ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53i23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062871.1| Oryza sativa (japonica cultivar-group) Os05g0565100 (Os05g0565100) mRNA, complete cds Length = 1378 Score = 139 bits (70), Expect = 3e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 1100 tgcgtggtcggggtggccaacgtctacatcggcctgcacacgtaccgggagaggaccggc 1159 |||||||| || || |||||||||||||||||| ||||||| |||| ||||||||||| Sbjct: 958 tgcgtggtgggcgtcgccaacgtctacatcggcatgcacacctaccatgagaggaccggg 1017 Query: 1160 aggagcgtcgggctctggacggcgctcctcaccgccgaggtctccgccgtggcgctcgtc 1219 |||||||| ||| ||||||| ||||||||||| ||||| || ||| ||||| ||||| Sbjct: 1018 aggagcgtgaggccgtggacggtgctcctcaccgtggaggtgtcggccatggcgttcgtc 1077 Query: 1220 tacctcctccaggacaggtggaaccacatcgtccggca 1257 |||||| |||||||||||||||||||| |||| ||||| Sbjct: 1078 tacctcttccaggacaggtggaaccacgtcgtgcggca 1115 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 707 tacaagatggtccagccattggagctgacgcccaagctgtcgctgcagctcaagctccac 766 |||||||| |||||||| |||||||| || ||||| || || || || ||||||||||| Sbjct: 565 tacaagattgtccagcctttggagctcacacccaaactctcccttcaactcaagctccat 624 Query: 767 gccttcctcctctggtcgtcggtcggcttcctgatgccgatcggcgtgctgctgatcag 825 |||||||| |||||||| ||||| || ||| ||||||| || || || ||||| ||||| Sbjct: 625 gccttcctgctctggtcttcggttggtttcttgatgccaataggagtactgctaatcag 683 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 928 gctgtcgatcaccaacttcgagaacgccttcaacaacacccaccag 973 ||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 786 gctgtcgataagcaacttcgagaacgccttcaacaacacacaccag 831 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 586 agcatcaatgctactgcttggaagaaaaagact 618 |||||||||||||||| |||||||||||||||| Sbjct: 441 agcatcaatgctactgtttggaagaaaaagact 473 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1318 gtacccggccaacgaccacaaggaggtggccgtgatgccgtag 1360 |||||| ||||| || ||||||||||| |||||| |||||||| Sbjct: 1188 gtaccctgccaatgatcacaaggaggtcgccgtggtgccgtag 1230
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 139 bits (70), Expect = 3e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 1100 tgcgtggtcggggtggccaacgtctacatcggcctgcacacgtaccgggagaggaccggc 1159 |||||||| || || |||||||||||||||||| ||||||| |||| ||||||||||| Sbjct: 134474 tgcgtggtgggcgtcgccaacgtctacatcggcatgcacacctaccatgagaggaccggg 134533 Query: 1160 aggagcgtcgggctctggacggcgctcctcaccgccgaggtctccgccgtggcgctcgtc 1219 |||||||| ||| ||||||| ||||||||||| ||||| || ||| ||||| ||||| Sbjct: 134534 aggagcgtgaggccgtggacggtgctcctcaccgtggaggtgtcggccatggcgttcgtc 134593 Query: 1220 tacctcctccaggacaggtggaaccacatcgtccggca 1257 |||||| |||||||||||||||||||| |||| ||||| Sbjct: 134594 tacctcttccaggacaggtggaaccacgtcgtgcggca 134631 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 928 gctgtcgatcaccaacttcgagaacgccttcaacaacacccaccag 973 ||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 134207 gctgtcgataagcaacttcgagaacgccttcaacaacacacaccag 134252 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 586 agcatcaatgctactgcttggaagaaaaagact 618 |||||||||||||||| |||||||||||||||| Sbjct: 133646 agcatcaatgctactgtttggaagaaaaagact 133678 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 755 ctcaagctccacgccttcctcctctggtcgtcggtcggcttcctgatgccgatcggcgtg 814 ||||||||||| |||||||| |||||||| ||||| || ||| ||||||| || || || Sbjct: 133939 ctcaagctccatgccttcctgctctggtcttcggttggtttcttgatgccaataggagta 133998 Query: 815 ctgctgatcag 825 ||||| ||||| Sbjct: 133999 ctgctaatcag 134009 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1318 gtacccggccaacgaccacaaggaggtggccgtgatgccgtag 1360 |||||| ||||| || ||||||||||| |||||| |||||||| Sbjct: 134704 gtaccctgccaatgatcacaaggaggtcgccgtggtgccgtag 134746
