| Clone Name | FLbaf51f23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os09g0473900:Os09g0473900 | 90 | 3e-18 | 2 | AK110869:Os08g0487000 | 80 | 2e-15 | 3 | AK103460:Os08g0487000 | 80 | 2e-15 | 4 | AK065535:Os12g0577600 | 30 | 2.2 | 5 | Os07g0453000:Os07g0453000 | 30 | 2.9 | 6 | AK110903:Os03g0726200 | 30 | 2.9 | 7 | AK108464:Os01g0198500 | 29 | 5.0 | 8 | AK062291: | 28 | 8.5 |
|---|
>Os09g0473900:Os09g0473900 | Length = 1685 Score = 89.7 bits (221), Expect = 3e-18 Identities = 46/89 (51%), Positives = 58/89 (65%) Frame = +2 Query: 491 GKIFEEVTIVEGETIHSSRWPCTSSYANPVNFLREKNNHERRXXXXXXXXXXXXXXXXXV 670 G +FEE+T VEGETI SSRWPCT S+A+PVNF R+KN+HER Sbjct: 1599 GNVFEEIT-VEGETIQSSRWPCTRSFADPVNFFRDKNSHERSDSPSLTADSAAKNNSPR- 1656 Query: 671 VAEAAPKNNAVVSATENNLTPSKREASKE 757 +++PKN+A ATENNLTP KR+ SK+ Sbjct: 1657 -TDSSPKNSASALATENNLTPGKRQPSKK 1684
>AK110869:Os08g0487000 | Length = 157 Score = 80.5 bits (197), Expect = 2e-15 Identities = 45/89 (50%), Positives = 57/89 (64%) Frame = +2 Query: 335 GAMLTVKSEPATAMDAVGESEIEEHEQKVNRYQAELAARIKAKYFSNKASDGGKIFEEVT 514 GA +S P + E E EHE+KVN+YQA LAAR+KAKYFS KA +FEE+T Sbjct: 40 GASNAQESRPRVSPAENSEVETREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMT 99 Query: 515 IVEGETIHSSRWPCTSSYANPVNFLREKN 601 I + ETI SR P +S +A+P F REK+ Sbjct: 100 I-QSETILLSRCPFSSLFADPAKFCREKS 127
>AK103460:Os08g0487000 | Length = 157 Score = 80.5 bits (197), Expect = 2e-15 Identities = 45/89 (50%), Positives = 57/89 (64%) Frame = +2 Query: 335 GAMLTVKSEPATAMDAVGESEIEEHEQKVNRYQAELAARIKAKYFSNKASDGGKIFEEVT 514 GA +S P + E E EHE+KVN+YQA LAAR+KAKYFS KA +FEE+T Sbjct: 40 GASNAQESRPRVSPAENSEVETREHEEKVNKYQAVLAARLKAKYFSGKAFGKENVFEEMT 99 Query: 515 IVEGETIHSSRWPCTSSYANPVNFLREKN 601 I + ETI SR P +S +A+P F REK+ Sbjct: 100 I-QSETILLSRCPFSSLFADPAKFCREKS 127
>AK065535:Os12g0577600 | Length = 565 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -3 Query: 776 LPLPIRSPWMPLSWKVLDCFLLPKQLHYSLARLQLPQMN-NRSWQRNLLLKMENPSSHGC 600 LP P SP+ P+ +D F+ P+++H+ ++LP + L++ ++ P+ Sbjct: 330 LPAPGSSPYTPIG---VDMFMSPRKIHHIAQHIELPSAGPSEKIPSLLIVNIQMPTYPTA 386 Query: 599 SSLGENSQGSHTNLCMATCLN 537 LG+ S G +L + LN Sbjct: 387 MFLGD-SDGEGISLVLYFKLN 406
>Os07g0453000:Os07g0453000 | Length = 1079 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +3 Query: 90 FGLPHTPHFASP-ALRDSAPLAPLRRSSP 173 F PHTP SP A + S+P +PLR++SP Sbjct: 496 FPAPHTPPAHSPGASQGSSPASPLRQASP 524
>AK110903:Os03g0726200 | Length = 216 Score = 30.0 bits (66), Expect = 2.9 Identities = 25/120 (20%), Positives = 41/120 (34%) Frame = -2 Query: 447 AASSAWYLFTFCSCSSISDSPTASIAVAGSDLTVSMAPQCPAERRRTS*TSAATGARKKR 268 ++ S WY+F S + S ++ + L+ ++P+ P+ R AA GA Sbjct: 85 SSGSHWYIFLLSSSNLSFFSQAVLSQLSSTTLSSELSPEAPSGGGRRRQRRAAHGALPSS 144 Query: 267 IEPGWVPTSRRSSATGEKKPATGLTGRNSSGVASFXXXXXXXXXXXXXXXRSAGCGEGRR 88 + G R + A G R+ S + AG GRR Sbjct: 145 VHNGGAGQIERRRCWADVAAALGEAARSGSSSSVATRARPERQLGSQIQVGLAGSSRGRR 204
>AK108464:Os01g0198500 | Length = 237 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 337 SSMPGRTPQNLLNVSRHGSPQETNRARMGTDFP-PVQ 230 SSMPG TP LL +S SP T + R+ TD P PV+ Sbjct: 162 SSMPGATPSPLLALSLGRSPAGTRQLRV-TDSPFPVE 197
>AK062291: | Length = 370 Score = 28.5 bits (62), Expect = 8.5 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 2/108 (1%) Frame = -2 Query: 492 PPSEALLEKYLALMRAASSAWYLFTFCSCSSISDSPTASIAVAGSDLTVSMAPQCPAERR 313 P S A + AS AW L ++ S + SPT V ++ TVS + +++ Sbjct: 34 PTSSASSSTTPPVTTTASPAWRLVSWTSAPPVGSSPTCPPTVQLAETTVSHELR---QQK 90 Query: 312 RTS*TSAATGARKKRIEPGWVPTSR--RSSATGEKKPATGLTGRNSSG 175 G + W +SR R SAT +P + R +SG Sbjct: 91 HIDRDEKYCGLYTRAETSAWEGSSRRWRKSATATARPCS--ARRTTSG 136 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,197,145 Number of extensions: 683948 Number of successful extensions: 2189 Number of sequences better than 10.0: 8 Number of HSP's gapped: 2182 Number of HSP's successfully gapped: 8 Length of query: 356 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 254 Effective length of database: 11,315,673 Effective search space: 2874180942 Effective search space used: 2874180942 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)