No.
Definition
Score (bits)
E Value
1 ref|NM_001074926.1| Oryza sativa (japonica cultivar-group) Os11g...
595
e-166
2 dbj|AK066354.1| Oryza sativa (japonica cultivar-group) cDNA clon...
595
e-166
3 dbj|AK061105.1| Oryza sativa (japonica cultivar-group) cDNA clon...
595
e-166
4 gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome...
234
7e-58
5 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
234
7e-58
6 ref|NM_116156.3| Arabidopsis thaliana APG3 (ALBINO AND PALE GREE...
145
5e-31
7 gb|AY125535.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, co...
145
5e-31
8 gb|AY090253.1| Arabidopsis thaliana AT3g62910/T20O10_10 mRNA, co...
145
5e-31
9 dbj|AB109893.1| Arabidopsis thaliana APG3 mRNA for Chloroplast R...
145
5e-31
10 emb|BX822806.1|CNS0A75S Arabidopsis thaliana Full-length cDNA Co...
137
1e-28
11 emb|BX823596.1|CNS0A6JA Arabidopsis thaliana Full-length cDNA Co...
127
1e-25
12 gb|DQ366745.1| Uncultured Prochlorococcus marinus clone HOT0M-9F...
66
4e-07
13 emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; se...
66
4e-07
14 emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, B...
64
1e-06
15 gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome
56
4e-04
16 gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...
56
4e-04
17 gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytoge...
56
4e-04
18 gb|AC189644.1| Brassica rapa subsp. pekinensis clone KBrS008K03,...
54
0.001
19 gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
52
0.006
20 gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
52
0.006
21 gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
52
0.006
22 gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
52
0.006
23 gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
52
0.006
24 gb|AE010036.1| Streptococcus pyogenes strain MGAS8232, section 8...
52
0.006
25 ref|XM_306851.2| Anopheles gambiae str. PEST ENSANGP00000013776 ...
50
0.022
26 gb|AE006091.1| Pasteurella multocida subsp. multocida str. Pm70 ...
48
0.087
27 dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...
48
0.087
28 emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp...
48
0.087
29 emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in l...
48
0.087
30 gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
48
0.087
31 gb|CP000436.1| Haemophilus somnus 129PT, complete genome
46
0.34
32 gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
46
0.34
33 gb|AC189861.1| Gallus gallus chromosome Z clone CH261-177L11, co...
44
1.4
34 gb|CP000114.1| Streptococcus agalactiae A909, complete genome
44
1.4
35 gb|CP000133.1| Rhizobium etli CFN 42, complete genome
44
1.4
36 gb|AE014241.1| Streptococcus agalactiae 2603V/R section 51 of 10...
44
1.4
37 emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complet...
44
1.4
38 gb|AF343879.1|AF343879 Streptococcus agalactiae peptide chain re...
44
1.4
39 dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...
44
1.4
40 emb|CT737184.6| Zebrafish DNA sequence from clone DKEY-263M6 in ...
42
5.4
41 gb|AC172369.4| Gallus gallus BAC clone CH261-43N5 from chromosom...
42
5.4
42 ref|NM_001066459.1| Oryza sativa (japonica cultivar-group) Os07g...
42
5.4
43 gb|DQ366741.1| Uncultured Prochlorococcus marinus clone HOT0M-8C...
42
5.4
44 gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...
42
5.4
45 gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complet...
42
5.4
46 gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence
42
5.4
47 gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Can...
42
5.4
48 gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromoso...
42
5.4
49 gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromoso...
42
5.4
50 gb|AC067750.5| Homo sapiens chromosome 10 clone RP11-359E3, comp...
42
5.4
51 emb|CR936412.13| Zebrafish DNA sequence from clone DKEY-181M21 i...
42
5.4
52 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.4
53 emb|AL512330.13| Human DNA sequence from clone RP11-334N17 on ch...
42
5.4
54 emb|AL391985.11| Human DNA sequence from clone RP11-141D8 on chr...
42
5.4
55 emb|AL390865.10| Human DNA sequence from clone RP11-161L14 on ch...
42
5.4
56 dbj|AB213024.1| Desulfovibrio vulgaris rrm-1, rpL31, hyp001, prf...
