ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os06g03486:12006.t04912:unspliced-genomic expressed protein 57 5e-14
2LOC_Os06g03514:12006.t04929:unspliced-genomic expressed protein 54 3e-12
3LOC_Os07g25150:12007.t02211:unspliced-genomic myb-related pr... 37 0.12
4LOC_Os11g16720:12011.t01452:unspliced-genomic hypothetical p... 34 0.80
5LOC_Os05g48260:12005.t04260:unspliced-genomic expressed protein 33 2.1
6LOC_Os03g37120:12003.t03173:unspliced-genomic ATP binding pr... 32 3.9
7LOC_Os09g36530:12009.t03129:unspliced-genomic nuclease, puta... 32 3.9
8LOC_Os03g01150:12003.t00015:unspliced-genomic palmitoyl-prot... 32 3.9
9LOC_Os02g09750:12002.t00822:unspliced-genomic lycopene beta ... 32 3.9
10LOC_Os01g24420:12001.t02163:unspliced-genomic expressed protein 32 3.9
11LOC_Os07g38310:12007.t03497:unspliced-genomic hypothetical p... 31 5.3
12LOC_Os02g18430:12002.t01636:unspliced-genomic protein kinase... 31 5.3
13LOC_Os11g01050:12011.t00005:unspliced-genomic protein bindin... 31 7.3
14LOC_Os06g05590:12006.t00445:unspliced-genomic F-box domain c... 31 7.3
15LOC_Os03g08620:12003.t00719:unspliced-genomic DNA binding pr... 31 7.4
16LOC_Os03g08610:12003.t00718:unspliced-genomic protein bindin... 31 7.4
17LOC_Os01g60140:12001.t05398:unspliced-genomic ATCHX15, putat... 31 7.4

>LOC_Os06g03486:12006.t04912:unspliced-genomic expressed protein|
          Length = 3092
 Score = 55.6 bits (115), Expect(2) = 5e-14
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +3 / +2

                                         
Query: 177  KEKFQGYLSREGERLRQQDRAMMGKN*CR 263
            +EKFQ YL REGERLRQQDRA MGKN* +
Sbjct: 2654 QEKFQNYLCREGERLRQQDRAAMGKN*LK 2740



 Score = 45.1 bits (92), Expect(2) = 5e-14
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3 / +3

                            
Query: 81  MIYRNWSLLSSTVVIWG 131
           MIYRNWSLLSSTVVIWG
Sbjct: 249 MIYRNWSLLSSTVVIWG 299



 Score = 56.5 bits (117), Expect(2) = 2e-08
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -3 / -3

                                              
Query: 280  SELSCGLH*FLPIMALSCCLSLSPSRER*PWNFS 179
            S LS    *FLPI ALSCCLSLSPSR+R* WNFS
Sbjct: 2757 SALS*VFS*FLPIAALSCCLSLSPSRQR*FWNFS 2656



 Score = 24.9 bits (48), Expect(2) = 2e-08
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3 / -2

                      
Query: 127 QMTTVEESRDQ 95
           QMTTVEES DQ
Sbjct: 295 QMTTVEESSDQ 263



 Score = 42.3 bits (86), Expect = 0.003
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = -1 / -1

                                     
Query: 255  SSCPSWLCPAASASRLRGKDSPGIS 181
            SSCP  LCP A AS L GKDS GIS
Sbjct: 2732 SSCPLLLCPVA*ASHLHGKDSSGIS 2658



 Score = 35.9 bits (72), Expect = 0.22
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = +2 / +1

                                       
Query: 182  EIPGLSFPRRREAEAAGQSHDGQELVQ 262
            EIP LS P R EA A GQS +GQEL +
Sbjct: 2659 EIPELSLP*R*EA*ATGQSSNGQELAE 2739



 Score = 34.1 bits (68), Expect = 0.79
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -2 / -2

                                 
Query: 257  LVLAHHGSVLLPQPLAFAGKI 195
            LVLAH  SVLLP+PL F  KI
Sbjct: 2734 LVLAHCCSVLLPKPLTFTAKI 2672



 Score = 33.6 bits (67), Expect = 1.1
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1 / +3

                                 
Query: 196  IFPAKARG*GSRTEP*WARTS 258
            IF  K RG G+RTE  WARTS
Sbjct: 2673 IFAVKVRGLGNRTEQQWARTS 2735



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>LOC_Os06g03514:12006.t04929:unspliced-genomic expressed protein|
          Length = 2929

 Score = 53.8 bits (111), Expect(2) = 3e-12
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = +3 / +1

