ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56m17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P21438:MYC_FLVTT Viral myc transforming protein - Feline leukemi... 35 0.68
2Q29031:MYC_PIG Myc proto-oncogene protein - Sus scrofa (Pig) 34 0.89
3Q9MZT7:MYC_TADBR Myc proto-oncogene protein - Tadarida brasilien... 34 1.2
4Q9MZT8:MYC_PTEHP Myc proto-oncogene protein - Pteropus hypomelan... 33 2.6
5P68272:MYC_FLV Viral myc transforming protein - Feline leukemia ... 32 3.4
6P68271:MYC_FELCA Myc proto-oncogene protein - Felis silvestris c... 32 3.4
7Q28566:MYC_SHEEP Myc proto-oncogene protein - Ovis aries (Sheep) 32 4.4
8P01106:MYC_HUMAN Myc proto-oncogene protein - Homo sapiens (Human) 32 4.4
9Q28350:MYC_CANFA Myc proto-oncogene protein - Canis familiaris (... 32 4.4
10Q2HJ27:MYC_BOVIN Myc proto-oncogene protein - Bos taurus (Bovine) 32 4.4
11P23583:MYC_PANTR Myc proto-oncogene protein - Pan troglodytes (C... 32 5.7
12Q9BQ92:TTY7_HUMAN Transcript Y 7 protein - Homo sapiens (Human) 31 7.5
13P87366:OPSG_ORYLA Green-sensitive opsin - Oryzias latipes (Medak... 31 9.8

>P21438:MYC_FLVTT Viral myc transforming protein - Feline leukemia virus FTT|
          Length = 437
 Score = 34.7 bits (78), Expect = 0.68
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P       G  E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPKPLGLHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEEEEEIDVVSVEKR 270



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>Q29031:MYC_PIG Myc proto-oncogene protein - Sus scrofa (Pig)|
          Length = 439

 Score = 34.3 bits (77), Expect = 0.89
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P G        E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRGSPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>Q9MZT7:MYC_TADBR Myc proto-oncogene protein - Tadarida brasiliensis (Brazilian|
           free-tailed bat)
          Length = 439

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+AAS P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAASSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>Q9MZT8:MYC_PTEHP Myc proto-oncogene protein - Pteropus hypomelanus (Island flying|
           fox) (Variable flying fox)
          Length = 440

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 21/76 (27%), Positives = 28/76 (36%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+AAS P          E    +   D   
Sbjct: 196 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAASSPRASPEPLVLHEETPPTTSSDSEE 255

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 256 EQEDEEEIDVVSVEKR 271



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>P68272:MYC_FLV Viral myc transforming protein - Feline leukemia virus|
          Length = 439

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEEEEEIDVVSVEKR 270



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>P68271:MYC_FELCA Myc proto-oncogene protein - Felis silvestris catus (Cat)|
          Length = 439

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEEEEEIDVVSVEKR 270



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>Q28566:MYC_SHEEP Myc proto-oncogene protein - Ovis aries (Sheep)|
          Length = 439

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>P01106:MYC_HUMAN Myc proto-oncogene protein - Homo sapiens (Human)|
          Length = 439

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+  S P G        E    +   D   
Sbjct: 195 FPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>Q28350:MYC_CANFA Myc proto-oncogene protein - Canis familiaris (Dog)|
          Length = 439

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSAAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>Q2HJ27:MYC_BOVIN Myc proto-oncogene protein - Bos taurus (Bovine)|
          Length = 439

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+A S P          E    +   D   
Sbjct: 195 FPYPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRASPEPLALHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>P23583:MYC_PANTR Myc proto-oncogene protein - Pan troglodytes (Chimpanzee)|
          Length = 439

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 20/76 (26%), Positives = 27/76 (35%)
 Frame = +1

Query: 601 FPYPFPASGHDRHCRKVSRPVLGPDRCRPTSAAASPPNGKQAGAG*SEARTRSRGQDMRR 780
           FPYP   S   + C         P      S+  S P G        E    +   D   
Sbjct: 195 FPYPLNDSSSPKSCPSQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEETPPTTSSDSEE 254

Query: 781 EQEASSIIDVMSDQQK 828
           EQE    IDV+S +++
Sbjct: 255 EQEDEEEIDVVSVEKR 270



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>Q9BQ92:TTY7_HUMAN Transcript Y 7 protein - Homo sapiens (Human)|
          Length = 124

 Score = 31.2 bits (69), Expect = 7.5
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +3

Query: 870 VIMHLLGPSVVHLH---L*NYFIMHLLGLEPLCVEQSVDD 980
           +  H LGP +   H   +  +++ HLLGLEP  V +S DD
Sbjct: 33  IATHTLGPRIKSQHDGGVPPHYVKHLLGLEPNSVMKSQDD 72



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>P87366:OPSG_ORYLA Green-sensitive opsin - Oryzias latipes (Medaka fish) (Japanese|
           ricefish)
          Length = 345

 Score = 30.8 bits (68), Expect = 9.8
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +2

Query: 782 NKKLHLSLMLCLINKNL------CFSFNIC*TMLMCDYALVGPFCCTSALIELFYYALVG 943
           NKKL   L   L+N  +      CF F +C    M  Y  +GP  CT   IE F   L G
Sbjct: 66  NKKLRQPLNFILVNLAVAGLIMVCFGFTVCIYSCMVGYFSLGPLGCT---IEGFMATLGG 122


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 169,899,942
Number of extensions: 3514224
Number of successful extensions: 7739
Number of sequences better than 10.0: 13
Number of HSP's gapped: 7732
Number of HSP's successfully gapped: 13
Length of query: 352
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 238
Effective length of database: 69,416,809
Effective search space: 16521200542
Effective search space used: 16521200542
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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