42
5.4
57 gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ...
42
5.4
58 gb|AC140472.3| Mus musculus BAC clone RP24-403L12 from chromosom...
42
5.4
59 emb|BX322623.7| Zebrafish DNA sequence from clone CH211-256I14 i...
42
5.4
60 dbj|AK065606.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.4
61 dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D...
42
5.4
62 emb|BX469898.9| Zebrafish DNA sequence from clone DKEY-180H12 in...
42
5.4
63 emb|BX294386.5| Zebrafish DNA sequence from clone CH211-207B9 in...
42
5.4
64 emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in ...
42
5.4
65 gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
42
5.4
66 emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chr...
42
5.4
67 gb|AC004476.1|AC004476 Homo sapiens chromosome 19, cosmid R29388...
42
5.4
68 emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chro...
42
5.4
>ref|NM_001074926.1 | Oryza sativa (japonica cultivar-group) Os11g0657100 (Os11g0657100)
mRNA, complete cds
Length = 1647
Score = 595 bits (300), Expect = e-166
Identities = 486/548 (88%)
Strand = Plus / Plus
Query: 459 agtaagagctggcactggaggtgatgaagctggaatttgggctggtgaccttgtacgcat 518
||||||||| || |||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 538 agtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgtgcgtat 597
Query: 519 gtatcaaagatattgtgagctcaacaattggaagtttaaaccagtttcttgctcagaagc 578
|||||||| ||| ||||||| |||| |||||||| ||||||||||| ||||||||||
Sbjct: 598 gtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaagc 657
Query: 579 agaaaagggcggattcaagacatatgtgatggaggtgaagggaaagcaagtctacagtaa 638
||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 658 agaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagtaa 717
Query: 639 actgaagtttgagtcaggtgtgcaccgtgttcagcgtgtaccgcagacagagactatggg 698
||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 718 actgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatggg 777
Query: 699 tcgtgttcacacgtcaaccgcaactgtggctattatgccagaggccgacgaagtggacgt 758
||||||||||| ||||| |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 778 ccgtgttcacacatcaacagcaactgtagctattatgccagaggctgatgaagttgatgt 837
Query: 759 ggttattgatccaaaagatattgaacttaaagctgcaagatctggtggagctggagggca 818
|||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 838 ggttatcgatccgaaagatattgaactcaaaactgcaagatctggtggagctggagggca 897
Query: 819 gaatgttaacaaggtggagacagctattgatcttattcacaagcctacgggaataagaat 878
|||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 898 gaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaattcggat 957
Query: 879 attctgcacagaagaaaggtcgcaacttcaaaacaaagaacgtgcattccagttattgag 938
|||||| |||||||||||||| ||||| ||||| | |||||| |||||||| || |||||
Sbjct: 958 attctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaattgttgag 1017
Query: 939 agcaaaactatatgagataaagttaagggagcaacaagagtccataagaacccagaggtt 998
|||||| || || |||||||| ||| ||||||| || || || ||||||| |||||||
Sbjct: 1018 agcaaagctttacgagataaaattacgggagcagcaggaatctataagaaaccagaggaa 1077
Query: 999 actgcagg 1006
||||||||
Sbjct: 1078 actgcagg 1085
Score = 149 bits (75), Expect = 3e-32
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 316 tttaaggaatgtgagaggcagattgaagaaacaaaagctttgcaaaaagagaatggagat 375
|||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 347 tttaaggactgtgagaagcaaattgaagaaacaaaagttttgcaaaaagagaatgaagat 406
Query: 376 gaccctgatatggctgagatgatagcttcagagctggagtctctctctgatcagcttgca 435
||||| |||||||| |||||||| | ||||||| |||||||||| ||| | ||||||| |
Sbjct: 407 gacccagatatggcagagatgattgattcagagatggagtctctatctaaccagcttgaa 466
Query: 436 gagctcgaggaaagactga 454
||||| ||||||| |||||
