>O74024:DHE3_THEPR Glutamate dehydrogenase - Thermococcus profundus|
Length = 419
Score = 95.5 bits (236), Expect(2) = 3e-30
Identities = 65/172 (37%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +QY+ I E LE P R VP D G V V GFRVQ + A GP +GG+R
Sbjct: 14 LERAAQYMDISEEALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP+ LS K LA T K A+ GG GG +PK SE E R ++++ +Y
Sbjct: 74 WHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYR---RLSGHFQGNFTGPKIFWSGVL 1453
+GP D PA DV P+ MG++ +Y R G G TG + G L
Sbjct: 134 VIGPWTDIPAPDVYTNPKIMGWMMDEYETIMRRKGPAFGVITGKPLSIGGSL 185
Score = 59.3 bits (142), Expect(2) = 3e-30
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 3/257 (1%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
L + GS R AT G +F R + +LKG + A+ G G + + L+ E +
Sbjct: 179 LSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAK--LAKEQLG 236
Query: 1615 VTV---SDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQC 1785
+TV SDS G +++ DG D + + K + S+K+ FP A I + + +
Sbjct: 237 MTVVAVSDSRGGIYNPDGLDPDE---VLKWKREHGSVKD----FPGATNITNEELLELEV 289
Query: 1786 DIAFPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXX 1965
D+ P A + I + A +I +++ E +N P T +A DILR
Sbjct: 290 DVLAPAAIEEVITEKNADNI---KAKIVAEVANGPVTPEADDILREKGILQIPDFLCNAG 346
Query: 1966 XXXXXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQEYGILKENPESLVHGAN 2145
E + W+ E+ K+ + + + + + Y K+ + A
Sbjct: 347 GVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAF------WEVYNTHKDKNIHMRDAAY 400
Query: 2146 ISAFLNIAQAMTDQGCV 2196
+ A + QAM D+G V
Sbjct: 401 VVAVSRVYQAMKDRGWV 417
>P96110:DHE3_THEMA Glutamate dehydrogenase - Thermotoga maritima|
Length = 416
Score = 92.8 bits (229), Expect(2) = 2e-28
Identities = 53/140 (37%), Positives = 67/140 (47%)
Frame = +2
Query: 986 ILERLLEPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFL 1165
+ E L P+R I P D G V V G+RVQ + A GP +GG+R+HP + L K L
Sbjct: 27 LAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKAL 86
Query: 1166 AFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDV 1345
AF T K A+ GG GG DPK S E+ R + F E+ +GP D PA DV
Sbjct: 87 AFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRNELERLSRRFFSEIQVIIGPYNDIPAPDV 146
Query: 1346 GVGPREMGFLFGQYRRLSGH 1405
M + Y GH
Sbjct: 147 NTNADVMAWYMDTYSMNVGH 166
Score = 56.2 bits (134), Expect(2) = 2e-28
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 2/222 (0%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCE--AIPVT 1620
GS R EATG G+ A + + + + K A+ G G + L+S E + V
Sbjct: 181 GSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAA-LLISQELGSKVVA 239
Query: 1621 VSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAFP 1800
VSDS G +++ +GFD + LIR K + T+P+ + I + + DI P
Sbjct: 240 VSDSRGGIYNPEGFDVEE--LIRYKKEHGT-----VVTYPKGERITNEELLELDVDILVP 292
Query: 1801 CASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXXXX 1980
A + I G A I + +VE +N P T +A +IL
Sbjct: 293 AALEGAIHAGNAERI---KAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVS 349
Query: 1981 ELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQEYGI 2106
E + W ++ N +++ +K ++ MK ++Y +
Sbjct: 350 YFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNV 391
