| Clone Name | FLbaf56m13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051208.1| Oryza sativa (japonica cultivar-group) Os01g0825900 (Os01g0825900) mRNA, complete cds Length = 2287 Score = 480 bits (242), Expect = e-132 Identities = 368/410 (89%) Strand = Plus / Plus Query: 446 gactgcggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttc 505 ||||||||||||||||| |||||||||| ||| |||| |||||||| |||||||||||| Sbjct: 1380 gactgcggcgaggaccccgcggcgtgctgcctctcgtcgctgtgcaccttctgcgtgttc 1439 Query: 506 ggctggaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctg 565 |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 1440 ggctggaacatggagcggctcgggttcggcaacatgtacgtccacaccgccatgttcctg 1499 Query: 566 ctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggcgctcaacatccacgactac 625 ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| Sbjct: 1500 ctgctctgcgtcgcgcccttctgggtattcaacatcacggcgctccacatccacgactac 1559 Query: 626 gtcctcagcgacgccttcggcgccgccggcgtcgcgctctgcttcctcgggctcctgtac 685 | ||| ||||||||| | |||||||| || ||||||| ||||||||||| || |||||| Sbjct: 1560 gacctgagcgacgccgtgggcgccgcggggatcgcgctgtgcttcctcggcctgctgtac 1619 Query: 686 ggcggcttctgggggatccagatgaggaagcggctcgggctgccccggagcaggtggtgc 745 ||||| |||||| || |||||||| ||||| || ||| |||||| ||||| |||||||| Sbjct: 1620 ggcgggttctggagggtccagatgcggaagaggttcgcgctgccggggagccggtggtgc 1679 Query: 746 tgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctggccgtgcgcgctc 805 ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1680 tgcggctcggcgtcgctgacggactacgcgcggtggctcttctgctggccgtgcgcgctc 1739 Query: 806 gcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacggcgg 855 ||||| ||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 1740 gcgcaggaggtgcgcacggggaacctgtacgacgtcgaggacggcggcgg 1789 Score = 264 bits (133), Expect = 7e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 6 tcatgagcatattccagcatcccaacctcgtccaccacctcgttctcctctgccggtggc 65 |||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| |||| Sbjct: 946 tcatgagcatataccagcatcccagcctgatccaccacctcgttcttctctgccgatggc 1005 Query: 66 gtccggaggacgccgccgagctaagaaaggtgtactgcaagaatggcgcccgccgtccca 125 | |||||||||||||| ||||| | |||||||||||||||||||||| |||||||||| Sbjct: 1006 ggccggaggacgccgcggagctccggaaggtgtactgcaagaatggcgaccgccgtcccg 1065 Query: 126 acgagcgagcgcacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagt 185 ||| || |||||||||||| |||||||||| |||||||| ||||| ||||| || |||| Sbjct: 1066 gcgaacgggcgcacatgtccgtcgtggtggctctcctccatgtcacttgcatttctcagt 1125 Query: 186 acatggtgtgcagcctgtactggggctacccaagcaggtcacgctccgagttcgccgaga 245 || |||| |||| ||| ||||||| |||| ||||| || || ||||| |||||||| | Sbjct: 1126 acgtggtttgcaacctctactgggcttaccgcagcagatcgcgatccgaattcgccgaca 1185 Query: 246 acttgttcttcatcctcggcgtcgccgcgccggtcgtcgccggcactcacgcggtgtaca 305 | || |||||| |||||||||||| |||||| ||||||||||| | || ||||||||| Sbjct: 1186 atttcttcttcgtcctcggcgtcgtcgcgcccgtcgtcgccggagcgtacacggtgtaca 1245 Query: 306 gccctctaggcag 318 ||||||||||||| Sbjct: 1246 gccctctaggcag 1258
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 480 bits (242), Expect = e-132 Identities = 368/410 (89%) Strand = Plus / Plus Query: 446 gactgcggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttc 505 ||||||||||||||||| |||||||||| ||| |||| |||||||| |||||||||||| Sbjct: 35323559 gactgcggcgaggaccccgcggcgtgctgcctctcgtcgctgtgcaccttctgcgtgttc 35323618 Query: 506 ggctggaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctg 565 |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 35323619 ggctggaacatggagcggctcgggttcggcaacatgtacgtccacaccgccatgttcctg 35323678 Query: 566 ctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggcgctcaacatccacgactac 625 ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| Sbjct: 35323679 ctgctctgcgtcgcgcccttctgggtattcaacatcacggcgctccacatccacgactac 35323738 Query: 626 gtcctcagcgacgccttcggcgccgccggcgtcgcgctctgcttcctcgggctcctgtac 685 | ||| ||||||||| | |||||||| || ||||||| ||||||||||| || |||||| Sbjct: 35323739 gacctgagcgacgccgtgggcgccgcggggatcgcgctgtgcttcctcggcctgctgtac 35323798 Query: 686 ggcggcttctgggggatccagatgaggaagcggctcgggctgccccggagcaggtggtgc 745 ||||| |||||| || |||||||| ||||| || ||| |||||| ||||| |||||||| Sbjct: 35323799 ggcgggttctggagggtccagatgcggaagaggttcgcgctgccggggagccggtggtgc 35323858 Query: 746 tgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctggccgtgcgcgctc 805 ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 35323859 tgcggctcggcgtcgctgacggactacgcgcggtggctcttctgctggccgtgcgcgctc 35323918 Query: 806 gcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacggcgg 855 ||||| ||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 35323919 gcgcaggaggtgcgcacggggaacctgtacgacgtcgaggacggcggcgg 35323968 Score = 264 bits (133), Expect = 7e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 6 tcatgagcatattccagcatcccaacctcgtccaccacctcgttctcctctgccggtggc 65 |||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| |||| Sbjct: 35323125 tcatgagcatataccagcatcccagcctgatccaccacctcgttcttctctgccgatggc 35323184 Query: 66 gtccggaggacgccgccgagctaagaaaggtgtactgcaagaatggcgcccgccgtccca 125 | |||||||||||||| ||||| | |||||||||||||||||||||| |||||||||| Sbjct: 35323185 ggccggaggacgccgcggagctccggaaggtgtactgcaagaatggcgaccgccgtcccg 35323244 Query: 126 acgagcgagcgcacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagt 185 ||| || |||||||||||| |||||||||| |||||||| ||||| ||||| || |||| Sbjct: 35323245 gcgaacgggcgcacatgtccgtcgtggtggctctcctccatgtcacttgcatttctcagt 35323304 Query: 186 acatggtgtgcagcctgtactggggctacccaagcaggtcacgctccgagttcgccgaga 245 || |||| |||| ||| ||||||| |||| ||||| || || ||||| |||||||| | Sbjct: 35323305 acgtggtttgcaacctctactgggcttaccgcagcagatcgcgatccgaattcgccgaca 35323364 Query: 246 acttgttcttcatcctcggcgtcgccgcgccggtcgtcgccggcactcacgcggtgtaca 305 | || |||||| |||||||||||| |||||| ||||||||||| | || ||||||||| Sbjct: 35323365 atttcttcttcgtcctcggcgtcgtcgcgcccgtcgtcgccggagcgtacacggtgtaca 35323424 Query: 306 gccctctaggcag 318 ||||||||||||| Sbjct: 35323425 gccctctaggcag 35323437 Score = 46.1 bits (23), Expect = 0.32 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa-ttaattaatgaa 1177 |||||| ||||||||||| ||||||||||| | |||||||||| Sbjct: 17791242 tgccacataagcaaaaatctgatgtggcaagtgaattaatgaa 17791284 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||| ||||||||||| Sbjct: 27906552 tgccacataagcaaaaatctgatgtggcaa 27906581 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 643 cggcgccgccggcgtcgcgct 663 ||||||||||||||||||||| Sbjct: 3237219 cggcgccgccggcgtcgcgct 3237239