Sbjct: 467 gagcttgaggaaaaactga 485
Score = 133 bits (67), Expect = 2e-27
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 142 gtggtctgcatggcggagccacatctcatatcaaagttggattctacagagaaggcatgg 201
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||
Sbjct: 173 gtggtctgcatggcggagccctatctcatagcaaagttggattctgcagagaaggcttgg 232
Query: 202 aaagaaatgtcgattagattgggtgaccctgacattgtctcagatccgggcgaataccaa 261
|| ||||||||| ||||||||| ||| ||||| || || || ||||| |||| ||||||
Sbjct: 233 aaggaaatgtcggttagattggctgatcctgatatagtttcggatcccagcgagtaccaa 292
Query: 262 aaacttgcaca 272
|||||||||||
Sbjct: 293 aaacttgcaca 303
Score = 60.0 bits (30), Expect = 2e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 atggaggccttcctcaccggcttccgggcgccgc 52
||||||||||||||| ||||||||||||||||||
Sbjct: 38 atggaggccttcctcgccggcttccgggcgccgc 71
Score = 52.0 bits (26), Expect = 0.006
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1092 tggagcagaaggaactcttggaggaaatggccac 1125
||||||||||||||||| ||||||| ||||||||
Sbjct: 1230 tggagcagaaggaactcctggaggagatggccac 1263
>dbj|AK066354.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013065L12, full
insert sequence
Length = 1608
Score = 595 bits (300), Expect = e-166
Identities = 486/548 (88%)
Strand = Plus / Plus
Query: 459 agtaagagctggcactggaggtgatgaagctggaatttgggctggtgaccttgtacgcat 518
||||||||| || |||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 543 agtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgtgcgtat 602
Query: 519 gtatcaaagatattgtgagctcaacaattggaagtttaaaccagtttcttgctcagaagc 578
|||||||| ||| ||||||| |||| |||||||| ||||||||||| ||||||||||
Sbjct: 603 gtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaagc 662
Query: 579 agaaaagggcggattcaagacatatgtgatggaggtgaagggaaagcaagtctacagtaa 638
||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 663 agaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagtaa 722
Query: 639 actgaagtttgagtcaggtgtgcaccgtgttcagcgtgtaccgcagacagagactatggg 698
||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 723 actgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatggg 782
Query: 699 tcgtgttcacacgtcaaccgcaactgtggctattatgccagaggccgacgaagtggacgt 758
||||||||||| ||||| |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 783 ccgtgttcacacatcaacagcaactgtagctattatgccagaggctgatgaagttgatgt 842
Query: 759 ggttattgatccaaaagatattgaacttaaagctgcaagatctggtggagctggagggca 818
|||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 843 ggttatcgatccgaaagatattgaactcaaaactgcaagatctggtggagctggagggca 902
Query: 819 gaatgttaacaaggtggagacagctattgatcttattcacaagcctacgggaataagaat 878
|||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 903 gaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaattcggat 962
Query: 879 attctgcacagaagaaaggtcgcaacttcaaaacaaagaacgtgcattccagttattgag 938
|||||| |||||||||||||| ||||| ||||| | |||||| |||||||| || |||||
Sbjct: 963 attctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaattgttgag 1022
Query: 939 agcaaaactatatgagataaagttaagggagcaacaagagtccataagaacccagaggtt 998
|||||| || || |||||||| ||| ||||||| || || || ||||||| |||||||
Sbjct: 1023 agcaaagctttacgagataaaattacgggagcagcaggaatctataagaaaccagaggaa 1082
Query: 999 actgcagg 1006
||||||||
Sbjct: 1083 actgcagg 1090
Score = 149 bits (75), Expect = 3e-32
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 316 tttaaggaatgtgagaggcagattgaagaaacaaaagctttgcaaaaagagaatggagat 375
|||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 352 tttaaggactgtgagaagcaaattgaagaaacaaaagttttgcaaaaagagaatgaagat 411
Query: 376 gaccctgatatggctgagatgatagcttcagagctggagtctctctctgatcagcttgca 435
||||| |||||||| |||||||| | ||||||| |||||||||| ||| | ||||||| |
