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttattt 1076
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 875  tgtcagtgacatgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttactt 934

                                                                        
Query: 1077 ggagcttatcagtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatctt 1136
            |||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 935  ggagctcatcagtgaccttgtacacttgtctttgtatatgctcttcttcatagctatctt 994

                                                                        
Query: 1137 cctgaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaactt 1196
            |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 995  cctgaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaactt 1054

                                                                        
Query: 1197 cagaattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacg 1256
            |||||| || ||  | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1055 cagaatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaag 1114

                                                                        
Query: 1257 ctttccagacgctacaccagatgagcttgatacgagtgatgtcacatgtattatttgccg 1316
             |||||||| || ||| ||||||||||  || |||||||||  |||||||||||||||||
Sbjct: 1115 atttccagatgccacagcagatgagctcaatgcgagtgatgctacatgtattatttgccg 1174

                                                                        
Query: 1317 tgaagagatgaccacagcaaagaagctgctttgtgggcacttgttccatgtacattgttt 1376
            ||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||
Sbjct: 1175 tgaggagatgaccacagcaaaaaagctgctttgtgggcacctgttccatgtccattgttt 1234

                                                                        
Query: 1377 gaggtcatggctagagcgccaacatacttgcccaacatgtagagctccaattatcccccc 1436
            |||||||||| |||| |||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 1235 gaggtcatggttagaacgccaacacacttgccctacatgtagagctccaattctgccccc 1294

                                                                        
Query: 1437 agataatggacgtgcagcatcagcacgacagcatggagctcaacctggagttcagcctgg 1496
            ||||||||| ||| | |   ||||||| | |||||||| ||| |||||||||||||||| 
Sbjct: 1295 agataatgggcgtactg---cagcacgtccgcatggagttcatcctggagttcagcctgt 1351

                                                                        
Query: 1497 tgcaggtgctggtactccaaattcaggaggagcaccaactgagaacgtgaacatgcgtca 1556
            | |||||  ||| || |||  ||||| | ||||| ||  ||||||| | | || ||| ||
Sbjct: 1352 tccaggtaatggcacaccaggttcagaacgagcagcaggtgagaacataagcaggcgcca 1411

                                                                        
Query: 1557 agcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttatcc 1616
            |||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||||
Sbjct: 1412 agcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttatcc 1471

                                                                        
Query: 1617 tccagtgaacactttgaataggcattcaggacctctgcatgctacaccaagtacttcaca 1676
            ||||| ||||| |||||| ||| |||||   ||||  ||  ||||| ||| |  | ||||
Sbjct: 1472 tccagcgaacaatttgaacaggtattcaactcctccacagtctacatcaaatggtccaca 1531

                                   
Query: 1677 atcaggagaagcaagtacttcca 1699
            |||||||||||||||||||||||
Sbjct: 1532 atcaggagaagcaagtacttcca 1554



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1773 tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggtgttgca 1832
            ||||| |||||| || |||||||||||||| ||||||| ||||||||||||| |||||||
Sbjct: 1649 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagagatgttgca 1708

                                          
Query: 1833 aatccaattgcaaatgatgcagcaaggggc 1862
            ||||||  |||||||| | ||||| |||||
Sbjct: 1709 aatccagctgcaaatgtttcagcatggggc 1738

to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  739 bits (373), Expect = 0.0
 Identities = 505/549 (91%)
 Strand = Plus / Minus

                                                                            
Query: 417      ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
                ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 11085168 ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 11085109

                                                                            
Query: 477      aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
                 ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 11085108 gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 11085049

                                                                            
Query: 537      ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
                ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11085048 ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 11084989

                                                                            
Query: 597      cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
                ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 11084988 cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 11084929

                                                                            
Query: 657      gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
                ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 11084928 gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 11084869

                                                                            
Query: 717      ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
                 ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 11084868 gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 11084809

                                                                            
Query: 777      gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
                ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 11084808 gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 11084749

                                                                            
Query: 837      gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
                |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 11084748 gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 11084689

                                                                            
Query: 897      gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
                ||| || |||||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 11084688 gtccaactcgctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 11084629

                         
Query: 957      ctttgagta 965
                 ||||||||
Sbjct: 11084628 gtttgagta 11084620



 Score =  266 bits (134), Expect = 3e-67
 Identities = 164/174 (94%)
 Strand = Plus / Minus

                                                                            
Query: 967      atgatactagcaacatcgacggtatcgacattcgtgaagtatgtattctatgtcagcgac 1026
                ||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 11084020 atgatactagcaacatccacagtatcgacattcgtgaaatatatattctatgtcagtgac 11083961

                                                                            
Query: 1027     atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttatttggagcttatc 1086
                ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 11083960 atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttacttggagctcatc 11083901

                                                                      
Query: 1087     agtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatcttcctg 1140
                ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 11083900 agtgaccttgtacacttgtctttgtatatgctcttcttcatagctatcttcctg 11083847



 Score =  236 bits (119), Expect = 3e-58
 Identities = 187/209 (89%), Gaps = 3/209 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1290     gagtgatgtcacatgtattatttgccgtgaagagatgaccacagcaaagaagctgctttg 1349
                ||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 11083541 gagtgatgctacatgtattatttgccgtgaggagatgaccacagcaaaaaagctgctttg 11083482

                                                                            
Query: 1350     tgggcacttgttccatgtacattgtttgaggtcatggctagagcgccaacatacttgccc 1409
                ||||||| |||||||||| |||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 11083481 tgggcacctgttccatgtccattgtttgaggtcatggttagaacgccaacacacttgccc 11083422

                                                                            
Query: 1410     aacatgtagagctccaattatccccccagataatggacgtgcagcatcagcacgacagca 1469
                 |||||||||||||||||| | |||||||||||||| ||| | |   ||||||| | |||
Sbjct: 11083421 tacatgtagagctccaattctgcccccagataatgggcgtactg---cagcacgtccgca 11083365

                                             
Query: 1470     tggagctcaacctggagttcagcctggtg 1498
                ||||| ||| |||||||||||||||||||
Sbjct: 11083364 tggagttcatcctggagttcagcctggtg 11083336



