ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56h12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001068538.1| Oryza sativa (japonica cultivar-group) Os08g0467400 (Os08g0467400) mRNA, complete cds Length = 2553 Score = 494 bits (249), Expect = e-136 Identities = 459/529 (86%) Strand = Plus / Plus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 1095 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 1154 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 1155 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 1214 Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 1215 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 1274 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagagattggagatttt 1239 |||||||| |||||| |||||||||| || |||||||||||||||||| | ||||||||| Sbjct: 1275 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagatttt 1334 Query: 1240 gggattctggttcgctcaggattcaccgtatctaaagccctatttttcaactttctctct 1299 || || ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1335 ggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctct 1394 Query: 1300 gcgttggttgctcttggtgggacagcactggcactttctttgggaacggatccaggacat 1359 |||||||||||||||| ||| |||||||||||| | |||||||||| |||||||| ||| Sbjct: 1395 gcgttggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcat 1454 Query: 1360 tcctctttgattgagggatttactgctggtggttttatttacattgctgtcgcgggagtc 1419 || ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 1455 tcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtc 1514 Query: 1420 ctcccacagatgcacgatcagagaactacgctaagcaactcaatgtgtcagttgactttc 1479 |||||| ||||| | ||||||| ||| || | | | ||| ||| ||||||| || | Sbjct: 1515 ctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttcc 1574 Query: 1480 ctgacaatgggaatgctggtggctcttggcatatctttggtagaatgat 1528 |||||||||||||||||||| || || ||||||||| | |||||||||| Sbjct: 1575 ctgacaatgggaatgctggttgccctcggcatatctctagtagaatgat 1623 Score = 305 bits (154), Expect = 3e-79 Identities = 342/404 (84%), Gaps = 8/404 (1%) Strand = Plus / Plus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 514 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 573 Query: 437 tcctcctcccagtaatcctgtttcaggggaaaccgtcgaaggccgttgtggatgcacttg 496 |||| |||||||||||| | || |||||||| ||||| ||| || | |||||| |||| Sbjct: 574 tcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttg 633 Query: 497 cagtgtttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgctt 556 | | || ||||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct: 634 ccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcct 693 Query: 557 ttggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcatt 616 ||||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||| Sbjct: 694 ttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcatt 753 Query: 617 cacatgcacactccctgaaagatctttctgttggcttgtctattttatttggcattgtaa 676 ||||||||||||| ||| ||||||||||| |||| |||||| || ||||||||||||| Sbjct: 754 cacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgt 813 Query: 677 tgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctcaaaaggggggtc 736 | |||||||| || || ||||||||||||||||| || ||||||||||| || ||| Sbjct: 814 ttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggg---- 869 Query: 737 atagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 870 ---gctcatggcatgggccaccatcatcaccatcataaacgaca 910 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 359 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 406
>dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B01, full insert sequence Length = 1786 Score = 494 bits (249), Expect = e-136 Identities = 459/529 (86%) Strand = Plus / Plus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 1093 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 1152 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 1153 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 1212 Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 1213 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 1272 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagagattggagatttt 1239 |||||||| |||||| |||||||||| || |||||||||||||||||| | ||||||||| Sbjct: 1273 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagatttt 1332 Query: 1240 gggattctggttcgctcaggattcaccgtatctaaagccctatttttcaactttctctct 1299 || || ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1333 ggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctct 1392 Query: 1300 gcgttggttgctcttggtgggacagcactggcactttctttgggaacggatccaggacat 1359 |||||||||||||||| ||| |||||||||||| | |||||||||| |||||||| ||| Sbjct: 1393 gcgttggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcat 1452 Query: 1360 tcctctttgattgagggatttactgctggtggttttatttacattgctgtcgcgggagtc 1419 || ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 1453 tcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtc 1512 Query: 1420 ctcccacagatgcacgatcagagaactacgctaagcaactcaatgtgtcagttgactttc 1479 |||||| ||||| | ||||||| ||| || | | | ||| ||| ||||||| || | Sbjct: 1513 ctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttcc 1572 Query: 1480 ctgacaatgggaatgctggtggctcttggcatatctttggtagaatgat 1528 |||||||||||||||||||| || || ||||||||| | |||||||||| Sbjct: 1573 ctgacaatgggaatgctggttgccctcggcatatctctagtagaatgat 1621 Score = 297 bits (150), Expect = 7e-77 Identities = 309/362 (85%) Strand = Plus / Plus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 512 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 571 Query: 437 tcctcctcccagtaatcctgtttcaggggaaaccgtcgaaggccgttgtggatgcacttg 496 |||| |||||||||||| | || |||||||| ||||| ||| || | |||||| |||| Sbjct: 572 tcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttg 631 Query: 497 cagtgtttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgctt 556 | | || ||||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct: 632 ccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcct 691 Query: 557 ttggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcatt 616 ||||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||| Sbjct: 692 ttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcatt 751 Query: 617 cacatgcacactccctgaaagatctttctgttggcttgtctattttatttggcattgtaa 676 ||||||||||||| ||| ||||||||||| |||| |||||| || ||||||||||||| Sbjct: 752 cacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgt 811 Query: 677 tgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctcaaaaggggggtc 736 | |||||||| || || ||||||||||||||||| || ||||||||||| || |||| || Sbjct: 812 ttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggggctc 871 Query: 737 at 738 || Sbjct: 872 at 873 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 357 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 404
>dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089E10, full insert sequence Length = 1972 Score = 494 bits (249), Expect = e-136 Identities = 459/529 (86%) Strand = Plus / Plus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 1096 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 1155 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 1156 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 1215 Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 1216 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 1275 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagagattggagatttt 1239 |||||||| |||||| |||||||||| || |||||||||||||||||| | ||||||||| Sbjct: 1276 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagatttt 1335 Query: 1240 gggattctggttcgctcaggattcaccgtatctaaagccctatttttcaactttctctct 1299 || || ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1336 ggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctct 1395 Query: 1300 gcgttggttgctcttggtgggacagcactggcactttctttgggaacggatccaggacat 1359 |||||||||||||||| ||| |||||||||||| | |||||||||| |||||||| ||| Sbjct: 1396 gcgttggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcat 1455 Query: 1360 tcctctttgattgagggatttactgctggtggttttatttacattgctgtcgcgggagtc 1419 || ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 1456 tcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtc 1515 Query: 1420 ctcccacagatgcacgatcagagaactacgctaagcaactcaatgtgtcagttgactttc 1479 |||||| ||||| | ||||||| ||| || | | | ||| ||| ||||||| || | Sbjct: 1516 ctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttcc 1575 Query: 1480 ctgacaatgggaatgctggtggctcttggcatatctttggtagaatgat 1528 |||||||||||||||||||| || || ||||||||| | |||||||||| Sbjct: 1576 ctgacaatgggaatgctggttgccctcggcatatctctagtagaatgat 1624 Score = 305 bits (154), Expect = 3e-79 Identities = 342/404 (84%), Gaps = 8/404 (1%) Strand = Plus / Plus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 515 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 574 Query: 437 tcctcctcccagtaatcctgtttcaggggaaaccgtcgaaggccgttgtggatgcacttg 496 |||| |||||||||||| | || |||||||| ||||| ||| || | |||||| |||| Sbjct: 575 tcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttg 634 Query: 497 cagtgtttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgctt 556 | | || ||||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct: 635 ccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcct 694 Query: 557 ttggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcatt 616 ||||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||| Sbjct: 695 ttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcatt 754 Query: 617 cacatgcacactccctgaaagatctttctgttggcttgtctattttatttggcattgtaa 676 ||||||||||||| ||| ||||||||||| |||| |||||| || ||||||||||||| Sbjct: 755 cacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgt 814 Query: 677 tgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctcaaaaggggggtc 736 | |||||||| || || ||||||||||||||||| || ||||||||||| || |||| || Sbjct: 815 ttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggggctc 874 Query: 737 atagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 || ||| |||| |||||||||||||||||||||||||| Sbjct: 875 atggct-------tgggccaccatcatcaccatcataaacgaca 911 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 360 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 407
>dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054A11, full insert sequence Length = 2555 Score = 494 bits (249), Expect = e-136 Identities = 459/529 (86%) Strand = Plus / Plus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 1097 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 1156 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 1157 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 1216 Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 1217 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 1276 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagagattggagatttt 1239 |||||||| |||||| |||||||||| || |||||||||||||||||| | ||||||||| Sbjct: 1277 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagatttt 1336 Query: 1240 gggattctggttcgctcaggattcaccgtatctaaagccctatttttcaactttctctct 1299 || || ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1337 ggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctct 1396 Query: 1300 gcgttggttgctcttggtgggacagcactggcactttctttgggaacggatccaggacat 1359 |||||||||||||||| ||| |||||||||||| | |||||||||| |||||||| ||| Sbjct: 1397 gcgttggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcat 1456 Query: 1360 tcctctttgattgagggatttactgctggtggttttatttacattgctgtcgcgggagtc 1419 || ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 1457 tcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtc 1516 Query: 1420 ctcccacagatgcacgatcagagaactacgctaagcaactcaatgtgtcagttgactttc 1479 |||||| ||||| | ||||||| ||| || | | | ||| ||| ||||||| || | Sbjct: 1517 ctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttcc 1576 Query: 1480 ctgacaatgggaatgctggtggctcttggcatatctttggtagaatgat 1528 |||||||||||||||||||| || || ||||||||| | |||||||||| Sbjct: 1577 ctgacaatgggaatgctggttgccctcggcatatctctagtagaatgat 1625 Score = 305 bits (154), Expect = 3e-79 Identities = 342/404 (84%), Gaps = 8/404 (1%) Strand = Plus / Plus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 516 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 575 Query: 437 tcctcctcccagtaatcctgtttcaggggaaaccgtcgaaggccgttgtggatgcacttg 496 |||| |||||||||||| | || |||||||| ||||| ||| || | |||||| |||| Sbjct: 576 tcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttg 635 Query: 497 cagtgtttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgctt 556 | | || ||||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct: 636 ccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcct 695 Query: 557 ttggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcatt 616 ||||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||| Sbjct: 696 ttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcatt 755 Query: 617 cacatgcacactccctgaaagatctttctgttggcttgtctattttatttggcattgtaa 676 ||||||||||||| ||| ||||||||||| |||| |||||| || ||||||||||||| Sbjct: 756 cacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgt 815 Query: 677 tgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctcaaaaggggggtc 736 | |||||||| || || ||||||||||||||||| || ||||||||||| || ||| Sbjct: 816 ttttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggg---- 871 Query: 737 atagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 872 ---gctcatggcatgggccaccatcatcaccatcataaacgaca 912 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 361 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 408