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 480 bits (242), Expect = e-132 Identities = 368/410 (89%) Strand = Plus / Plus Query: 446 gactgcggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttc 505 ||||||||||||||||| |||||||||| ||| |||| |||||||| |||||||||||| Sbjct: 87420 gactgcggcgaggaccccgcggcgtgctgcctctcgtcgctgtgcaccttctgcgtgttc 87479 Query: 506 ggctggaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctg 565 |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 87480 ggctggaacatggagcggctcgggttcggcaacatgtacgtccacaccgccatgttcctg 87539 Query: 566 ctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggcgctcaacatccacgactac 625 ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| Sbjct: 87540 ctgctctgcgtcgcgcccttctgggtattcaacatcacggcgctccacatccacgactac 87599 Query: 626 gtcctcagcgacgccttcggcgccgccggcgtcgcgctctgcttcctcgggctcctgtac 685 | ||| ||||||||| | |||||||| || ||||||| ||||||||||| || |||||| Sbjct: 87600 gacctgagcgacgccgtgggcgccgcggggatcgcgctgtgcttcctcggcctgctgtac 87659 Query: 686 ggcggcttctgggggatccagatgaggaagcggctcgggctgccccggagcaggtggtgc 745 ||||| |||||| || |||||||| ||||| || ||| |||||| ||||| |||||||| Sbjct: 87660 ggcgggttctggagggtccagatgcggaagaggttcgcgctgccggggagccggtggtgc 87719 Query: 746 tgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctggccgtgcgcgctc 805 ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 87720 tgcggctcggcgtcgctgacggactacgcgcggtggctcttctgctggccgtgcgcgctc 87779 Query: 806 gcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacggcgg 855 ||||| ||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 87780 gcgcaggaggtgcgcacggggaacctgtacgacgtcgaggacggcggcgg 87829 Score = 264 bits (133), Expect = 7e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 6 tcatgagcatattccagcatcccaacctcgtccaccacctcgttctcctctgccggtggc 65 |||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| |||| Sbjct: 86986 tcatgagcatataccagcatcccagcctgatccaccacctcgttcttctctgccgatggc 87045 Query: 66 gtccggaggacgccgccgagctaagaaaggtgtactgcaagaatggcgcccgccgtccca 125 | |||||||||||||| ||||| | |||||||||||||||||||||| |||||||||| Sbjct: 87046 ggccggaggacgccgcggagctccggaaggtgtactgcaagaatggcgaccgccgtcccg 87105 Query: 126 acgagcgagcgcacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagt 185 ||| || |||||||||||| |||||||||| |||||||| ||||| ||||| || |||| Sbjct: 87106 gcgaacgggcgcacatgtccgtcgtggtggctctcctccatgtcacttgcatttctcagt 87165 Query: 186 acatggtgtgcagcctgtactggggctacccaagcaggtcacgctccgagttcgccgaga 245 || |||| |||| ||| ||||||| |||| ||||| || || ||||| |||||||| | Sbjct: 87166 acgtggtttgcaacctctactgggcttaccgcagcagatcgcgatccgaattcgccgaca 87225 Query: 246 acttgttcttcatcctcggcgtcgccgcgccggtcgtcgccggcactcacgcggtgtaca 305 | || |||||| |||||||||||| |||||| ||||||||||| | || ||||||||| Sbjct: 87226 atttcttcttcgtcctcggcgtcgtcgcgcccgtcgtcgccggagcgtacacggtgtaca 87285 Query: 306 gccctctaggcag 318 ||||||||||||| Sbjct: 87286 gccctctaggcag 87298
>dbj|AK101175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A05, full insert sequence Length = 2290 Score = 480 bits (242), Expect = e-132 Identities = 368/410 (89%) Strand = Plus / Plus Query: 446 gactgcggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttc 505 ||||||||||||||||| |||||||||| ||| |||| |||||||| |||||||||||| Sbjct: 1383 gactgcggcgaggaccccgcggcgtgctgcctctcgtcgctgtgcaccttctgcgtgttc 1442 Query: 506 ggctggaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctg 565 |||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 1443 ggctggaacatggagcggctcgggttcggcaacatgtacgtccacaccgccatgttcctg 1502 Query: 566 ctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggcgctcaacatccacgactac 625 ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| Sbjct: 1503 ctgctctgcgtcgcgcccttctgggtattcaacatcacggcgctccacatccacgactac 1562 Query: 626 gtcctcagcgacgccttcggcgccgccggcgtcgcgctctgcttcctcgggctcctgtac 685 | ||| ||||||||| | |||||||| || ||||||| ||||||||||| || |||||| Sbjct: 1563 gacctgagcgacgccgtgggcgccgcggggatcgcgctgtgcttcctcggcctgctgtac 1622 Query: 686 ggcggcttctgggggatccagatgaggaagcggctcgggctgccccggagcaggtggtgc 745 ||||| |||||| || |||||||| ||||| || ||| |||||| ||||| |||||||| Sbjct: 1623 ggcgggttctggagggtccagatgcggaagaggttcgcgctgccggggagccggtggtgc 1682 Query: 746 tgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctggccgtgcgcgctc 805 ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1683 tgcggctcggcgtcgctgacggactacgcgcggtggctcttctgctggccgtgcgcgctc 1742 Query: 806 gcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacggcgg 855 ||||| ||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 1743 gcgcaggaggtgcgcacggggaacctgtacgacgtcgaggacggcggcgg 1792 Score = 264 bits (133), Expect = 7e-67 Identities = 268/313 (85%) Strand = Plus / Plus Query: 6 tcatgagcatattccagcatcccaacctcgtccaccacctcgttctcctctgccggtggc 65 |||||||||||| ||||||||||| ||| |||||||||||||||| |||||||| |||| Sbjct: 949 tcatgagcatataccagcatcccagcctgatccaccacctcgttcttctctgccgatggc 1008 Query: 66 gtccggaggacgccgccgagctaagaaaggtgtactgcaagaatggcgcccgccgtccca 125 | |||||||||||||| ||||| | |||||||||||||||||||||| |||||||||| Sbjct: 1009 ggccggaggacgccgcggagctccggaaggtgtactgcaagaatggcgaccgccgtcccg 1068 Query: 126 acgagcgagcgcacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagt 185 ||| || |||||||||||| |||||||||| |||||||| ||||| ||||| || |||| Sbjct: 1069 gcgaacgggcgcacatgtccgtcgtggtggctctcctccatgtcacttgcatttctcagt 1128 Query: 186 acatggtgtgcagcctgtactggggctacccaagcaggtcacgctccgagttcgccgaga 245 || |||| |||| ||| ||||||| |||| ||||| || || ||||| |||||||| | Sbjct: 1129 acgtggtttgcaacctctactgggcttaccgcagcagatcgcgatccgaattcgccgaca 1188 Query: 246 acttgttcttcatcctcggcgtcgccgcgccggtcgtcgccggcactcacgcggtgtaca 305 | || |||||| |||||||||||| |||||| ||||||||||| | || ||||||||| Sbjct: 1189 atttcttcttcgtcctcggcgtcgtcgcgcccgtcgtcgccggagcgtacacggtgtaca 1248 Query: 306 gccctctaggcag 318 ||||||||||||| Sbjct: 1249 gccctctaggcag 1261
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 178 bits (90), Expect = 3e-41 Identities = 281/342 (82%), Gaps = 2/342 (0%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| |||||||| ||||| ||||||||||||||||||||| | |||| ||||| ||| Sbjct: 524092 gtgcaccttctgcgtcttcgggtggaacatggagcggctcgggttcggcagcatgttcgt 524033 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| ||||||||||| ||||||| | |||||| | ||| |||| Sbjct: 524032 gcacaccgccacgttcgtgctgctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 523973 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgc-gctct 665 |||| ||||||||||| ||| || ||||| | |||| |||||||| ||| ||||| Sbjct: 523972 gctccacatccacgacgtggtcatcggcgacatggttggcggcgccggcg-cgctgctct 523914 Query: 666 gcttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggc 725 || | |||||| || |||||||||| |||| ||||||||||||| | ||| |||||| Sbjct: 523913 gcgtgtgcgggctgctctacggcggctactggaggatccagatgagagaacggttcgggc 523854 Query: 726 tgccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcc 785 | || |||| | ||||||||||||| ||||| ||||||||||||| | ||||||| Sbjct: 523853 ttccggcgagcgcggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctct 523794 Query: 786 tctgctggccgtgcgcgctcgcgcaagaggtgcgcacggcga 827 ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 523793 tctgctggccgtgcgcgctggcgcaggaggtgcgcacggcga 523752 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 520746 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 520687 Query: 547 gcac 550 |||| Sbjct: 520686 gcac 520683 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||||||||||||||||||||| Sbjct: 524314 gttcttcgtgctcggcgtcgccgcgccggtcgtcgccg 524277 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Minus Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacg 851 |||||||||||| ||||| |||||| | ||| | ||||||||||||||| |||| |||| Sbjct: 520434 gccgtgcgcgctggcgcaggaggtgaggacgaccaacctgtacgacgtggaggaggacg 520376 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1143 taagcaaaaatatgatgtggcaa 1165 ||||||||||||||||||||||| Sbjct: 12627662 taagcaaaaatatgatgtggcaa 12627640 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| |||||| ||||||||||||||||| Sbjct: 17839848 ccacataagcacaaatatgatgtggcaat 17839876 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1005 gacggcagaggcaagccggcgacgg 1029 |||||||| |||||||||||||||| Sbjct: 17952177 gacggcagcggcaagccggcgacgg 17952201
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 178 bits (90), Expect = 3e-41 Identities = 281/342 (82%), Gaps = 2/342 (0%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| |||||||| ||||| ||||||||||||||||||||| | |||| ||||| ||| Sbjct: 22680 gtgcaccttctgcgtcttcgggtggaacatggagcggctcgggttcggcagcatgttcgt 22739 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| ||||||||||| ||||||| | |||||| | ||| |||| Sbjct: 22740 gcacaccgccacgttcgtgctgctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 22799 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgc-gctct 665 |||| ||||||||||| ||| || ||||| | |||| |||||||| ||| ||||| Sbjct: 22800 gctccacatccacgacgtggtcatcggcgacatggttggcggcgccggcg-cgctgctct 22858 Query: 666 gcttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggc 725 || | |||||| || |||||||||| |||| ||||||||||||| | ||| |||||| Sbjct: 22859 gcgtgtgcgggctgctctacggcggctactggaggatccagatgagagaacggttcgggc 22918 Query: 726 tgccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcc 785 | || |||| | ||||||||||||| ||||| ||||||||||||| | ||||||| Sbjct: 22919 ttccggcgagcgcggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctct 22978 Query: 786 tctgctggccgtgcgcgctcgcgcaagaggtgcgcacggcga 827 ||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 22979 tctgctggccgtgcgcgctggcgcaggaggtgcgcacggcga 23020 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 26026 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 26085 Query: 547 gcac 550 |||| Sbjct: 26086 gcac 26089 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||||||||||||||||||||| Sbjct: 22458 gttcttcgtgctcggcgtcgccgcgccggtcgtcgccg 22495 Score = 54.0 bits (27), Expect = 0.001 Identities = 51/59 (86%) Strand = Plus / Plus Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacg 851 |||||||||||| ||||| |||||| | ||| | ||||||||||||||| |||| |||| Sbjct: 26338 gccgtgcgcgctggcgcaggaggtgaggacgaccaacctgtacgacgtggaggaggacg 26396
>ref|NM_001072087.1| Oryza sativa (japonica cultivar-group) Os11g0109700 (Os11g0109700) mRNA, complete cds Length = 1889 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 985 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 1044 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 1045 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 1104 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 1105 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 1164 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 1165 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 1224 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 1225 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 1284 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1285 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 1322 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 769 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 806
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 451682 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 451623 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 451622 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 451563 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 451562 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 451503 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 451502 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 451443 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 451442 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 451383 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 451382 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 451345 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 447927 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 447868 Query: 547 gcac 550 |||| Sbjct: 447867 gcac 447864 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 451898 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 451861 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 7821537 tgccacataagcaaaaatatgatgtggcaa 7821508 Score = 46.1 bits (23), Expect = 0.32 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacg 851 |||||||||| | ||||| |||||| | ||||| ||||||||||||||| |||| |||| Sbjct: 447615 gccgtgcgcg-tggcgcaggaggtgaggacggccaacctgtacgacgtggaggaggacg 447558
>dbj|AK120107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023K14, full insert sequence Length = 2068 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 1030 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 1089 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 1090 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 1149 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 1150 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 1209 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 1210 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 1269 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 1270 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 1329 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1330 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 1367 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 814 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 851
