| Clone Name | FLbaf53k03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065242:Os07g0570700 | 354 | 7e-98 | 2 | AK072486:Os04g0490400 | 113 | 3e-25 | 3 | AK121776:Os11g0518900 | 33 | 0.29 | 4 | AK102677:Os11g0518900 | 33 | 0.29 | 5 | AK063772:Os11g0518900 | 33 | 0.29 | 6 | Os07g0119700:Os07g0119700 | 30 | 4.2 | 7 | AK120668:Os01g0848300 | 28 | 9.4 |
|---|
>AK065242:Os07g0570700 | Length = 266 Score = 354 bits (908), Expect = 7e-98 Identities = 187/256 (73%), Positives = 207/256 (80%), Gaps = 1/256 (0%) Frame = +3 Query: 3 APPPRALSSA-RLPQRPGCGCLSNRSSLLSSPTNFMKIQSXXXXXXXXPLVLQHSDKRAV 179 A PPRALSSA R+PQRPGC + R ++LSS TNFM +++ PL+LQ+SDKRAV Sbjct: 13 AAPPRALSSAARVPQRPGC--VPERPNILSSSTNFMSLRAGPMRFYSRPLILQNSDKRAV 70 Query: 180 LRHXXXXXXXXXXXXXXXXXXXKMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPV 359 LRH +MEKAIETVQ+NFNTVRTGRANP+MLDRIEVEYYGTPV Sbjct: 71 LRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPV 130 Query: 360 NLKTIAQVNTPDATSLLIQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDH 539 NLK+IAQ+NTPDATSLLIQPYDKS LKLIEK IVAAN+GVTPSNDGEVIRVTVPPLTSD Sbjct: 131 NLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDR 190 Query: 540 RKEMTKTVAKLSEEGKVAIRNIRRDAIKAYDXXXXXXXXSEDNVKDLSADLQKITDEYMK 719 RKE+ KTVAKL+EEGKVAIRNIRRDAIKAYD SEDNVKDLSADLQK+TDEYMK Sbjct: 191 RKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMK 250 Query: 720 KVEAIQKQKEQELSKV 767 K+EAIQKQKEQEL K+ Sbjct: 251 KIEAIQKQKEQELMKI 266
>AK072486:Os04g0490400 | Length = 260 Score = 113 bits (282), Expect = 3e-25 Identities = 61/172 (35%), Positives = 102/172 (59%) Frame = +3 Query: 246 KMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPVNLKTIAQVNTPDATSLLIQPYD 425 +ME A+ + + +RTGRA+P MLD I VE G V L +A V+ DA +L + PYD Sbjct: 89 QMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYD 148 Query: 426 KSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDHRKEMTKTVAKLSEEGKVAIRNI 605 S +K IE AI+++ +G+ P+ DG I +PPLT ++ + + K V K +E+ K +IR Sbjct: 149 PSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRA 208 Query: 606 RRDAIKAYDXXXXXXXXSEDNVKDLSADLQKITDEYMKKVEAIQKQKEQELS 761 R+ A+ +D+VK L +++++T +++K + + K KE+E+S Sbjct: 209 RQKALDT--IKKSASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEIS 258
>AK121776:Os11g0518900 | Length = 977 Score = 33.5 bits (75), Expect = 0.29 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -1 Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297 IC + ++++E L++ L +K S++ L VYR+ +VL++N H C PS Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401 Query: 296 PH--GIEVRLNCFNGL 255 G + +CF L Sbjct: 402 TSLVGYILLNDCFTRL 417
>AK102677:Os11g0518900 | Length = 764 Score = 33.5 bits (75), Expect = 0.29 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -1 Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297 IC + ++++E L++ L +K S++ L VYR+ +VL++N H C PS Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401 Query: 296 PH--GIEVRLNCFNGL 255 G + +CF L Sbjct: 402 TSLVGYILLNDCFTRL 417
>AK063772:Os11g0518900 | Length = 977 Score = 33.5 bits (75), Expect = 0.29 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Frame = -1 Query: 470 ICSNYSFLNELEARLVIWLDKKRSRIWSIYLCNSLQ--VYRSSIVLNLNPVKHRRVCPPS 297 IC + ++++E L++ L +K S++ L VYR+ +VL++N H C PS Sbjct: 342 ICGSEETVSKMENYLLLDLTRKVSKLLGALASQELNQGVYRAGLVLDMNSASHDFKCTPS 401 Query: 296 PH--GIEVRLNCFNGL 255 G + +CF L Sbjct: 402 TSLVGYILLNDCFTRL 417
>Os07g0119700:Os07g0119700 | Length = 92 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 5 TSAPRPLLCPSAPAPRLWLSLKPFIPVKFAHKLHENSVW 121 +SAPRP P + P + LSL FI V F + +E W Sbjct: 35 SSAPRPGAAPRSGTPVVRLSLHEFIEVVFQNTENELQSW 73
>AK120668:Os01g0848300 | Length = 660 Score = 28.5 bits (62), Expect = 9.4 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +3 Query: 390 PDATSLL--IQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDHRKEMTKTV 563 PD ++L I+ +K + L +A G+ + GEVIR+T + +TK + Sbjct: 571 PDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFI 630 Query: 564 AKLSEEGKVAIRNIRR 611 +K +E ++ +R++ R Sbjct: 631 SKYAER-EIIVRDVNR 645 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,615,810 Number of extensions: 674001 Number of successful extensions: 1896 Number of sequences better than 10.0: 8 Number of HSP's gapped: 1891 Number of HSP's successfully gapped: 9 Length of query: 384 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 282 Effective length of database: 11,315,673 Effective search space: 3191019786 Effective search space used: 3191019786 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)