>emb|CT831655.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244A18, full insert sequence Length = 2363 Score = 478 bits (241), Expect = e-131 Identities = 457/529 (86%) Strand = Plus / Plus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 1700 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 1759 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 1760 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 1819 Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| | ||||||| Sbjct: 1820 cataactttactgatgggatggccctagggagtgcttttctgctacatggttgtgttgga 1879 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagagattggagatttt 1239 |||||||| |||||| |||||||||| || |||||||||||||||||| | ||||||||| Sbjct: 1880 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagaggtcggagatttt 1939 Query: 1240 gggattctggttcgctcaggattcaccgtatctaaagccctatttttcaactttctctct 1299 || || ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1940 ggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaattttctctct 1999 Query: 1300 gcgttggttgctcttggtgggacagcactggcactttctttgggaacggatccaggacat 1359 || ||||||||||||| ||| |||||||||||| | |||||||||| |||||||| ||| Sbjct: 2000 gcattggttgctcttgctggaacagcactggcattgtctttgggaaaagatccagggcat 2059 Query: 1360 tcctctttgattgagggatttactgctggtggttttatttacattgctgtcgcgggagtc 1419 || ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 2060 tcttctttgattgagggattcactgctggtggctttatttatattgctgttgctggagtc 2119 Query: 1420 ctcccacagatgcacgatcagagaactacgctaagcaactcaatgtgtcagttgactttc 1479 |||||| ||||| | ||||||| ||| || | | | ||| ||| ||||||| || | Sbjct: 2120 ctcccagagatgaatgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttcc 2179 Query: 1480 ctgacaatgggaatgctggtggctcttggcatatctttggtagaatgat 1528 |||||||||||||||||||| || || ||||||||| | |||||||||| Sbjct: 2180 ctgacaatgggaatgctggttgccctcggcatatctctagtagaatgat 2228 Score = 315 bits (159), Expect = 3e-82 Identities = 347/409 (84%), Gaps = 8/409 (1%) Strand = Plus / Plus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 1119 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 1178 Query: 437 tcctcctcccagtaatcctgtttcaggggaaaccgtcgaaggccgttgtggatgcacttg 496 |||| |||||||||||| | || |||||||| ||||| ||| || | |||||| |||| Sbjct: 1179 tcctgctcccagtaatcttcttccaggggaagccgtccaagaccatggtggattgccttg 1238 Query: 497 cagtgtttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgctt 556 | | || ||||||||||| |||||||| |||||||||||||||||||| || ||||| | Sbjct: 1239 ccatcttcggggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcct 1298 Query: 557 ttggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcatt 616 ||||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||| Sbjct: 1299 ttggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcatt 1358 Query: 617 cacatgcacactccctgaaagatctttctgttggcttgtctattttatttggcattgtaa 676 ||||||||||||| ||| ||||||||||| |||| |||||| || ||||||||||||| Sbjct: 1359 cacatgcacactctctggaagatctttctattggtttgtctgttctatttggcattgtgt 1418 Query: 677 tgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctcaaaaggggggtc 736 |||||||||| || || ||||||||||||||||| || ||||||||||| || ||| Sbjct: 1419 tgttctttattgttgagaagattgtgaggtatgtggaagacaattctcagaaaggg---- 1474 Query: 737 atagctcaggtcatggg-caccatcatcaccatcataaacgacaagaca 784 ||||| | |||||| |||||||||||||||||||||||||| |||| Sbjct: 1475 ---gctcatggcatgggccaccatcatcaccatcataaacgacacgaca 1520 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 853 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 900
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 135 bits (68), Expect = 6e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 1231 ggagattttgggattctggttcgctcaggattcaccgtatctaaagccctatttttcaac 1290 ||||||||||| || ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 22982150 ggagattttggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaat 22982091 Query: 1291 tttctctctgcgttggttgctcttggtgggacagcactgg 1330 ||||||||||||||||||||||||| ||| |||||||||| Sbjct: 22982090 tttctctctgcgttggttgctcttgctggaacagcactgg 22982051 Score = 135 bits (68), Expect = 6e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 22983133 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 22983074 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagag 1227 |||||||| |||||| |||||||||| || |||||||||||||||||| Sbjct: 22983073 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagag 22983026 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 22983381 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 22983322 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 22983321 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 22983262 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 22987102 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 22987043 Query: 437 tcctcctcccagtaatc 453 |||| |||||||||||| Sbjct: 22987042 tcctgctcccagtaatc 22987026 Score = 95.6 bits (48), Expect = 5e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 1373 agggatttactgctggtggttttatttacattgctgtcgcgggagtcctcccacagatgc 1432 ||||||| ||||||||||| |||||||| |||||||| || |||||||||||| ||||| Sbjct: 22981270 agggattcactgctggtggctttatttatattgctgttgctggagtcctcccagagatga 22981211 Query: 1433 acgatcagagaactacgctaagcaactcaatgtgtcagttgactttcctgacaatgggaa 1492 | ||||||| ||| || | | | ||| ||| ||||||| || |||||||||||||| Sbjct: 22981210 atgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttccctgacaatgggaa 22981151 Query: 1493 tgctggtggctcttggcatatctttggtagaatgat 1528 ||||||| || || ||||||||| | |||||||||| Sbjct: 22981150 tgctggttgccctcggcatatctctagtagaatgat 22981115 Score = 93.7 bits (47), Expect = 2e-15 Identities = 86/99 (86%) Strand = Plus / Minus Query: 559 ggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcattca 618 ||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||||| Sbjct: 22985443 ggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcattca 22985384 Query: 619 catgcacactccctgaaagatctttctgttggcttgtct 657 ||||||||||| ||| ||||||||||| |||| |||||| Sbjct: 22985383 catgcacactctctggaagatctttctattggtttgtct 22985345 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 507 ggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||| |||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 22986248 ggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcctttggt 22986194 Score = 67.9 bits (34), Expect = 1e-07 Identities = 96/116 (82%), Gaps = 8/116 (6%) Strand = Plus / Minus Query: 665 ttggcattgtaatgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctc 724 |||||||||| | |||||||| || || ||||||||||||||||| || |||||||||| Sbjct: 22985042 ttggcattgtgtttttctttattgttgagaagattgtgaggtatgtggaagacaattctc 22984983 Query: 725 aaaaggggggtcatagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 | || ||| ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 22984982 agaaaggg-------gctcatggcatgggccaccatcatcaccatcataaacgaca 22984934 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1336 tctttgggaacggatccaggacattcctctttgattgagg 1375 |||||||||| |||||||| ||||| ||||||||||||| Sbjct: 22981968 tctttgggaaaagatccagggcattcttctttgattgagg 22981929 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Minus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 22987368 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 22987321
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 135 bits (68), Expect = 6e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 1231 ggagattttgggattctggttcgctcaggattcaccgtatctaaagccctatttttcaac 1290 ||||||||||| || ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 155988 ggagattttggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaat 155929 Query: 1291 tttctctctgcgttggttgctcttggtgggacagcactgg 1330 ||||||||||||||||||||||||| ||| |||||||||| Sbjct: 155928 tttctctctgcgttggttgctcttgctggaacagcactgg 155889 Score = 135 bits (68), Expect = 6e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 156971 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 156912 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagag 1227 |||||||| |||||| |||||||||| || |||||||||||||||||| Sbjct: 156911 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagag 156864 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 157219 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 157160 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 157159 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 157100 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 160940 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 160881 Query: 437 tcctcctcccagtaatc 453 |||| |||||||||||| Sbjct: 160880 tcctgctcccagtaatc 160864 Score = 95.6 bits (48), Expect = 5e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 1373 agggatttactgctggtggttttatttacattgctgtcgcgggagtcctcccacagatgc 1432 ||||||| ||||||||||| |||||||| |||||||| || |||||||||||| ||||| Sbjct: 155108 agggattcactgctggtggctttatttatattgctgttgctggagtcctcccagagatga 155049 Query: 1433 acgatcagagaactacgctaagcaactcaatgtgtcagttgactttcctgacaatgggaa 1492 | ||||||| ||| || | | | ||| ||| ||||||| || |||||||||||||| Sbjct: 155048 atgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttccctgacaatgggaa 154989 Query: 1493 tgctggtggctcttggcatatctttggtagaatgat 1528 ||||||| || || ||||||||| | |||||||||| Sbjct: 154988 tgctggttgccctcggcatatctctagtagaatgat 154953 Score = 93.7 bits (47), Expect = 2e-15 Identities = 86/99 (86%) Strand = Plus / Minus Query: 559 ggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcattca 618 ||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||||| Sbjct: 159281 ggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcattca 159222 Query: 619 catgcacactccctgaaagatctttctgttggcttgtct 657 ||||||||||| ||| ||||||||||| |||| |||||| Sbjct: 159221 catgcacactctctggaagatctttctattggtttgtct 159183 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 507 ggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||| |||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 160086 ggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcctttggt 160032 Score = 67.9 bits (34), Expect = 1e-07 Identities = 96/116 (82%), Gaps = 8/116 (6%) Strand = Plus / Minus Query: 665 ttggcattgtaatgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctc 724 |||||||||| | |||||||| || || ||||||||||||||||| || |||||||||| Sbjct: 158880 ttggcattgtgtttttctttattgttgagaagattgtgaggtatgtggaagacaattctc 158821 Query: 725 aaaaggggggtcatagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 | || ||| ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 158820 agaaaggg-------gctcatggcatgggccaccatcatcaccatcataaacgaca 158772 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1336 tctttgggaacggatccaggacattcctctttgattgagg 1375 |||||||||| |||||||| ||||| ||||||||||||| Sbjct: 155806 tctttgggaaaagatccagggcattcttctttgattgagg 155767 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Minus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 161206 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 161159
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 135 bits (68), Expect = 6e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 1231 ggagattttgggattctggttcgctcaggattcaccgtatctaaagccctatttttcaac 1290 ||||||||||| || ||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct: 41878 ggagattttggtatcctggtgcgctcaggattcactgtaactaaagccctatttttcaat 41819 Query: 1291 tttctctctgcgttggttgctcttggtgggacagcactgg 1330 ||||||||||||||||||||||||| ||| |||||||||| Sbjct: 41818 tttctctctgcgttggttgctcttgctggaacagcactgg 41779 Score = 135 bits (68), Expect = 6e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 1120 cataacttcactgacgggatggctcttggaagtgcttttctgctacatggatctgttgga 1179 |||||||| ||||| |||||||| || || |||||||||||||||||||| ||||||||| Sbjct: 42861 cataactttactgatgggatggccctagggagtgcttttctgctacatggttctgttgga 42802 Query: 1180 ggatggtctagaactttatttctgctcgctcatgaacttcctcaagag 1227 |||||||| |||||| |||||||||| || |||||||||||||||||| Sbjct: 42801 ggatggtcgagaactctatttctgcttgcacatgaacttcctcaagag 42754 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 1000 agagagcctatcaattctgaaactgatcctgccccgggcaaagcattatcgagtgaagac 1059 ||||||||| |||||||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 43109 agagagcctgtcaattctgaaagtgaccctgcccctaacaaagcattatcaagtgaagat 43050 Query: 1060 ccctctgtttcaaactccaaccttgtgtttggctacctcaatcttttctcagatggtgtt 1119 |||||||||| || || || | ||||| ||||||||||| |||||||||||||||||| Sbjct: 43049 tcctctgtttccaattcgaatatggtgttcggctacctcaaccttttctcagatggtgtt 42990 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 377 tgtggttgagagcgatggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctca 436 ||||| |||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 46830 tgtggctgagtgccatgggatgctcgcttctggtcagcatggcgtcgctcgtctgcctcg 46771 Query: 437 tcctcctcccagtaatc 453 |||| |||||||||||| Sbjct: 46770 tcctgctcccagtaatc 46754 Score = 95.6 bits (48), Expect = 5e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 1373 agggatttactgctggtggttttatttacattgctgtcgcgggagtcctcccacagatgc 1432 ||||||| ||||||||||| |||||||| |||||||| || |||||||||||| ||||| Sbjct: 40998 agggattcactgctggtggctttatttatattgctgttgctggagtcctcccagagatga 40939 Query: 1433 acgatcagagaactacgctaagcaactcaatgtgtcagttgactttcctgacaatgggaa 1492 | ||||||| ||| || | | | ||| ||| ||||||| || |||||||||||||| Sbjct: 40938 atgatcagaaaacaaccgtcaaaagctcgatgattcagttggtttccctgacaatgggaa 40879 Query: 1493 tgctggtggctcttggcatatctttggtagaatgat 1528 ||||||| || || ||||||||| | |||||||||| Sbjct: 40878 tgctggttgccctcggcatatctctagtagaatgat 40843 Score = 93.7 bits (47), Expect = 2e-15 Identities = 86/99 (86%) Strand = Plus / Minus Query: 559 ggtggagggcactctcattcacataatcatgaggaccatgatcatgctcaggagcattca 618 ||||||||||| |||||| ||||| ||||| || | ||| ||||| |||| ||||||||| Sbjct: 45171 ggtggagggcattctcatacacatgatcatcagaatcataatcattctcatgagcattca 45112 Query: 619 catgcacactccctgaaagatctttctgttggcttgtct 657 ||||||||||| ||| ||||||||||| |||| |||||| Sbjct: 45111 catgcacactctctggaagatctttctattggtttgtct 45073 Score = 69.9 bits (35), Expect = 3e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 507 ggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||| |||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 45976 ggcaggtgcgatgcttggggattcatttcttcatcaactgccacatgcctttggt 45922 Score = 67.9 bits (34), Expect = 1e-07 Identities = 96/116 (82%), Gaps = 8/116 (6%) Strand = Plus / Minus Query: 665 ttggcattgtaatgttctttatcgtcgaaaagattgtgaggtatgttgaggacaattctc 724 |||||||||| | |||||||| || || ||||||||||||||||| || |||||||||| Sbjct: 44770 ttggcattgtgtttttctttattgttgagaagattgtgaggtatgtggaagacaattctc 44711 Query: 725 aaaaggggggtcatagctcaggtcatggg-caccatcatcaccatcataaacgaca 779 | || ||| ||||| | |||||| |||||||||||||||||||||||||| Sbjct: 44710 agaaaggg-------gctcatggcatgggccaccatcatcaccatcataaacgaca 44662 Score = 48.1 bits (24), Expect = 0.11 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1336 tctttgggaacggatccaggacattcctctttgattgagg 1375 |||||||||| |||||||| ||||| ||||||||||||| Sbjct: 41696 tctttgggaaaagatccagggcattcttctttgattgagg 41657 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Minus Query: 252 gcggctgctaccggaggaactggccgaggaggcggatctcgagctcga 299 |||||| || || ||||| || || ||||||||||||||||||||||| Sbjct: 47096 gcggcttctccccgaggagctcgcggaggaggcggatctcgagctcga 47049
>dbj|AK229148.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-43-K01 Length = 1670 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1074 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1133 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1134 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1193 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1194 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1253 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1254 gtaacaaaagcactcttcttcaacttcctctctgc 1288 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 552 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 611 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 612 ggtggccactctca 625
>ref|NM_105480.2| Arabidopsis thaliana IAR1 (IAA-ALANINE RESISTANT 1); metal ion transporter (IAR1) mRNA, complete cds Length = 1674 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1088 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1147 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1148 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1207 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1208 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1267 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1268 gtaacaaaagcactcttcttcaacttcctctctgc 1302 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 566 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 625 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 626 ggtggccactctca 639
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| |||||||| ||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct: 13954556 atgggatgctcgcttctggtcagcatggcgtcgcccgtctgtctcgtcctgctcccagta 13954497 Query: 451 atc 453 ||| Sbjct: 13954496 atc 13954494 Score = 61.9 bits (31), Expect = 7e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| ||||| || ||||||||||||| |||||||||||| ||| |||| |||| |||| Sbjct: 28542037 atgggatgctcacttctggtcagcatggtgtcgctcgtctgtctcgtcctgctccaagta 28542096 Query: 451 atc 453 ||| Sbjct: 28542097 atc 28542099
>gb|AY084533.1| Arabidopsis thaliana clone 111031 mRNA, complete sequence Length = 1650 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1088 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1147 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1148 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1207 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1208 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1267 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1268 gtaacaaaagcactcttcttcaacttcctctctgc 1302 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 566 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 625 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 626 ggtggccactctca 639
>gb|AF216524.1|AF216524 Arabidopsis thaliana IAA-alanine resistance protein 1 mRNA, complete cds Length = 1526 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1017 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1076 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1077 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1136 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1137 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1196 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1197 gtaacaaaagcactcttcttcaacttcctctctgc 1231 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 495 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 554 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 555 ggtggccactctca 568
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| |||||||| ||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct: 126454 atgggatgctcgcttctggtcagcatggcgtcgcccgtctgtctcgtcctgctcccagta 126395 Query: 451 atc 453 ||| Sbjct: 126394 atc 126392
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B05 Length = 117057 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Minus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| |||||||| ||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct: 24194 atgggatgctcgcttctggtcagcatggcgtcgcccgtctgtctcgtcctgctcccagta 24135 Query: 451 atc 453 ||| Sbjct: 24134 atc 24132