                                               
Query: 177  KEKFQGYLSREGERLRQQDRAMMGKN*CRPQLNSD 281
            +EKFQ YLS EG+RLRQQDRA MGKN* +   N D
Sbjct: 2509 QEKFQKYLSGEGQRLRQQDRAAMGKN*RKTSGNFD 2613



 Score = 40.5 bits (82), Expect(2) = 3e-12
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3 / +3

                            
Query: 81  MIYRNWSLLSSTVVIWG 131
           MIYR WSLLSST++IWG
Sbjct: 78  MIYRKWSLLSSTILIWG 128



 Score = 48.3 bits (99), Expect = 4e-05
 Identities = 23/34 (67%), Positives = 24/34 (70%)
 Frame = -3 / -3

                                              
Query: 280  SELSCGLH*FLPIMALSCCLSLSPSRER*PWNFS 179
            S+L     *FLPI ALSCCLSL PS ER  WNFS
Sbjct: 2612 SKLPEVFR*FLPIAALSCCLSLWPSPERYFWNFS 2511



 Score = 46.4 bits (95), Expect = 2e-04
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +2 / +3

                                                  
Query: 182  EIPGLSFPRRREAEAAGQSHDGQELVQTTTQFRPVSTC 295
            E+P +SF  R EA+AAGQS DGQEL +   QFR  + C
Sbjct: 2514 EVPEVSFR*RPEAQAAGQSGDGQELAKDLRQFRWRNRC 2627



 Score = 41.4 bits (84), Expect = 0.005
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2 / -2

                                  
Query: 260  ALVLAHHGSVLLPQPLAFAGKI 195
            +LVLAH  SVLLP+PLAF GKI
Sbjct: 2592 SLVLAHRRSVLLPEPLAFTGKI 2527



 Score = 40.0 bits (81), Expect = 0.013
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = -1 / -1

                                                         
Query: 315  RRSMSSSHVETGRN*VVVCTSSCPSWLCPAASASRLRGKDSPGIS 181
            R  +   H+   RN +    SSCPS LCPAA AS L  KD+ G S
Sbjct: 2647 RGKICQIHLLRHRNCLRSFASSCPSPLCPAA*ASGLHRKDTSGTS 2513



 Score = 40.0 bits (81), Expect = 0.013
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1 / +2

                                 
Query: 196  IFPAKARG*GSRTEP*WARTS 258
            IFP KARG GSRTE  WARTS
Sbjct: 2528 IFPVKARGSGSRTERRWARTS 2590



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>LOC_Os07g25150:12007.t02211:unspliced-genomic myb-related protein Myb4, putative|
          Length = 2810

 Score = 36.8 bits (74), Expect = 0.12
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -2 / -1

                                                     
Query: 347 QRKRCSIAQRYVDPCLVHMSRRVGIELWSALVLAHHGSVLLP 222
           QR+RC   QR +DPCL   S  V    WS +     G V  P
Sbjct: 197 QRRRCGAGQRRLDPCLAMGSSAVVPRRWSDIEAERGGEVAGP 72



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>LOC_Os11g16720:12011.t01452:unspliced-genomic hypothetical protein|
          Length = 788

 Score = 34.1 bits (68), Expect = 0.80
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -1 / -1

                                     
Query: 267 VVCTSSCPSWLCPAASASRLRGKDSP 190
           VVCTSS P+   PAA A+  RG D P
Sbjct: 302 VVCTSSSPTGRTPAAHAASPRGGDRP 225



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>LOC_Os05g48260:12005.t04260:unspliced-genomic expressed protein|
          Length = 4273

 Score = 32.7 bits (65), Expect = 2.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1 / +3

                                               
Query: 333  FYSTEIRRSMSSSHVETGRN*VVVCTSSCPSWLCP 229
            F    +RR+   SH  +GR *    TSS PSW  P
Sbjct: 2013 FCRCRMRRASGRSHGGSGRQ*TWTTTSSSPSWTPP 2117



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>LOC_Os03g37120:12003.t03173:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 3314

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2 / +2

                                       
Query: 380  GGQKQKVATARQRKRCSIAQRYVDPCL 300
            G QK+K  T R  + C I QR+ D CL
Sbjct: 2003 GDQKKKKKTGRGFRSCQIHQRFGDSCL 2083



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>LOC_Os09g36530:12009.t03129:unspliced-genomic nuclease, putative, expressed|
          Length = 4728