>dbj|AK072035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100D03, full insert sequence Length = 1879 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 841 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 900 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 901 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 960 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 961 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 1020 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 1021 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 1080 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 1081 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 1140 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1141 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 1178 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 625 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 662
>dbj|AK065601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028L18, full insert sequence Length = 2050 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 1004 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 1063 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 1064 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 1123 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 1124 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 1183 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 1184 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 1243 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 1244 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 1303 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1304 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 1341 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 788 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 825
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 159000 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 158941 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 158940 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 158881 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 158880 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 158821 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 158820 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 158761 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 158760 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 158701 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 158700 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 158663 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 155245 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 155186 Query: 547 gcac 550 |||| Sbjct: 155185 gcac 155182 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Minus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 159216 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 159179 Score = 46.1 bits (23), Expect = 0.32 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacg 851 |||||||||| | ||||| |||||| | ||||| ||||||||||||||| |||| |||| Sbjct: 154933 gccgtgcgcg-tggcgcaggaggtgaggacggccaacctgtacgacgtggaggaggacg 154876
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 139 bits (70), Expect = 3e-29 Identities = 271/338 (80%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| |||||||||||||||||||| | |||| ||||| ||| Sbjct: 118629 gtgcaccttctgcgccttcgggtggaacatggagcggctcggattcggcagcatgttcgt 118688 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 118689 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 118748 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 118749 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 118808 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 118809 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 118868 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 118869 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 118928 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 118929 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 118966 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 122385 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 122444 Query: 547 gcac 550 |||| Sbjct: 122445 gcac 122448 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcgaacctgtacgacgtgaaggacgacg 851 |||||||||||| ||||| |||||| | ||||| ||||||||||||||| |||| |||| Sbjct: 122697 gccgtgcgcgctggcgcaggaggtgaggacggccaacctgtacgacgtggaggaggacg 122755 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 118413 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 118450
>dbj|AK059364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E04, full insert sequence Length = 1889 Score = 131 bits (66), Expect = 7e-27 Identities = 270/338 (79%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 |||||| ||||||| ||||| ||||||||||||||||||| | |||| ||||| ||| Sbjct: 985 gtgcaccttctgcgccttcgggtggaacatggagcggctcgaattcggcagcatgttcgt 1044 Query: 547 gcacacggccatgttcctgctgctgtgcgtcgcgcccttctgggtgttcaacgtcacggc 606 |||||| |||| |||| |||| |||||| ||||||| | |||||| | ||| |||| Sbjct: 1045 gcacaccgccacgttcgtgcttctgtgcttcgcgccgctgtgggtgatgggcgtgtcggc 1104 Query: 607 gctcaacatccacgactacgtcctcagcgacgccttcggcgccgccggcgtcgcgctctg 666 |||| ||||||||||| ||| || ||||| |||||| |||||| | | |||||| Sbjct: 1105 gctccacatccacgacgtggtcatcggcgacatggtcggcggcgccggggccctgctctg 1164 Query: 667 cttcctcgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggct 726 | | ||| || || |||||||||| |||| ||||||||||||| | || ||||||| Sbjct: 1165 cgtgtgcggcctgctctacggcggctactggaggatccagatgagagaacgcttcgggct 1224 Query: 727 gccccggagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcct 786 || ||||| | ||||||||||||| ||||| ||||||||||||| | ||||||| | Sbjct: 1225 tccggcgagcacggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctctt 1284 Query: 787 ctgctggccgtgcgcgctcgcgcaagaggtgcgcacgg 824 |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1285 ctgctggccgtgtgcgctggcgcaggaggtgcgcacgg 1322 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 250 gttcttcatcctcggcgtcgccgcgccggtcgtcgccg 287 ||||||| | |||||||||| ||||||||||||||||| Sbjct: 769 gttcttcgtgctcggcgtcgtcgcgccggtcgtcgccg 806
>ref|NM_001072490.1| Oryza sativa (japonica cultivar-group) Os12g0109700 (Os12g0109700) mRNA, complete cds Length = 1543 Score = 125 bits (63), Expect = 4e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 673 cgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggctgccccg 732 |||||| || |||||||||| |||| ||||||||||||| | ||| ||||||| || Sbjct: 702 cgggctgctctacggcggctactggaggatccagatgagagaacggttcgggcttccggc 761 Query: 733 gagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctg 792 |||| | ||||||||||||| ||||| ||||||||||||| | ||||||| ||||||| Sbjct: 762 gagcgcggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctcttctgctg 821 Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcga 827 |||||||||||| ||||| |||||||||||||||| Sbjct: 822 gccgtgcgcgctggcgcaggaggtgcgcacggcga 856