>emb|BX814492.1|CNS0AC95 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1044 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1103 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1104 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1163 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1164 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1223 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1224 gtaacaaaagcactcttcttcaacttcctctctgc 1258 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 522 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 581 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 582 ggtggccactctca 595
>gb|BT001920.1| Arabidopsis thaliana clone C105449 unknown protein (At1g68100) mRNA, complete cds Length = 1441 Score = 77.8 bits (39), Expect = 1e-10 Identities = 171/215 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 967 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1026 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1027 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1086 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1087 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1146 Query: 1267 gtatctaaagccctatttttcaactttctctctgc 1301 ||| | ||||| || || |||||||| |||||||| Sbjct: 1147 gtaacaaaagcactcttcttcaacttcctctctgc 1181 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 445 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 504 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 505 ggtggccactctca 518
>emb|BX813543.1|CNS0AC0H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1483 Score = 67.9 bits (34), Expect = 1e-07 Identities = 163/206 (79%) Strand = Plus / Plus Query: 1087 tttggctacctcaatcttttctcagatggtgttcataacttcactgacgggatggctctt 1146 ||||| |||||||| | ||||| ||||||||||| || |||||||| || ||||| | Sbjct: 1001 tttggttacctcaacttgttctctgatggtgttcacaatttcactgatggaatggcatta 1060 Query: 1147 ggaagtgcttttctgctacatggatctgttggaggatggtctagaactttatttctgctc 1206 |||||||| ||||| | ||||||| ||||| || ||||| |||||| | ||| | || Sbjct: 1061 ggaagtgcgtttctcatctatggatcagttggtggttggtcaagaactatgtttttactt 1120 Query: 1207 gctcatgaacttcctcaagagattggagattttgggattctggttcgctcaggattcacc 1266 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct: 1121 gcccacgagcttccccaagagataggtgattttgggattctagtaagatcaggcttcaca 1180 Query: 1267 gtatctaaagccctatttttcaactt 1292 ||| | ||||| || || |||||||| Sbjct: 1181 gtaacaaaagcactcttcttcaactt 1206 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 478 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 537 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 538 ggtggccactctca 551
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 61.9 bits (31), Expect = 7e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| ||||| || ||||||||||||| |||||||||||| ||| |||| |||| |||| Sbjct: 6050 atgggatgctcacttctggtcagcatggtgtcgctcgtctgtctcgtcctgctccaagta 6109 Query: 451 atc 453 ||| Sbjct: 6110 atc 6112
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 61.9 bits (31), Expect = 7e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcccagta 450 ||||| ||||| || ||||||||||||| |||||||||||| ||| |||| |||| |||| Sbjct: 110878 atgggatgctcacttctggtcagcatggtgtcgctcgtctgtctcgtcctgctccaagta 110937 Query: 451 atc 453 ||| Sbjct: 110938 atc 110940
>gb|AY072108.1| Arabidopsis thaliana unknown protein (At1g68100) mRNA, complete cds Length = 1644 Score = 60.0 bits (30), Expect = 3e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 502 tttggggcaggtgcaatgcttggagattcatttcttcatcaactacctcatgcttttggt 561 ||||||||||| || ||| | |||||| | |||||||| ||||| || |||||||||||| Sbjct: 538 tttggggcaggagctatgttgggagatgcttttcttcaccaactgccccatgcttttggt 597 Query: 562 ggagggcactctca 575 || || |||||||| Sbjct: 598 ggtggccactctca 611 Score = 56.0 bits (28), Expect = 5e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 1166 atggatctgttggaggatggtctagaactttatttctgctcgctcatgaacttcctcaag 1225 ||||||| ||||| || ||||| |||||| | ||| | || || || || ||||| |||| Sbjct: 1143 atggatcagttggtggttggtcaagaactatgtttttacttgcccacgagcttccccaag 1202 Query: 1226 agattggagattttgggattctggttcgctcaggattcaccgtatctaaagccctatttt 1285 |||| || |||||||||||||| || | ||||| ||||| ||| | ||||| || || | Sbjct: 1203 agataggtgattttgggattctagtaagatcaggcttcacagtaacaaaagcactcttct 1262 Query: 1286 tcaactttctctctgc 1301 ||||||| |||||||| Sbjct: 1263 tcaacttcctctctgc 1278
>dbj|AK069517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F06, full insert sequence Length = 1518 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 391 atggggtgctcgctgctggtcagcatggcgtcgctcgtctgcctcatcctcctcc 445 ||||| ||||| || ||||||||||||| |||||||||||| ||| |||| |||| Sbjct: 49 atgggatgctcacttctggtcagcatggtgtcgctcgtctgtctcgtcctgctcc 103
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 310 cacgaccacgatcaccaccacgaccacatccacc 343 ||||||||||| ||| |||||||||||||||||| Sbjct: 883158 cacgaccacgaccacgaccacgaccacatccacc 883191 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 310 cacgaccacgatcaccaccacgaccacatccacc 343 ||||||||||| ||| |||||||||||| ||||| Sbjct: 509569 cacgaccacgagcacgaccacgaccacacccacc 509602
>ref|XM_502933.1| Yarrowia lipolytica CLIB122, YALI0D17248g predicted mRNA Length = 906 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccac 336 |||||||||||||||| ||||||||||| Sbjct: 672 ccacgaccacgatcacgaccacgaccac 699
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccac 336 |||||||||||||||| ||||||||||| Sbjct: 2123941 ccacgaccacgatcacgaccacgaccac 2123968
>ref|XM_416512.2| PREDICTED: Gallus gallus similar to leprecan-like 2 protein (LOC418289), mRNA Length = 2624 Score = 46.1 bits (23), Expect = 0.44 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 atggcgtcgctcgtctgcctcatcctcctcc 445 ||||| ||||||||||||||| ||||||||| Sbjct: 1 atggcctcgctcgtctgcctcctcctcctcc 31
>ref|XM_001196853.1| PREDICTED: Strongylocentrotus purpuratus similar to ENSANGP00000022179 (LOC580739), mRNA Length = 2426 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 ccacgatcaccaccacgaccac 336 |||||||||||||||||||||| Sbjct: 1718 ccacgatcaccaccacgaccac 1697
>ref|XM_780777.2| PREDICTED: Strongylocentrotus purpuratus similar to ENSANGP00000022179 (LOC580739), mRNA Length = 2426 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 ccacgatcaccaccacgaccac 336 |||||||||||||||||||||| Sbjct: 1718 ccacgatcaccaccacgaccac 1697
>ref|NM_001062872.1| Oryza sativa (japonica cultivar-group) Os05g0565200 (Os05g0565200) mRNA, complete cds Length = 1166 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 51 ccacgaccacgaccaccaccaccaccacagccac 84