Sbjct: 412 gacccagatatggcagagatgattgattcagagatggagtctctatctaaccagcttgaa 471
Query: 436 gagctcgaggaaagactga 454
||||| ||||||| |||||
Sbjct: 472 gagcttgaggaaaaactga 490
Score = 133 bits (67), Expect = 2e-27
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 142 gtggtctgcatggcggagccacatctcatatcaaagttggattctacagagaaggcatgg 201
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||
Sbjct: 178 gtggtctgcatggcggagccctatctcatagcaaagttggattctgcagagaaggcttgg 237
Query: 202 aaagaaatgtcgattagattgggtgaccctgacattgtctcagatccgggcgaataccaa 261
|| ||||||||| ||||||||| ||| ||||| || || || ||||| |||| ||||||
Sbjct: 238 aaggaaatgtcggttagattggctgatcctgatatagtttcggatcccagcgagtaccaa 297
Query: 262 aaacttgcaca 272
|||||||||||
Sbjct: 298 aaacttgcaca 308
Score = 60.0 bits (30), Expect = 2e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 atggaggccttcctcaccggcttccgggcgccgc 52
||||||||||||||| ||||||||||||||||||
Sbjct: 43 atggaggccttcctcgccggcttccgggcgccgc 76
Score = 52.0 bits (26), Expect = 0.006
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1092 tggagcagaaggaactcttggaggaaatggccac 1125
||||||||||||||||| ||||||| ||||||||
Sbjct: 1235 tggagcagaaggaactcctggaggagatggccac 1268
>dbj|AK061105.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B09, full
insert sequence
Length = 1647
Score = 595 bits (300), Expect = e-166
Identities = 486/548 (88%)
Strand = Plus / Plus
Query: 459 agtaagagctggcactggaggtgatgaagctggaatttgggctggtgaccttgtacgcat 518
||||||||| || |||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 538 agtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgtgcgtat 597
Query: 519 gtatcaaagatattgtgagctcaacaattggaagtttaaaccagtttcttgctcagaagc 578
|||||||| ||| ||||||| |||| |||||||| ||||||||||| ||||||||||
Sbjct: 598 gtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaagc 657
Query: 579 agaaaagggcggattcaagacatatgtgatggaggtgaagggaaagcaagtctacagtaa 638
||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 658 agaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagtaa 717
Query: 639 actgaagtttgagtcaggtgtgcaccgtgttcagcgtgtaccgcagacagagactatggg 698
||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 718 actgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatggg 777
Query: 699 tcgtgttcacacgtcaaccgcaactgtggctattatgccagaggccgacgaagtggacgt 758
||||||||||| ||||| |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 778 ccgtgttcacacatcaacagcaactgtagctattatgccagaggctgatgaagttgatgt 837
Query: 759 ggttattgatccaaaagatattgaacttaaagctgcaagatctggtggagctggagggca 818
|||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 838 ggttatcgatccgaaagatattgaactcaaaactgcaagatctggtggagctggagggca 897
Query: 819 gaatgttaacaaggtggagacagctattgatcttattcacaagcctacgggaataagaat 878
|||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 898 gaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaattcggat 957
Query: 879 attctgcacagaagaaaggtcgcaacttcaaaacaaagaacgtgcattccagttattgag 938
|||||| |||||||||||||| ||||| ||||| | |||||| |||||||| || |||||
Sbjct: 958 attctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaattgttgag 1017
Query: 939 agcaaaactatatgagataaagttaagggagcaacaagagtccataagaacccagaggtt 998
|||||| || || |||||||| ||| ||||||| || || || ||||||| |||||||
Sbjct: 1018 agcaaagctttacgagataaaattacgggagcagcaggaatctataagaaaccagaggaa 1077
Query: 999 actgcagg 1006
||||||||
Sbjct: 1078 actgcagg 1085
Score = 149 bits (75), Expect = 3e-32
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 316 tttaaggaatgtgagaggcagattgaagaaacaaaagctttgcaaaaagagaatggagat 375
|||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 347 tttaaggactgtgagaagcaaattgaagaaacaaaagttttgcaaaaagagaatgaagat 406