 Score =  182 bits (92), Expect = 4e-42
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1140     gaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaacttcag 1199
                ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 11083765 gaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaacttcag 11083706

                                                                            
Query: 1200     aattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacgctt 1259
                ||| || ||  | |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 11083705 aatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaagatt 11083646

                                        
Query: 1260     tccagacgctacaccagatgagct 1283
                |||||| || ||| ||||||||||
Sbjct: 11083645 tccagatgccacagcagatgagct 11083622



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1555     caagcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttat 1614
                |||||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||
Sbjct: 11083204 caagcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttat 11083145

                                    
Query: 1615     cctccagtgaacactttgaa 1634
                ||||||| ||||| ||||||
Sbjct: 11083144 cctccagcgaacaatttgaa 11083125



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 1773     tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggt 1826
                ||||| |||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 11081690 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagaggt 11081637



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 1673     cacaatcaggagaagcaagtacttcca 1699
                |||||||||||||||||||||||||||
Sbjct: 11081811 cacaatcaggagaagcaagtacttcca 11081785

to top

>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0501G08
          Length = 173505

 Score =  739 bits (373), Expect = 0.0
 Identities = 505/549 (91%)
 Strand = Plus / Minus

                                                                          
Query: 417    ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
              ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 169250 ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 169191

                                                                          
Query: 477    aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
               ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 169190 gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 169131

                                                                          
Query: 537    ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
              ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 169130 ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 169071

                                                                          
Query: 597    cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
              ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 169070 cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 169011

                                                                          
Query: 657    gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
              ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 169010 gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 168951

                                                                          
Query: 717    ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
               ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 168950 gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 168891

                                                                          
Query: 777    gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
              ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 168890 gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 168831

                                                                          
Query: 837    gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
              |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 168830 gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 168771

                                                                          
Query: 897    gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
              ||| || |||||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 168770 gtccaactcgctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 168711

                       
Query: 957    ctttgagta 965
               ||||||||
Sbjct: 168710 gtttgagta 168702



 Score =  266 bits (134), Expect = 3e-67
 Identities = 164/174 (94%)
 Strand = Plus / Minus

                                                                          
Query: 967    atgatactagcaacatcgacggtatcgacattcgtgaagtatgtattctatgtcagcgac 1026
              ||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 168102 atgatactagcaacatccacagtatcgacattcgtgaaatatatattctatgtcagtgac 168043

                                                                          
Query: 1027   atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttatttggagcttatc 1086
              ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 168042 atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttacttggagctcatc 167983

                                                                    
Query: 1087   agtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatcttcctg 1140
              ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 167982 agtgaccttgtacacttgtctttgtatatgctcttcttcatagctatcttcctg 167929



 Score =  236 bits (119), Expect = 3e-58
 Identities = 187/209 (89%), Gaps = 3/209 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1290   gagtgatgtcacatgtattatttgccgtgaagagatgaccacagcaaagaagctgctttg 1349
              ||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 167623 gagtgatgctacatgtattatttgccgtgaggagatgaccacagcaaaaaagctgctttg 167564

                                                                          
Query: 1350   tgggcacttgttccatgtacattgtttgaggtcatggctagagcgccaacatacttgccc 1409
              ||||||| |||||||||| |||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 167563 tgggcacctgttccatgtccattgtttgaggtcatggttagaacgccaacacacttgccc 167504

                                                                          
Query: 1410   aacatgtagagctccaattatccccccagataatggacgtgcagcatcagcacgacagca 1469
               |||||||||||||||||| | |||||||||||||| ||| | |   ||||||| | |||
Sbjct: 167503 tacatgtagagctccaattctgcccccagataatgggcgtactg---cagcacgtccgca 167447

                                           
Query: 1470   tggagctcaacctggagttcagcctggtg 1498
              ||||| ||| |||||||||||||||||||
Sbjct: 167446 tggagttcatcctggagttcagcctggtg 167418



 Score =  182 bits (92), Expect = 4e-42
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1140   gaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaacttcag 1199
              ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 167847 gaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaacttcag 167788

                                                                          
Query: 1200   aattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacgctt 1259
              ||| || ||  | |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 167787 aatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaagatt 167728

                                      
Query: 1260   tccagacgctacaccagatgagct 1283
              |||||| || ||| ||||||||||
Sbjct: 167727 tccagatgccacagcagatgagct 167704



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1555   caagcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttat 1614
              |||||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||
Sbjct: 167286 caagcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttat 167227

                                  
Query: 1615   cctccagtgaacactttgaa 1634
              ||||||| ||||| ||||||
Sbjct: 167226 cctccagcgaacaatttgaa 167207



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 1773   tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggt 1826
              ||||| |||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 165772 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagaggt 165719



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 1673   cacaatcaggagaagcaagtacttcca 1699
              |||||||||||||||||||||||||||
Sbjct: 165893 cacaatcaggagaagcaagtacttcca 165867

to top

>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1217_C01
          Length = 100180

 Score =  739 bits (373), Expect = 0.0
 Identities = 505/549 (91%)
 Strand = Plus / Minus

                                                                         
Query: 417   ggcggcggccgagatgatccggttgcagacgtacgccgcgttcagcctgctggcgacggt 476
             ||||||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||| 
Sbjct: 15074 ggcggcggcggagatgattcggctgcagacgtacgcggcgttcagcctgatggcgacggc 15015

                                                                         
Query: 477   aacgtcggtgtactatgcgttcagcagcagggaacagttctacccggcgatggtctacct 536
              ||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 15014 gacggcggtgtactacgcgttcagcagcagggagcagttctacccggcgatggtgtacct 14955

                                                                         
Query: 537   ctccacctccaagatatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcct 596
             ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 14954 ctccacctccaagatctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgt 14895

                                                                         
Query: 597   cgcctggcagctcgtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcg 656
             ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 14894 cgcctggcagctcgtcaagcggctcttcctggggacgctccgggaggccgaggtggagcg 14835

