| Clone Name | FLbaf51e08 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g03486:12006.t04912:unspliced-genomic expressed protein| Length = 3092 Score = 55.6 bits (115), Expect(2) = 5e-14 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = +3 / +2 Query: 177 KEKFQGYLSREGERLRQQDRAMMGKN*CR 263 +EKFQ YL REGERLRQQDRA MGKN* + Sbjct: 2654 QEKFQNYLCREGERLRQQDRAAMGKN*LK 2740 Score = 45.1 bits (92), Expect(2) = 5e-14 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = +3 / +3 Query: 81 MIYRNWSLLSSTVVIWG 131 MIYRNWSLLSSTVVIWG Sbjct: 249 MIYRNWSLLSSTVVIWG 299 Score = 56.5 bits (117), Expect(2) = 2e-08 Identities = 26/34 (76%), Positives = 27/34 (79%) Frame = -3 / -3 Query: 280 SELSCGLH*FLPIMALSCCLSLSPSRER*PWNFS 179 S LS *FLPI ALSCCLSLSPSR+R* WNFS Sbjct: 2757 SALS*VFS*FLPIAALSCCLSLSPSRQR*FWNFS 2656 Score = 24.9 bits (48), Expect(2) = 2e-08 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = -3 / -2 Query: 127 QMTTVEESRDQ 95 QMTTVEES DQ Sbjct: 295 QMTTVEESSDQ 263 Score = 42.3 bits (86), Expect = 0.003 Identities = 18/25 (72%), Positives = 18/25 (72%) Frame = -1 / -1 Query: 255 SSCPSWLCPAASASRLRGKDSPGIS 181 SSCP LCP A AS L GKDS GIS Sbjct: 2732 SSCPLLLCPVA*ASHLHGKDSSGIS 2658 Score = 35.9 bits (72), Expect = 0.22 Identities = 17/27 (62%), Positives = 19/27 (70%) Frame = +2 / +1 Query: 182 EIPGLSFPRRREAEAAGQSHDGQELVQ 262 EIP LS P R EA A GQS +GQEL + Sbjct: 2659 EIPELSLP*R*EA*ATGQSSNGQELAE 2739 Score = 34.1 bits (68), Expect = 0.79 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = -2 / -2 Query: 257 LVLAHHGSVLLPQPLAFAGKI 195 LVLAH SVLLP+PL F KI Sbjct: 2734 LVLAHCCSVLLPKPLTFTAKI 2672 Score = 33.6 bits (67), Expect = 1.1 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1 / +3 Query: 196 IFPAKARG*GSRTEP*WARTS 258 IF K RG G+RTE WARTS Sbjct: 2673 IFAVKVRGLGNRTEQQWARTS 2735
>LOC_Os06g03514:12006.t04929:unspliced-genomic expressed protein| Length = 2929 Score = 53.8 bits (111), Expect(2) = 3e-12 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = +3 / +1 Query: 177 KEKFQGYLSREGERLRQQDRAMMGKN*CRPQLNSD 281 +EKFQ YLS EG+RLRQQDRA MGKN* + N D Sbjct: 2509 QEKFQKYLSGEGQRLRQQDRAAMGKN*RKTSGNFD 2613 Score = 40.5 bits (82), Expect(2) = 3e-12 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +3 / +3 Query: 81 MIYRNWSLLSSTVVIWG 131 MIYR WSLLSST++IWG Sbjct: 78 MIYRKWSLLSSTILIWG 128 Score = 48.3 bits (99), Expect = 4e-05 Identities = 23/34 (67%), Positives = 24/34 (70%) Frame = -3 / -3 Query: 280 SELSCGLH*FLPIMALSCCLSLSPSRER*PWNFS 179 S+L *FLPI ALSCCLSL PS ER WNFS Sbjct: 2612 SKLPEVFR*FLPIAALSCCLSLWPSPERYFWNFS 2511 Score = 46.4 bits (95), Expect = 2e-04 Identities = 21/38 (55%), Positives = 26/38 (68%) Frame = +2 / +3 Query: 182 EIPGLSFPRRREAEAAGQSHDGQELVQTTTQFRPVSTC 295 E+P +SF R EA+AAGQS DGQEL + QFR + C Sbjct: 2514 EVPEVSFR*RPEAQAAGQSGDGQELAKDLRQFRWRNRC 2627 Score = 41.4 bits (84), Expect = 0.005 