ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53i23 |
|---|---|
| Clone Library Name | barley_pub |
>O13335:NDE1_NEUCR Nuclear distribution protein nudE homolog 1 - Neurospora crassa| Length = 697 Score = 36.2 bits (82), Expect = 0.40 Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 3/135 (2%) Frame = -3 Query: 561 GSQEQSKHLQEDRK--EQATELNQAGPLEQQKMKPKQD-GSMRLGTPAMAXXXXXX*TGQ 391 G QE+ + E ++ E+ ++L + Q K++ Q G + T +A + Sbjct: 157 GEQERERLRVEAQRLREELSDLKIEAEILQSKLRKHQARGHLTQITTTIAPAPASPLSTA 216 Query: 390 ASSLCSLPLPPHATKPIQAIPFLQSSPSP*IKETRLN*TMCGAQSTPVKRQPPAPMR*PK 211 +S L S P + I + +Q PSP + + L + ++STPVK+ P Sbjct: 217 SSPLVSTPPDTKSLSTIDTLSEVQDPPSPPMSDASLGKGLRASRSTPVKQTASRP----- 271 Query: 210 KLAGECKNPANQVQE 166 G C+ P + + Sbjct: 272 ---GGCRTPKTSISK 283
>P46889:FTSK_ECOLI DNA translocase ftsK - Escherichia coli| Length = 1329 Score = 33.1 bits (74), Expect = 3.4 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = -2 Query: 1174 EPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPHAPRLHPPVGPEEADERLEP 1004 +P P P P Q V P ++ PQQPV+ + PV P+ D L P Sbjct: 767 QPQQPVAPQPQYQQPQQPVA-PQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHP 822
>Q6NYU6:MIDN_DANRE Midnolin - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 509 Score = 32.3 bits (72), Expect = 5.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 1114 HPDHAHRHPQQPVSKVPHAPRLHPP 1040 HP H H+HP P + +P P PP Sbjct: 199 HPHHPHQHPHHPNTTLPSNPAAFPP 223
>Q83S00:FTSK_SHIFL DNA translocase ftsK - Shigella flexneri| Length = 1342 Score = 32.3 bits (72), Expect = 5.7 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = -2 Query: 1174 EPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPHAPRLHPPVGPEEADERLEP 1004 +P P P Q V P ++ PQQPV+ P + PV P+ D L P Sbjct: 780 QPQQPVAPQQQYQQPQQPVA-PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHP 835
>Q8FJC7:FTSK_ECOL6 DNA translocase ftsK - Escherichia coli O6| Length = 1347 Score = 32.3 bits (72), Expect = 5.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Frame = -2 Query: 1174 EPDAPAGPLPVRVQADVDVGH----PDHAHRHPQQPVSKVPHAPRLHPPVGPEEADERLE 1007 +P P P P Q P ++ PQQPV++ P + PV P+ D L Sbjct: 780 QPQQPVAPQPQYQQPQYQQPQQPVAPQQQYQQPQQPVTQQPQYQQPQQPVVPQPQDTLLH 839 Query: 1006 P 1004 P Sbjct: 840 P 840
>Q8X5H9:FTSK_ECO57 DNA translocase ftsK - Escherichia coli O157:H7| Length = 1342 Score = 32.3 bits (72), Expect = 5.7 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = -2 Query: 1174 EPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPHAPRLHPPVGPEEADERLEP 1004 +P P P Q V P ++ PQQPV+ P + PV P+ D L P Sbjct: 780 QPQQPVAPQQQYQQPQQPVA-PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHP 835
>Q1H9T6:ZBT48_MOUSE Zinc finger and BTB domain-containing protein 48 - Mus musculus| (Mouse) Length = 681 Score = 32.0 bits (71), Expect = 7.5 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = -3 Query: 612 FLPSSSIDACLSNLPSAGSQEQSKHLQEDRKEQATELNQAGPLEQQKMKPKQDGSMRLGT 433 F P +S+ S L SQ+ HL+E E+ + L +P+ +LGT Sbjct: 114 FQPQTSVGQAQSGLGQPASQDVKSHLKEPTDLDEEEVFRTLSLASVDQEPRDTEQPQLGT 173 Query: 432 PAMA 421 PA + Sbjct: 174 PAQS 177
>P10165:PRPG2_RAT Proline-rich proteoglycan 2 precursor - Rattus norvegicus (Rat)| Length = 295 Score = 32.0 bits (71), Expect = 7.5 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -2 Query: 1195 GGEERRPEPDAPAGPLPV--RVQADVDVGHPDHAHRHPQQPVS----KVPHAPRLHPPVG 1034 GG +R P+P +P GP P Q P + P QP S P P+ PP G Sbjct: 200 GGPQRPPQPGSPQGPPPPGGPQQRPPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQG 259 Query: 1033 P 1031 P Sbjct: 260 P 260 Score = 31.6 bits (70), Expect = 9.7 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -2 Query: 1195 GGEERRPEPDAPAGPLPVR--VQADVDVGHPDHAHRHPQQPVSKV----PHAPRLHPPVG 1034 GG +R P+P +P GP P Q P + P QP S P P+ PP G Sbjct: 168 GGPQRPPQPGSPQGPPPPGGPQQRAPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQG 227 Query: 1033 P 1031 P Sbjct: 228 P 228
>P05142:PRP2_MOUSE Proline-rich protein MP-2 precursor - Mus musculus (Mouse)| Length = 261 Score = 32.0 bits (71), Expect = 7.5 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -2 Query: 1195 GGEERRPEPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPHAPRLHPPVGP 1031 G + R P+ P GP P Q G P R PQ P P P+ PP GP Sbjct: 169 GPQPRPPQGPPPTGPQPRPTQGPPPTGGPQ--QRPPQGP--PPPGGPQPRPPQGP 219
>Q6GLQ4:PP1RA_XENLA Serine/threonine-protein phosphatase 1 regulatory subunit 10 -| Xenopus laevis (African clawed frog) Length = 819 Score = 31.6 bits (70), Expect = 9.7 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -2 Query: 1198 LGGEERRPEPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPHAPRLHPPVGP 1031 LG + + + P GP Q V++G P + ++ Q P P +PP GP Sbjct: 607 LGSLQNQNQNQGPPGPAGQGSQGPVNIGFPPPSQKNHQPPPPHHQPPPPHYPPPGP 662
>O35071:KIF1C_MOUSE Kinesin-like protein KIF1C - Mus musculus (Mouse)| Length = 1100 Score = 31.6 bits (70), Expect = 9.7 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Frame = -2 Query: 1198 LGGEERRPEPDAPAGPLPVRVQADVDVGHPDHAHRHPQQPVSKVPH--------APRLHP 1043 LGG + E +P G LP P + P P S PH +P P Sbjct: 387 LGG--LKVEEGSPGGVLP-----------PASSPPAPASPSSPPPHNGELEPSFSPSAEP 433 Query: 1042 PVGPEEADERLEPDE 998 +GPEEA ERL+ E Sbjct: 434 QIGPEEAMERLQETE 448 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 241,174,969 Number of extensions: 5176736 Number of successful extensions: 17318 Number of sequences better than 10.0: 11 Number of HSP's gapped: 17121 Number of HSP's successfully gapped: 12 Length of query: 528 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 410 Effective length of database: 68,319,629 Effective search space: 28011047890 Effective search space used: 28011047890 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
