ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8NBJ4:GP73_HUMAN Golgi phosphoprotein 2 - Homo sapiens (Human) 31 3.3
2Q8REH1:NADD_FUSNN Probable nicotinate-nucleotide adenylyltransfe... 30 4.3
3Q8F9N0:NUOI_LEPIN NADH-quinone oxidoreductase subunit I - Leptos... 30 7.3
4Q72VZ9:NUOI_LEPIC NADH-quinone oxidoreductase subunit I - Leptos... 30 7.3

>Q8NBJ4:GP73_HUMAN Golgi phosphoprotein 2 - Homo sapiens (Human)|
          Length = 401
 Score = 30.8 bits (68), Expect = 3.3
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 534 DDKNVLQLNSDGTYNIIHSEHRNKVDKQQAFKG*DRIMKFISKEHVRRD 388
           + +N  +L  +  YN+  +E  ++ DKQ A  G DR +   + E  +RD
Sbjct: 338 EGRNQQKLRGEDDYNMDENEAESETDKQAALAGNDRNIDVFNVEDQKRD 386



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>Q8REH1:NADD_FUSNN Probable nicotinate-nucleotide adenylyltransferase - Fusobacterium|
           nucleatum subsp. nucleatum
          Length = 193

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -1

Query: 540 FFDDKNVLQLNSDGTYNIIHSEHRNKVDKQQAFKG--*DRIMKFISKEHV 397
           F ++KN++ L ++  YNI  +E RNKV  ++   G    ++ K I KE++
Sbjct: 144 FLNNKNIIILENE-YYNISSTEIRNKVKNKEDISGLVNKKVKKLIEKEYI 192



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>Q8F9N0:NUOI_LEPIN NADH-quinone oxidoreductase subunit I - Leptospira interrogans|
          Length = 175

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 345 EKKMFYSTEIRRSMSSSHVETGRN*VVVCTSS-CPSWLCPA 226
           EKK  YST  R   +    E GR     CTS  C  W+CPA
Sbjct: 53  EKKRKYSTRFRGMHTMKRDEQGRE---RCTSCFCCMWICPA 90



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>Q72VZ9:NUOI_LEPIC NADH-quinone oxidoreductase subunit I - Leptospira interrogans|
           serogroup Icterohaemorrhagiae serovar copenhageni
          Length = 175

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 345 EKKMFYSTEIRRSMSSSHVETGRN*VVVCTSS-CPSWLCPA 226
           EKK  YST  R   +    E GR     CTS  C  W+CPA
Sbjct: 53  EKKRKYSTRFRGMHTMKRDEQGRE---RCTSCFCCMWICPA 90


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 75,785,168
Number of extensions: 1444142
Number of successful extensions: 3682
Number of sequences better than 10.0: 4
Number of HSP's gapped: 3682
Number of HSP's successfully gapped: 4
Length of query: 183
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 77
Effective length of database: 71,611,169
Effective search space: 5514060013
Effective search space used: 5514060013
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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