ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf60c11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK074024:Os10g0198100 | 43 | 9e-04 | 2 | AK107852:Os02g0546600 | 35 | 0.24 | 3 | AK109969: | 31 | 2.7 | 4 | AK109377:Os04g0674000 | 31 | 3.5 | 5 | AK063686:Os05g0296700 | 31 | 3.5 | 6 | AK109628:Os04g0389800 | 30 | 4.6 | 7 | AK103326:Os01g0111900 | 30 | 6.0 | 8 | AK099199:Os05g0200100 | 28 | 6.2 | 9 | AK061208:Os05g0200100 | 28 | 6.2 | 10 | Os11g0596200:Os11g0596200 | 30 | 7.8 | 11 | AK110364: | 30 | 7.8 | 12 | AK120589:Os09g0509700 | 30 | 7.8 | 13 | AK064328:Os05g0154700 | 30 | 7.8 |
|---|
>AK074024:Os10g0198100 | Length = 236 Score = 42.7 bits (99), Expect = 9e-04 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 21/153 (13%) Frame = +2 Query: 1139 RDVRAHGLGFDWTRIHRVPGDVDKFV-VLRPHDFNRRWRTRCIICGDKIASGKGNQYCSP 1315 R A G G++ T I R+ + ++ +L P + R++ C+ CG +I G+ N CS Sbjct: 26 RSQDAIGCGYNLTGIQRIKMNGALWIPILPPPVVDARYQGLCLQCGRRI-KGRSN-LCSI 83 Query: 1316 FCKLDSIDNGG---------------GRDIVQRERICKVCTLAYSSAHCPGH--HLHHRG 1444 C+L + G G+ I Q +++C C ++ CP H H H +G Sbjct: 84 SCRLLRVHTGARRGMAQNLVEFSESVGQPIHQLDQLCGQCLRSFCGVSCPNHLVHPHPQG 143 Query: 1445 DDT---EILHVIHLEGXXXXXXXXXXXEF*QRV 1534 + +I+ + L G EF Q + Sbjct: 144 NHAAGPDIITIERLNGWLVIDQEQLPVEFGQDI 176
>AK107852:Os02g0546600 | Length = 247 Score = 34.7 bits (78), Expect = 0.24 Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -3 Query: 1018 AHAGRGGTPRGSGSNCCRQNTD-RNCRRRSWSTRPRPHRRKKLLDVGLHPDAGQVNSQRE 842 A AG GG RG G R D R+CRRR+W R R + + VG G N +R Sbjct: 32 AAAGNGGALRGRGDGGHRGCADARHCRRRAWRRRRRLRAAARAV-VGRAAAGG--NRRRA 88 Query: 841 EERRRPGRAD 812 RR G D Sbjct: 89 ARRRCAGGGD 98
>AK109969: | Length = 882 Score = 31.2 bits (69), Expect = 2.7 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -2 Query: 350 KRLGVRPPNNTLLYGSQNLPKSIMLGNIVEKNRAY 246 K +G++PP L+YG K++M + + RA+ Sbjct: 288 KSIGIKPPRGVLMYGPPGTGKTLMARAVANETRAF 322
>AK109377:Os04g0674000 | Length = 235 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/55 (38%), Positives = 25/55 (45%) Frame = -3 Query: 1093 GELKQCSWRFLVSGIPENTAPRLPCAHAGRGGTPRGSGSNCCRQNTDRNCRRRSW 929 G ++C R +V P +APR PRGSG CCR CRRR W Sbjct: 6 GRARRCPGRRVVVPGPPGSAPR----------CPRGSGV-CCR------CRRRRW 43
>AK063686:Os05g0296700 | Length = 117 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -3 Query: 922 RPRPHRRKKLLDVGLHPDAGQVNSQREEERRRPGRADEWA 803 R RPH R+ GL D G + R +RRR R WA Sbjct: 30 RQRPHARR----AGLRGDGGAGSCPRRRQRRRHSRLQAWA 65
>AK109628:Os04g0389800 | Length = 639 Score = 30.4 bits (67), Expect = 4.6 Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 26/111 (23%) Frame = -3 Query: 1060 VSGIPENTAPRLPCAHA--------GRGGTPRG----SGSNCCRQNTDRNCRRRSWSTRP 917 V G P A R P H GR P G + RQ R+ R Sbjct: 213 VHGSPRPGARRHPQGHPAADGRAVLGRADAPPGVHLPAAEAAGRQPARRSHPPRRRRREA 272 Query: 916 RPHRRKKLLDVGL----------HPDAGQVNSQREEERRRPGRA----DEW 806 RP RR+++L VGL HP + RE +RRP A D W Sbjct: 273 RPLRRRRVLRVGLRAAALRGADGHPGDDHPHGHRELPQRRPALAADARDAW 323