>P80319:DHE3_PYRFU Glutamate dehydrogenase - Pyrococcus furiosus|
Length = 420
Score = 95.9 bits (237), Expect(2) = 3e-28
Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +QY++I E LE P+R +P D G V V GFRVQ + A GP +GG+R
Sbjct: 14 LERAAQYMEISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP LS K LA T K A+ GG GG DPK S+ E R + ++ +Y
Sbjct: 74 WHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYRRLS 1399
+ P +D PA DV P+ M ++ +Y +S
Sbjct: 134 VISPYEDIPAPDVYTNPQIMAWMMDEYETIS 164
Score = 52.4 bits (124), Expect(2) = 3e-28
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 4/258 (1%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKE-LKGLRCAISGSGKIAMHVLEKLLSCE-- 1605
L + GS R EAT G + R + + LKG AI G G A + L K++S +
Sbjct: 179 LSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGN-AGYYLAKIMSEDFG 237
Query: 1606 AIPVTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQC 1785
V VSDS+G +++ DG + + +N +K FP A I + + +
Sbjct: 238 MKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGS-------VKDFPGATNITNEELLELEV 290
Query: 1786 DIAFPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXX 1965
D+ P A + I + A +I + +++ E +N P T +A +IL
Sbjct: 291 DVLAPAAIEEVITKKNADNIKA---KIVAEVANGPVTPEADEILFEKGILQIPDFLCNAG 347
Query: 1966 XXXXXELELNPEFSLMQWSVEDFENKIQEAV-KQTYDRSMKAAQEYGILKENPESLVHGA 2142
E + W++E+ ++ + + K YD Y I KE + A
Sbjct: 348 GVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYD-------VYNIAKEKNIHMRDAA 400
Query: 2143 NISAFLNIAQAMTDQGCV 2196
+ A + QAM D+G V
Sbjct: 401 YVVAVQRVYQAMLDRGWV 418
>Q47950:DHE3_PYRAB Glutamate dehydrogenase - Pyrococcus abyssi|
Length = 420
Score = 95.9 bits (237), Expect(2) = 3e-28
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +QY++I E LE P+R +P D G V V GFRVQ++ A GP +GG+R
Sbjct: 14 LERAAQYMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP LS K LA T K A+ GG GG DPK S+ E R + ++ +Y
Sbjct: 74 WHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYRRLS 1399
+ P +D PA DV P+ M ++ +Y ++
Sbjct: 134 VISPYEDIPAPDVYTNPQIMAWMMDEYETIA 164
Score = 52.4 bits (124), Expect(2) = 3e-28
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 4/258 (1%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMN-KELKGLRCAISGSGKIAMHVLEKLLSCE-- 1605
L + GS R EAT G + R + +LKG AI G G A + L K++S +
Sbjct: 179 LSIGGSLGRNEATARGASYTIREAAKVLGWDDLKGKTIAIQGYGN-AGYYLAKIMSEDYG 237
Query: 1606 AIPVTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQC 1785
V VSDS+G +++ DG + + + K + S+K+ FP A I + + +
Sbjct: 238 MKVVAVSDSKGGIYNPDGLNADE---VLKWKREHGSVKD----FPGATNITNEELLELEV 290
Query: 1786 DIAFPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXX 1965
D+ P A + I + A +I +++ E +N P T +A +IL
Sbjct: 291 DVLAPAAIEEVITKKNADNI---KAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAG 347
Query: 1966 XXXXXELELNPEFSLMQWSVEDFENKI-QEAVKQTYDRSMKAAQEYGILKENPESLVHGA 2142
E + W++E+ K+ ++ K YD Y KE + A
Sbjct: 348 GVTVSYFEWVQNITGYYWTLEEVREKLDKKMTKAFYD-------VYNTAKEKNIHMRDAA 400
Query: 2143 NISAFLNIAQAMTDQGCV 2196
+ A + QAM D+G V
Sbjct: 401 YVVAVQRVYQAMLDRGWV 418
>O52310:DHE3_PYRHO Glutamate dehydrogenase - Pyrococcus horikoshii|
Length = 420
Score = 93.6 bits (231), Expect(2) = 6e-27