>dbj|AK058609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A07, full insert sequence Length = 1543 Score = 125 bits (63), Expect = 4e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 673 cgggctcctgtacggcggcttctgggggatccagatgaggaagcggctcgggctgccccg 732 |||||| || |||||||||| |||| ||||||||||||| | ||| ||||||| || Sbjct: 702 cgggctgctctacggcggctactggaggatccagatgagagaacggttcgggcttccggc 761 Query: 733 gagcaggtggtgctgcggctcgtcgtcgctgacggactacgcgcagtggctcctctgctg 792 |||| | ||||||||||||| ||||| ||||||||||||| | ||||||| ||||||| Sbjct: 762 gagcgcggcgtgctgcggctcgccgtcggtgacggactacgcccggtggctcttctgctg 821 Query: 793 gccgtgcgcgctcgcgcaagaggtgcgcacggcga 827 |||||||||||| ||||| |||||||||||||||| Sbjct: 822 gccgtgcgcgctggcgcaggaggtgcgcacggcga 856
>ref|NM_001072086.1| Oryza sativa (japonica cultivar-group) Os11g0109600 (Os11g0109600) mRNA, complete cds Length = 2991 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 741 gtgcacgttctgcgtgttcgggtggaacatggagcgcctggggctcggcaacatgtacgt 800 Query: 547 gcac 550 |||| Sbjct: 801 gcac 804
>ref|NM_001056386.1| Oryza sativa (japonica cultivar-group) Os03g0299700 (Os03g0299700) mRNA, complete cds Length = 2236 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 1137 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 1078 Query: 547 gcac 550 |||| Sbjct: 1077 gcac 1074 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 946 tcctctacggcggcttctggcggacgcagatgcggaagcgg 906
>ref|NM_001056385.1| Oryza sativa (japonica cultivar-group) Os03g0299800 (Os03g0299800) mRNA, complete cds Length = 2366 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 1517 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 1576 Query: 547 gcac 550 |||| Sbjct: 1577 gcac 1580 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 1708 tcctctacggcggcttctggcggacgcagatgcggaagcgg 1748
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 54694 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 54635 Query: 547 gcac 550 |||| Sbjct: 54634 gcac 54631 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 54503 tcctctacggcggcttctggcggacgcagatgcggaagcgg 54463
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 10496982 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 10496923 Query: 547 gcac 550 |||| Sbjct: 10496922 gcac 10496919 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 22899342 tgccacataagcaaaaatatgatgtggcaa 22899371 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 10496791 tcctctacggcggcttctggcggacgcagatgcggaagcgg 10496751 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| ||||||||||||| |||||||||| Sbjct: 18174550 ccacataagcaaaaatataatgtggcaat 18174578
>dbj|AK103635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134D12, full insert sequence Length = 2369 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 1520 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 1579 Query: 547 gcac 550 |||| Sbjct: 1580 gcac 1583 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 1711 tcctctacggcggcttctggcggacgcagatgcggaagcgg 1751
>dbj|AK100929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135J01, full insert sequence Length = 2239 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 1101 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 1160 Query: 547 gcac 550 |||| Sbjct: 1161 gcac 1164 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 1292 tcctctacggcggcttctggcggacgcagatgcggaagcgg 1332
>dbj|AK064332.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G03, full insert sequence Length = 2289 Score = 95.6 bits (48), Expect = 4e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 487 gtgcacgttctgcgtgttcggctggaacatggagcggctcgggctgggcaacatgtacgt 546 ||||||||||||||||||||| ||||||||||||||||||||| | || ||||||||||| Sbjct: 1440 gtgcacgttctgcgtgttcgggtggaacatggagcggctcgggttcggaaacatgtacgt 1499 Query: 547 gcac 550 |||| Sbjct: 1500 gcac 1503 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 678 tcctgtacggcggcttctgggggatccagatgaggaagcgg 718 |||| ||||||||||||||| ||| |||||| |||||||| Sbjct: 1631 tcctctacggcggcttctggcggacgcagatgcggaagcgg 1671
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 85.7 bits (43), Expect = 4e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 451 cggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttcggctg 510 |||||| |||||| ||||||| | ||||||| ||| |||||||||||||||||||| || Sbjct: 23965 cggcgacgacccgacggcgtggtggctgtcgtgcctctgcacgttctgcgtgttcgggtg 24024 Query: 511 gaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctgctgct 570 ||||||||||||| | || || || |||| | |||||||| | | || |||| ||| || Sbjct: 24025 gaacatggagcggatgggcctcgggaacaagcacgtgcacgccgtcacgttcgcgctcct 24084 Query: 571 gtgcgtcgcgcccttctgggtgttcaacgtc 601 ||| ||||||| |||||||| |||||||| Sbjct: 24085 ctgcttcgcgccgctctgggtgctcaacgtc 24115 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Plus Query: 137 cacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagtacatggtgtgc 196 ||||||||| | ||||| || |||||||||||| ||||| || |||||||| ||||| Sbjct: 23663 cacatgtccgtggtggtcgcgctcctccacgtcgcctgcttcgcgcagtacgccatgtgc 23722 Query: 197 agcctgtactggggctac 214 |||| |||||||||||| Sbjct: 23723 ggcctctactggggctac 23740
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 85.7 bits (43), Expect = 4e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 451 cggcgaggacccggcggcgtgctacctgtcgttcctgtgcacgttctgcgtgttcggctg 510 |||||| |||||| ||||||| | ||||||| ||| |||||||||||||||||||| || Sbjct: 15910276 cggcgacgacccgacggcgtggtggctgtcgtgcctctgcacgttctgcgtgttcgggtg 15910335 Query: 511 gaacatggagcggctcgggctgggcaacatgtacgtgcacacggccatgttcctgctgct 570 ||||||||||||| | || || || |||| | |||||||| | | || |||| ||| || Sbjct: 15910336 gaacatggagcggatgggcctcgggaacaagcacgtgcacgccgtcacgttcgcgctcct 15910395 Query: 571 gtgcgtcgcgcccttctgggtgttcaacgtc 601 ||| ||||||| |||||||| |||||||| Sbjct: 15910396 ctgcttcgcgccgctctgggtgctcaacgtc 15910426 Score = 52.0 bits (26), Expect = 0.005 Identities = 65/78 (83%) Strand = Plus / Plus Query: 137 cacatgtccttcgtggtggccctcctccacgtcacctgcatctcgcagtacatggtgtgc 196 ||||||||| | ||||| || |||||||||||| ||||| || |||||||| ||||| Sbjct: 15909974 cacatgtccgtggtggtcgcgctcctccacgtcgcctgcttcgcgcagtacgccatgtgc 15910033 Query: 197 agcctgtactggggctac 214 |||| |||||||||||| Sbjct: 15910034 ggcctctactggggctac 15910051
>ref|XM_636437.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0206012) mRNA, complete cds Length = 3855 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1166 ttaattaatgaaaaaagaaagaaatt 1191 |||||||||||||||||||||||||| Sbjct: 3025 ttaattaatgaaaaaagaaagaaatt 3050
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 176411 tgccacataagcaaaaatatgatgtggcaa 176440
>gb|AC138003.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0020C11, complete sequence Length = 30321 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 12539 tgccacataagcaaaaatatgatgtggcaa 12510
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 108844 tgccacataagcaaaaatatgatgtggcaa 108873
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 16049534 tgccacataagcaaaaatatgatgtggcaa 16049505
