ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51e24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK104035:Os07g0506000 31 6.2
2AK103102:Os07g0506000 31 6.2
3AK068687:Os07g0506000 31 6.2

>AK104035:Os07g0506000 |
          Length = 301
 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 108 PTDLWRIRSIRCEGKEISCLRSSWTWWFVIEMPVTA 215
           P  L+  R++R E K +  L+  WTW FV+  P+ A
Sbjct: 132 PVSLFLPRNVRLEHKTLKLLKY-WTWQFVVVRPICA 166



to top

>AK103102:Os07g0506000 |
          Length = 301

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 108 PTDLWRIRSIRCEGKEISCLRSSWTWWFVIEMPVTA 215
           P  L+  R++R E K +  L+  WTW FV+  P+ A
Sbjct: 132 PVSLFLPRNVRLEHKTLKLLKY-WTWQFVVVRPICA 166



to top

>AK068687:Os07g0506000 |
          Length = 301

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 108 PTDLWRIRSIRCEGKEISCLRSSWTWWFVIEMPVTA 215
           P  L+  R++R E K +  L+  WTW FV+  P+ A
Sbjct: 132 PVSLFLPRNVRLEHKTLKLLKY-WTWQFVVVRPICA 166


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 87,865,315
Number of extensions: 1939061
Number of successful extensions: 4562
Number of sequences better than 10.0: 3
Number of HSP's gapped: 4562
Number of HSP's successfully gapped: 3
Length of query: 1070
Length of database: 15,399,855
Length adjustment: 111
Effective length of query: 959
Effective length of database: 10,955,304
Effective search space: 10506136536
Effective search space used: 10506136536
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top