                                                                         
Query: 657   gctcaacgagcagtcgtggcgggaggttgtggagatcctcttcgcagtcaccatcttccg 716
             ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 14834 gctcaacgagcaggcgtggcgggaggtggtggagatcctcttcgcggtcaccatcttcag 14775

                                                                         
Query: 717   ccaggacttctccgtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctct 776
              ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 14774 gcaggacttctccgtctccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgct 14715

                                                                         
Query: 777   gcactggctcgcgcagaagagggtcgagtacattgagaccacgccctccgtgccaatgct 836
             ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 14714 gcactggctcgcgcagaagagggtcgagtacatcgagaccacgccctccgtgcccatgct 14655

                                                                         
Query: 837   gtcgcacataaggatcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcct 896
             |||||||   |||||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 14654 gtcgcacgccaggatcgtctccttcatgctgttcctgctcgtcgtcgactgcctcttcct 14595

                                                                         
Query: 897   gtcgaattcgctggggtcactgatacaaaagcgggaggcatctgttgcaatcttcttttc 956
             ||| || |||||  |||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 14594 gtccaactcgctcaggtcgctcatacacaagcgggaggcgtctgttgcaatcttcttttc 14535

                      
Query: 957   ctttgagta 965
              ||||||||
Sbjct: 14534 gtttgagta 14526



 Score =  266 bits (134), Expect = 3e-67
 Identities = 164/174 (94%)
 Strand = Plus / Minus

                                                                         
Query: 967   atgatactagcaacatcgacggtatcgacattcgtgaagtatgtattctatgtcagcgac 1026
             ||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||| |||
Sbjct: 13926 atgatactagcaacatccacagtatcgacattcgtgaaatatatattctatgtcagtgac 13867

                                                                         
Query: 1027  atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttatttggagcttatc 1086
             ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 13866 atgctaatggaaggtcaatgggagaaaaaggcagtgtatacattttacttggagctcatc 13807

                                                                   
Query: 1087  agtgaccttgtgcacttgtctttatatatgctcttcttcatagcgatcttcctg 1140
             ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 13806 agtgaccttgtacacttgtctttgtatatgctcttcttcatagctatcttcctg 13753



 Score =  236 bits (119), Expect = 3e-58
 Identities = 187/209 (89%), Gaps = 3/209 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1290  gagtgatgtcacatgtattatttgccgtgaagagatgaccacagcaaagaagctgctttg 1349
             ||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 13447 gagtgatgctacatgtattatttgccgtgaggagatgaccacagcaaaaaagctgctttg 13388

                                                                         
Query: 1350  tgggcacttgttccatgtacattgtttgaggtcatggctagagcgccaacatacttgccc 1409
             ||||||| |||||||||| |||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 13387 tgggcacctgttccatgtccattgtttgaggtcatggttagaacgccaacacacttgccc 13328

                                                                         
Query: 1410  aacatgtagagctccaattatccccccagataatggacgtgcagcatcagcacgacagca 1469
              |||||||||||||||||| | |||||||||||||| ||| | |   ||||||| | |||
Sbjct: 13327 tacatgtagagctccaattctgcccccagataatgggcgtactg---cagcacgtccgca 13271

                                          
Query: 1470  tggagctcaacctggagttcagcctggtg 1498
             ||||| ||| |||||||||||||||||||
Sbjct: 13270 tggagttcatcctggagttcagcctggtg 13242



 Score =  182 bits (92), Expect = 4e-42
 Identities = 131/144 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1140  gaactatggtgtcccactgcacttgattcgtgagctgtatgagaccttccgcaacttcag 1199
             ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 13671 gaactatggtgtcccactgcacttgatacgtgagctgtatgagacatttcgcaacttcag 13612

                                                                         
Query: 1200  aattcgcatttcagattatgtacgctacagaaagataacttccaacatgaatgaacgctt 1259
             ||| || ||  | |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 13611 aatccgtatcgcggattatgtacgctacagaaagataacttccaacatgaatgaaagatt 13552

                                     
Query: 1260  tccagacgctacaccagatgagct 1283
             |||||| || ||| ||||||||||
Sbjct: 13551 tccagatgccacagcagatgagct 13528



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1555  caagcaaaacttgaggctgctgcttcagctgcttccttgtatgggagatcatttgcttat 1614
             |||||||||||||| || |||||||| ||||||||| | ||||||||||| |||||||||
Sbjct: 13110 caagcaaaacttgaagcagctgcttcggctgcttccctatatgggagatcctttgcttat 13051

                                 
Query: 1615  cctccagtgaacactttgaa 1634
             ||||||| ||||| ||||||
Sbjct: 13050 cctccagcgaacaatttgaa 13031



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 1773  tgaaaattcactacaaaaggcatatgaaaaggctataaggagccagatagaggt 1826
             ||||| |||||| || |||||||||||||| ||||||| |||||||||||||||
Sbjct: 11596 tgaaagttcactgcagaaggcatatgaaaatgctataaagagccagatagaggt 11543



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 1673  cacaatcaggagaagcaagtacttcca 1699
             |||||||||||||||||||||||||||
Sbjct: 11717 cacaatcaggagaagcaagtacttcca 11691

to top

>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592,
             complete sequence
          Length = 96561

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                         
Query: 637   cgggaggccgaggtcgagcggctcaacgagcagtcgtggcgggaggttgtggagatcctc 696
             |||||||| ||||||||| |||| || |||||||||||| |||||||| |||| ||||||
Sbjct: 14028 cgggaggcggaggtcgagaggcttaatgagcagtcgtggagggaggttatggaaatcctc 14087

                                                                         
Query: 697   ttcgcagtcaccatcttccgccaggacttctccgtctctttcctcgccatggtcgccgcc 756
             || ||  | || || ||||| ||||||||||| ||  | ||||| ||||||||  |||| 
Sbjct: 14088 tttgccattactattttccggcaggacttctcggttacgttccttgccatggttaccgcg 14147