>AK103326:Os01g0111900 | Length = 212 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 11/63 (17%) Frame = -3 Query: 1057 SGIPENTAPRLPCAH--AGRGGTPRGSGSNCCR-QNTDRNCR--------RRSWSTRPRP 911 S +APR C A R TP CCR ++T R R RR W T RP Sbjct: 47 SSATTRSAPRAACPAPAARRARTPARRRPTCCRLRSTTRRRRPSTTPRRPRRRWPTLRRP 106 Query: 910 HRR 902 RR Sbjct: 107 RRR 109
>AK099199:Os05g0200100 | Length = 216 Score = 27.7 bits (60), Expect(2) = 6.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 1206 STSPGTRCILVQSNPRPCALTS 1141 STSP C+L ++NPRP L + Sbjct: 27 STSPSPHCLLSRANPRPPRLAA 48 Score = 20.8 bits (42), Expect(2) = 6.2 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 1312 AAILVTLARRDLVTADNAACPPPS 1241 A L+ L RR +VTA AC S Sbjct: 2 AEALLPLPRRLVVTASTPACSSAS 25
>AK061208:Os05g0200100 | Length = 216 Score = 27.7 bits (60), Expect(2) = 6.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 1206 STSPGTRCILVQSNPRPCALTS 1141 STSP C+L ++NPRP L + Sbjct: 27 STSPSPHCLLSRANPRPPRLAA 48 Score = 20.8 bits (42), Expect(2) = 6.2 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 1312 AAILVTLARRDLVTADNAACPPPS 1241 A L+ L RR +VTA AC S Sbjct: 2 AEALLPLPRRLVVTASTPACSSAS 25
>Os11g0596200:Os11g0596200 | Length = 985 Score = 29.6 bits (65), Expect = 7.8 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = +2 Query: 1247 WRTRCIICGDKIASGK-GNQYCSPFCKLDSIDNGGGRDIVQ----RERICKVCTLAY 1402 WR R C +ASGK GN C+++SID + R+++ KVCT Y Sbjct: 560 WRPRAFCCLKLLASGKLGN---DDLCEVNSIDVEISHMFAEVSFLRKKLVKVCTFDY 613
>AK110364: | Length = 1006 Score = 29.6 bits (65), Expect = 7.8 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 1274 DKIASGKGNQYCSPFCKLDSIDNGGGRDIV 1363 DK+ +G GN Y S D++D G G D + Sbjct: 251 DKLVAGAGNDYLSGGAGSDTLDGGAGDDYI 280
>AK120589:Os09g0509700 | Length = 154 Score = 29.6 bits (65), Expect = 7.8 Identities = 25/72 (34%), Positives = 26/72 (36%) Frame = -3 Query: 1036 APRLPCAHAGRGGTPRGSGSNCCRQNTDRNCRRRSWSTRPRPHRRKKLLDVGLHPDAGQV 857 APR A G PRG CRRR WS R R R GQV Sbjct: 73 APRAGAALRPVRGAPRGGA-----------CRRRRWSWRMRRRR------------GGQV 109 Query: 856 NSQREEERRRPG 821 +R RRR G Sbjct: 110 PLRRVRRRRRCG 121
>AK064328:Os05g0154700 | Length = 466 Score = 29.6 bits (65), Expect = 7.8 Identities = 23/92 (25%), Positives = 38/92 (41%) Frame = -3 Query: 1189 PMYPSPIESEAVRSDVSI*NRSRPTYDIGLHAGELKQCSWRFLVSGIPENTAPRLPCAHA 1010 P YP PIE+E + + + RP A S S P+ + +++ Sbjct: 208 PSYPMPIETEEIANQI---QEKRPVETSRKAAENFTSNS-----SMEPDRNPVSMIPSYS 259 Query: 1009 GRGGTPRGSGSNCCRQNTDRNCRRRSWSTRPR 914 RG GS R+ D N R S++++P+ Sbjct: 260 NRGKEENGSSGLNDRERVDLNSSRISYNSKPQ 291 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 52,835,790 Number of extensions: 1185378 Number of successful extensions: 3529 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3526 Number of HSP's successfully gapped: 15 Length of query: 637 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 530 Effective length of database: 11,115,468 Effective search space: 5891198040 Effective search space used: 5891198040 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
