ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56i20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os08g0454400:Os08g0454400 | 28 | 1.6 | 2 | AK108228:Os09g0244600 | 28 | 1.6 | 3 | AK102070:Os03g0300200 | 28 | 2.1 | 4 | AK110116:Os05g0501400 | 28 | 2.8 | 5 | AK103762:Os03g0174200 | 27 | 3.6 | 6 | AK060616:Os03g0174200 | 27 | 3.6 | 7 | AK106429:Os05g0127300 | 27 | 6.2 | 8 | AK072126:Os03g0321500 | 27 | 6.2 | 9 | AK066634:Os10g0561200 | 27 | 6.2 | 10 | AK066296:Os11g0672300 | 27 | 6.2 | 11 | AK066896:Os03g0270200 | 27 | 6.3 | 12 | AK060809:Os03g0270200 | 27 | 6.3 | 13 | AK111793:Os06g0666100 | 26 | 8.1 | 14 | Y11527:Os10g0521700 | 26 | 8.3 | 15 | AK072390:Os10g0521700 | 26 | 8.3 | 16 | AK070263:Os03g0819400 | 26 | 8.3 | 17 | AK102832:Os01g0750600 | 23 | 9.7 | 18 | AK064397:Os01g0750600 | 23 | 9.7 |
|---|
>Os08g0454400:Os08g0454400 | Length = 178 Score = 28.5 bits (62), Expect = 1.6 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Frame = +3 Query: 3 RQPLPTMEGAWLEHLH--------GS*ERKQDQRDEPQS*APGQGALQLCGASPDLSGGR 158 RQ + T +G +L + G+ R++ +RD P Q ++L S G+ Sbjct: 43 RQAVHTGQGRFLHAIRQVHRQAEQGAEARRERRRDRGCQIRPLQHRIRLLQGLAASSKGK 102 Query: 159 LRYARARIGKSQNGNGELRQESTP 230 L AR+R G++ +G+ + ++ P Sbjct: 103 LGDARSRSGETGSGSSSITEQPPP 126
>AK108228:Os09g0244600 | Length = 174 Score = 28.5 bits (62), Expect = 1.6 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = -3 Query: 214 RSSPLPFCDLPIRARAYLSRPPERSGEAPQS*SAPCPGAQLCGSS 80 RSSP P LP R+R+ RPP + P S +AP P G S Sbjct: 10 RSSP-PDGALPPRSRSPRWRPPSSTPPRPSSSTAPPPPVAAAGCS 53
>AK102070:Os03g0300200 | Length = 419 Score = 28.1 bits (61), Expect = 2.1 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 217 CRSSPLPFCDLPIRARAYLSRPPERSGEAPQS*SAPCPGAQLC 89 CRS + C LP Y S PP+ + S CPGA +C Sbjct: 154 CRSVKVFRCQLPRSNAFYSSEPPKHN----DSDKPLCPGAPVC 192
>AK110116:Os05g0501400 | Length = 837 Score = 27.7 bits (60), Expect = 2.8 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Frame = -3 Query: 307 CIHHTQRIPIIRFPS--DTTEWGKRIKRGVDSCRSSPLPFCDLPIRARAYLSRPPERSG 137 C + T ++R DTT G+ CR L C A A LS PP R G Sbjct: 344 CANGTDGFAVVRHAKAPDTTAATVDYDAGLQLCRRRCLGNCSCTAYANANLSAPPGRRG 402
>AK103762:Os03g0174200 | Length = 398 Score = 27.3 bits (59), Expect = 3.6 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -3 Query: 274 RFPSDTTEWGKRIKRGVDSCRSSPLPFCDLPIRARAYLSRPPERSGEA 131 RFPS +T K +K G S SSPL P++ + S+ E S +A Sbjct: 318 RFPSPSTNRVKNVKAGGMSMASSPL---KKPLKEKGTPSKDLENSKDA 362
>AK060616:Os03g0174200 | Length = 398 Score = 27.3 bits (59), Expect = 3.6 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -3 Query: 274 RFPSDTTEWGKRIKRGVDSCRSSPLPFCDLPIRARAYLSRPPERSGEA 131 RFPS +T K +K G S SSPL P++ + S+ E S +A Sbjct: 318 RFPSPSTNRVKNVKAGGMSMASSPL---KKPLKEKGTPSKDLENSKDA 362
>AK106429:Os05g0127300 | Length = 335 Score = 26.6 bits (57), Expect = 6.2 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = -3 Query: 145 RSGEAPQS*SAPCP--GAQLCGSSRWSCFRSQEP*RCSSHAPSIVGRGC 5 R P++ A CP G++ S+RW+ R P +S + S R C Sbjct: 55 RRRRRPRARDAACPKAGSRSPSSARWAASRGSAPSSTASSSASAATRRC 103
>AK072126:Os03g0321500 | Length = 843 Score = 26.6 bits (57), Expect = 6.2 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -2 Query: 188 LADSCSRVPQPTA*EVRRGTTKLKRSLPRSSALRFI 81 +AD VP+ E RRGT+KL SL RSS+ + I Sbjct: 740 VADINHSVPRQ---EKRRGTSKLTSSLSRSSSTKTI 772