Query: 376 gaccctgatatggctgagatgatagcttcagagctggagtctctctctgatcagcttgca 435
||||| |||||||| |||||||| | ||||||| |||||||||| ||| | ||||||| |
Sbjct: 407 gacccagatatggcagagatgattgattcagagatggagtctctatctaaccagcttgaa 466
Query: 436 gagctcgaggaaagactga 454
||||| ||||||| |||||
Sbjct: 467 gagcttgaggaaaaactga 485
Score = 133 bits (67), Expect = 2e-27
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 142 gtggtctgcatggcggagccacatctcatatcaaagttggattctacagagaaggcatgg 201
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||
Sbjct: 173 gtggtctgcatggcggagccctatctcatagcaaagttggattctgcagagaaggcttgg 232
Query: 202 aaagaaatgtcgattagattgggtgaccctgacattgtctcagatccgggcgaataccaa 261
|| ||||||||| ||||||||| ||| ||||| || || || ||||| |||| ||||||
Sbjct: 233 aaggaaatgtcggttagattggctgatcctgatatagtttcggatcccagcgagtaccaa 292
Query: 262 aaacttgcaca 272
|||||||||||
Sbjct: 293 aaacttgcaca 303
Score = 60.0 bits (30), Expect = 2e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 atggaggccttcctcaccggcttccgggcgccgc 52
||||||||||||||| ||||||||||||||||||
Sbjct: 38 atggaggccttcctcgccggcttccgggcgccgc 71
Score = 52.0 bits (26), Expect = 0.006
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1092 tggagcagaaggaactcttggaggaaatggccac 1125
||||||||||||||||| ||||||| ||||||||
Sbjct: 1230 tggagcagaaggaactcctggaggagatggccac 1263
>gb|AC120888.2 | Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
P0485F09, complete sequence
Length = 161276
Score = 234 bits (118), Expect = 7e-58
Identities = 154/166 (92%)
Strand = Plus / Plus
Query: 577 gcagaaaagggcggattcaagacatatgtgatggaggtgaagggaaagcaagtctacagt 636
||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 47170 gcagaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagt 47229
Query: 637 aaactgaagtttgagtcaggtgtgcaccgtgttcagcgtgtaccgcagacagagactatg 696
||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||
Sbjct: 47230 aaactgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatg 47289
Query: 697 ggtcgtgttcacacgtcaaccgcaactgtggctattatgccagagg 742
|| ||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 47290 ggccgtgttcacacatcaacagcaactgtagctattatgccagagg 47335
Score = 143 bits (72), Expect = 2e-30
Identities = 117/132 (88%)
Strand = Plus / Plus
Query: 813 agggcagaatgttaacaaggtggagacagctattgatcttattcacaagcctacgggaat 872
|||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||
Sbjct: 47603 agggcagaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaat 47662
Query: 873 aagaatattctgcacagaagaaaggtcgcaacttcaaaacaaagaacgtgcattccagtt 932
| |||||||| |||||||||||||| ||||| ||||| | |||||| |||||||| ||
Sbjct: 47663 tcggatattctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaatt 47722
Query: 933 attgagagcaaa 944
|||||||||||
Sbjct: 47723 gttgagagcaaa 47734
Score = 105 bits (53), Expect = 4e-19
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 354 tttgcaaaaagagaatggagatgaccctgatatggctgagatgatagcttcagagctgga 413
||||||||||||||||| ||||||||| |||||||| |||||||| | ||||||| ||||
Sbjct: 45780 tttgcaaaaagagaatgaagatgacccagatatggcagagatgattgattcagagatgga 45839
Query: 414 gtctctctctgatcagcttgcagagctcgaggaaagactga 454
|||||| ||| | ||||||| |||||| ||||||| |||||
Sbjct: 45840 gtctctatctaaccagcttgaagagcttgaggaaaaactga 45880
Score = 87.7 bits (44), Expect = 1e-13
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 748 gaagtggacgtggttattgatccaaaagatattgaacttaaagctgcaagatctggtgga 807
||||| || |||||||| ||||| |||||||||||||| ||| |||||||||||||||||
Sbjct: 47428 gaagttgatgtggttatcgatccgaaagatattgaactcaaaactgcaagatctggtgga 47487
Query: 808 gctggagg 815
||||||||
Sbjct: 47488 gctggagg 47495
Score = 77.8 bits (39), Expect = 1e-10
