ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51f23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P77509:YPHE_ECOLI Uncharacterized ABC transporter ATP-binding pr... 35 0.53
2Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sa... 33 2.6
3Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - ... 32 3.4
4Q7TPK6:WNK4_RAT Serine/threonine-protein kinase WNK4 - Rattus no... 31 7.6
5Q80UE6:WNK4_MOUSE Serine/threonine-protein kinase WNK4 - Mus mus... 31 7.6
6P33890:TIR2_YEAST Cold shock-induced protein TIR2 precursor - Sa... 31 10.0

>P77509:YPHE_ECOLI Uncharacterized ABC transporter ATP-binding protein yphE -|
           Escherichia coli
          Length = 503
 Score = 35.0 bits (79), Expect = 0.53
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
 Frame = +2

Query: 173 TPEEFLPVSPVAG----FFSPVALDRREVGTHPGSIRFLRAPVAADVQEVLRRSAGH*GA 340
           T  E +PV+ V      +   VALD      + G +R L     A    ++R        
Sbjct: 3   TATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIR-------- 54

Query: 341 MLTVKSEPATAMDAVGESEIEEHEQKVNRYQAELAARIKAKYFSNKASDGGKIFEEVTIV 520
           MLT    P +    +GE+ +E  E  + R  AEL  R               +++E+++V
Sbjct: 55  MLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVR--------------AVYQELSLV 100

Query: 521 EGETIHSS----RWP 553
           EG T+  +    +WP
Sbjct: 101 EGLTVAENLCLGQWP 115



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>Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sapiens (Human)|
          Length = 1243

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 297  SAATGARKKRIEPGWVPTSRRSSATGEKKPATGLTGRNS 181
            +A   +R++R+  G  PTSRR+S    + P  G+  RNS
Sbjct: 1179 AAMLSSRQRRLSKGSFPTSRRNSLQRSEPPGPGIMRRNS 1217



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>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus|
            haemolyticus (strain JCSC1435)
          Length = 3608

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 31/121 (25%), Positives = 57/121 (47%)
 Frame = -2

Query: 531  VSPSTIVTSSKIFPPSEALLEKYLALMRAASSAWYLFTFCSCSSISDSPTASIAVAGSDL 352
            +S ST  + S     S +L E     +  ++SA    +  + +S+SDS +AS +++GS+ 
Sbjct: 2513 LSASTSTSVSDSTSTSTSLSESTSTSLSDSASASTSLSDSASTSVSDSTSASTSLSGSES 2572

Query: 351  TVSMAPQCPAERRRTS*TSAATGARKKRIEPGWVPTSRRSSATGEKKPATGLTGRNSSGV 172
            T S++    A    ++ TS +            V TS  +S +     +T L+G  S+ V
Sbjct: 2573 T-SLSDSASASTSLSASTSTSVSDSTSTSTSDSVSTS--TSMSDSTSMSTSLSGSTSTSV 2629

Query: 171  A 169
            +
Sbjct: 2630 S 2630



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>Q7TPK6:WNK4_RAT Serine/threonine-protein kinase WNK4 - Rattus norvegicus (Rat)|
          Length = 1222

 Score = 31.2 bits (69), Expect = 7.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 297  SAATGARKKRIEPGWVPTSRRSSATGEKKPATGLTGRNS 181
            +A    R++R+  G  PTSRR+S      P  G+  RNS
Sbjct: 1158 AAMLSCRQRRLSKGSFPTSRRNSLQRSDLPGPGIMRRNS 1196



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>Q80UE6:WNK4_MOUSE Serine/threonine-protein kinase WNK4 - Mus musculus (Mouse)|
          Length = 1222

 Score = 31.2 bits (69), Expect = 7.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 297  SAATGARKKRIEPGWVPTSRRSSATGEKKPATGLTGRNS 181
            +A    R++R+  G  PTSRR+S      P  G+  RNS
Sbjct: 1158 AAMLSCRQRRLSKGSFPTSRRNSLQRSDLPGPGIMRRNS 1196



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>P33890:TIR2_YEAST Cold shock-induced protein TIR2 precursor - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 251

 Score = 30.8 bits (68), Expect = 10.0
 Identities = 33/114 (28%), Positives = 48/114 (42%)
 Frame = -2

Query: 507 SSKIFPPSEALLEKYLALMRAASSAWYLFTFCSCSSISDSPTASIAVAGSDLTVSMAPQC 328
           SS++ P  E+LL        AASS        S +  S S T S AVA S    S A   
Sbjct: 99  SSRLLPELESLLGTSTT---AASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVAS 155

Query: 327 PAERRRTS*TSAATGARKKRIEPGWVPTSRRSSATGEKKPATGLTGRNSSGVAS 166
            +E   ++ TS+A  +  +        +++ +S+T     A       SS VAS
Sbjct: 156 SSEASSSAATSSAVASSSEATSSTVASSTKAASSTKASSSAV------SSAVAS 203


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 183,102,103
Number of extensions: 3932528
Number of successful extensions: 11017
Number of sequences better than 10.0: 6
Number of HSP's gapped: 11003
Number of HSP's successfully gapped: 6
Length of query: 356
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 242
Effective length of database: 69,416,809
Effective search space: 16798867778
Effective search space used: 16798867778
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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