                                                                         
Query: 757   ctgctcctcgtcaaggctctgcactggctcgcgcagaagagggtcgagtacattgagacc 816
             ||| |  |  | |||||| |||| ||| | || |||||||| ||||||||||| ||||||
Sbjct: 14148 ctgttgttgattaaggctttgcattggttggctcagaagagagtcgagtacatcgagacc 14207

               
Query: 817   ac 818
             ||
Sbjct: 14208 ac 14209



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 1231  aagataacttccaacatgaatgaacgctttccagacgctacaccagatgagctt 1284
             ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||||
Sbjct: 15904 aagatcacttcaaatatgaatgatcgctttccagatgccacacctgaagagctt 15957



 Score = 42.1 bits (21), Expect = 8.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 511   cagttctacccggcgatggtctacctctccacctccaagat 551
             |||||||| ||||||||||| || ||||| || ||||||||
Sbjct: 13902 cagttctatccggcgatggtgtatctctcgacttccaagat 13942

to top

>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b,
             complete sequence
          Length = 77452

 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                         
Query: 637   cgggaggccgaggtcgagcggctcaacgagcagtcgtggcgggaggttgtggagatcctc 696
             |||||||| ||||| ||| |||| || |||||||||||| |||||||| |||| ||||||
Sbjct: 24598 cgggaggcggaggttgagaggcttaatgagcagtcgtggagggaggttatggaaatcctc 24539

                                                                         
Query: 697   ttcgcagtcaccatcttccgccaggacttctccgtctctttcctcgccatggtcgccgcc 756
             || ||  | || || ||||| ||||||||||| ||  | ||||| ||||||||| |||| 
Sbjct: 24538 tttgccattactattttccggcaggacttctcggttacgttccttgccatggtcaccgcg 24479

                                                                         
Query: 757   ctgctcctcgtcaaggctctgcactggctcgcgcagaagagggtcgagtacattgagacc 816
             ||| |  |  | |||||| |||| ||| | || |||||||| ||||||||||| ||||||
Sbjct: 24478 ctgttattgattaaggctttgcattggttggcacagaagagagtcgagtacatcgagacc 24419

               
Query: 817   ac 818
             ||
Sbjct: 24418 ac 24417



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 1231  aagataacttccaacatgaatgaacgctttccagacgctacaccagatgagctt 1284
             ||||| ||||| || |||||||| ||||||||||| || ||||| || ||||||
Sbjct: 22749 aagatcacttcaaatatgaatgatcgctttccagatgccacacctgaagagctt 22696

to top

>ref|NM_112479.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding (AT3G16090) mRNA, complete cds
          Length = 2120

 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 947  tcttcttttcctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagt 1006
            ||||||| || || |||||||||||||| || ||| |||| ||  | |  || |||||||
Sbjct: 887  tcttcttctcattcgagtatatgatactggcgacaacgactgttgctatttttgtgaagt 946

                                                                        
Query: 1007 atgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtata 1066
            |||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| ||||
Sbjct: 947  atgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtttata 1006

                                        
Query: 1067 cattttatttggagcttatcagtgacct 1094
            | || ||| | ||||||||| |||||||
Sbjct: 1007 ctttctatcttgagcttatccgtgacct 1034



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1231 agtgatgccacatgtatcatatgccgtgaagagatgac 1268

to top

>gb|DQ059113.1| Arabidopsis thaliana RING finger family protein (At3g16090) mRNA,
            complete cds
          Length = 1479

 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 947  tcttcttttcctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagt 1006
            ||||||| || || |||||||||||||| || ||| |||| ||  | |  || |||||||
Sbjct: 518  tcttcttctcattcgagtatatgatactggcgacaacgactgttgctatttttgtgaagt 577

                                                                        
Query: 1007 atgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtata 1066
            |||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| ||||
Sbjct: 578  atgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtttata 637

                                        
Query: 1067 cattttatttggagcttatcagtgacct 1094
            | || ||| | ||||||||| |||||||
Sbjct: 638  ctttctatcttgagcttatccgtgacct 665



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            ||||||| ||||||||| || |||||||||||||||||
Sbjct: 862  agtgatgccacatgtatcatatgccgtgaagagatgac 899

to top

>dbj|AK117158.1| Arabidopsis thaliana At3g16090 mRNA for putative zinc finger protein,
            complete cds, clone: RAFL16-70-A12
          Length = 2019

 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 947  tcttcttttcctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagt 1006
            ||||||| || || |||||||||||||| || ||| |||| ||  | |  || |||||||
Sbjct: 819  tcttcttctcattcgagtatatgatactggcgacaacgactgttgctatttttgtgaagt 878

                                                                        
Query: 1007 atgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtata 1066
            |||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| ||||
Sbjct: 879  atgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtttata 938

                                        
Query: 1067 cattttatttggagcttatcagtgacct 1094
            | || ||| | ||||||||| |||||||
Sbjct: 939  ctttctatcttgagcttatccgtgacct 966



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1163 agtgatgccacatgtatcatatgccgtgaagagatgac 1200

to top

>emb|BX822352.1|CNS0A60E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB30ZB05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1996

 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 947  tcttcttttcctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagt 1006
            ||||||| || || |||||||||||||| || ||| |||| ||  | |  || |||||||
Sbjct: 830  tcttcttctcattcgagtatatgatactggcgacaacgactgttgctatttttgtgaagt 889

                                                                        
Query: 1007 atgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtata 1066
            |||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| ||||
Sbjct: 890  atgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtttata 949

                                        
Query: 1067 cattttatttggagcttatcagtgacct 1094
            | || ||| | ||||||||| |||||||
Sbjct: 950  ctttctatcttgagcttatccgtgacct 977



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1174 agtgatgccacatgtatcatatgccgtgaagagatgac 1211

to top

>emb|BX824962.1|CNS0A4QJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH85ZH01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2043

 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 947  tcttcttttcctttgagtatatgatactagcaacatcgacggtatcgacattcgtgaagt 1006
            ||||||| || || |||||||||||||| || ||| |||| ||  | |  || |||||||
Sbjct: 844  tcttcttctcattcgagtatatgatactggcgacaacgactgttgctatttttgtgaagt 903