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1 / -3

                                                   
Query: 256  SADHNSIPTRLDM*TRHGSTYLCAIEHLFLCLAVATFCF 372
            S   N  PT++ M   + ++++  +E LF C    TF F
Sbjct: 1276 SRGQNKRPTKMSMICNYTTSFIVHLEQLFFCYFTKTFLF 1160



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>LOC_Os03g01150:12003.t00015:unspliced-genomic palmitoyl-protein thioesterase 1 precursor, putative, expressed|
          Length = 4032

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1 / -3

                                    
Query: 261  CTSSCPSWLCPAASASRLRGKDSP 190
            CTSSC SW  P A  +R R   SP
Sbjct: 3697 CTSSCQSWKYPGAPLARTRISLSP 3626



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>LOC_Os02g09750:12002.t00822:unspliced-genomic lycopene beta cyclase, chloroplast precursor, putative, expressed|
          Length = 1820

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1 / +2

                                      
Query: 298  TRHGSTYLCAIEHLFLCLAVATFCFC 375
            T  G   +C I HL +C+ +  FC C
Sbjct: 1457 TEIGEVRICIISHLKICIWITEFCCC 1534



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>LOC_Os01g24420:12001.t02163:unspliced-genomic expressed protein|
          Length = 6956

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1 / +3

                               
Query: 246  PSWLCPAASASRLRGKDSP 190
            PSWLCP+   S   G DSP
Sbjct: 5802 PSWLCPSPRGSATTGGDSP 5858



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>LOC_Os07g38310:12007.t03497:unspliced-genomic hypothetical protein|
          Length = 765

 Score = 31.3 bits (62), Expect = 5.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2 / -3

                                                 
Query: 188 PGLSFPRRREAEAAGQSHDGQELVQTTTQFRPVSTCEL 301
           P  + P  R A AAGQ    +  + T T FRP+   E+
Sbjct: 487 PRTTAPEPRSATAAGQCRHEEGRIVTATAFRPLPLLEI 374



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>LOC_Os02g18430:12002.t01636:unspliced-genomic protein kinase G11A, putative|
          Length = 1575

 Score = 31.3 bits (62), Expect = 5.3
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +2 / +3

                                      
Query: 203 PRRREAEAAGQSHDGQELVQTTTQFRP 283
           PRRRE  A     DGQEL     Q RP
Sbjct: 351 PRRRERRAVRHEGDGQELAGEPQQARP 431



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>LOC_Os11g01050:12011.t00005:unspliced-genomic protein binding protein, putative, expressed|
          Length = 1496

 Score = 30.9 bits (61), Expect = 7.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2 / -3

                                         
Query: 368  ASAPHE*SRRTCSFEMNFMILSYPLKACC 454
            A+APH    R    EM F  LS+P  ACC
Sbjct: 1200 AAAPHLGLHRRRPREMEFWPLSWPRSACC 1114



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>LOC_Os06g05590:12006.t00445:unspliced-genomic F-box domain containing protein, expressed|
          Length = 2184

 Score = 30.9 bits (61), Expect = 7.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3 / -1

                                  
Query: 456 CQLCSGALNELYCTYHRC*VEAH 524
           C LCSG +N +    +RC V+AH
Sbjct: 471 CVLCSGVVNGMLRPVYRCIVDAH 403



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>LOC_Os03g08620:12003.t00719:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 2352

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1 / +1

                                             
Query: 301  RHGSTYLCAIEHLFLCLAVATFCFCPP*IISTH 399
            RH   Y        L + +AT CFCP *++  H
Sbjct: 1963 RHSGVY*LTDLEYLLFMCLATACFCPN*VLMEH 2061



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>LOC_Os03g08610:12003.t00718:unspliced-genomic protein binding protein, putative, expressed|
          Length = 3385

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1 / -3

                                             
Query: 301  RHGSTYLCAIEHLFLCLAVATFCFCPP*IISTH 399
            RH   Y        L + +AT CFCP *++  H
Sbjct: 3353 RHSGVY*LTDLEYLLFMCLATACFCPN*VLMEH 3255



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>LOC_Os01g60140:12001.t05398:unspliced-genomic ATCHX15, putative, expressed|
          Length = 3220

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1 / +3

                           
Query: 261 CTSSCPSWLCPAASAS 214
           C+S  P+W CP+ASAS
Sbjct: 690 CSSPWPAWRCPSASAS 737


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 183,967,977
Number of extensions: 2795558
Number of successful extensions: 10412
Number of sequences better than 10.0: 17
Length of query: 183
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 135
Effective length of database: 52,912,542
Effective search space: 7143193170
Effective search space used: 7143193170
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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