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 459 agtaagagctggcactggaggtgatgaagctggaatttgggctggtgaccttgta 513
||||||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 46121 agtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgta 46175
Score = 67.9 bits (34), Expect = 9e-08
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 164 atctcatatcaaagttggattctacagagaaggcatggaaagaaatgtcg 213
|||||||| |||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 45078 atctcatagcaaagttggattctgcagagaaggcttggaaggaaatgtcg 45127
Score = 60.0 bits (30), Expect = 2e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 atggaggccttcctcaccggcttccgggcgccgc 52
||||||||||||||| ||||||||||||||||||
Sbjct: 44788 atggaggccttcctcgccggcttccgggcgccgc 44821
Score = 52.0 bits (26), Expect = 0.006
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1092 tggagcagaaggaactcttggaggaaatggccac 1125
||||||||||||||||| ||||||| ||||||||
Sbjct: 48707 tggagcagaaggaactcctggaggagatggccac 48740
Score = 50.1 bits (25), Expect = 0.022
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 316 tttaaggaatgtgagaggcagattgaagaaacaaaag 352
|||||||| ||||||| ||| ||||||||||||||||
Sbjct: 45632 tttaaggactgtgagaagcaaattgaagaaacaaaag 45668
Score = 50.1 bits (25), Expect = 0.022
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 517 atgtatcaaagatattgtgagctcaacaattggaagtttaaaccagtttcttgctcagaa 576
|||||||||| ||| ||||||| |||| |||||||| ||||||||||| ||||||||
Sbjct: 47031 atgtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaa 47090
Query: 577 g 577
|
Sbjct: 47091 g 47091
Score = 44.1 bits (22), Expect = 1.4
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 215 ttagattgggtgaccctgacattgtctcagatccgggcgaataccaaaaacttgcaca 272
||||||||| ||| ||||| || || || ||||| |||| |||||||||||||||||
Sbjct: 45414 ttagattggctgatcctgatatagtttcggatcccagcgagtaccaaaaacttgcaca 45471
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 234 bits (118), Expect = 7e-58
Identities = 154/166 (92%)
Strand = Plus / Plus
Query: 577 gcagaaaagggcggattcaagacatatgtgatggaggtgaagggaaagcaagtctacagt 636
||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 25440279 gcagaaaagggtgggttcaagacatatgtgatggaggtgaagggcaaacaagtctacagt 25440338
Query: 637 aaactgaagtttgagtcaggtgtgcaccgtgttcagcgtgtaccgcagacagagactatg 696
||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||
Sbjct: 25440339 aaactgaagtttgagtcaggtgtacaccgtgttcagcgcgttcctcagacagagactatg 25440398
Query: 697 ggtcgtgttcacacgtcaaccgcaactgtggctattatgccagagg 742
|| ||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 25440399 ggccgtgttcacacatcaacagcaactgtagctattatgccagagg 25440444
Score = 143 bits (72), Expect = 2e-30
Identities = 117/132 (88%)
Strand = Plus / Plus
Query: 813 agggcagaatgttaacaaggtggagacagctattgatcttattcacaagcctacgggaat 872
|||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||
Sbjct: 25440712 agggcagaatgttaacaaggtggaaactgctgttgatcttattcacaaacctacgggaat 25440771
Query: 873 aagaatattctgcacagaagaaaggtcgcaacttcaaaacaaagaacgtgcattccagtt 932
| |||||||| |||||||||||||| ||||| ||||| | |||||| |||||||| ||
Sbjct: 25440772 tcggatattctgtacagaagaaaggtcacaactccaaaatagagaacgcgcattccaatt 25440831
Query: 933 attgagagcaaa 944
|||||||||||
Sbjct: 25440832 gttgagagcaaa 25440843
Score = 105 bits (53), Expect = 4e-19
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 354 tttgcaaaaagagaatggagatgaccctgatatggctgagatgatagcttcagagctgga 413
||||||||||||||||| ||||||||| |||||||| |||||||| | ||||||| ||||
Sbjct: 25438889 tttgcaaaaagagaatgaagatgacccagatatggcagagatgattgattcagagatgga 25438948
Query: 414 gtctctctctgatcagcttgcagagctcgaggaaagactga 454
|||||| ||| | ||||||| |||||| ||||||| |||||