                                                                        
Query: 1007 atgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtgtata 1066
            |||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| ||||
Sbjct: 904  atgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtttata 963

                                        
Query: 1067 cattttatttggagcttatcagtgacct 1094
            | || ||| | ||||||||| |||||||
Sbjct: 964  ctttctatcttgagcttatccgtgacct 991



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1188 agtgatgccacatgtatcatatgccgtgaagagatgac 1225

to top

>gb|AC184097.2| Populus trichocarpa clone Pop1-88A18, complete sequence
          Length = 96720

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1303 tgtattatttgccgtgaagagatgaccacagcaaagaagctgctttgtgggcacttgttc 1362
            ||||||||||| |||||||||||||||||||| |||||| |  | ||||| ||  | || 
Sbjct: 243  tgtattatttgtcgtgaagagatgaccacagccaagaagttattatgtggacatcttttt 184

                                                                       
Query: 1363 catgtacattgtttgaggtcatggctagagcgccaacatacttgcccaacatgtagagc 1421
            ||||| |||||| || | |||||| | ||||| |||||||||||||| ||||| |||||
Sbjct: 183  catgttcattgtctgcgttcatggttggagcgacaacatacttgccctacatgcagagc 125

to top

>gb|AC183420.2| Populus trichocarpa clone Pop1-23K9, complete sequence
          Length = 145826

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 99/119 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1303  tgtattatttgccgtgaagagatgaccacagcaaagaagctgctttgtgggcacttgttc 1362
             ||||||||||| |||||||||||||||||||| |||||| |  | ||||| ||  | || 
Sbjct: 91853 tgtattatttgtcgtgaagagatgaccacagccaagaagttattatgtggacatcttttt 91912

                                                                        
Query: 1363  catgtacattgtttgaggtcatggctagagcgccaacatacttgcccaacatgtagagc 1421
             ||||| |||||| || | |||||| | ||||| |||||||||||||| ||||| |||||
Sbjct: 91913 catgttcattgtctgcgttcatggttggagcgacaacatacttgccctacatgcagagc 91971

to top

>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1
          Length = 79355

 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1000  gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggca 1059
             ||||||||||| ||||||||||  || ||| ||||||| |||||||||||||| ||| ||
Sbjct: 49391 gtgaagtatgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagcca 49450

                                                
Query: 1060  gtgtatacattttatttggagcttatcagtgacct 1094
             || ||||| || ||| | ||||||||| |||||||
Sbjct: 49451 gtttatactttctatcttgagcttatccgtgacct 49485



 Score = 52.0 bits (26), Expect = 0.009
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 1291  agtgatgtcacatgtattatttgccgtgaagagatgac 1328
             ||||||| ||||||||| || |||||||||||||||||
Sbjct: 49975 agtgatgccacatgtatcatatgccgtgaagagatgac 50012

to top

>emb|BX824326.1|CNS0A5K1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH3ZF08 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2009

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1003 aagtatgtattctatgtcagcgacatgctaatggaaggtcaatgggagaaaaaggcagtg 1062
            |||||||| ||||||||||  || ||| ||||||| |||||||||||||| ||| |||| 
Sbjct: 873  aagtatgttttctatgtcactgatatgttaatggatggtcaatgggagaagaagccagtt 932

                                    
Query: 1063 tatacattttatttggagcttatc 1086
            ||||| || ||| | |||||||||
Sbjct: 933  tatactttctatcttgagcttatc 956



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 1291 agtgatgtcacatgtattatttgccgtgaagagatgac 1328
            |||||||  |||||||| || |||||||||||||||||
Sbjct: 1161 agtgatgctacatgtatcatatgccgtgaagagatgac 1198

to top

>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence
          Length = 124550

 Score = 52.0 bits (26), Expect = 0.009
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1192  aacttcagaattcgcatttcagattatgtacgctacagaaagataacttccaacatgaat 1251
             ||||||| | |||| |||||||||||| |||| ||  | ||||| ||||| |||||||||
Sbjct: 92868 aacttcaaagttcgtatttcagattatctacgttatcgtaagatcacttctaacatgaat 92927

                           
Query: 1252  gaacgctttccaga 1265
             || || ||||||||
Sbjct: 92928 gatcggtttccaga 92941



 Score = 46.1 bits (23), Expect = 0.53
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                         
Query: 967   atgatactagcaacatcgacggtatcgacattcgtgaagtatgtattctatgtcagcgac 1026
             ||||||||||||||| | || ||||| |  || || || ||| | ||||||||||| |||
Sbjct: 91734 atgatactagcaacaacaacagtatccatttttgtaaaatatattttctatgtcagtgac 91793

                                    
Query: 1027  atgctaatggaaggtcaatggga 1049
             ||||| ||||| || ||||||||
Sbjct: 91794 atgcttatggaggggcaatggga 91816



 Score = 44.1 bits (22), Expect = 2.1
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 637   cgggaggccgaggtcgagcggctcaacgagcagtcgtggcgggaggttgtggagatcctc 696
             |||||||||||||| ||| |||| || |||||  | ||| |||||||| |||| ||||||
Sbjct: 91035 cgggaggccgaggttgagaggcttaatgagcaagcatggagggaggttatggaaatcctc 91094

               
Query: 697   tt 698
             ||
Sbjct: 91095 tt 91096



 Score = 42.1 bits (21), Expect = 8.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1381  tcatggctagagcgccaacatacttgccc 1409
             |||||||||||||| || |||||||||||
Sbjct: 93142 tcatggctagagcggcagcatacttgccc 93170

to top

>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 640    gaggccgaggtcgagcggctcaacgagcagtcgtggcgggaggttgtggagatcctctt 698
              ||||| ||||| ||| |||| || ||||| || ||| |||||||| |||||||||||||
Sbjct: 102828 gaggctgaggttgagaggcttaatgagcaatcatggagggaggttatggagatcctctt 102770