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +Q+++I E LE P+R +P D G V V GFRVQ++ A GP +GG+R
Sbjct: 14 LERAAQHMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP LS K LA T K A+ GG GG DPK S+ E R + ++ +Y
Sbjct: 74 WHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAVYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYRRLS 1399
+ P +D PA DV P+ M ++ +Y ++
Sbjct: 134 IISPYEDIPAPDVYTNPQIMAWMMDEYETIA 164
Score = 50.1 bits (118), Expect(2) = 6e-27
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 5/259 (1%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKE-LKGLRCAISGSGKIAMHVLEKLLSCE-- 1605
L + GS R EAT G + R + + LKG AI G G A + L K++S +
Sbjct: 179 LSIGGSLGRNEATARGASYTIREAAKVLGWDGLKGKTIAIQGYGN-AGYYLAKIMSEDYG 237
Query: 1606 AIPVTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQC 1785
V VSDS+G +++ DG + + + K + S+K+ FP A I++ +
Sbjct: 238 MKVVAVSDSKGGIYNPDGLNADE---VLKWKREHGSVKD----FPGATNISNEELLELDV 290
Query: 1786 DIAFPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXX 1965
D+ P A + I + A +I +++ E +N P T +A +IL
Sbjct: 291 DVLAPAAIEEVITKKNADNI---KAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAG 347
Query: 1966 XXXXXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAA--QEYGILKENPESLVHG 2139
E + W++E+ V++ D+ M A Y KE +
Sbjct: 348 GVTVSYFEWVQNITGYYWTLEE--------VRERLDKKMTKAFYDVYNTAKEKNIHMRDA 399
Query: 2140 ANISAFLNIAQAMTDQGCV 2196
A + A + QAM D+G V
Sbjct: 400 AYVVAVQRVYQAMLDRGWV 418
>Q7A1B9:DHE2_STAAW NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
MW2)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>Q6GAW8:DHE2_STAAS NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
MSSA476)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>Q6GID0:DHE2_STAAR NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
MRSA252)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>Q7A6H8:DHE2_STAAN NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
N315)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>Q99VD0:DHE2_STAAM NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
Mu50 / ATCC 700699)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>Q5HHC7:DHE2_STAAC NAD-specific glutamate dehydrogenase - Staphylococcus aureus (strain|
COL)
Length = 414
Score = 84.3 bits (207), Expect(2) = 9e-26
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 1004 EPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTL 1183
EP R R+P D G V G+R Q + A+GP +GG+RFHP ++ K L+ TL
Sbjct: 34 EPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTL 93
Query: 1184 KNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPRE 1363
K + GG GG DP+ S EV R + ++ + +++GP++D PA DV +
Sbjct: 94 KCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQI 153
Query: 1364 MGFLFGQYRRLSG-HFQGNFTGPKIFWSG 1447
M ++ +Y L + G TG I G
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGG 182
Score = 55.5 bits (132), Expect(2) = 9e-26
Identities = 53/220 (24%), Positives = 88/220 (40%)
Frame = +1
Query: 1435 LLVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIP 1614
+++ GS R +T G+V N +++G + I G G + + L A
Sbjct: 178 IVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKI 237
Query: 1615 VTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIA 1794
