ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56h23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0167600:Os08g0167600 41 7e-04
2Os11g0703100:Os11g0703100 30 1.6
3Os07g0297500:Os07g0297500 30 1.6
4Os11g0446000:Os11g0446000 28 6.2
5Os03g0850200:Os03g0850200 28 6.2
6Os01g0739400:Os01g0739400 28 6.2
7AK068017:Os11g0601700 28 6.2
8AK065712:Os08g0530000 28 6.2
9Os11g0543300:Os11g0543300 28 8.1

>Os08g0167600:Os08g0167600 |
          Length = 129
 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +3

Query: 432 PRFHEDYYGPGGHEPNHH 485
           PRF EDY GPGGH PNHH
Sbjct: 104 PRFSEDYSGPGGHSPNHH 121



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>Os11g0703100:Os11g0703100 |
          Length = 202

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
 Frame = +1

Query: 211 WTGTFMKHSKTSRNNWPGSHPNPMAPLIRPAASPAR--PMGIAQV-----QQWSRRLIP 366
           WT TF  H+      WP   PN   P I    +  R  P G+A +       WS R++P
Sbjct: 20  WTTTFTMHNLCPYTVWPLVTPNAGQPAIITGGATIRLDPNGLASLAFPAAAGWSGRVVP 78



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>Os07g0297500:Os07g0297500 |
          Length = 469

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +3

Query: 228 EALE---NKQEQLAGQPPKPNGAADSTGSKPCTADGNCPGTAMEQTTHTT 368
           EALE   N   QLA +P   N     + S+P    G  PGT    T H T
Sbjct: 397 EALELQANLPTQLATRPSPRNSPQPESESRPVNRRGGAPGTGGAPTDHGT 446



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>Os11g0446000:Os11g0446000 |
          Length = 481

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 253 NWPGSHPNPMAPLIRPAASPARPMGIAQVQQWSRRLIP 366
           NWPG  P    P + P ASP  P G A     SR + P
Sbjct: 264 NWPGHAP----PQLPPGASPLFPPGPAAFHPSSRPMPP 297



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>Os03g0850200:Os03g0850200 |
          Length = 527

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 362 MSRLLHCCTWAIPIGRA 312
           ++ LLHC  WA+P+G A
Sbjct: 481 LANLLHCFDWALPVGMA 497



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>Os01g0739400:Os01g0739400 |
          Length = 581

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +3

Query: 222 LHEALENKQEQLAGQPPKPNGAADSTGSKPCTADGNCPGTAMEQTTHTTIV 374
           +  A EN+ +Q    PP PN       S P  A G    ++   TT   IV
Sbjct: 11  IRSAEENQTDQHENPPPPPNPIPSHPLSSPAAAAGGGGSSSSASTTMARIV 61



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>AK068017:Os11g0601700 |
          Length = 278

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = +3

Query: 240 NKQEQLAGQPPKPNGAADSTGSKPCTADGNCPGTAMEQTTHTTIVVKDRDHHQVVASAYA 419
           N+      QP   NG+  +T   P    GN P  AM   T+T   + ++ HHQ   ++  
Sbjct: 152 NQSNLAMSQPVANNGSNSATQPVPHHIWGNGPNLAMVHPTNTLSPLHNQ-HHQSAGASQV 210

Query: 420 RSAVPR 437
            ++ P+
Sbjct: 211 YASRPQ 216



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>AK065712:Os08g0530000 |
          Length = 491

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 258 AGQPPKPNGAADSTGSKPCTADGNCPGTAMEQTTHTTIVVKDRDHHQVV 404
           A  PP    AA   GSK     G   GTA  +TT   ++++    H+VV
Sbjct: 53  APPPPPSAAAAAEEGSKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVV 101



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>Os11g0543300:Os11g0543300 |
          Length = 502

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 299 RQQALHGRWELPRYSNGADDSYHH 370
           R+  LHG ++ PR+ +GA    HH
Sbjct: 268 RRSMLHGEYQSPRWGHGAGARAHH 291


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,241,381
Number of extensions: 511062
Number of successful extensions: 1654
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1653
Number of HSP's successfully gapped: 9
Length of query: 238
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 140
Effective length of database: 11,475,837
Effective search space: 1606617180
Effective search space used: 1606617180
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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