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 139 bits (70), Expect = 3e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 1100 tgcgtggtcggggtggccaacgtctacatcggcctgcacacgtaccgggagaggaccggc 1159 |||||||| || || |||||||||||||||||| ||||||| |||| ||||||||||| Sbjct: 27904057 tgcgtggtgggcgtcgccaacgtctacatcggcatgcacacctaccatgagaggaccggg 27904116 Query: 1160 aggagcgtcgggctctggacggcgctcctcaccgccgaggtctccgccgtggcgctcgtc 1219 |||||||| ||| ||||||| ||||||||||| ||||| || ||| ||||| ||||| Sbjct: 27904117 aggagcgtgaggccgtggacggtgctcctcaccgtggaggtgtcggccatggcgttcgtc 27904176 Query: 1220 tacctcctccaggacaggtggaaccacatcgtccggca 1257 |||||| |||||||||||||||||||| |||| ||||| Sbjct: 27904177 tacctcttccaggacaggtggaaccacgtcgtgcggca 27904214 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 928 gctgtcgatcaccaacttcgagaacgccttcaacaacacccaccag 973 ||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 27903790 gctgtcgataagcaacttcgagaacgccttcaacaacacacaccag 27903835 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 586 agcatcaatgctactgcttggaagaaaaagact 618 |||||||||||||||| |||||||||||||||| Sbjct: 27903229 agcatcaatgctactgtttggaagaaaaagact 27903261 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 755 ctcaagctccacgccttcctcctctggtcgtcggtcggcttcctgatgccgatcggcgtg 814 ||||||||||| |||||||| |||||||| ||||| || ||| ||||||| || || || Sbjct: 27903522 ctcaagctccatgccttcctgctctggtcttcggttggtttcttgatgccaataggagta 27903581 Query: 815 ctgctgatcag 825 ||||| ||||| Sbjct: 27903582 ctgctaatcag 27903592 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1318 gtacccggccaacgaccacaaggaggtggccgtgatgccgtag 1360 |||||| ||||| || ||||||||||| |||||| |||||||| Sbjct: 27904287 gtaccctgccaatgatcacaaggaggtcgccgtggtgccgtag 27904329
>dbj|AK063277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-C06, full insert sequence Length = 1378 Score = 139 bits (70), Expect = 3e-29 Identities = 136/158 (86%) Strand = Plus / Plus Query: 1100 tgcgtggtcggggtggccaacgtctacatcggcctgcacacgtaccgggagaggaccggc 1159 |||||||| || || |||||||||||||||||| ||||||| |||| ||||||||||| Sbjct: 958 tgcgtggtgggcgtcgccaacgtctacatcggcatgcacacctaccatgagaggaccggg 1017 Query: 1160 aggagcgtcgggctctggacggcgctcctcaccgccgaggtctccgccgtggcgctcgtc 1219 |||||||| ||| ||||||| ||||||||||| ||||| || ||| ||||| ||||| Sbjct: 1018 aggagcgtgaggccgtggacggtgctcctcaccgtggaggtgtcggccatggcgttcgtc 1077 Query: 1220 tacctcctccaggacaggtggaaccacatcgtccggca 1257 |||||| |||||||||||||||||||| |||| ||||| Sbjct: 1078 tacctcttccaggacaggtggaaccacgtcgtgcggca 1115 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 707 tacaagatggtccagccattggagctgacgcccaagctgtcgctgcagctcaagctccac 766 |||||||| |||||||| |||||||| || ||||| || || || || ||||||||||| Sbjct: 565 tacaagattgtccagcctttggagctcacacccaaactctcccttcaactcaagctccat 624 Query: 767 gccttcctcctctggtcgtcggtcggcttcctgatgccgatcggcgtgctgctgatcag 825 |||||||| |||||||| ||||| || ||| ||||||| || || || ||||| ||||| Sbjct: 625 gccttcctgctctggtcttcggttggtttcttgatgccaataggagtactgctaatcag 683 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 928 gctgtcgatcaccaacttcgagaacgccttcaacaacacccaccag 973 ||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 786 gctgtcgataagcaacttcgagaacgccttcaacaacacacaccag 831 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 586 agcatcaatgctactgcttggaagaaaaagact 618 |||||||||||||||| |||||||||||||||| Sbjct: 441 agcatcaatgctactgtttggaagaaaaagact 473 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1318 gtacccggccaacgaccacaaggaggtggccgtgatgccgtag 1360 |||||| ||||| || ||||||||||| |||||| |||||||| Sbjct: 1188 gtaccctgccaatgatcacaaggaggtcgccgtggtgccgtag 1230
>gb|AF238500.2| Azotobacter vinelandii isochorismate synthase (csbC) gene, partial cds; and CsbX (csbX) gene, complete cds Length = 2944 Score = 48.1 bits (24), Expect = 0.098 Identities = 30/32 (93%) Strand = Plus / Plus Query: 900 gcgtggccctggccaccgccgccgcggcgctg 931 |||||||||||||| ||| ||||||||||||| Sbjct: 2362 gcgtggccctggccgccggcgccgcggcgctg 2393
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 48.1 bits (24), Expect = 0.098 Identities = 24/24 (100%) Strand = Plus / Minus Query: 980 gggctcgccctctacggcctcgtc 1003 |||||||||||||||||||||||| Sbjct: 58980 gggctcgccctctacggcctcgtc 58957
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 48.1 bits (24), Expect = 0.098 Identities = 24/24 (100%) Strand = Plus / Plus Query: 980 gggctcgccctctacggcctcgtc 1003 |||||||||||||||||||||||| Sbjct: 1853222 gggctcgccctctacggcctcgtc 1853245
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 904 ggccctggccaccgccgccgcggcgctgtc 933 |||||||||||||||| | ||||||||||| Sbjct: 873261 ggccctggccaccgcctcggcggcgctgtc 873290 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 gccctggccaccgccgccgcg 925 ||||||||||||||||||||| Sbjct: 2441688 gccctggccaccgccgccgcg 2441668
