ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53k03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065242:Os07g0570700 354 7e-98
2AK072486:Os04g0490400 113 3e-25
3AK121776:Os11g0518900 33 0.29
4AK102677:Os11g0518900 33 0.29
5AK063772:Os11g0518900 33 0.29
6Os07g0119700:Os07g0119700 30 4.2
7AK120668:Os01g0848300 28 9.4

>AK065242:Os07g0570700 |
          Length = 266
 Score =  354 bits (908), Expect = 7e-98
 Identities = 187/256 (73%), Positives = 207/256 (80%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3   APPPRALSSA-RLPQRPGCGCLSNRSSLLSSPTNFMKIQSXXXXXXXXPLVLQHSDKRAV 179
           A PPRALSSA R+PQRPGC  +  R ++LSS TNFM +++        PL+LQ+SDKRAV
Sbjct: 13  AAPPRALSSAARVPQRPGC--VPERPNILSSSTNFMSLRAGPMRFYSRPLILQNSDKRAV 70

Query: 180 LRHXXXXXXXXXXXXXXXXXXXKMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPV 359
           LRH                   +MEKAIETVQ+NFNTVRTGRANP+MLDRIEVEYYGTPV
Sbjct: 71  LRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPV 130

Query: 360 NLKTIAQVNTPDATSLLIQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDH 539
           NLK+IAQ+NTPDATSLLIQPYDKS LKLIEK IVAAN+GVTPSNDGEVIRVTVPPLTSD 
Sbjct: 131 NLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDR 190

Query: 540 RKEMTKTVAKLSEEGKVAIRNIRRDAIKAYDXXXXXXXXSEDNVKDLSADLQKITDEYMK 719
           RKE+ KTVAKL+EEGKVAIRNIRRDAIKAYD        SEDNVKDLSADLQK+TDEYMK
Sbjct: 191 RKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMK 250

Query: 720 KVEAIQKQKEQELSKV 767
           K+EAIQKQKEQEL K+
Sbjct: 251 KIEAIQKQKEQELMKI 266



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>AK072486:Os04g0490400 |
          Length = 260

 Score =  113 bits (282), Expect = 3e-25
 Identities = 61/172 (35%), Positives = 102/172 (59%)
 Frame = +3

Query: 246 KMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPVNLKTIAQVNTPDATSLLIQPYD 425
           +ME A+  +    + +RTGRA+P MLD I VE  G  V L  +A V+  DA +L + PYD
Sbjct: 89  QMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYD 148

Query: 426 KSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDHRKEMTKTVAKLSEEGKVAIRNI 605
            S +K IE AI+++ +G+ P+ DG  I   +PPLT ++ + + K V K +E+ K +IR  
Sbjct: 149 PSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRA 208

Query: 606 RRDAIKAYDXXXXXXXXSEDNVKDLSADLQKITDEYMKKVEAIQKQKEQELS 761
           R+ A+             +D+VK L  +++++T +++K  + + K KE+E+S
Sbjct: 209 RQKALDT--IKKSASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEIS 258



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>AK121776:Os11g0518900 |
          Length = 977

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -1

Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297
           IC +   ++++E  L++ L +K S++        L   VYR+ +VL++N   H   C PS
Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401

Query: 296 PH--GIEVRLNCFNGL 255
               G  +  +CF  L
Sbjct: 402 TSLVGYILLNDCFTRL 417



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>AK102677:Os11g0518900 |
          Length = 764

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -1

Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297
           IC +   ++++E  L++ L +K S++        L   VYR+ +VL++N   H   C PS
Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401

Query: 296 PH--GIEVRLNCFNGL 255
               G  +  +CF  L
Sbjct: 402 TSLVGYILLNDCFTRL 417



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>AK063772:Os11g0518900 |
          Length = 977

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -1

Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297
           IC +   ++++E  L++ L +K S++        L   VYR+ +VL++N   H   C PS
Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401

Query: 296 PH--GIEVRLNCFNGL 255
               G  +  +CF  L
Sbjct: 402 TSLVGYILLNDCFTRL 417



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>Os07g0119700:Os07g0119700 |
          Length = 92

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 5   TSAPRPLLCPSAPAPRLWLSLKPFIPVKFAHKLHENSVW 121
           +SAPRP   P +  P + LSL  FI V F +  +E   W
Sbjct: 35  SSAPRPGAAPRSGTPVVRLSLHEFIEVVFQNTENELQSW 73



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>AK120668:Os01g0848300 |
          Length = 660

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 390 PDATSLL--IQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDHRKEMTKTV 563
           PD  ++L  I+  +K  + L     +A   G+  +  GEVIR+T      +    +TK +
Sbjct: 571 PDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFI 630

Query: 564 AKLSEEGKVAIRNIRR 611
           +K +E  ++ +R++ R
Sbjct: 631 SKYAER-EIIVRDVNR 645


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,615,810
Number of extensions: 674001
Number of successful extensions: 1896
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1891
Number of HSP's successfully gapped: 9
Length of query: 384
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 282
Effective length of database: 11,315,673
Effective search space: 3191019786
Effective search space used: 3191019786
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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