Sbjct: 25438949 gtctctatctaaccagcttgaagagcttgaggaaaaactga 25438989
Score = 87.7 bits (44), Expect = 1e-13
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 748 gaagtggacgtggttattgatccaaaagatattgaacttaaagctgcaagatctggtgga 807
||||| || |||||||| ||||| |||||||||||||| ||| |||||||||||||||||
Sbjct: 25440537 gaagttgatgtggttatcgatccgaaagatattgaactcaaaactgcaagatctggtgga 25440596
Query: 808 gctggagg 815
||||||||
Sbjct: 25440597 gctggagg 25440604
Score = 77.8 bits (39), Expect = 1e-10
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 459 agtaagagctggcactggaggtgatgaagctggaatttgggctggtgaccttgta 513
||||||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25439230 agtaagagcaggtgctggtggtgatgaagctggaatttgggctggtgaccttgta 25439284
Score = 67.9 bits (34), Expect = 9e-08
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 164 atctcatatcaaagttggattctacagagaaggcatggaaagaaatgtcg 213
|||||||| |||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 25438187 atctcatagcaaagttggattctgcagagaaggcttggaaggaaatgtcg 25438236
Score = 60.0 bits (30), Expect = 2e-05
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 atggaggccttcctcaccggcttccgggcgccgc 52
||||||||||||||| ||||||||||||||||||
Sbjct: 25437897 atggaggccttcctcgccggcttccgggcgccgc 25437930
Score = 52.0 bits (26), Expect = 0.006
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1092 tggagcagaaggaactcttggaggaaatggccac 1125
||||||||||||||||| ||||||| ||||||||
Sbjct: 25441816 tggagcagaaggaactcctggaggagatggccac 25441849
Score = 50.1 bits (25), Expect = 0.022
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 316 tttaaggaatgtgagaggcagattgaagaaacaaaag 352
|||||||| ||||||| ||| ||||||||||||||||
Sbjct: 25438741 tttaaggactgtgagaagcaaattgaagaaacaaaag 25438777
Score = 50.1 bits (25), Expect = 0.022
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 517 atgtatcaaagatattgtgagctcaacaattggaagtttaaaccagtttcttgctcagaa 576
|||||||||| ||| ||||||| |||| |||||||| ||||||||||| ||||||||
Sbjct: 25440140 atgtatcaaaaatactgtgagcgcaactcctggaagttcaaaccagtttccagctcagaa 25440199
Query: 577 g 577
|
Sbjct: 25440200 g 25440200
Score = 44.1 bits (22), Expect = 1.4
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 215 ttagattgggtgaccctgacattgtctcagatccgggcgaataccaaaaacttgcaca 272
||||||||| ||| ||||| || || || ||||| |||| |||||||||||||||||
Sbjct: 25438523 ttagattggctgatcctgatatagtttcggatcccagcgagtaccaaaaacttgcaca 25438580
>dbj|AB213024.1 | Desulfovibrio vulgaris rrm-1, rpL31, hyp001, prfA, hemk genes for
rRNA methylase, ribosomal protein L31, hypothetical
protein, peptide release factor 1, HemK protein, complete
cds
Length = 5528
Score = 42.1 bits (21), Expect = 5.4
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 724 gtggctattatgccagaggccgacgaagtggacgtgg 760
||||| ||| |||| |||||||| |||||||||||||
Sbjct: 3507 gtggccattttgccggaggccgaggaagtggacgtgg 3543
>emb|AL928811.8 | Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete
sequence
Length = 222061
Score = 42.1 bits (21), Expect = 5.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1253 ctcatgaatcatattccttgc 1273
|||||||||||||||||||||
Sbjct: 214560 ctcatgaatcatattccttgc 214580
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 285,630,708
Number of extensions: 15852920
Number of successful extensions: 317939
Number of sequences better than 10.0: 68
Number of HSP's gapped: 317938
Number of HSP's successfully gapped: 113
Length of query: 1414
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1391
Effective length of database: 18,503,978,556
Effective search space: 25739034171396
Effective search space used: 25739034171396
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)