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||||||||||||||| Sbjct: 49747 tgccacataagcaaaaatatgatgtggcaa 49718
>emb|AL807237.17| Mouse DNA sequence from clone RP23-384O9 on chromosome X, complete sequence Length = 162709 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 |||||||||||||||||||||||||| Sbjct: 79552 aattaattaatgaaaaaagaaagaaa 79577
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 262 cggcgtcgccgcgccggtcgtcg 284 ||||||||||||||||||||||| Sbjct: 9330179 cggcgtcgccgcgccggtcgtcg 9330201 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||| ||||||||||| Sbjct: 34361536 tgccacataagcaaaaatgtgatgtggcaa 34361565
>emb|AL392109.8| Human DNA sequence from clone RP13-459H7 on chromosome 10, complete sequence Length = 101319 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1172 aatgaaaaaagaaagaaattgag 1194 ||||||||||||||||||||||| Sbjct: 244 aatgaaaaaagaaagaaattgag 222
>emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chromosome 10 Contains the 5' end of the NRP1 gene for neuropilin 1, a novel gene and a CpG island, complete sequence Length = 124540 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1172 aatgaaaaaagaaagaaattgag 1194 ||||||||||||||||||||||| Sbjct: 122784 aatgaaaaaagaaagaaattgag 122762
>emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0043H09, complete sequence Length = 88824 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 262 cggcgtcgccgcgccggtcgtcg 284 ||||||||||||||||||||||| Sbjct: 13550 cggcgtcgccgcgccggtcgtcg 13572
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 46.1 bits (23), Expect = 0.32 Identities = 39/43 (90%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa-ttaattaatgaa 1177 |||||| ||||||||||| ||||||||||| | |||||||||| Sbjct: 38364 tgccacataagcaaaaatctgatgtggcaagtgaattaatgaa 38406
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 642 tcggcgccgccggcgtcgcgctc 664 ||||||||||||||||||||||| Sbjct: 8576186 tcggcgccgccggcgtcgcgctc 8576208 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 cgcgccggtcgtcgccggcac 291 ||||||||||||||||||||| Sbjct: 1161550 cgcgccggtcgtcgccggcac 1161530
>gb|AC024361.21| Homo sapiens chromosome 17, clone RP11-388C12, complete sequence Length = 111473 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1070 agttgacatcggctgttgggtgg 1092 ||||||||||||||||||||||| Sbjct: 62265 agttgacatcggctgttgggtgg 62287
>gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, complete sequence Length = 148509 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1070 agttgacatcggctgttgggtgg 1092 ||||||||||||||||||||||| Sbjct: 111460 agttgacatcggctgttgggtgg 111438
>emb|AL844499.5|CNS08CAW Oryza sativa chromosome 12, . BAC OSJNBb0092K12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129540 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1143 taagcaaaaatatgatgtggcaa 1165 ||||||||||||||||||||||| Sbjct: 72850 taagcaaaaatatgatgtggcaa 72828
>ref|NM_001042497.1| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 6, mRNA Length = 7457 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 5866 aaagaaagaaattgagtaattt 5887
>ref|NM_001042496.1| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 5, mRNA Length = 7754 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 6163 aaagaaagaaattgagtaattt 6184
>ref|NM_001042495.1| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 4, mRNA Length = 7363 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 5772 aaagaaagaaattgagtaattt 5793
>ref|NM_001042494.1| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 3, mRNA Length = 7688 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 6097 aaagaaagaaattgagtaattt 6118
>ref|NM_005135.2| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 2, mRNA Length = 7327 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 5736 aaagaaagaaattgagtaattt 5757
>ref|NM_133647.1| Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 1, mRNA Length = 7502 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 5911 aaagaaagaaattgagtaattt 5932
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||| ||||||||||| Sbjct: 45303 tgccacataagcaaaaatgtgatgtggcaa 45332
>gb|AC139129.10| Mus musculus chromosome 1, clone RP24-245K18, complete sequence Length = 152884 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaa 1185 |||||||||||||||||||||| Sbjct: 120277 aattaattaatgaaaaaagaaa 120256
>gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosome 14, complete sequence Length = 170642 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1172 aatgaaaaaagaaagaaattga 1193 |||||||||||||||||||||| Sbjct: 103692 aatgaaaaaagaaagaaattga 103671
>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence Length = 131182 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaa 1185 |||||||||||||||||||||| Sbjct: 64292 aattaattaatgaaaaaagaaa 64271
>gb|AC009517.6| Homo sapiens chromosome 7 clone RP11-181K7, complete sequence Length = 141395 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 92646 aattaattaattaaaaaagaaagaaa 92671
>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence Length = 200774 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 4955 aattaattaattaaaaaagaaagaaa 4930
>gb|AC079203.9| Homo sapiens chromosome 15, clone RP11-1084A12, complete sequence Length = 197568 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1179 aaagaaagaaattgagtaattt 1200 |||||||||||||||||||||| Sbjct: 167865 aaagaaagaaattgagtaattt 167844
>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence Length = 198822 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 183482 aattaattaattaaaaaagaaagaaa 183457
>gb|AC011453.4| Homo sapiens chromosome 19 clone CTC-339O9, complete sequence Length = 128736 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1168 aattaatgaaaaaagaaagaaa 1189 |||||||||||||||||||||| Sbjct: 103818 aattaatgaaaaaagaaagaaa 103839
>emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chromosome 17, complete sequence Length = 210326 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaa 1185 |||||||||||||||||||||| Sbjct: 198751 aattaattaatgaaaaaagaaa 198772
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||| ||||||||||| Sbjct: 85939 tgccacataagcaaaaatgtgatgtggcaa 85968
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| |||||||||||||||||| |||| Sbjct: 15343586 tgccacataagcaaaaatatgatgtagcaa 15343615
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1168 aattaatgaaaaaagaaagaaa 1189 |||||||||||||||||||||| Sbjct: 102130 aattaatgaaaaaagaaagaaa 102151
>gb|AC154696.2| Mus musculus BAC clone RP24-343I10 from chromosome 17, complete sequence Length = 144385 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaa 1185 |||||||||||||||||||||| Sbjct: 126632 aattaattaatgaaaaaagaaa 126611
>gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's Hospital Oakland Research Institute) complete sequence Length = 148510 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1168 aattaatgaaaaaagaaagaaa 1189 |||||||||||||||||||||| Sbjct: 841 aattaatgaaaaaagaaagaaa 820
>emb|AL732595.13| Mouse DNA sequence from clone RP23-87I3 on chromosome 11 Contains a novel pseudogene, a RNA binding motif protein (Rbm8) pseudogene, the 5' end of the Acyp2 gene for muscle type acylphosphatase 2 and a CpG island, complete sequence Length = 115716 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaa 1185 |||||||||||||||||||||| Sbjct: 75343 aattaattaatgaaaaaagaaa 75364
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| |||||||||||||||||| |||| Sbjct: 60949 tgccacataagcaaaaatatgatgtagcaa 60978
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||||||||||| ||||||||||| Sbjct: 93233 tgccacataagcaaaaatctgatgtggcaa 93262
>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18, complete sequence Length = 214763 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 |||||||||||||| ||||||||||| Sbjct: 129230 aattaattaatgaagaaagaaagaaa 129255
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1136 tgccacctaagcaaaaatatgatgtggcaa 1165 |||||| ||| ||||||||||||||||||| Sbjct: 38581 tgccacataaacaaaaatatgatgtggcaa 38610
>emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chromosome X, complete sequence Length = 129970 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 22956 aattaattaattaaaaaagaaagaaa 22981
>emb|AL807390.11| Mouse DNA sequence from clone RP23-223F2 on chromosome 4, complete sequence Length = 150847 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||||||||||||| |||| Sbjct: 139138 aattaattaatgaaaaaagaaggaaa 139163
>emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chromosome 4, complete sequence Length = 228767 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 218575 aattaattaattaaaaaagaaagaaa 218550
>emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chromosome 4, complete sequence Length = 209063 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaagaaa 1189 ||||||||||| |||||||||||||| Sbjct: 60658 aattaattaattaaaaaagaaagaaa 60633
>gb|M30123.1|FSAFIBAA Petromyzon marinus fibrinogen alpha chain mRNA Length = 3530 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 tccaccacctcgttctcctctg 57 |||||||||||||||||||||| Sbjct: 1019 tccaccacctcgttctcctctg 1040
>ref|XM_001007588.1| Tetrahymena thermophila SB210 dnaK protein (TTHERM_00058550) mRNA, complete cds Length = 1938 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1173 atgaaaaaagaaagaaattga 1193 ||||||||||||||||||||| Sbjct: 1655 atgaaaaaagaaagaaattga 1675
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 262 cggcgtcgccgcgccggtcgtcgccggca 290 |||||||| ||||||| |||||||||||| Sbjct: 249270 cggcgtcggcgcgccgatcgtcgccggca 249242
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 3429332 tgttcctgctgctgtgcgtcg 3429352
>dbj|AK239599.1| Sus scrofa mRNA, clone:THY010115C06, expressed in thymus Length = 1778 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 821 acggcgaacctgtacgacgtg 841 ||||||||||||||||||||| Sbjct: 1034 acggcgaacctgtacgacgtg 1054
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 643 cggcgccgccggcgtcgcgct 663 ||||||||||||||||||||| Sbjct: 3463585 cggcgccgccggcgtcgcgct 3463605 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 254 ttcatcctcggcgtcgccgcgccggtcgtcgcc 286 ||||||||||||||||| ||| |||||||||| Sbjct: 3727479 ttcatcctcggcgtcgcgccgctggtcgtcgcc 3727511
>ref|XM_001209207.1| Aspergillus terreus NIH2624 predicted protein (ATEG_01842) mRNA, complete cds Length = 1263 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 645 gcgccgccggcgtcgcgctct 665 ||||||||||||||||||||| Sbjct: 1126 gcgccgccggcgtcgcgctct 1106
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 3504116 tgttcctgctgctgtgcgtcg 3504136
>gb|AC190478.1| Pan troglodytes BAC clone CH251-509H20 from chromosome 7, complete sequence Length = 206620 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1171 taatgaaaaaagaaagaaatt 1191 ||||||||||||||||||||| Sbjct: 116737 taatgaaaaaagaaagaaatt 116717
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1158 tgtggcaattaattaatgaaaaaagaaag 1186 ||||||| ||||||||| ||||||||||| Sbjct: 18337347 tgtggcatttaattaataaaaaaagaaag 18337375
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 642 tcggcgccgccggcgtcgcgc 662 ||||||||||||||||||||| Sbjct: 5341127 tcggcgccgccggcgtcgcgc 5341147
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 256 catcctcggcgtcgccgcgccggtcgtcgccgg 288 |||||||||| |||||||| |||||||||||| Sbjct: 2809096 catcctcggcatcgccgcggtggtcgtcgccgg 2809064
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 2746110 tgttcctgctgctgtgcgtcg 2746130
>emb|BX890543.17| Zebrafish DNA sequence from clone CH211-235H1 in linkage group 14, complete sequence Length = 159163 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1165 attaattaatgaaaaaagaaagaaa 1189 ||||||||||||| ||||||||||| Sbjct: 59933 attaattaatgaagaaagaaagaaa 59909
>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence Length = 166651 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1165 attaattaatgaaaaaagaaagaaa 1189 |||||| |||||||||||||||||| Sbjct: 132595 attaataaatgaaaaaagaaagaaa 132571
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 3632724 tgttcctgctgctgtgcgtcg 3632744
>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence Length = 161617 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1167 taattaatgaaaaaagaaaga 1187 ||||||||||||||||||||| Sbjct: 5670 taattaatgaaaaaagaaaga 5650
>gb|AC154871.13| Mus musculus chromosome 1, clone RP23-354B17, complete sequence Length = 211644 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1167 taattaatgaaaaaagaaaga 1187 ||||||||||||||||||||| Sbjct: 140370 taattaatgaaaaaagaaaga 140350
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| ||||||||||||| |||||||||| Sbjct: 85614 ccacataagcaaaaatataatgtggcaat 85642
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 167699 tgttcctgctgctgtgcgtcg 167679
>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence Length = 177736 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1158 tgtggcaattaattaatgaaaaaagaaag 1186 ||||||| ||||||||| ||||||||||| Sbjct: 128350 tgtggcatttaattaataaaaaaagaaag 128378
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 377687 tgttcctgctgctgtgcgtcg 377667
>gb|AC099591.7| Mus musculus chromosome 19, clone RP23-401D18, complete sequence Length = 191578 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaaagaa 1188 ||||||||||| ||||||||||||| Sbjct: 164822 aattaattaataaaaaaagaaagaa 164846
>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence Length = 215910 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1168 aattaatgaaaaaagaaagaa 1188 ||||||||||||||||||||| Sbjct: 27644 aattaatgaaaaaagaaagaa 27664