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = -2 / -2 Query: 260 ALVLAHHGSVLLPQPLAFAGKI 195 +LVLAH SVLLP+PLAF GKI Sbjct: 2592 SLVLAHRRSVLLPEPLAFTGKI 2527 Score = 40.0 bits (81), Expect = 0.013 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = -1 / -1 Query: 315 RRSMSSSHVETGRN*VVVCTSSCPSWLCPAASASRLRGKDSPGIS 181 R + H+ RN + SSCPS LCPAA AS L KD+ G S Sbjct: 2647 RGKICQIHLLRHRNCLRSFASSCPSPLCPAA*ASGLHRKDTSGTS 2513 Score = 40.0 bits (81), Expect = 0.013 Identities = 17/21 (80%), Positives = 17/21 (80%) Frame = +1 / +2 Query: 196 IFPAKARG*GSRTEP*WARTS 258 IFP KARG GSRTE WARTS Sbjct: 2528 IFPVKARGSGSRTERRWARTS 2590
>LOC_Os07g25150:12007.t02211:unspliced-genomic myb-related protein Myb4, putative| Length = 2810 Score = 36.8 bits (74), Expect = 0.12 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -2 / -1 Query: 347 QRKRCSIAQRYVDPCLVHMSRRVGIELWSALVLAHHGSVLLP 222 QR+RC QR +DPCL S V WS + G V P Sbjct: 197 QRRRCGAGQRRLDPCLAMGSSAVVPRRWSDIEAERGGEVAGP 72
>LOC_Os11g16720:12011.t01452:unspliced-genomic hypothetical protein| Length = 788 Score = 34.1 bits (68), Expect = 0.80 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -1 / -1 Query: 267 VVCTSSCPSWLCPAASASRLRGKDSP 190 VVCTSS P+ PAA A+ RG D P Sbjct: 302 VVCTSSSPTGRTPAAHAASPRGGDRP 225
>LOC_Os05g48260:12005.t04260:unspliced-genomic expressed protein| Length = 4273 Score = 32.7 bits (65), Expect = 2.1 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 / +3 Query: 333 FYSTEIRRSMSSSHVETGRN*VVVCTSSCPSWLCP 229 F +RR+ SH +GR * TSS PSW P Sbjct: 2013 FCRCRMRRASGRSHGGSGRQ*TWTTTSSSPSWTPP 2117
>LOC_Os03g37120:12003.t03173:unspliced-genomic ATP binding protein, putative, expressed| Length = 3314 Score = 31.8 bits (63), Expect = 3.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 / +2 Query: 380 GGQKQKVATARQRKRCSIAQRYVDPCL 300 G QK+K T R + C I QR+ D CL Sbjct: 2003 GDQKKKKKTGRGFRSCQIHQRFGDSCL 2083
>LOC_Os09g36530:12009.t03129:unspliced-genomic nuclease, putative, expressed| Length = 4728 Score = 31.8 bits (63), Expect = 3.9 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 / -3 Query: 256 SADHNSIPTRLDM*TRHGSTYLCAIEHLFLCLAVATFCF 372 S N PT++ M + ++++ +E LF C TF F Sbjct: 1276 SRGQNKRPTKMSMICNYTTSFIVHLEQLFFCYFTKTFLF 1160
>LOC_Os03g01150:12003.t00015:unspliced-genomic palmitoyl-protein thioesterase 1 precursor, putative, expressed| Length = 4032 Score = 31.8 bits (63), Expect = 3.9 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 / -3 Query: 261 CTSSCPSWLCPAASASRLRGKDSP 190 CTSSC SW P A +R R SP Sbjct: 3697 CTSSCQSWKYPGAPLARTRISLSP 3626
>LOC_Os02g09750:12002.t00822:unspliced-genomic lycopene beta cyclase, chloroplast precursor, putative, expressed| Length = 1820 Score = 31.8 bits (63), Expect = 3.9 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +1 / +2 Query: 298 TRHGSTYLCAIEHLFLCLAVATFCFC 375 T G +C I HL +C+ + FC C Sbjct: 1457 TEIGEVRICIISHLKICIWITEFCCC 1534