V +SD+ G L D +G D + Y L R + S F I++ + + CDI
Sbjct: 238 VGISDAYGALHDPNGLD-IDYLLDR-----RDSFGTVTNLFEET--ISNKELFELDCDIL 289
Query: 1795 FPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXX 1974
P A N+I + A I +S ++VE +N P T +A IL
Sbjct: 290 VPAAISNQITEDNAHDIKAS---IVVEAANGPTTPEATRILTERGILLVPDVLASAGGVT 346
Query: 1975 XXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQ 2094
E WS E+ K++E ++ +D + +Q
Sbjct: 347 VSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQ 386
>O59650:DHE3_PYRKO Glutamate dehydrogenase - Pyrococcus kodakaraensis (Thermococcus|
kodakaraensis)
Length = 421
Score = 93.6 bits (231), Expect(2) = 2e-25
Identities = 63/163 (38%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +Q++ I E LE P R VP D G V V GFRVQ + A GP +GG+R
Sbjct: 14 LERAAQFMDISEEALEWLKRPMRIVEVSVPVEMDDGSVKVFTGFRVQHNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP+ LS K LA T K A+ GG GG DPK SE E R +S++ +Y
Sbjct: 74 WHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVDPKKLSEREQERLARSYIRAVYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYR---RLSGHFQGNFTG 1426
+GP D PA DV P+ M ++ +Y R G G TG
Sbjct: 134 VIGPWTDIPAPDVYTNPKIMAWMMDEYETIMRRKGPAFGVITG 176
Score = 44.7 bits (104), Expect(2) = 2e-25
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Frame = +1
Query: 1441 VWGSSFRTEATGYGLVFFARVVLADMN-KELKGLRCAISGSGKIAMHVLEKLLSCE--AI 1611
V G R +AT G F R + +LKG AI G G A + L K++S E
Sbjct: 181 VGGIVARMDATARGAAFTIREAAKALGWDDLKGKTIAIQGYGN-AGYYLHKIMSEEFGMK 239
Query: 1612 PVTVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDI 1791
V VSDS+G +++ DG L K + S+K+ P + I + + + DI
Sbjct: 240 VVAVSDSKGGIYNPDGLPPADEVL--KWKKEHGSVKD----MPGTQNITNEELLELEVDI 293
Query: 1792 AFPCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXX 1971
P A + I + A ++ +++ E +N P T +A +IL
Sbjct: 294 LAPSAIEGVITKENADNV---KAKIVAEVANGPVTPEADEILHEKGILQIPDFLCNAGGV 350
Query: 1972 XXXELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQEYGILKENPESLVH---GA 2142
E + W+VE+ ++ + + + + + + + E +H A
Sbjct: 351 TVSYFEWVQNINGFYWTVEETRKRLDDKMTKAF---------WDVFNTHKEKNIHMRDAA 401
Query: 2143 NISAFLNIAQAMTDQGCV 2196
+ A + +AM +G V
Sbjct: 402 YVVAVSRVYEAMKHRGWV 419
>P52596:DHE3_VITVI Glutamate dehydrogenase - Vitis vinifera (Grape)|
Length = 411
Score = 81.3 bits (199), Expect(2) = 4e-25
Identities = 46/136 (33%), Positives = 65/136 (47%)
Frame = +2
Query: 1046 DRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAG 1225
D G + GFRVQ A GP +GG+R+HP ++ LA T K A+ GGA G
Sbjct: 44 DDGSLATYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVVDIPYGGAKG 103
Query: 1226 GSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPREMGFLFGQYRRLSGH 1405
G PK S E+ R + F +++ +G D PA D+G + M ++ +Y + GH
Sbjct: 104 GIGCTPKDLSMSELERLTRVFTQKIHDLIGTHTDVPAPDMGTNAQTMAWILDEYSKFHGH 163
Query: 1406 FQGNFTGPKIFWSGVL 1453
TG I G L
Sbjct: 164 SPAVVTGKPIALGGSL 179
Score = 56.2 bits (134), Expect(2) = 4e-25
Identities = 57/248 (22%), Positives = 94/248 (37%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPVTVS 1626
GS R ATG G+VF +LA K +KGL I G G + V + + VS
Sbjct: 177 GSLGREAATGRGVVFATEALLAQHGKSIKGLTFVIQGFGNVGSWVARLIGERGGKIIAVS 236
Query: 1627 DSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAFPCA 1806
