ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56h12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105607:Os08g0467400 | 471 | e-133 | 2 | AK102279:Os08g0467400 | 471 | e-133 | 3 | AK070501:Os08g0467400 | 471 | e-133 | 4 | Os12g0127600:Os12g0127600 | 31 | 2.5 | 5 | AK108069:Os10g0489800 | 30 | 4.3 | 6 | Os02g0137500:Os02g0137500 | 30 | 5.6 | 7 | Os11g0150700:Os11g0150700 | 30 | 7.4 | 8 | Os02g0158000:Os02g0158000 | 30 | 7.4 |
|---|
>AK105607:Os08g0467400 | Length = 498 Score = 471 bits (1213), Expect = e-133 Identities = 253/398 (63%), Positives = 282/398 (70%), Gaps = 6/398 (1%) Frame = +1 Query: 349 FQPESTPMGVWLRAMGCSLLVSMASLVCLILLPVILFQGKPSKAVVDALAVFGAGAMLGD 528 FQ E +P+G+WL AMGCSLLVSMASLVCL+LLPVI FQGKPSK +VD LA+FGAGAMLGD Sbjct: 121 FQAELSPLGMWLSAMGCSLLVSMASLVCLVLLPVIFFQGKPSKTMVDCLAIFGAGAMLGD 180 Query: 529 SFLHQLPXXXXXXXXXXXXXXXXXXXQEHSHAHSLKDLSVGLSILFGIVMFFIVEKIVRY 708 SFLHQLP EHSHAHSL+DLS+GLS+LFGIV FFIVEKIVRY Sbjct: 181 SFLHQLPHAFGGGHSHTHDHQNHNHSHEHSHAHSLEDLSIGLSVLFGIVFFFIVEKIVRY 240 Query: 709 VEDNSQKXXXXXXXXXXXXXXKRQD------ISGIKSDHDGKDTDQAQQNSSHDGASGNI 870 VEDNSQK KR D ++ + DH+ K +QA++ SHDGA Sbjct: 241 VEDNSQKGAHGMGHHHHHH--KRHDRSDKAKLNHAEKDHEDKGVNQAEKEPSHDGAIEKT 298 Query: 871 DAKNEKESNAAICKEAVLGSQRSALDVMPGEQKRXXXXXXATDREPINSETDPAPGKALS 1050 D +S +AI K + SA DREP+NSE+DPAP KALS Sbjct: 299 DGVTRADSKSAIRKRGLSSGSNSA------------------DREPVNSESDPAPNKALS 340 Query: 1051 SEDPSVSNSNLVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEI 1230 SED SVSNSN+VFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQE+ Sbjct: 341 SEDSSVSNSNMVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEV 400 Query: 1231 GDFGILVRSGFTVSKALFFNFXXXXXXXXXXXXXXXXXXDPGHSSLIEGFTAGGFIYIAV 1410 GDFGILVRSGFTV+KALFFNF DPGHSSLIEGFTAGGFIYIAV Sbjct: 401 GDFGILVRSGFTVTKALFFNFLSALVALAGTALALSLGKDPGHSSLIEGFTAGGFIYIAV 460 Query: 1411 AGVLPQMHDQRTTLSNSMCQLTFLTMGMLVALGISLVE 1524 AGVLP+M+DQ+TT+ +SM QL LTMGMLVALGISLVE Sbjct: 461 AGVLPEMNDQKTTVKSSMIQLVSLTMGMLVALGISLVE 498