 Score = 42.1 bits (21), Expect = 8.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1381   tcatggctagagcgccaacatacttgccc 1409
              |||||||||||||| ||||| ||||||||
Sbjct: 101353 tcatggctagagcgacaacacacttgccc 101325

to top

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 46.1 bits (23), Expect = 0.53
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 746    tggtcgccgccctgctcctcgtc 768
              |||||||||||||||||||||||
Sbjct: 135017 tggtcgccgccctgctcctcgtc 135039

to top

>dbj|AK228264.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL14-72-A14
          Length = 1729

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 685  gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 734

to top

>ref|XM_001086872.1| PREDICTED: Macaca mulatta similar to iroquois homeobox protein 5,
            transcript variant 1 (LOC697968), mRNA
          Length = 2234

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 192  ctccgccgccgcccccggcggtgctc 217
            ||||||||||||| ||||||||||||
Sbjct: 1137 ctccgccgccgcctccggcggtgctc 1162

to top

>ref|XM_001086980.1| PREDICTED: Macaca mulatta similar to iroquois homeobox protein 5,
           transcript variant 2 (LOC697968), mRNA
          Length = 2059

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 ctccgccgccgcccccggcggtgctc 217
           ||||||||||||| ||||||||||||
Sbjct: 962 ctccgccgccgcctccggcggtgctc 987

to top

>ref|NM_105178.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding (AT1G65040) mRNA, complete cds
          Length = 1517

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 472  gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 521

to top

>ref|NM_179512.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding (AT1G65040) mRNA, complete cds
          Length = 1790

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 707  gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 756

to top

>gb|AC154788.2| Mus musculus BAC clone RP24-470E2 from chromosome 13, complete
            sequence
          Length = 158761

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1556 aagcaaaacttgaggctgctgc 1577
            ||||||||||||||||||||||
Sbjct: 6522 aagcaaaacttgaggctgctgc 6501

to top

>gb|AY492248.1| Corynebacterium confusum strain CIP 105403 RpoB (rpoB) gene,
           partial cds
          Length = 3356

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 450 cgccgcgttcagcctgctggcg 471
           ||||||||||||||||||||||
Sbjct: 174 cgccgcgttcagcctgctggcg 153

to top

>gb|BT013883.1| Lycopersicon esculentum clone 132864F, mRNA sequence
          Length = 1514

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1837 caattgcaaatgatgcagcaag 1858
            ||||||||||||||||||||||
Sbjct: 795  caattgcaaatgatgcagcaag 774

to top

>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1,
             xilon1 retrotransposon, helitron B73_14578, gypsy
             retrotransposon huck1 and ruda retrotransposon, complete
             sequence
          Length = 152384

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1568  aggctgctgcttcagctgcttc 1589
             ||||||||||||||||||||||
Sbjct: 33632 aggctgctgcttcagctgcttc 33653

to top

>gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, complete sequence
          Length = 225242

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 1041   tcaatgggagaaaaaggcagtgtatacatt 1070
              ||||||||| |||| |||||||||||||||
Sbjct: 208380 tcaatgggataaaatggcagtgtatacatt 208409

to top

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 1041  tcaatgggagaaaaaggcagtgtatacatt 1070
             ||||||||| |||| |||||||||||||||
Sbjct: 20755 tcaatgggataaaatggcagtgtatacatt 20784

to top

>gb|BT010730.1| Arabidopsis thaliana At1g65040 gene, complete cds
          Length = 1383

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 571  gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 620

to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 1460     cacgacagcatggagctcaacctgga 1485
                |||||||||||| |||||||||||||
Sbjct: 25004776 cacgacagcatgcagctcaacctgga 25004801

to top

>dbj|AB189470.1| Arabidopsis thaliana At HRD1 mRNA for Hrd1p like protein, complete
            cds
          Length = 1730

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 685  gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 734

to top

>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence
          Length = 129838

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1460  cacgacagcatggagctcaacctgga 1485
             |||||||||||| |||||||||||||
Sbjct: 84377 cacgacagcatgcagctcaacctgga 84352

to top

>gb|AC009360.3|F16G16 Arabidopsis thaliana chromosome 1 BAC F16G16 sequence, complete
            sequence
          Length = 28334

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 1000 gtgaagtatgtattctatgtcagcgacatgctaatggaaggtcaatggga 1049
            ||||||||||  ||||||||||  || ||||| | |||||||||||||||
Sbjct: 7245 gtgaagtatgccttctatgtcactgatatgctcaaggaaggtcaatggga 7196

to top

>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018L13
          Length = 131155

 Score = 44.1 bits (22), Expect = 2.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1460  cacgacagcatggagctcaacctgga 1485
             |||||||||||| |||||||||||||
Sbjct: 45456 cacgacagcatgcagctcaacctgga 45481

to top

>gb|AC188549.4| Pan troglodytes BAC clone CH251-267B4 from chromosome 7, complete
             sequence
          Length = 157856

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    ccttcctcctccccacacccc 59
             |||||||||||||||||||||
Sbjct: 31812 ccttcctcctccccacacccc 31832

to top

>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
          Length = 6537648

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1860   ggccaccaccacatcggcaac 1880
              |||||||||||||||||||||
Sbjct: 910040 ggccaccaccacatcggcaac 910060

to top

>gb|AC189218.1| Brassica rapa subsp. pekinensis clone KBrB010F13, complete sequence
          Length = 128976

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 766   gtcaaggctctgcactggctcgcgcagaagagggtcgagtacattgagaccac 818
             ||||||||| | || ||||| || |||||||| || || ||||||||||||||
Sbjct: 88101 gtcaaggctttacattggcttgcacagaagagagttgaatacattgagaccac 88153

to top

>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
          Length = 6264404

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1860    ggccaccaccacatcggcaac 1880
               |||||||||||||||||||||
Sbjct: 4617816 ggccaccaccacatcggcaac 4617796

to top

>emb|CT027718.4| Zebrafish DNA sequence from clone DKEYP-110B2 in linkage group 15,
             complete sequence
          Length = 39604