>AK066634:Os10g0561200 | Length = 521 Score = 26.6 bits (57), Expect = 6.2 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +3 Query: 105 GQGALQLCGASPDLSGGRLRYARARIGKSQNGNGELRQESTPLFIL 242 G G + CG SP+L G R + G S N GELR + +L Sbjct: 75 GGGGGRRCGRSPELEGERFLWYAPHSGFS-NQVGELRNAAVAAALL 119
>AK066296:Os11g0672300 | Length = 214 Score = 26.6 bits (57), Expect = 6.2 Identities = 9/40 (22%), Positives = 20/40 (50%) Frame = -3 Query: 319 VRTPCIHHTQRIPIIRFPSDTTEWGKRIKRGVDSCRSSPL 200 V++ + Q P++ + T W + + + SC+ +PL Sbjct: 110 VQSEIAFYLQLFPLVSYVDATLNWVRHLNKADPSCKEAPL 149
>AK066896:Os03g0270200 | Length = 840 Score = 26.6 bits (57), Expect = 6.3 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 1 DGSPYRL--WKAHGSSIFMALESGSRTSGMNR 90 DGSP+R KAHG++ + SGS SG +R Sbjct: 678 DGSPFRKDKRKAHGNNNIDSGSSGSEESGKHR 709
>AK060809:Os03g0270200 | Length = 580 Score = 26.6 bits (57), Expect = 6.3 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 1 DGSPYRL--WKAHGSSIFMALESGSRTSGMNR 90 DGSP+R KAHG++ + SGS SG +R Sbjct: 418 DGSPFRKDKRKAHGNNNIDSGSSGSEESGKHR 449
>AK111793:Os06g0666100 | Length = 261 Score = 26.2 bits (56), Expect = 8.1 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = +3 Query: 138 PDLSGGRLRYARARIGKSQNGNGELRQESTPLFILFPHSVVSD 266 PDL+ G R+ R+ G G L + + P+S++ D Sbjct: 154 PDLAAGFPRFENLRVDGGGGGGGGLSDDDDDHQVTTPNSILED 196
>Y11527:Os10g0521700 | Length = 210 Score = 26.2 bits (56), Expect = 8.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 193 KTAMVNSGRSLPPFLSFSPIQLYQMEIE 276 KT + N GRSLPP FS +L + +E Sbjct: 172 KTCLSN-GRSLPPLFDFSAAELEGLPVE 198
>AK072390:Os10g0521700 | Length = 469 Score = 26.2 bits (56), Expect = 8.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 193 KTAMVNSGRSLPPFLSFSPIQLYQMEIE 276 KT + N GRSLPP FS +L + +E Sbjct: 431 KTCLSN-GRSLPPLFDFSAAELEGLPVE 457
>AK070263:Os03g0819400 | Length = 203 Score = 26.2 bits (56), Expect = 8.3 Identities = 18/41 (43%), Positives = 20/41 (48%) Frame = -1 Query: 156 DRLRGQERHHKAEALPAQELSFAVHPAGPASALKSHEDARA 34 D RGQ+ HKA A EL V PAG + L S A A Sbjct: 59 DCRRGQQHQHKAAAANGGEL---VSPAGSSRYLLSSRAAAA 96
>AK102832:Os01g0750600 | Length = 682 Score = 23.1 bits (48), Expect(2) = 9.7 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 222 STPLFILFPHSVVSDG 269 STP +L PHS VS G Sbjct: 249 STPPLLLQPHSFVSSG 264 Score = 21.2 bits (43), Expect(2) = 9.7 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +1 Query: 289 SACDGYMESSLLG 327 +A DG+ ES+LLG Sbjct: 290 AAADGFSESNLLG 302
>AK064397:Os01g0750600 | Length = 682 Score = 23.1 bits (48), Expect(2) = 9.7 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 Query: 222 STPLFILFPHSVVSDG 269 STP +L PHS VS G Sbjct: 249 STPPLLLQPHSFVSSG 264 Score = 21.2 bits (43), Expect(2) = 9.7 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +1 Query: 289 SACDGYMESSLLG 327 +A DG+ ES+LLG Sbjct: 290 AAADGFSESNLLG 302 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,077,268 Number of extensions: 319026 Number of successful extensions: 846 Number of sequences better than 10.0: 18 Number of HSP's gapped: 846 Number of HSP's successfully gapped: 20 Length of query: 138 Length of database: 15,399,855 Length adjustment: 90 Effective length of query: 48 Effective length of database: 11,796,165 Effective search space: 566215920 Effective search space used: 566215920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