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1078 ctggctgctgggggtggcggtg 1099 |||||||||||||||||||||| Sbjct: 825781 ctggctgctgggggtggcggtg 825802
>gb|AC187106.2| Gallus gallus BAC clone CH261-148O18 from chromosome z, complete sequence Length = 184475 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 tccagcttggttcagttcagtt 511 |||||||||||||||||||||| Sbjct: 144190 tccagcttggttcagttcagtt 144211
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 748 gctgcagctcaagctccacgcc 769 |||||||||||||||||||||| Sbjct: 4726490 gctgcagctcaagctccacgcc 4726469
>ref|XM_541851.2| PREDICTED: Canis familiaris similar to Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen) (LOC484735), mRNA Length = 8008 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1205 gccgtggcgctcgtctacctcctccaggac 1234 |||||||| |||||| |||||||||||||| Sbjct: 1353 gccgtggctctcgtccacctcctccaggac 1382
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1088 ggggtggcggtgtgcgtggtcggggtggcc 1117 ||||| ||||||||||||| |||||||||| Sbjct: 16594278 ggggtcgcggtgtgcgtggccggggtggcc 16594249
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1174 ctggacggcgctcctcaccgcc 1195 |||||||||||||||||||||| Sbjct: 174176 ctggacggcgctcctcaccgcc 174197
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 904 ggccctggccaccgccgccgcggcgc 929 |||||||| ||||||||||||||||| Sbjct: 1233112 ggccctggtcaccgccgccgcggcgc 1233087
>emb|AM392642.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (NRAP gene), clone DKFZp451J094.1E2 Length = 5235 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 848 tggtccagccattggagctga 868
>emb|AM393795.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (NRAP gene), clone DKFZp451E223.1E2 Length = 5249 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 858 tggtccagccattggagctga 878
>emb|AM393530.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (NRAP gene), clone DKFZp451J094.1E1 Length = 5235 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 848 tggtccagccattggagctga 868
>emb|AM393347.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (NRAP gene), clone DKFZp451E223.1E1 Length = 5251 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 858 tggtccagccattggagctga 878
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 783 cgtcggtcggcttcctgatgccgatcggc 811 |||||||||||||||||||| ||| |||| Sbjct: 1099073 cgtcggtcggcttcctgatgtcgaacggc 1099045
>gb|BC126407.1| Homo sapiens nebulin-related anchoring protein, mRNA (cDNA clone MGC:161685 IMAGE:8992123), complete cds Length = 5312 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 852 tggtccagccattggagctga 872
>ref|NM_001067388.1| Oryza sativa (japonica cultivar-group) Os08g0116400 (Os08g0116400) mRNA, partial cds Length = 1205 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 236 ccggcgtggccctggccaccg 216
>ref|XM_001148506.1| PREDICTED: Pan troglodytes nebulin-related anchoring protein, transcript variant 1 (NRAP), mRNA Length = 6013 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 1016 tggtccagccattggagctga 1036
>ref|XM_521607.2| PREDICTED: Pan troglodytes nebulin-related anchoring protein, transcript variant 2 (NRAP), mRNA Length = 6121 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 1016 tggtccagccattggagctga 1036
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 783 cgtcggtcggcttcctgatgccgatcggc 811 |||||||||||||||||||| ||| |||| Sbjct: 554429 cgtcggtcggcttcctgatgtcgaacggc 554401
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 916 cgccgccgcggcgctgtcgat 936 ||||||||||||||||||||| Sbjct: 938692 cgccgccgcggcgctgtcgat 938712
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 885 ccgcgcaggtcaccggcgtgg 905 ||||||||||||||||||||| Sbjct: 1111504 ccgcgcaggtcaccggcgtgg 1111524
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 gtagcatgaggtggtagagggagag 374 ||||||||||| ||||||||||||| Sbjct: 33829 gtagcatgagggggtagagggagag 33805
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 897 ccggcgtggccctggccaccgccgccgcg 925 |||||||||| |||||| ||||||||||| Sbjct: 87391 ccggcgtggcgctggccgccgccgccgcg 87419