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1357  ttgttccatgtacattgtttg 1377
             |||||||||||||||||||||
Sbjct: 20960 ttgttccatgtacattgtttg 20940

to top

>gb|AC102612.14| Mus musculus chromosome 9, clone RP23-417D20, complete sequence
          Length = 202804

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 162905 ggtcaatgggagaaaaaggca 162925

to top

>gb|AC130528.4| Mus musculus BAC clone RP23-122M14 from chromosome 6, complete sequence
          Length = 208738

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 36709 ggtcaatgggagaaaaaggca 36689

to top

>gb|AC110243.9| Mus musculus chromosome 15, clone RP23-246C6, complete sequence
          Length = 179988

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 87261 ggtcaatgggagaaaaaggca 87281

to top

>gb|AE013184.1| Thermoanaerobacter tengcongensis MB4, section 211 of 244 of the
            complete genome
          Length = 10343

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 942  tgcaatcttcttttcctttga 962
            |||||||||||||||||||||
Sbjct: 4697 tgcaatcttcttttcctttga 4717

to top

>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence
          Length = 205463

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 185811 ggtcaatgggagaaaaaggca 185791

to top

>gb|AC147070.5| Homo sapiens chromosome 4 clone RP13-1008F15, complete sequence
          Length = 153296

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 695    tcttcgcagtcaccatcttcc 715
              |||||||||||||||||||||
Sbjct: 131966 tcttcgcagtcaccatcttcc 131946

to top

>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence
          Length = 212604

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     cctccttcctcctccccacacccca 60
              ||||||||||| |||||||||||||
Sbjct: 205998 cctccttcctcttccccacacccca 205974

to top

>gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, complete sequence
          Length = 184963

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 695   tcttcgcagtcaccatcttcc 715
             |||||||||||||||||||||
Sbjct: 35290 tcttcgcagtcaccatcttcc 35310

to top

>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence
          Length = 197831

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 36     cctccttcctcctccccacacccca 60
              ||||||||||| |||||||||||||
Sbjct: 123879 cctccttcctcttccccacacccca 123903

to top

>gb|AC004540.1| Homo sapiens PAC clone RP5-1066K24 from 7, complete sequence
          Length = 131757

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    ccttcctcctccccacacccc 59
             |||||||||||||||||||||
Sbjct: 77897 ccttcctcctccccacacccc 77877

to top

>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence
          Length = 236365

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     tccttcctcctccccacaccc 58
              |||||||||||||||||||||
Sbjct: 175807 tccttcctcctccccacaccc 175787

to top

>gb|AC122055.4| Mus musculus BAC clone RP24-465O15 from chromosome 17, complete
             sequence
          Length = 159138

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1136  tcctgaactatggtgtcccactgca 1160
             |||||||||||||| ||||||||||
Sbjct: 87363 tcctgaactatggtttcccactgca 87387

to top

>gb|AC129537.8| Mus musculus chromosome 15, clone RP23-238H13, complete sequence
          Length = 215416

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 18216 ggtcaatgggagaaaaaggca 18196

to top

>gb|AC146142.1| Pan troglodytes BAC clone RP43-23M11 from 7, complete sequence
          Length = 173557

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    ccttcctcctccccacacccc 59
             |||||||||||||||||||||
Sbjct: 44771 ccttcctcctccccacacccc 44751

to top

>gb|AC124312.5| Homo sapiens chromosome 15, clone RP11-701H24, complete sequence
          Length = 181639

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     ttcctcctccccacaccccat 61
              |||||||||||||||||||||
Sbjct: 167978 ttcctcctccccacaccccat 167958

to top

>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 1841    tgcaaatgatgcagcaaggggccaccacc 1869
               ||||||||| |||||||||||||| ||||
Sbjct: 1842613 tgcaaatgaagcagcaaggggccatcacc 1842585

to top

>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190237

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 97757 ggtcaatgggagaaaaaggca 97777

to top

>emb|CR956431.10| Pig DNA sequence from clone PigE-60M9 on chromosome 7, complete
             sequence
          Length = 206517

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    cttcctcctccccacacccca 60
             |||||||||||||||||||||
Sbjct: 78939 cttcctcctccccacacccca 78959

to top

>gb|AC009222.4| Homo sapiens chromosome 17, clone RP11-429O1, complete sequence
          Length = 184304

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 952   ttttcctttgagtatatgata 972
             |||||||||||||||||||||
Sbjct: 53779 ttttcctttgagtatatgata 53759

to top

>emb|Z93929.1|HS272E8 Human DNA sequence from clone RP1-272E8 on chromosome Xp22.13-22.31
             Contains a pseudogene similar to MDM2-Like P53-binding
             protein, the 5' end of the RAI2 gene for retinoic acid
             induced 2 and one CpG island, complete sequence
          Length = 117968

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 1094  ttgtgcacttgtctttatatatgctcttcttca 1126
             |||||||||||||||||| |||| | |||||||
Sbjct: 64376 ttgtgcacttgtctttatgtatgttattcttca 64344

to top

>emb|AL049844.7|HSJ468K18 Human DNA sequence from clone RP3-468K18 on chromosome 6q24.1-24.3
              Contains part of the gene for a novel protein (contains
              KIAA0680), the gene for a novel protein (similar to
              nucleolin) (contains FLJ14909), the gene for a novel
              protein similar to a  hypothetical mouse protein, and part
              of the PLAGL1 gene for pleiomorphic adenoma gene-like 1
              (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor). Contains a
              CpG island, complete sequence
          Length = 137387

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 949    ttcttttcctttgagtatatg 969
              |||||||||||||||||||||
Sbjct: 109584 ttcttttcctttgagtatatg 109604

to top

>gb|AC068945.7| Homo sapiens BAC clone RP11-789C1 from 4, complete sequence
          Length = 219476

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 949    ttcttttcctttgagtatatg 969
              |||||||||||||||||||||
Sbjct: 127256 ttcttttcctttgagtatatg 127236

to top

>gb|AC007318.4| Homo sapiens BAC clone RP11-420C9 from 2, complete sequence
          Length = 204230

