ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC102484.7| Mus musculus chromosome 1, clone RP24-455F18, com... 44 1.0
2ref|XM_455973.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F19888g ... 44 1.0
3gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, comp... 44 1.0
4gb|AC159974.7| Mus musculus chromosome 1, clone RP24-266D16, com... 44 1.0
5gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, comp... 44 1.0
6gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, co... 44 1.0
7emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 44 1.0
8gb|AC186174.2| Gallus gallus BAC clone CH261-92O14 from chromoso... 42 4.0
9gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 4.0
10ref|XM_588934.2| PREDICTED: Bos taurus similar to Zinc finger pr... 42 4.0
11ref|XM_872705.1| PREDICTED: Bos taurus similar to Zinc finger pr... 42 4.0
12ref|XM_545644.2| PREDICTED: Canis familiaris similar to Zinc fin... 42 4.0
13gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome... 42 4.0
14gb|AC061709.25| Homo sapiens 12 BAC RP11-417O18 (Roswell Park Ca... 42 4.0
15gb|AC023595.19| Homo sapiens 12 BAC RP11-553N19 (Roswell Park Ca... 42 4.0
16gb|AC110489.7| Homo sapiens 3 BAC RP11-324N13 (Roswell Park Canc... 42 4.0
17gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence 42 4.0
18gb|AC146966.3| Bos taurus clone RP42-139G14, complete sequence 42 4.0
19emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chro... 42 4.0
20dbj|AP003966.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 4.0 
>gb|AC102484.7| Mus musculus chromosome 1, clone RP24-455F18, complete sequence
          Length = 150669
 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 718  aagcaagctggagcaggatgatctga 743
            ||||| ||||||||||||||||||||
Sbjct: 8861 aagcaggctggagcaggatgatctga 8836
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>ref|XM_455973.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F19888g predicted mRNA
          Length = 14748

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 574  gaccagtttgaagccatgaaat 595
            ||||||||||||||||||||||
Sbjct: 5929 gaccagtttgaagccatgaaat 5950
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>gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, complete sequence
          Length = 182353

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 718    aagcaagctggagcaggatgatctga 743
              ||||| ||||||||||||||||||||
Sbjct: 112413 aagcaggctggagcaggatgatctga 112438
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>gb|AC159974.7| Mus musculus chromosome 1, clone RP24-266D16, complete sequence
          Length = 158901

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 776    ggagggaacaagaagcttcatc 797
              ||||||||||||||||||||||
Sbjct: 114670 ggagggaacaagaagcttcatc 114691
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>gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, complete sequence
          Length = 173791

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 19     ccatgcacccatctctatccctctct 44
              |||||||||||||||| |||||||||
Sbjct: 147050 ccatgcacccatctctctccctctct 147075
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>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence
          Length = 180896

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 782    aacaagaagcttcatctatcat 803
              ||||||||||||||||||||||
Sbjct: 151024 aacaagaagcttcatctatcat 151003
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 574     gaccagtttgaagccatgaaat 595
               ||||||||||||||||||||||
Sbjct: 1848501 gaccagtttgaagccatgaaat 1848480
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>gb|AC186174.2| Gallus gallus BAC clone CH261-92O14 from chromosome z, complete sequence
          Length = 218793

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 782    aacaagaagcttcatctatca 802
              |||||||||||||||||||||
Sbjct: 163172 aacaagaagcttcatctatca 163192
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 197    caagcgcgtgaccgaatcgtg 217
              |||||||||||||||||||||
Sbjct: 329902 caagcgcgtgaccgaatcgtg 329882
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>ref|XM_588934.2| PREDICTED: Bos taurus similar to Zinc finger protein 142 (HA4654),
            transcript variant 1 (LOC511573), mRNA
          Length = 5367

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  cttctgtgacttctccaccac 164
            |||||||||||||||||||||
Sbjct: 3462 cttctgtgacttctccaccac 3482
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>ref|XM_872705.1| PREDICTED: Bos taurus similar to Zinc finger protein 142 (HA4654),
            transcript variant 2 (LOC511573), mRNA
          Length = 5469

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  cttctgtgacttctccaccac 164
            |||||||||||||||||||||
Sbjct: 3564 cttctgtgacttctccaccac 3584
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>ref|XM_545644.2| PREDICTED: Canis familiaris similar to Zinc finger protein 142
            (HA4654) (LOC488524), mRNA
          Length = 6537

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  cttctgtgacttctccaccac 164
            |||||||||||||||||||||
Sbjct: 4212 cttctgtgacttctccaccac 4232
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>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 122    ccatcctccactccccctgcttctt 146
              ||||||||| |||||||||||||||
Sbjct: 110076 ccatcctcccctccccctgcttctt 110100
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>gb|AC061709.25| Homo sapiens 12 BAC RP11-417O18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 208524

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 152924 cccatctctatccctctctcc 152944



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 152976 cccatctctatccctctctcc 152996



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 153018 cccatctctatccctctctcc 153038



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 153060 cccatctctatccctctctcc 153080



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 153102 cccatctctatccctctctcc 153122



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 153186 cccatctctatccctctctcc 153206



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 153270 cccatctctatccctctctcc 153290
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>gb|AC023595.19| Homo sapiens 12 BAC RP11-553N19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161578

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135546 cccatctctatccctctctcc 135526



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135630 cccatctctatccctctctcc 135610



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135714 cccatctctatccctctctcc 135694



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135840 cccatctctatccctctctcc 135820



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135884 cccatctctatccctctctcc 135864



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     cccatctctatccctctctcc 46
              |||||||||||||||||||||
Sbjct: 135926 cccatctctatccctctctcc 135906
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>gb|AC110489.7| Homo sapiens 3 BAC RP11-324N13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 19236

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 809   ttatgtctgatcaacaaaaacttgtgctt 837
             ||||||||||||||| || ||||||||||
Sbjct: 14478 ttatgtctgatcaaccaacacttgtgctt 14450
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>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence
          Length = 153415

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1017  tatatacagctaatttgaaat 1037
             |||||||||||||||||||||
Sbjct: 49221 tatatacagctaatttgaaat 49201
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>gb|AC146966.3| Bos taurus clone RP42-139G14, complete sequence
          Length = 179474

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1017   tatatacagctaatttgaaat 1037
              |||||||||||||||||||||
Sbjct: 160906 tatatacagctaatttgaaat 160886
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>emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chromosome 4, complete
              sequence
          Length = 216190

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    gcgacaccccataggtacatg 258
              |||||||||||||||||||||
Sbjct: 202432 gcgacaccccataggtacatg 202452
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>dbj|AP003966.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2508F7, complete
             sequence
          Length = 97000

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 599   ctttcccttatcctttcccagcttctgga 627
             |||||||||| ||||||||||||||||||
Sbjct: 36114 ctttccctta-cctttcccagcttctgga 36087


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 189,031,551
Number of extensions: 10447810
Number of successful extensions: 202476
Number of sequences better than 10.0: 20
Number of HSP's gapped: 202476
Number of HSP's successfully gapped: 31
Length of query: 1057
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1034
Effective length of database: 18,503,978,556
Effective search space: 19133113826904
Effective search space used: 19133113826904
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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