| Clone Name | FLbaf56m17 |
|---|---|
| Clone Library Name | barley_pub |
>P21438:MYC_FLVTT Viral myc transforming protein - Feline leukemia virus FTT| Length = 437 Score = 34.7 bits (78), Expect = 0.68 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P G E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPKPLGLHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEEEEEIDVVSVEKR 270
>Q29031:MYC_PIG Myc proto-oncogene protein - Sus scrofa (Pig)| Length = 439 Score = 34.3 bits (77), Expect = 0.89 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P G E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRGSPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>Q9MZT7:MYC_TADBR Myc proto-oncogene protein - Tadarida brasiliensis (Brazilian| free-tailed bat) Length = 439 Score = 33.9 bits (76), Expect = 1.2 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+AAS P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAASSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>Q9MZT8:MYC_PTEHP Myc proto-oncogene protein - Pteropus hypomelanus (Island flying| fox) (Variable flying fox) Length = 440 Score = 32.7 bits (73), Expect = 2.6 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+AAS P E + D Sbjct: 196 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAASSPRASPEPLVLHEETPPTTSSDSEE 255 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 256 EQEDEEEIDVVSVEKR 271
>P68272:MYC_FLV Viral myc transforming protein - Feline leukemia virus| Length = 439 Score = 32.3 bits (72), Expect = 3.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEEEEEIDVVSVEKR 270
>P68271:MYC_FELCA Myc proto-oncogene protein - Felis silvestris catus (Cat)| Length = 439 Score = 32.3 bits (72), Expect = 3.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEEEEEIDVVSVEKR 270
>Q28566:MYC_SHEEP Myc proto-oncogene protein - Ovis aries (Sheep)| Length = 439 Score = 32.0 bits (71), Expect = 4.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>P01106:MYC_HUMAN Myc proto-oncogene protein - Homo sapiens (Human)| Length = 439 Score = 32.0 bits (71), Expect = 4.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+ S P G E + D Sbjct: 195 FPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>Q28350:MYC_CANFA Myc proto-oncogene protein - Canis familiaris (Dog)| Length = 439 Score = 32.0 bits (71), Expect = 4.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>Q2HJ27:MYC_BOVIN Myc proto-oncogene protein - Bos taurus (Bovine)| Length = 439 Score = 32.0 bits (71), Expect = 4.4 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+A S P E + D Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>P23583:MYC_PANTR Myc proto-oncogene protein - Pan troglodytes (Chimpanzee)| Length = 439 Score = 31.6 bits (70), Expect = 5.7 Identities = 20/76 (26%), Positives = 27/76 (35%) Frame = +1 Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780 FPYP S + C P S+ S P G E + D Sbjct: 195 FPYPLNDSSSPKSCPSQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEE 254 Query: 781 EQEASSIIDVMSDQQK 828 EQE IDV+S +++ Sbjct: 255 EQEDEEEIDVVSVEKR 270
>Q9BQ92:TTY7_HUMAN Transcript Y 7 protein - Homo sapiens (Human)| Length = 124 Score = 31.2 bits (69), Expect = 7.5 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +3 Query: 870 VIMHLLGPSVVHLH---L*NYFIMHLLGLEPLCVEQSVDD 980 + H LGP + H + +++ HLLGLEP V +S DD Sbjct: 33 IATHTLGPRIKSQHDGGVPPHYVKHLLGLEPNSVMKSQDD 72
>P87366:OPSG_ORYLA Green-sensitive opsin - Oryzias latipes (Medaka fish) (Japanese| ricefish) Length = 345 Score = 30.8 bits (68), Expect = 9.8 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = +2 Query: 782 NKKLHLSLMLCLINKNL------CFSFNIC*TMLMCDYALVGPFCCTSALIELFYYALVG 943 NKKL L L+N + CF F +C M Y +GP CT IE F L G Sbjct: 66 NKKLRQPLNFILVNLAVAGLIMVCFGFTVCIYSCMVGYFSLGPLGCT---IEGFMATLGG 122 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 169,899,942 Number of extensions: 3514224 Number of successful extensions: 7739 Number of sequences better than 10.0: 13 Number of HSP's gapped: 7732 Number of HSP's successfully gapped: 13 Length of query: 352 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 238 Effective length of database: 69,416,809 Effective search space: 16521200542 Effective search space used: 16521200542 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)