| Clone Name | FLbaf56m17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071718:Os03g0722000 | 30 | 3.7 | 2 | Os08g0411900:Os08g0411900 | 30 | 3.7 | 3 | AK072386:Os09g0100800 | 30 | 3.7 | 4 | AK110198: | 29 | 6.4 | 5 | AK066368:Os10g0182000 | 28 | 8.3 |
|---|
>AK071718:Os03g0722000 | Length = 337 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -3 Query: 746 ASDHPAPACLPLGGDAAALVGR-QRSGPSTGRDTLRQW 636 ++D PA A L G A A+VGR +R G G D L +W Sbjct: 34 SADDPANALLHDAGVARAVVGRLRREGSGAGNDGLCRW 71
>Os08g0411900:Os08g0411900 | Length = 959 Score = 29.6 bits (65), Expect = 3.7 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 11/107 (10%) Frame = -2 Query: 648 LTTVAVMSRSWERIRESLF------HGFKLVKEVSFCAPVDVSCKIRLGPTLKESAHKNE 487 L T + WER++ S+F H ++VK + F + D+ +++ L S + + Sbjct: 389 LATKPATKQEWERVKNSIFCVLERDHEMEVVKRILFLSYYDLPDYLKV-CLLDLSRYPED 447 Query: 486 SIY*CREAILRG-----RGGREAAPLEDVRYPLLGNVLARTRTMLVQ 361 + C I R G++ LE+V ++ R LVQ Sbjct: 448 FLIKCEHMIWRWIAEGFISGKQGQNLEEVGERYFNELINRNMVQLVQ 494
>AK072386:Os09g0100800 | Length = 397 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +1 Query: 598 AFPYPFPASGHDRHCRKVSRPVLGPDRC--RPTSAAASPPNGKQ 723 A P P P DR +K S PV P+R + T+ PP+ KQ Sbjct: 34 ALPLPLPPP--DRKRKKASEPVNSPERAKKKKTATPHEPPSAKQ 75
>AK110198: | Length = 961 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = +1 Query: 634 RHCRKVSRPVLGPDRCRPT----SAAASPPNGKQAGAG*SEARTR 756 +H RKVS VL P R RPT +SPP G S +RTR Sbjct: 918 QHHRKVSHQVLSPPRNRPTPPTIKVVSSPPAAGATAHGVS-SRTR 961
>AK066368:Os10g0182000 | Length = 999 Score = 28.5 bits (62), Expect = 8.3 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 389 RTFPSSGYLTSSSGAASLPPRPRSIAS 469 R P++ YLTSSS AA+ P P ++A+ Sbjct: 23 RVLPAAIYLTSSSSAAASAPAPPAMAA 49 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,158,117 Number of extensions: 658018 Number of successful extensions: 1798 Number of sequences better than 10.0: 5 Number of HSP's gapped: 1793 Number of HSP's successfully gapped: 5 Length of query: 352 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 250 Effective length of database: 11,315,673 Effective search space: 2828918250 Effective search space used: 2828918250 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)