ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56n15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os06g0664500:Os06g0664500 | 31 | 0.87 | 2 | Os08g0475200:Os08g0475200 | 29 | 3.3 | 3 | Os05g0399400:Os05g0399400 | 28 | 5.7 | 4 | AK111287:Os01g0508300 | 28 | 7.4 | 5 | AK106547:Os08g0101500 | 28 | 7.4 | 6 | AK105025:Os03g0684000 | 28 | 7.4 | 7 | AK103792:Os08g0101500 | 28 | 7.4 | 8 | AK101435:Os01g0508300 | 28 | 7.4 | 9 | AK120569:Os03g0184300 | 28 | 9.7 | 10 | AK120004:Os04g0492900 | 28 | 9.7 |
|---|
>Os06g0664500:Os06g0664500 | Length = 252 Score = 31.2 bits (69), Expect = 0.87 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 115 WRAPRVRHGAQTSSGRPRHRQRWWR 189 WR RH A ++SGR R R+R WR Sbjct: 91 WRLLHPRHAAASASGRERARRRRWR 115
>Os08g0475200:Os08g0475200 | Length = 347 Score = 29.3 bits (64), Expect = 3.3 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +1 Query: 1 ERHASNRRRL----RATKLIQAVCSHGAAGEGKRDRRHGCPAWRAPRVRHGAQTSSGRPR 168 +RHA++RR RA + + + GA ++ RR PA R PRVR P Sbjct: 123 QRHAADRRAAAVLPRAHREVVRDVAAGAVPGHEQARR--VPAPREPRVRAALHVGGHPPE 180 Query: 169 HRQR 180 HR R Sbjct: 181 HRPR 184
>Os05g0399400:Os05g0399400 | Length = 334 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 108 ATVPSISLAFACCSMAAHGLYQLCGTQAASVTC 10 AT +++L A +MAA + + CG+QA C Sbjct: 3 ATTTAVALLVAAAAMAAQVVAEQCGSQAGGALC 35
>AK111287:Os01g0508300 | Length = 102 Score = 28.1 bits (61), Expect = 7.4 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 Query: 16 NRRRLRATKLIQAVCSHGAAGEGKRDRRHGCPAWRAPR 129 +RRR +K+ A G G+G RR G P WR R Sbjct: 54 SRRRWGISKVACAQQPRGGEGKGTPRRRMGKPVWRRRR 91
>AK106547:Os08g0101500 | Length = 477 Score = 28.1 bits (61), Expect = 7.4 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +1 Query: 76 GEGKRDRRHGCPAWRAP-RVRHGAQTSSGRPRHRQRWWRH 192 G G+ +RRHG P P R GA ++G PRH R RH Sbjct: 45 GVGRGERRHGRPRDVHPHRAVAGAVPAAG-PRHHPRLHRH 83
>AK105025:Os03g0684000 | Length = 319 Score = 28.1 bits (61), Expect = 7.4 Identities = 19/73 (26%), Positives = 29/73 (39%) Frame = +2 Query: 77 AKASEIDGTVAQRGAPRELDTAHKHRVGDHDIVSAGGGMKKLQEEEDKEKTAAEGVKPLP 256 A A+ D R AP + GD+D G ++ +EE+D E+ E + P Sbjct: 7 AAAAAQDADAVMRDAPADAAAGG----GDNDDDDGDDGTEEDEEEDDDEEGDEEELPPAE 62 Query: 257 HKQVPQPSDVYNP 295 P+P P Sbjct: 63 DPAAPEPVSALLP 75
>AK103792:Os08g0101500 | Length = 475 Score = 28.1 bits (61), Expect = 7.4 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +1 Query: 76 GEGKRDRRHGCPAWRAP-RVRHGAQTSSGRPRHRQRWWRH 192 G G+ +RRHG P P R GA ++G PRH R RH Sbjct: 43 GVGRGERRHGRPRDVHPHRAVAGAVPAAG-PRHHPRLHRH 81
>AK101435:Os01g0508300 | Length = 102 Score = 28.1 bits (61), Expect = 7.4 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 Query: 16 NRRRLRATKLIQAVCSHGAAGEGKRDRRHGCPAWRAPR 129 +RRR +K+ A G G+G RR G P WR R Sbjct: 54 SRRRWGISKVACAQQPRGGEGKGTPRRRMGKPVWRRRR 91
>AK120569:Os03g0184300 | Length = 623 Score = 27.7 bits (60), Expect = 9.7 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +1 Query: 7 HASNRRRL---RATKLIQAVCSHGAAGEGKRDRRHGCPAWRAPRVRHGA 144 H + RR +A ++ V GA G G R+ G P PRV HGA Sbjct: 8 HGGDGRRRGGRQAVVVVVVVAGGGAEGGGHREAERGVPRLLLPRV-HGA 55
>AK120004:Os04g0492900 | Length = 172 Score = 27.7 bits (60), Expect = 9.7 Identities = 22/53 (41%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Frame = +1 Query: 16 NRRRLRATKLIQAVCSHGAAGEGK--RDRRHGCPAWRAPRVRHGAQTSSGRPR 168 N RR A CSH AA R RRHG P AP R A G PR Sbjct: 2 NARRRETPCDCSAGCSHAAAPPHLLGRPRRHGVPEATAPPPRREA---GGSPR 51 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,536,770 Number of extensions: 468770 Number of successful extensions: 1600 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1600 Number of HSP's successfully gapped: 10 Length of query: 267 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 168 Effective length of database: 11,435,796 Effective search space: 1921213728 Effective search space used: 1921213728 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
