ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51f23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os09g0473900:Os09g0473900 90 3e-18
2AK110869:Os08g0487000 80 2e-15
3AK103460:Os08g0487000 80 2e-15
4AK065535:Os12g0577600 30 2.2
5Os07g0453000:Os07g0453000 30 2.9
6AK110903:Os03g0726200 30 2.9
7AK108464:Os01g0198500 29 5.0
8AK062291: 28 8.5

>Os09g0473900:Os09g0473900 |
          Length = 1685
 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 46/89 (51%), Positives = 58/89 (65%)
 Frame = +2

Query: 491  GKIFEEVTIVEGETIHSSRWPCTSSYANPVNFLREKNNHERRXXXXXXXXXXXXXXXXXV 670
            G +FEE+T VEGETI SSRWPCT S+A+PVNF R+KN+HER                   
Sbjct: 1599 GNVFEEIT-VEGETIQSSRWPCTRSFADPVNFFRDKNSHERSDSPSLTADSAAKNNSPR- 1656

Query: 671  VAEAAPKNNAVVSATENNLTPSKREASKE 757
              +++PKN+A   ATENNLTP KR+ SK+
Sbjct: 1657 -TDSSPKNSASALATENNLTPGKRQPSKK 1684



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>AK110869:Os08g0487000 |
          Length = 157

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 335 GAMLTVKSEPATAMDAVGESEIEEHEQKVNRYQAELAARIKAKYFSNKASDGGKIFEEVT 514
           GA    +S P  +     E E  EHE+KVN+YQA LAAR+KAKYFS KA     +FEE+T
Sbjct: 40  GASNAQESRPRVSPAENSEVETREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMT 99

Query: 515 IVEGETIHSSRWPCTSSYANPVNFLREKN 601
           I + ETI  SR P +S +A+P  F REK+
Sbjct: 100 I-QSETILLSRCPFSSLFADPAKFCREKS 127



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>AK103460:Os08g0487000 |
          Length = 157

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 335 GAMLTVKSEPATAMDAVGESEIEEHEQKVNRYQAELAARIKAKYFSNKASDGGKIFEEVT 514
           GA    +S P  +     E E  EHE+KVN+YQA LAAR+KAKYFS KA     +FEE+T
Sbjct: 40  GASNAQESRPRVSPAENSEVETREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMT 99

Query: 515 IVEGETIHSSRWPCTSSYANPVNFLREKN 601
           I + ETI  SR P +S +A+P  F REK+
Sbjct: 100 I-QSETILLSRCPFSSLFADPAKFCREKS 127



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>AK065535:Os12g0577600 |
          Length = 565

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 776 LPLPIRSPWMPLSWKVLDCFLLPKQLHYSLARLQLPQMN-NRSWQRNLLLKMENPSSHGC 600
           LP P  SP+ P+    +D F+ P+++H+    ++LP    +      L++ ++ P+    
Sbjct: 330 LPAPGSSPYTPIG---VDMFMSPRKIHHIAQHIELPSAGPSEKIPSLLIVNIQMPTYPTA 386

Query: 599 SSLGENSQGSHTNLCMATCLN 537
             LG+ S G   +L +   LN
Sbjct: 387 MFLGD-SDGEGISLVLYFKLN 406



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>Os07g0453000:Os07g0453000 |
          Length = 1079

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 90  FGLPHTPHFASP-ALRDSAPLAPLRRSSP 173
           F  PHTP   SP A + S+P +PLR++SP
Sbjct: 496 FPAPHTPPAHSPGASQGSSPASPLRQASP 524



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>AK110903:Os03g0726200 |
          Length = 216

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/120 (20%), Positives = 41/120 (34%)
 Frame = -2

Query: 447 AASSAWYLFTFCSCSSISDSPTASIAVAGSDLTVSMAPQCPAERRRTS*TSAATGARKKR 268
           ++ S WY+F   S +    S      ++ + L+  ++P+ P+   R     AA GA    
Sbjct: 85  SSGSHWYIFLLSSSNLSFFSQAVLSQLSSTTLSSELSPEAPSGGGRRRQRRAAHGALPSS 144

Query: 267 IEPGWVPTSRRSSATGEKKPATGLTGRNSSGVASFXXXXXXXXXXXXXXXRSAGCGEGRR 88
           +  G      R     +   A G   R+ S  +                   AG   GRR
Sbjct: 145 VHNGGAGQIERRRCWADVAAALGEAARSGSSSSVATRARPERQLGSQIQVGLAGSSRGRR 204



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>AK108464:Os01g0198500 |
          Length = 237

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -1

Query: 337 SSMPGRTPQNLLNVSRHGSPQETNRARMGTDFP-PVQ 230
           SSMPG TP  LL +S   SP  T + R+ TD P PV+
Sbjct: 162 SSMPGATPSPLLALSLGRSPAGTRQLRV-TDSPFPVE 197



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>AK062291: |
          Length = 370

 Score = 28.5 bits (62), Expect = 8.5
 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = -2

Query: 492 PPSEALLEKYLALMRAASSAWYLFTFCSCSSISDSPTASIAVAGSDLTVSMAPQCPAERR 313
           P S A       +   AS AW L ++ S   +  SPT    V  ++ TVS   +   +++
Sbjct: 34  PTSSASSSTTPPVTTTASPAWRLVSWTSAPPVGSSPTCPPTVQLAETTVSHELR---QQK 90

Query: 312 RTS*TSAATGARKKRIEPGWVPTSR--RSSATGEKKPATGLTGRNSSG 175
                    G   +     W  +SR  R SAT   +P +    R +SG
Sbjct: 91  HIDRDEKYCGLYTRAETSAWEGSSRRWRKSATATARPCS--ARRTTSG 136


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,197,145
Number of extensions: 683948
Number of successful extensions: 2189
Number of sequences better than 10.0: 8
Number of HSP's gapped: 2182
Number of HSP's successfully gapped: 8
Length of query: 356
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 254
Effective length of database: 11,315,673
Effective search space: 2874180942
Effective search space used: 2874180942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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