D G + + +G D V L+R+ + L F +++ + +CD+ PCA
Sbjct: 237 DVTGAVKNQNGLDIV--DLLRH-----KEETGCLTNFSGGDHMDPNELLTHECDVLIPCA 289
Query: 1807 SQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXXXXEL 1986
+++ A + + ++E +N P +A +IL
Sbjct: 290 LGGVLNKENAADV---KAKFIIEAANHPTDPEADEILSKKGGVILPDIYANAGGVTVSYF 346
Query: 1987 ELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQEYGILKENPESLVHGANISAFLNI 2166
E W E N++Q+ + + + Q + SL GA A +
Sbjct: 347 EWVQNIQGFMWEEEKVNNELQKYMTKAFHNIKAMCQSHNC------SLRMGAFTLAVNRV 400
Query: 2167 AQAMTDQG 2190
A A T +G
Sbjct: 401 ACATTLRG 408
>Q9LEC8:DHEB_NICPL Glutamate dehydrogenase B - Nicotiana plumbaginifolia|
(Leadwort-leaved tobacco)
Length = 411
Score = 80.5 bits (197), Expect(2) = 1e-24
Identities = 45/136 (33%), Positives = 66/136 (48%)
Frame = +2
Query: 1046 DRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAG 1225
D G + GFRVQ A GP +GG+R+HP ++ LA T K A++ GGA G
Sbjct: 44 DDGSLATFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKG 103
Query: 1226 GSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPREMGFLFGQYRRLSGH 1405
G P S E+ R + F +++ +G D PA D+G P+ M ++ +Y + G+
Sbjct: 104 GIGCSPSDLSISELERLTRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGY 163
Query: 1406 FQGNFTGPKIFWSGVL 1453
TG I G L
Sbjct: 164 SPAVVTGKPIDLGGSL 179
Score = 55.5 bits (132), Expect(2) = 1e-24
Identities = 44/157 (28%), Positives = 71/157 (45%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPVTVS 1626
GS R ATG G++F A +L D K + G R + G G + + + V VS
Sbjct: 177 GSLGRDAATGRGVLFAAEALLRDHGKSIAGQRFVVQGFGNVGSWAAQLITEQGGKIVAVS 236
Query: 1627 DSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAFPCA 1806
D G + + +G D +L++++K + +K F A I+ E CD+ P A
Sbjct: 237 DITGAIKNKNGIDIA--SLLKHVKENRG-----VKGFHGADSIDPNSILVEDCDVLIPAA 289
Query: 1807 SQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDIL 1917
I++ A I + +VE +N P +A +IL
Sbjct: 290 LGGVINRDNAKDI---KAKFIVEAANHPTDPEADEIL 323
>P29051:DHE41_HALSA NAD-specific glutamate dehydrogenase A - Halobacterium salinarium|
(Halobacterium halobium)
Length = 435
Score = 87.4 bits (215), Expect(2) = 8e-23
Identities = 50/139 (35%), Positives = 67/139 (48%)
Frame = +2
Query: 986 ILERLLEPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFL 1165
I+ERL P++ +P D G V V G+R Q GP +GGLR+HP + L
Sbjct: 48 IVERLKYPKKVHEVTIPIERDDGTVEVFTGYRAQHDSVRGPYKGGLRYHPDVTRDECVGL 107
Query: 1166 AFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDV 1345
T K A+ GGA GG +PK S E R + F E+ +GP+QD PA D+
Sbjct: 108 GMWMTWKCAVMDLPFGGAKGGVAVNPKELSPEEKERLTRRFTQEIRDVIGPNQDIPAPDM 167
Query: 1346 GVGPREMGFLFGQYRRLSG 1402
G P+ M +L Y G
Sbjct: 168 GTDPQTMAWLMDAYSMQEG 186
Score = 42.4 bits (98), Expect(2) = 8e-23
Identities = 49/220 (22%), Positives = 85/220 (38%)
Frame = +1
Query: 1438 LVWGSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPV 1617
+V GS R EA G + ++V ++ L A+ G G + + L A V
Sbjct: 199 VVGGSEGREEAPGRSVAIITQLVCEYYDQPLDETTVAVQGYGSVGANAARLLDKWGATIV 258
Query: 1618 TVSDSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAF 1797
+SD G +++ DG D + + + ++ Y T I++ + D+
Sbjct: 259 AISDVNGAMYEPDGIDTAS---VPSHDEEPEAVTTYADT-----VISNEELLTLDVDVLI 310