>gb|BC015881.2| Homo sapiens stimulated by retinoic acid gene 6 homolog (mouse), mRNA (cDNA clone IMAGE:3530901), complete cds Length = 1904 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1068 accttgctcactggctgctgg 1088 ||||||||||||||||||||| Sbjct: 1404 accttgctcactggctgctgg 1424
>ref|NM_006175.3| Homo sapiens nebulin-related anchoring protein (NRAP), transcript variant 1, mRNA Length = 5417 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 992 tggtccagccattggagctga 1012
>ref|NM_198060.2| Homo sapiens nebulin-related anchoring protein (NRAP), transcript variant 2, mRNA Length = 5522 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 992 tggtccagccattggagctga 1012
>gb|AY177621.1| Homo sapiens nebulin-related anchoring protein isoform C (NRAP) mRNA, complete cds Length = 5370 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 969 tggtccagccattggagctga 989
>gb|AY177620.1| Homo sapiens nebulin-related anchoring protein isoform S (NRAP) mRNA, complete cds Length = 5475 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 969 tggtccagccattggagctga 989
>dbj|AK056969.1| Homo sapiens cDNA FLJ32407 fis, clone SKMUS2000458, moderately similar to Mus musculus N-RAP mRNA Length = 1905 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 993 tggtccagccattggagctga 1013
>dbj|AK056605.1| Homo sapiens cDNA FLJ32043 fis, clone NTONG2000966, weakly similar to Mus musculus N-RAP mRNA Length = 2692 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 26 tggtccagccattggagctga 46
>gb|AC164610.3| Mus musculus BAC clone RP23-422D16 from chromosome 6, complete sequence Length = 200529 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 cattcaccttctcctccttct 421 ||||||||||||||||||||| Sbjct: 182331 cattcaccttctcctccttct 182311
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 465256 ccggcgtggccctggccaccg 465236
>gb|AY081943.2| Homo sapiens nebulin-related anchoring protein mRNA, complete cds Length = 5417 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 993 tggtccagccattggagctga 1013
>gb|AC008733.9| Homo sapiens chromosome 19 clone CTD-2525J15, complete sequence Length = 189486 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 cttcctgctgagggaagattt 577 ||||||||||||||||||||| Sbjct: 141940 cttcctgctgagggaagattt 141960
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 892001 ccggcgtggccctggccaccg 892021
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 904 ggccctggccaccgccgccgcggcg 928 |||| |||||||||||||||||||| Sbjct: 5983752 ggccgtggccaccgccgccgcggcg 5983776
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ctgttcctggcttcctgctga 567 ||||||||||||||||||||| Sbjct: 5487348 ctgttcctggcttcctgctga 5487368
>emb|AJ786383.1| Streptomyces chartreusis HKI-249 chartreusin biosynthesis gene cluster B Length = 17540 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 896 accggcgtggccctggccaccgccg 920 |||||||| |||||||||||||||| Sbjct: 6837 accggcgtcgccctggccaccgccg 6861
>emb|AL390197.19| Human DNA sequence from clone RP11-190F19 on chromosome 10 Contains the gene for a novel protein similar to HGF activator (HGFAC) and the NRAP gene for nebulin-related anchoring protein, complete sequence Length = 188349 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 164374 tggtccagccattggagctga 164354
>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence Length = 78437 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 gttcattcaccttctcctcct 418 ||||||||||||||||||||| Sbjct: 35304 gttcattcaccttctcctcct 35284
>gb|AC009194.9| Homo sapiens, clone RP11-44B13, complete sequence Length = 179203 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 cttcctgctgagggaagattt 577 ||||||||||||||||||||| Sbjct: 66735 cttcctgctgagggaagattt 66715
>gb|AY283928.2| Bacteriophage KVP40, complete genome Length = 244834 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 tcagttcagttgcttgctctt 521 ||||||||||||||||||||| Sbjct: 44066 tcagttcagttgcttgctctt 44046
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 904 ggccctggccaccgccgccgc 924 ||||||||||||||||||||| Sbjct: 584943 ggccctggccaccgccgccgc 584923
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 904 ggccctggccaccgccgccgcggcg 928 ||||| ||||||||||||||||||| Sbjct: 78272 ggcccaggccaccgccgccgcggcg 78296