>LOC_Os01g24420:12001.t02163:unspliced-genomic expressed protein| Length = 6956 Score = 31.8 bits (63), Expect = 3.9 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -1 / +3 Query: 246 PSWLCPAASASRLRGKDSP 190 PSWLCP+ S G DSP Sbjct: 5802 PSWLCPSPRGSATTGGDSP 5858
>LOC_Os07g38310:12007.t03497:unspliced-genomic hypothetical protein| Length = 765 Score = 31.3 bits (62), Expect = 5.3 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 / -3 Query: 188 PGLSFPRRREAEAAGQSHDGQELVQTTTQFRPVSTCEL 301 P + P R A AAGQ + + T T FRP+ E+ Sbjct: 487 PRTTAPEPRSATAAGQCRHEEGRIVTATAFRPLPLLEI 374
>LOC_Os02g18430:12002.t01636:unspliced-genomic protein kinase G11A, putative| Length = 1575 Score = 31.3 bits (62), Expect = 5.3 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = +2 / +3 Query: 203 PRRREAEAAGQSHDGQELVQTTTQFRP 283 PRRRE A DGQEL Q RP Sbjct: 351 PRRRERRAVRHEGDGQELAGEPQQARP 431
>LOC_Os11g01050:12011.t00005:unspliced-genomic protein binding protein, putative, expressed| Length = 1496 Score = 30.9 bits (61), Expect = 7.3 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 / -3 Query: 368 ASAPHE*SRRTCSFEMNFMILSYPLKACC 454 A+APH R EM F LS+P ACC Sbjct: 1200 AAAPHLGLHRRRPREMEFWPLSWPRSACC 1114
>LOC_Os06g05590:12006.t00445:unspliced-genomic F-box domain containing protein, expressed| Length = 2184 Score = 30.9 bits (61), Expect = 7.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 / -1 Query: 456 CQLCSGALNELYCTYHRC*VEAH 524 C LCSG +N + +RC V+AH Sbjct: 471 CVLCSGVVNGMLRPVYRCIVDAH 403
>LOC_Os03g08620:12003.t00719:unspliced-genomic DNA binding protein, putative, expressed| Length = 2352 Score = 30.9 bits (61), Expect = 7.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +1 / +1 Query: 301 RHGSTYLCAIEHLFLCLAVATFCFCPP*IISTH 399 RH Y L + +AT CFCP *++ H Sbjct: 1963 RHSGVY*LTDLEYLLFMCLATACFCPN*VLMEH 2061
>LOC_Os03g08610:12003.t00718:unspliced-genomic protein binding protein, putative, expressed| Length = 3385 Score = 30.9 bits (61), Expect = 7.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +1 / -3 Query: 301 RHGSTYLCAIEHLFLCLAVATFCFCPP*IISTH 399 RH Y L + +AT CFCP *++ H Sbjct: 3353 RHSGVY*LTDLEYLLFMCLATACFCPN*VLMEH 3255
>LOC_Os01g60140:12001.t05398:unspliced-genomic ATCHX15, putative, expressed| Length = 3220 Score = 30.9 bits (61), Expect = 7.4 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -1 / +3 Query: 261 CTSSCPSWLCPAASAS 214 C+S P+W CP+ASAS Sbjct: 690 CSSPWPAWRCPSASAS 737 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 183,967,977 Number of extensions: 2795558 Number of successful extensions: 10412 Number of sequences better than 10.0: 17 Length of query: 183 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 135 Effective length of database: 52,912,542 Effective search space: 7143193170 Effective search space used: 7143193170 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)