Query: 1798 PCASQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDILRXXXXXXXXXXXXXXXXXXX 1977
P A N I + A +I + ++VE +N P T A IL
Sbjct: 311 PAALGNVITKENAEAIAAD---LVVEGANGPTTSTADSILADRDVAVIPDILANAGGVTV 367
Query: 1978 XELELNPEFSLMQWSVEDFENKIQEAVKQTYDRSMKAAQE 2097
E + + WS+E +++ EA Q R++K E
Sbjct: 368 SYFEWLQDINRRAWSLERVNDEL-EAEMQAAWRAVKDEYE 406
>Q43260:DHE3_MAIZE Glutamate dehydrogenase - Zea mays (Maize)|
Length = 411
Score = 71.6 bits (174), Expect(2) = 1e-20
Identities = 42/136 (30%), Positives = 64/136 (47%)
Frame = +2
Query: 1046 DRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAG 1225
D G + GFRVQ A GP +GG+R+H ++ LA T K A++ GGA G
Sbjct: 44 DDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKG 103
Query: 1226 GSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDVGVGPREMGFLFGQYRRLSGH 1405
G P S E+ R + F +++ +G D PA D+G + M ++ +Y + G+
Sbjct: 104 GIGCSPGDLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGY 163
Query: 1406 FQGNFTGPKIFWSGVL 1453
TG + G L
Sbjct: 164 SPAVVTGKPVDLGGSL 179
Score = 50.8 bits (120), Expect(2) = 1e-20
Identities = 41/157 (26%), Positives = 70/157 (44%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPVTVS 1626
GS R ATG G++F +LA+ K + G R I G G + + + + +S
Sbjct: 177 GSLGRDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAIS 236
Query: 1627 DSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAFPCA 1806
D G + + DG D + L+++ A+ + +K F I E+CD+ P A
Sbjct: 237 DVTGAVKNVDGLDIAQ--LVKH-SAENKG----IKGFKGGDAIAPDSLLTEECDVLIPAA 289
Query: 1807 SQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDIL 1917
I++ A I + ++E +N P +A +IL
Sbjct: 290 LGGVINKDNANDI---KAKYIIEAANHPTDPEADEIL 323
>Q9HSM4:DHE42_HALSA NADP-specific glutamate dehydrogenase B - Halobacterium salinarium|
(Halobacterium halobium)
Length = 429
Score = 84.7 bits (208), Expect(2) = 2e-18
Identities = 51/139 (36%), Positives = 65/139 (46%)
Frame = +2
Query: 986 ILERLLEPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFL 1165
++ERL P R VP D G V V G+R Q GP +GGLR+HP ++ L
Sbjct: 41 VIERLTHPTRVVQVSVPVERDDGTVTVYDGYRAQHDDVRGPYKGGLRYHPGVSAEECVGL 100
Query: 1166 AFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDV 1345
+ T K A+ GGA GG DPK S E R + F EL +GP QD PA D+
Sbjct: 101 SMWMTWKCAVMDLPFGGAKGGVVVDPKTLSADEHERLTRRFAAELRDEVGPSQDIPAPDM 160
Query: 1346 GVGPREMGFLFGQYRRLSG 1402
G + M + Y G
Sbjct: 161 GTDAQTMAWFMDAYSMQQG 179
Score = 30.0 bits (66), Expect(2) = 2e-18
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPVTVS 1626
GS R EA G + R + + + A+ G G + + L A V VS
Sbjct: 195 GSHGRAEAPGRSVAIATREAINYYDIPIDDATVAVQGYGSVGANAALLLDDWGARVVAVS 254
Query: 1627 DSEGYLFDGDGFD 1665
D G + D DG D
Sbjct: 255 DVNGGVLDTDGLD 267
>Q56304:DHE3_THELI Glutamate dehydrogenase - Thermococcus litoralis|
Length = 419
Score = 93.6 bits (231), Expect = 4e-18
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Frame = +2
Query: 959 LVKNSQYVQILERLLE----PERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLR 1126
L + +QY+ I E LE P+R +P D G V V GFRVQ++ A GP +GG+R
Sbjct: 14 LERAAQYMDISEEALEFLKRPQRIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIR 73
Query: 1127 FHPSMNLSVAKFLAFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYR 1306