>gb|AC007094.3| Homo sapiens BAC clone RP11-289L12 from 7, complete sequence Length = 145135 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1171 taatgaaaaaagaaagaaatt 1191 ||||||||||||||||||||| Sbjct: 113018 taatgaaaaaagaaagaaatt 112998
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 gcgctcgcgcaagaggtgcgc 820 ||||||||||||||||||||| Sbjct: 3535566 gcgctcgcgcaagaggtgcgc 3535586
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cctcgtccaccacctcgttct 51 ||||||||||||||||||||| Sbjct: 62483 cctcgtccaccacctcgttct 62463
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 cggcgtcgccgcgccggtcgt 282 ||||||||||||||||||||| Sbjct: 4857665 cggcgtcgccgcgccggtcgt 4857645
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| |||||| ||||||||||||||||| Sbjct: 3006319 ccacataagcataaatatgatgtggcaat 3006291
>emb|AL603902.4| Human DNA sequence from clone RP11-167I10 on chromosome 6 Contains the 3' end of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 158024 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1167 taattaatgaaaaaagaaagaaatt 1191 |||||||| |||||||||||||||| Sbjct: 11184 taattaataaaaaaagaaagaaatt 11208
>ref|XM_678107.1| PREDICTED: Danio rerio peroxisome proliferator activated receptor gamma coactivator 1 alpha (PGC-1alpha), mRNA Length = 3030 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 cctcgtccaccacctcgttctcctc 55 ||||||||||| ||||||||||||| Sbjct: 989 cctcgtccacctcctcgttctcctc 1013
>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1 Contains the MGAT3 gene for mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, the gene for a predicted protein, the ATF4 gene for activating transcription factor 4 (tax-responsive enhancer element B67) and the 5' end of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit. Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 112460 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1175 gaaaaaagaaagaaattgagt 1195 ||||||||||||||||||||| Sbjct: 92577 gaaaaaagaaagaaattgagt 92557
>emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chromosome 11, complete sequence Length = 169765 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaa 1184 ||||||||||||||||||||| Sbjct: 146364 aattaattaatgaaaaaagaa 146384
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 187380 tgttcctgctgctgtgcgtcg 187360
>gb|AF027207.2|AF027207 Homo sapiens chromosome 21 clone cosmid D13C2 map 21q22.2, complete sequence Length = 37773 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1163 caattaattaatgaaaaaagaaagaaatt 1191 |||||||||||| || ||||||||||||| Sbjct: 30710 caattaattaattaacaaagaaagaaatt 30738
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1158 tgtggcaattaattaatgaaaaaagaaag 1186 ||||||| ||||||||| ||||||||||| Sbjct: 5409 tgtggcatttaattaataaaaaaagaaag 5437
>gb|AC022298.31|AC022298 Mus musculus BAC RP23-423C8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 112209 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaa 1184 ||||||||||||||||||||| Sbjct: 57657 aattaattaatgaaaaaagaa 57677
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 643 cggcgccgccggcgtcgcgct 663 ||||||||||||||||||||| Sbjct: 54848 cggcgccgccggcgtcgcgct 54868
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| |||||| ||||||||||||||||| Sbjct: 57042 ccacataagcataaatatgatgtggcaat 57014
>gb|AC009526.4|AC009526 Arabidopsis thaliana chromosome I BAC F2J6 genomic sequence, complete sequence Length = 108061 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1164 aattaattaatgaaaaaagaaagaa 1188 |||||||| |||||||||||||||| Sbjct: 61651 aattaattgatgaaaaaagaaagaa 61627
>emb|AL714028.16| Mouse DNA sequence from clone RP23-139B20 on chromosome 4, complete sequence Length = 117560 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1164 aattaattaatgaaaaaagaa 1184 ||||||||||||||||||||| Sbjct: 21311 aattaattaatgaaaaaagaa 21331
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1163 caattaattaatgaaaaaagaaagaaatt 1191 |||||||||||| || ||||||||||||| Sbjct: 317941 caattaattaattaacaaagaaagaaatt 317913
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 Length = 340000 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1163 caattaattaatgaaaaaagaaagaaatt 1191 |||||||||||| || ||||||||||||| Sbjct: 220136 caattaattaattaacaaagaaagaaatt 220164
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 tgttcctgctgctgtgcgtcg 578 ||||||||||||||||||||| Sbjct: 172212 tgttcctgctgctgtgcgtcg 172192
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 947 gtcaaactgacggtggacggcgaga 971 |||||||| |||||||||||||||| Sbjct: 334564 gtcaaactcacggtggacggcgaga 334540
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 800 gcgctcgcgcaagaggtgcgc 820 ||||||||||||||||||||| Sbjct: 3531087 gcgctcgcgcaagaggtgcgc 3531107
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 ggcgccgccggcgtcgcgctc 664 ||||||||||||||||||||| Sbjct: 1196415 ggcgccgccggcgtcgcgctc 1196395 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 644 ggcgccgccggcgtcgcgctc 664 ||||||||||||||||||||| Sbjct: 1703711 ggcgccgccggcgtcgcgctc 1703691 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 ggcgccgccggcgtcgcgctc 664 ||||||||||||||||||||| Sbjct: 4218667 ggcgccgccggcgtcgcgctc 4218687
>gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, complete sequence Length = 158740 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1168 aattaatgaaaaaagaaagaa 1188 ||||||||||||||||||||| Sbjct: 14465 aattaatgaaaaaagaaagaa 14445
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 gacggcagaggcaagccggcgacgg 1029 |||||||| |||||||||||||||| Sbjct: 46379 gacggcagcggcaagccggcgacgg 46355
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ccacctaagcaaaaatatgatgtggcaat 1166 |||| |||||| ||||||||||||||||| Sbjct: 59046 ccacataagcacaaatatgatgtggcaat 59074
>emb|AL929314.9| Zebrafish DNA sequence from clone CH211-155E19 in linkage group 5, complete sequence Length = 176048 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1167 taattaatgaaaaaagaaaga 1187 ||||||||||||||||||||| Sbjct: 64561 taattaatgaaaaaagaaaga 64581
>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence Length = 201383 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1165 attaattaatgaaaaaagaaagaaa 1189 |||||| |||||||||||||||||| Sbjct: 125453 attaataaatgaaaaaagaaagaaa 125477 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 194,917,880 Number of extensions: 12696034 Number of successful extensions: 429296 Number of sequences better than 10.0: 124 Number of HSP's gapped: 429290 Number of HSP's successfully gapped: 193 Length of query: 1303 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1280 Effective length of database: 18,503,978,556 Effective search space: 23685092551680 Effective search space used: 23685092551680 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)