ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062901:Os06g0124900 80 1e-15
2AK067853:Os03g0748700 28 5.2

>AK062901:Os06g0124900 |
          Length = 89
 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 40/58 (68%), Positives = 40/58 (68%)
 Frame = +3

Query: 81  MIYRNWSLLSSTVVIWGSXXXXXXXXXXXXXXKEKFQGYLSREGERLRQQDRAMMGKN 254
           MIYRNWSLLSSTVVIWG               KEKFQ YL REGERLRQQDRA MGKN
Sbjct: 32  MIYRNWSLLSSTVVIWGGVATAGLAGIFLFGGKEKFQNYLCREGERLRQQDRAAMGKN 89



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>AK067853:Os03g0748700 |
          Length = 476

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 330 YSTEIRRSMSSSHVETGRN*VVVCTSSCPSWLCPA 226
           + T   ++  SS  E G+N + + +S+CP W+C A
Sbjct: 159 FVTRYHQNQLSSGKEAGKN-LPMLSSACPGWICYA 192


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,573,984
Number of extensions: 250385
Number of successful extensions: 540
Number of sequences better than 10.0: 2
Number of HSP's gapped: 540
Number of HSP's successfully gapped: 2
Length of query: 183
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 89
Effective length of database: 11,636,001
Effective search space: 1035604089
Effective search space used: 1035604089
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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