+HP LS K LA T K A+ GG GG +PK S+ E R + ++ +Y
Sbjct: 74 WHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGVICNPKEMSDREKERLARGYVRAIYD 133
Query: 1307 YLGPDQDFPAEDVGVGPREMGFLFGQYRRLS 1399
+ P D PA DV P+ M ++ +Y +S
Sbjct: 134 VISPYTDIPAPDVYTNPQIMAWMMDEYETIS 164
>Q9YC65:DHE3_AERPE Glutamate dehydrogenase - Aeropyrum pernix|
Length = 418
Score = 89.4 bits (220), Expect = 7e-17
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +2
Query: 986 ILERLLEPERCFIFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFL 1165
+ E L P+R RV D G V G+R Q + ALGP +GG+R+HP++ ++ L
Sbjct: 27 VYEVLANPDRVLQVRVTIKMDDGTVKTFLGWRSQHNSALGPYKGGVRYHPNVTMNEVIAL 86
Query: 1166 AFEQTLKNALSLYKLGGAAGGSDFDPKGKSEVEVMRFCQSFMDELYRYLGPDQDFPAEDV 1345
+ T KN+L+ GG GG +PK S E+ + + + + +G DQD PA DV
Sbjct: 87 SMWMTWKNSLAGLPYGGGKGGVRVNPKILSPRELELLSRKYFESISDIVGVDQDIPAPDV 146
Query: 1346 GVGPREMGFLFGQYRRLS-GHFQGNFTGPKIFWSGVLVLEQKLLDTGW 1486
P+ M + +Y R+ G F G TG + G L +++ TG+
Sbjct: 147 YTDPQVMSWFLDEYNRVKRGQFFGVVTGKPVELGG---LNARIVSTGY 191
Score = 45.8 bits (107), Expect = 9e-04
Identities = 41/157 (26%), Positives = 64/157 (40%)
Frame = +1
Query: 1447 GSSFRTEATGYGLVFFARVVLADMNKELKGLRCAISGSGKIAMHVLEKLLSCEAIPVTVS 1626
G + R +TGYG+ RV L+G A+ G G + + + L A V VS
Sbjct: 181 GLNARIVSTGYGVAVSTRVAAEKFLGGLEGRTVAVQGYGNVGYYAAKFLAEMGAKIVAVS 240
Query: 1627 DSEGYLFDGDGFDYVKYTLIRNIKAQQRSLKEYLKTFPRAKYINDAKPWGEQCDIAFPCA 1806
DS G ++D +G D + ++ + + R K I+ + DI P A
Sbjct: 241 DSRGGIYDPEGIDPEEALKVKRSTGT-------VANYQRGKKISTMEILELPVDILVPAA 293
Query: 1807 SQNEIDQGEALSIISSGCRVLVECSNMPCTGQAVDIL 1917
+ I A I +++ E +N P T A IL
Sbjct: 294 IEEVITDENADRI---KAKIISEGANGPTTTAAEKIL 327
>P23212:MSRA_STAEP Erythromycin resistance ATP-binding protein msrA - Staphylococcus|
epidermidis
Length = 488
Score = 32.7 bits (73), Expect = 7.6
Identities = 40/192 (20%), Positives = 75/192 (39%)
Frame = +2
Query: 662 KEYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQSASKEKVQLQTPEIERPVY 841
++Y + +R ++ RN + + A SASKEK T E
Sbjct: 204 EQYISEKQRLSQASKAKRNQAQQMAQASSKQKNKSIAPDRLSASKEK---GTVEKAAQKQ 260
Query: 842 VKALSKTAASILESLFKKDPHEAEFIQSIQEVVHSIEPVLVKNSQYVQILERLLEPERCF 1021
K + K + E + HE F Q+ +H+ P++ +N V+ ++LL R
Sbjct: 261 AKHIEKRMEHLEEVEKPQSYHEFNFPQNKIYDIHNNYPIIAQNLTLVKGSQKLLTQVR-- 318
Query: 1022 IFRVPWVDDRGEVHVNRGFRVQFSQALGPCRGGLRFHPSMNLSVAKFLAFEQTLKNALSL 1201
F++P+ + V N + +A+ G+ P + ++ + LA+E +L
Sbjct: 319 -FQIPYGKNIALVGANGVGKTTLLEAIYHQIEGIDCSPKVQMAYYRQLAYEDMRDVSLLQ 377
Query: 1202 YKLGGAAGGSDF 1237
Y + F
Sbjct: 378 YLMDETDSSESF 389
Database: uniprot_sprot.fasta.out
Posted date: Jul 19, 2007 5:58 PM
Number of letters in database: 100,686,439
Number of sequences in database: 274,295
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 433,523,210
Number of extensions: 9616160
Number of successful extensions: 26447
Number of sequences better than 10.0: 83
Number of HSP's gapped: 26324
Number of HSP's successfully gapped: 160
Length of query: 844
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 722
Effective length of database: 67,222,449
Effective search space: 48534608178
Effective search space used: 48534608178
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)