>AK102279:Os08g0467400 | Length = 498 Score = 471 bits (1213), Expect = e-133 Identities = 253/398 (63%), Positives = 282/398 (70%), Gaps = 6/398 (1%) Frame = +1 Query: 349 FQPESTPMGVWLRAMGCSLLVSMASLVCLILLPVILFQGKPSKAVVDALAVFGAGAMLGD 528 FQ E +P+G+WL AMGCSLLVSMASLVCL+LLPVI FQGKPSK +VD LA+FGAGAMLGD Sbjct: 121 FQAELSPLGMWLSAMGCSLLVSMASLVCLVLLPVIFFQGKPSKTMVDCLAIFGAGAMLGD 180 Query: 529 SFLHQLPXXXXXXXXXXXXXXXXXXXQEHSHAHSLKDLSVGLSILFGIVMFFIVEKIVRY 708 SFLHQLP EHSHAHSL+DLS+GLS+LFGIV FFIVEKIVRY Sbjct: 181 SFLHQLPHAFGGGHSHTHDHQNHNHSHEHSHAHSLEDLSIGLSVLFGIVFFFIVEKIVRY 240 Query: 709 VEDNSQKXXXXXXXXXXXXXXKRQD------ISGIKSDHDGKDTDQAQQNSSHDGASGNI 870 VEDNSQK KR D ++ + DH+ K +QA++ SHDGA Sbjct: 241 VEDNSQKGAHGMGHHHHHH--KRHDRSDKAKLNHAEKDHEDKGVNQAEKEPSHDGAIEKT 298 Query: 871 DAKNEKESNAAICKEAVLGSQRSALDVMPGEQKRXXXXXXATDREPINSETDPAPGKALS 1050 D +S +AI K + SA DREP+NSE+DPAP KALS Sbjct: 299 DGVTRADSKSAIRKRGLSSGSNSA------------------DREPVNSESDPAPNKALS 340 Query: 1051 SEDPSVSNSNLVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEI 1230 SED SVSNSN+VFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQE+ Sbjct: 341 SEDSSVSNSNMVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEV 400 Query: 1231 GDFGILVRSGFTVSKALFFNFXXXXXXXXXXXXXXXXXXDPGHSSLIEGFTAGGFIYIAV 1410 GDFGILVRSGFTV+KALFFNF DPGHSSLIEGFTAGGFIYIAV Sbjct: 401 GDFGILVRSGFTVTKALFFNFLSALVALAGTALALSLGKDPGHSSLIEGFTAGGFIYIAV 460 Query: 1411 AGVLPQMHDQRTTLSNSMCQLTFLTMGMLVALGISLVE 1524 AGVLP+M+DQ+TT+ +SM QL LTMGMLVALGISLVE Sbjct: 461 AGVLPEMNDQKTTVKSSMIQLVSLTMGMLVALGISLVE 498
>AK070501:Os08g0467400 | Length = 498 Score = 471 bits (1213), Expect = e-133 Identities = 253/398 (63%), Positives = 282/398 (70%), Gaps = 6/398 (1%) Frame = +1 Query: 349 FQPESTPMGVWLRAMGCSLLVSMASLVCLILLPVILFQGKPSKAVVDALAVFGAGAMLGD 528 FQ E +P+G+WL AMGCSLLVSMASLVCL+LLPVI FQGKPSK +VD LA+FGAGAMLGD Sbjct: 121 FQAELSPLGMWLSAMGCSLLVSMASLVCLVLLPVIFFQGKPSKTMVDCLAIFGAGAMLGD 180 Query: 529 SFLHQLPXXXXXXXXXXXXXXXXXXXQEHSHAHSLKDLSVGLSILFGIVMFFIVEKIVRY 708 SFLHQLP EHSHAHSL+DLS+GLS+LFGIV FFIVEKIVRY Sbjct: 181 SFLHQLPHAFGGGHSHTHDHQNHNHSHEHSHAHSLEDLSIGLSVLFGIVFFFIVEKIVRY 240 Query: 709 VEDNSQKXXXXXXXXXXXXXXKRQD------ISGIKSDHDGKDTDQAQQNSSHDGASGNI 870 VEDNSQK KR D ++ + DH+ K +QA++ SHDGA Sbjct: 241 VEDNSQKGAHGMGHHHHHH--KRHDRSDKAKLNHAEKDHEDKGVNQAEKEPSHDGAIEKT 298 Query: 871 DAKNEKESNAAICKEAVLGSQRSALDVMPGEQKRXXXXXXATDREPINSETDPAPGKALS 1050 D +S +AI K + SA DREP+NSE+DPAP KALS Sbjct: 299 DGVTRADSKSAIRKRGLSSGSNSA------------------DREPVNSESDPAPNKALS 340 Query: 1051 SEDPSVSNSNLVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEI 1230 SED SVSNSN+VFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQE+ Sbjct: 341 