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 905 gccctggccaccgccgccgcggcgc 929 ||||||| ||||||||||||||||| Sbjct: 112098 gccctgggcaccgccgccgcggcgc 112074
>emb|AL832330.2|HSM803638 Homo sapiens mRNA; cDNA DKFZp451G165 (from clone DKFZp451G165) Length = 5464 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 943 tggtccagccattggagctga 963
>emb|AL832025.2|HSM803332 Homo sapiens mRNA; cDNA DKFZp451J094 (from clone DKFZp451J094); complete cds Length = 5503 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 943 tggtccagccattggagctga 963
>emb|AL831980.2|HSM803287 Homo sapiens mRNA; cDNA DKFZp451E223 (from clone DKFZp451E223); complete cds Length = 5469 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 943 tggtccagccattggagctga 963
>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial) genes Length = 60726 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 gttcattcaccttctcctcct 418 ||||||||||||||||||||| Sbjct: 41432 gttcattcaccttctcctcct 41412
>gb|AC023545.16| Homo sapiens chromosome 15, clone RP11-665J16, complete sequence Length = 108173 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1068 accttgctcactggctgctgg 1088 ||||||||||||||||||||| Sbjct: 86495 accttgctcactggctgctgg 86475
>emb|BX640682.2|HSM806746 Homo sapiens mRNA; cDNA DKFZp451L056 (from clone DKFZp451L056) Length = 5472 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 943 tggtccagccattggagctga 963
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ctgttcctggcttcctgctga 567 ||||||||||||||||||||| Sbjct: 140929 ctgttcctggcttcctgctga 140949
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ctgttcctggcttcctgctga 567 ||||||||||||||||||||| Sbjct: 32083 ctgttcctggcttcctgctga 32103
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 54739 ccggcgtggccctggccaccg 54759
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 904 ggccctggccaccgccgccgcggcg 928 |||| |||||||||||||||||||| Sbjct: 38922 ggccgtggccaccgccgccgcggcg 38946
>gb|AC023300.19| Homo sapiens chromosome 15, clone RP11-60L3, complete sequence Length = 147392 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1068 accttgctcactggctgctgg 1088 ||||||||||||||||||||| Sbjct: 128984 accttgctcactggctgctgg 129004
>dbj|AK103042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F04, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 617 ccggcgtggccctggccaccg 597
>dbj|AK061804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A01, full insert sequence Length = 1205 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 897 ccggcgtggccctggccaccg 917 ||||||||||||||||||||| Sbjct: 236 ccggcgtggccctggccaccg 216
>emb|BX647658.1|HSM807804 Homo sapiens mRNA; cDNA DKFZp451B081 (from clone DKFZp451B081) Length = 5539 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 1017 tggtccagccattggagctga 1037
>emb|BX641052.1|HSM806747 Homo sapiens mRNA; cDNA DKFZp451M216 (from clone DKFZp451M216) Length = 5517 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 980 tggtccagccattggagctga 1000
>emb|BX640730.1|HSM806804 Homo sapiens mRNA; cDNA DKFZp451P181 (from clone DKFZp451P181); complete cds Length = 5622 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 714 tggtccagccattggagctga 734 ||||||||||||||||||||| Sbjct: 1100 tggtccagccattggagctga 1120
>gb|AF038027.1|AF038027 Mycobacterium marinum ferric uptake regulator homolog (furA) gene, complete cds Length = 935 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 gccctggccaccgccgccgcg 925 ||||||||||||||||||||| Sbjct: 904 gccctggccaccgccgccgcg 884
>gb|M18973.1|MPUCCHM Micromonospora echinospora calichemicin antitumor antibiotic gene, 5' end Length = 398 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 766 cgccttcctcctctggtcgtc 786 ||||||||||||||||||||| Sbjct: 301 cgccttcctcctctggtcgtc 281 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 256,827,804 Number of extensions: 13823781 Number of successful extensions: 318035 Number of sequences better than 10.0: 69 Number of HSP's gapped: 318035 Number of HSP's successfully gapped: 86 Length of query: 1586 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1563 Effective length of database: 18,503,978,556 Effective search space: 28921718483028 Effective search space used: 28921718483028 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