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1330   acagcaaagaagctgctttgt 1350
              |||||||||||||||||||||
Sbjct: 174579 acagcaaagaagctgctttgt 174559

to top

>gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, complete sequence
          Length = 172784

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 952    ttttcctttgagtatatgata 972
              |||||||||||||||||||||
Sbjct: 130742 ttttcctttgagtatatgata 130722

to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 419     cggcggccgagatgatccggt 439
               |||||||||||||||||||||
Sbjct: 7716631 cggcggccgagatgatccggt 7716651

to top

>gb|AC078931.9|AC078931 Mus musculus  BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 188750

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 56310 ggtcaatgggagaaaaaggca 56330

to top

>emb|X99645.1|MMPSASCDS M.musculus 5' flanking sequence of gene encoding polysialic acid
            synthase
          Length = 1822

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1371 ttgtttgaggtcatggctaga 1391
            |||||||||||||||||||||
Sbjct: 1020 ttgtttgaggtcatggctaga 1000

to top

>gb|AC108486.2| Homo sapiens chromosome 3 clone RP11-114C6, complete sequence
          Length = 157904

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1329  cacagcaaagaagctgctttg 1349
             |||||||||||||||||||||
Sbjct: 42049 cacagcaaagaagctgctttg 42069

to top

>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence
          Length = 174707

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     ttcctcctccccacaccccat 61
              |||||||||||||||||||||
Sbjct: 156857 ttcctcctccccacaccccat 156877

to top

>emb|AJ744953.1| Populus alba x Populus tremula mRNA for putative auxin-amidohydrolase
            precursor (Ill3 gene)
          Length = 1508

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1838 aattgcaaatgatgcagcaag 1858
            |||||||||||||||||||||
Sbjct: 844  aattgcaaatgatgcagcaag 824

to top

>emb|AJ744952.1| Populus euphratica mRNA for putative auxin-amidohydrolase precursor
            (Ill3 gene)
          Length = 1462

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1838 aattgcaaatgatgcagcaag 1858
            |||||||||||||||||||||
Sbjct: 808  aattgcaaatgatgcagcaag 788

to top

>gb|AC093557.4| Homo sapiens chromosome 3 clone RP11-56P22, complete sequence
          Length = 149941

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1329  cacagcaaagaagctgctttg 1349
             |||||||||||||||||||||
Sbjct: 95218 cacagcaaagaagctgctttg 95238

to top

>gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, complete sequence
          Length = 96776

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 695   tcttcgcagtcaccatcttcc 715
             |||||||||||||||||||||
Sbjct: 43292 tcttcgcagtcaccatcttcc 43312

to top

>gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1371  ttgtttgaggtcatggctaga 1391
             |||||||||||||||||||||
Sbjct: 31441 ttgtttgaggtcatggctaga 31421

to top

>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 1841    tgcaaatgatgcagcaaggggccaccacc 1869
               ||||||||| |||||||||||||| ||||
Sbjct: 1258297 tgcaaatgaagcagcaaggggccatcacc 1258269

to top

>gb|AC155284.7| Mus musculus 6 BAC RP23-241L3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205924

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 131674 ggtcaatgggagaaaaaggca 131694

to top

>gb|AC174927.2| Mus musculus BAC clone RP24-325L16 from chromosome 9, complete sequence
          Length = 195951

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 123386 ggtcaatgggagaaaaaggca 123366

to top

>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete
             sequence
          Length = 205343

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    tccttcctcctccccacaccc 58
             |||||||||||||||||||||
Sbjct: 69817 tccttcctcctccccacaccc 69797

to top

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 746   tggtcgccgccctgctcctcg 766
             |||||||||||||||||||||
Sbjct: 83769 tggtcgccgccctgctcctcg 83749

to top

>gb|AC155279.5| Mus musculus 6 BAC RP24-85A3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 201663

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 20136 ggtcaatgggagaaaaaggca 20156

to top

>gb|AC127242.3| Mus musculus BAC clone RP24-404P19 from 12, complete sequence
          Length = 171990

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1039  ggtcaatgggagaaaaaggca 1059
             |||||||||||||||||||||
Sbjct: 55568 ggtcaatgggagaaaaaggca 55588

to top

>ref|XM_766593.1| Giardia lamblia ATCC 50803 myosin heavy chain (GLP_623_52896_49111)
            partial mRNA
          Length = 3786

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1573 gctgcttcagctgcttccttg 1593
            |||||||||||||||||||||
Sbjct: 3362 gctgcttcagctgcttccttg 3342

to top

>emb|CT030713.5| Mouse DNA sequence from clone RP24-94C21 on chromosome 17, complete
              sequence
          Length = 190764

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 138545 ggtcaatgggagaaaaaggca 138565

to top

>emb|AL626782.10| Mouse DNA sequence from clone RP23-335N15 on chromosome X, complete
              sequence
          Length = 177264

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1039   ggtcaatgggagaaaaaggca 1059
              |||||||||||||||||||||
Sbjct: 126413 ggtcaatgggagaaaaaggca 126393

to top

>emb|AL831790.3| Mouse DNA sequence from clone RP23-334I5 on chromosome 4, complete
              sequence
          Length = 206074

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1336   aagaagctgctttgtgggcacttgt 1360
              |||||| ||||||||||||||||||
Sbjct: 107400 aagaaggtgctttgtgggcacttgt 107376

to top

>gb|U41384.1|HSU41384 Human small nuclear ribonuclear protein associated polypeptide N
             (SNRPN) gene and Prader-willi syndrome gene, complete
             sequence
          Length = 35882

 Score = 42.1 bits (21), Expect = 8.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    ttcctcctccccacaccccat 61
             |||||||||||||||||||||
Sbjct: 32596 ttcctcctccccacaccccat 32576


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 370,000,144
Number of extensions: 20082341
Number of successful extensions: 121678
Number of sequences better than 10.0: 88
Number of HSP's gapped: 121660
Number of HSP's successfully gapped: 127
Length of query: 2170
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2147
Effective length of database: 18,503,978,556
Effective search space: 39728041959732
Effective search space used: 39728041959732
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result