SEDSSVSNSNMVFGYLNLFSDGVHNFTDGMALGSAFLLHGSVGGWSRTLFLLAHELPQEV 400 Query: 1231 GDFGILVRSGFTVSKALFFNFXXXXXXXXXXXXXXXXXXDPGHSSLIEGFTAGGFIYIAV 1410 GDFGILVRSGFTV+KALFFNF DPGHSSLIEGFTAGGFIYIAV Sbjct: 401 GDFGILVRSGFTVTKALFFNFLSALVALAGTALALSLGKDPGHSSLIEGFTAGGFIYIAV 460 Query: 1411 AGVLPQMHDQRTTLSNSMCQLTFLTMGMLVALGISLVE 1524 AGVLP+M+DQ+TT+ +SM QL LTMGMLVALGISLVE Sbjct: 461 AGVLPEMNDQKTTVKSSMIQLVSLTMGMLVALGISLVE 498
>Os12g0127600:Os12g0127600 | Length = 1051 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Frame = +3 Query: 372 GRVVESDGVLAAGQHGVARL--------PHPPPSNPVSGETVEGRCGCTCSVWGRCNAWR 527 GR V D + A RL P PP P+SG T + G C V+ Sbjct: 954 GRFVHHDSMDGANLPAATRLADALRPLLPAPPQGPPISGPTPQQSNGYDCGVY------- 1006 Query: 528 FISSSTTSCFWWR 566 ++ + C WW+ Sbjct: 1007 LLAVALAICRWWK 1019
>AK108069:Os10g0489800 | Length = 383 Score = 30.4 bits (67), Expect = 4.3 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +3 Query: 9 PQRSGRNALPSPPPAAPGHRSRRR 80 P+R R A+P PP AAPG R R R Sbjct: 60 PRRPPRRAVPVPPRAAPGGRLRLR 83
>Os02g0137500:Os02g0137500 | Length = 1668 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -2 Query: 1261 ILSEPESQNLQSLEEVHERAEIKF*TILQQIHVAEKHFQEPSRQ 1130 +L +PE N QS + HE+ +++Q H ++H +PS Q Sbjct: 413 VLDQPEKMNFQSSQLTHEQ-------LIRQQHSMQQHQMQPSSQ 449
>Os11g0150700:Os11g0150700 | Length = 458 Score = 29.6 bits (65), Expect = 7.4 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +1 Query: 1354 GHSSLIEGFTAGGFIYIAVAGVLP-QMHDQRTTLSN 1458 GH S ++ +T G F++ + GV P + HD TL+N Sbjct: 322 GHGSSVDWWTLGVFVFELLYGVTPFKGHDNEMTLAN 357
>Os02g0158000:Os02g0158000 | Length = 203 Score = 29.6 bits (65), Expect = 7.4 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +3 Query: 366 THGRVVESDGV-LAAGQHGVARLPHPPP----SNPVSGETVEGRCGCTCSV 503 +H VES GV +AA L PPP SNP + E CG + SV Sbjct: 100 SHSSTVESWGVTVAAAAASAGALGLPPPRNGGSNPAADEDCRSYCGSSSSV 150 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 46,493,044 Number of extensions: 1023639 Number of successful extensions: 4062 Number of sequences better than 10.0: 8 Number of HSP's gapped: 4038 Number of HSP's successfully gapped: 8 Length of query: 605 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 499 Effective length of database: 11,155,509 Effective search space: 5566598991 Effective search space used: 5566598991 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