>gb|CP000434.1| Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence Length = 332361 Score = 44.1 bits (22), Expect = 1.8 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 gcccacgaccacgatcaccaccacgaccac 336 |||||||||||||| ||| ||||||||||| Sbjct: 234647 gcccacgaccacgaccacgaccacgaccac 234676
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 135382 ccacgaccacgaccaccaccaccaccacagccac 135415
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 777 acaagacattagtggcataaaa 798 |||||||||||||||||||||| Sbjct: 41163 acaagacattagtggcataaaa 41142
>gb|AC009992.7|ATAC009992 Arabidopsis thaliana chromosome III BAC T4P3 genomic sequence, complete sequence Length = 96583 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Minus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||| |||||||||||| |||| Sbjct: 90297 ccacgaccacgaccacgaccacgaccacaaccac 90264
>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154492 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 957 tggtgagcagaagaggagctcttcca 982 |||||||||| ||||||||||||||| Sbjct: 7190 tggtgagcagcagaggagctcttcca 7215
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 754 caccatcatcaccatcataaac 775 |||||||||||||||||||||| Sbjct: 122952 caccatcatcaccatcataaac 122973 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 754 caccatcatcaccatcataaac 775 |||||||||||||||||||||| Sbjct: 122989 caccatcatcaccatcataaac 123010
>ref|XM_803710.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504085.10) partial mRNA Length = 1594 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1305 ggttgctcttggtgggacagca 1326 |||||||||||||||||||||| Sbjct: 139 ggttgctcttggtgggacagca 160
>gb|AC114477.2| Homo sapiens chromosome 3 clone RP11-1037D22, complete sequence Length = 179190 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 957 tggtgagcagaagaggagctcttcca 982 |||||||||| ||||||||||||||| Sbjct: 113354 tggtgagcagcagaggagctcttcca 113379
>ref|XM_813684.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507089.90) partial mRNA Length = 1923 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1305 ggttgctcttggtgggacagca 1326 |||||||||||||||||||||| Sbjct: 465 ggttgctcttggtgggacagca 486
>ref|XM_812442.1| Trypanosoma cruzi strain CL Brener mucin TcMUCII (Tc00.1047053506139.100) partial mRNA Length = 582 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 311 acgaccacgatcaccaccacgaccac 336 |||||||||| ||||||||||||||| Sbjct: 412 acgaccacgaccaccaccacgaccac 437
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 27904965 ccacgaccacgaccaccaccaccaccacagccac 27904998
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 777 acaagacattagtggcataaaa 798 |||||||||||||||||||||| Sbjct: 26058066 acaagacattagtggcataaaa 26058087
>gb|AC012327.6|AC012327 Arabidopsis thaliana chromosome 3 BAC T14A11 genomic sequence, complete sequence Length = 86585 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||| |||||||||||| |||| Sbjct: 83862 ccacgaccacgaccacgaccacgaccacaaccac 83895
>ref|XM_957023.1| Neurospora crassa OR74A hypothetical protein (NCU07262.1) partial mRNA Length = 1815 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||| |||||||||||| |||| Sbjct: 306 ccacgaccacgaacacgaccacgaccacagccac 339
>dbj|AK104368.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E04, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 42 ccacgaccacgaccaccaccaccaccacagccac 75
>dbj|AK104200.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B01, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 42 ccacgaccacgaccaccaccaccaccacagccac 75
>dbj|AK067090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095M05, full insert sequence Length = 1167 Score = 44.1 bits (22), Expect = 1.8 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccacatccac 342 |||||||||||| ||||||||| |||||| |||| Sbjct: 52 ccacgaccacgaccaccaccaccaccacagccac 85
>ref|XM_001226183.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10917) mRNA, complete cds Length = 1626 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccaccacgaccaca 337 |||||||||||| ||||||||| |||||| Sbjct: 56 ccacgaccacgaccaccaccaccaccaca 84
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 ccggaggaactggccgaggag 282 ||||||||||||||||||||| Sbjct: 3425637 ccggaggaactggccgaggag 3425657
>ref|XM_001126005.1| PREDICTED: Homo sapiens hypothetical protein LOC730474 (LOC730474), mRNA Length = 585 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 308 cccacgaccacgatcaccaccacgaccac 336 ||||||||||| ||||||||||| ||||| Sbjct: 166 cccacgaccaccatcaccaccaccaccac 194
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 tctcctccccctgctgctcct 59 ||||||||||||||||||||| Sbjct: 7924141 tctcctccccctgctgctcct 7924161
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 308 cccacgaccacgatcaccaccacgaccac 336 ||||||||||||| |||| |||||||||| Sbjct: 4854296 cccacgaccacgagcacccccacgaccac 4854324
>gb|AC189555.1| Brassica rapa subsp. pekinensis clone KBrH006E24, complete sequence Length = 135735 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 751 gggcaccatcatcaccatcataaac 775 |||| |||||||||||||||||||| Sbjct: 45580 gggctccatcatcaccatcataaac 45556
>ref|XM_001088766.1| PREDICTED: Macaca mulatta similar to jumonji domain containing 2D (LOC700412), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 309 ccacgaccacgatcaccaccacgaccaca 337 |||||||||||| ||| |||||||||||| Sbjct: 1340 ccacgaccacgaccacgaccacgaccaca 1312
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ccacgaccacgatcaccacca 329 ||||||||||||||||||||| Sbjct: 1467465 ccacgaccacgatcaccacca 1467485
>emb|BX901879.18| Zebrafish DNA sequence from clone CH211-226N2 in linkage group 7, complete sequence Length = 152392 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 751 gggcaccatcatcaccatcat 771 ||||||||||||||||||||| Sbjct: 102508 gggcaccatcatcaccatcat 102528
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 309 ccacgaccacgatcaccaccacgaccaca 337 |||||||||||| ||| |||||||||||| Sbjct: 247343 ccacgaccacgaccacgaccacgaccaca 247315
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ggggagccccacgagcaccat 156 ||||||||||||||||||||| Sbjct: 848222 ggggagccccacgagcaccat 848242
>gb|AY552332.1| Danio rerio dishevelled 2 (dvl2) mRNA, complete cds Length = 2244 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 751 gggcaccatcatcaccatcat 771 ||||||||||||||||||||| Sbjct: 2031 gggcaccatcatcaccatcat 2011
>ref|XM_535853.2| PREDICTED: Canis familiaris similar to Neuroserpin precursor (Serpin I1) (Protease inhibitor 12) (LOC478684), mRNA Length = 1850 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ctcctccccctgctgctcctg 60 ||||||||||||||||||||| Sbjct: 183 ctcctccccctgctgctcctg 163
>gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 747 tcatgggcaccatcatcaccatcat 771 |||||| |||||||||||||||||| Sbjct: 62760 tcatggtcaccatcatcaccatcat 62736
>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete sequence Length = 229220 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 acttgcagtgtttggggcagg 512 ||||||||||||||||||||| Sbjct: 103988 acttgcagtgtttggggcagg 103968
>gb|AC002069.2| Homo sapiens BAC clone CTA-326K9 from 7, complete sequence Length = 158537 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1681 tcatcagtacaatttgatatt 1701 ||||||||||||||||||||| Sbjct: 23779 tcatcagtacaatttgatatt 23799
>gb|AC128768.4| Rattus norvegicus 1 BAC CH230-445L3 (Children's Hospital Oakland Research Institute) complete sequence Length = 156228 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 872 atgccaaaaatgagaaagagt 892 ||||||||||||||||||||| Sbjct: 35132 atgccaaaaatgagaaagagt 35112
>ref|NM_212648.1| Danio rerio dishevelled, dsh homolog 2 (Drosophila) (dvl2), mRNA gb|BC044381.1| Danio rerio dishevelled, dsh homolog 2 (Drosophila), mRNA (cDNA clone MGC:55372 IMAGE:2601872), complete cds Length = 2604 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 751 gggcaccatcatcaccatcat 771 ||||||||||||||||||||| Sbjct: 2110 gggcaccatcatcaccatcat 2090
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 6.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 308 cccacgaccacgatcaccaccacgaccac 336 ||||||||||||| ||| ||||||||||| Sbjct: 1215574 cccacgaccacgaccacgaccacgaccac 1215602
>gb|AC012588.14| Homo sapiens chromosome 18, clone RP11-17A19, complete sequence Length = 148738 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 952 atgcctggtgagcagaagaggagct 976 |||||||| |||||||||||||||| Sbjct: 8847 atgcctggagagcagaagaggagct 8823
>gb|AC090206.7| Homo sapiens chromosome 18, clone RP11-349H17, complete sequence Length = 91609 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 952 atgcctggtgagcagaagaggagct 976 |||||||| |||||||||||||||| Sbjct: 30677 atgcctggagagcagaagaggagct 30653
>ref|XM_753960.1| Ustilago maydis 521 hypothetical protein (UM02906.1) partial mRNA Length = 1467 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 cgaccacgatcaccaccacgaccac 336 ||||||||||||| ||||||||||| Sbjct: 903 cgaccacgatcacgaccacgaccac 927
>emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in linkage group 7, complete sequence Length = 217684 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 751 gggcaccatcatcaccatcat 771 ||||||||||||||||||||| Sbjct: 24954 gggcaccatcatcaccatcat 24934
>ref|XM_800756.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506915.20) partial mRNA Length = 2286 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 tctgccgtctcctccccctgctgct 56 ||||||||||||||||| ||||||| Sbjct: 44 tctgccgtctcctccccttgctgct 20
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 actacctcatgcttttggtgg 563 ||||||||||||||||||||| Sbjct: 2966608 actacctcatgcttttggtgg 2966588
>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence Length = 174550 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1060 ccctctgtttcaaactccaaccttg 1084 |||||||| |||||||||||||||| Sbjct: 124898 ccctctgtctcaaactccaaccttg 124922
>emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on chromosome 13q12.1-12.3, complete sequence Length = 186343 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1662 taagttagtttcacttgcatcatca 1686 ||||||||||| ||||||||||||| Sbjct: 88383 taagttagttttacttgcatcatca 88407
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1681 tcatcagtacaatttgatatt 1701 ||||||||||||||||||||| Sbjct: 64900 tcatcagtacaatttgatatt 64920
>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence Length = 94287 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 cttcgacggcggccacgacggggag 141 |||||| |||||||||||||||||| Sbjct: 2835 cttcgaaggcggccacgacggggag 2811
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cgcccacgaccacgatcaccaccac 330 |||||||||||||| |||||||||| Sbjct: 8403052 cgcccacgaccacgctcaccaccac 8403028
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 42.1 bits (21), Expect = 6.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 acgaccacgatcaccaccacgaccacatccacc 343 |||||||| ||||||||||| |||||| ||||| Sbjct: 106218 acgaccaccatcaccaccaccaccacaaccacc 106186
>emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chromosome 2, complete sequence Length = 164324 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 acttgcagtgtttggggcagg 512 ||||||||||||||||||||| Sbjct: 35881 acttgcagtgtttggggcagg 35901
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone BACR31D05, complete sequence Length = 172633 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 tctcctccccctgctgctcct 59 ||||||||||||||||||||| Sbjct: 132622 tctcctccccctgctgctcct 132642
>gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, complete sequence Length = 176248 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1060 ccctctgtttcaaactccaaccttg 1084 |||||||| |||||||||||||||| Sbjct: 95566 ccctctgtctcaaactccaaccttg 95590
>gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, complete sequence Length = 183931 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 747 tcatgggcaccatcatcaccatcat 771 |||||| |||||||||||||||||| Sbjct: 69830 tcatggtcaccatcatcaccatcat 69854 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 747 tcatgggcaccatcatcaccatcat 771 |||||| |||||||||||||||||| Sbjct: 70220 tcatggtcaccatcatcaccatcat 70244
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 6.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 actacctcatgcttttggtgg 563 ||||||||||||||||||||| Sbjct: 1329491 actacctcatgcttttggtgg 1329511
>emb|CR761401.2| Xenopus tropicalis finished cDNA, clone TEgg060j21 Length = 1061 Score = 42.1 bits (21), Expect = 6.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 ctcctccccctgctgctcctggcca 64 ||||||||||||||||| ||||||| Sbjct: 138 ctcctccccctgctgctgctggcca 114 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 337,081,145 Number of extensions: 18222415 Number of successful extensions: 396600 Number of sequences better than 10.0: 83 Number of HSP's gapped: 396589 Number of HSP's successfully gapped: 148 Length of query: 1817 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1794 Effective length of database: 18,503,978,556 Effective search space: 33196137529464 Effective search space used: 33196137529464 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
