ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56d22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK103137:Os05g0159100 348 2e-96
2AK121761:Os01g0331900 308 5e-84
3AK064784:Os01g0331900 308 5e-84
4AK060262: 133 2e-31
5Os05g0263200:Os05g0263200 31 1.1
6Os01g0930600:Os01g0930600 31 1.1
7AK105532:Os11g0163800 30 2.5
8AK110287: 29 4.2
9AK106352:Os12g0262000 28 7.2
10Os04g0645900:Os04g0645900 28 7.3
11AK103031:Os03g0754200 28 9.4
12AK068699:Os03g0100800 28 9.5 
>AK103137:Os05g0159100 |
          Length = 187
 Score =  348 bits (894), Expect = 2e-96
 Identities = 168/186 (90%), Positives = 177/186 (95%)
 Frame = +1

Query: 103 MDRPQVVSENYANPITCLFHVLFKASALAFYILFSLFVKSFVIIFVITVLLAALDFWVVK 282
           MDRPQVV+ENYANP+TCLFHVLFKA AL FYILFSLFVKSFVIIFVITV LAALDFWVVK
Sbjct: 1   MDRPQVVTENYANPVTCLFHVLFKAGALVFYILFSLFVKSFVIIFVITVFLAALDFWVVK 60

Query: 283 NVSGRILVGLRWWNEIDDDGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILA 462
           NVSGRILVG+RWWNEIDD+GNSVWKFECLDGE+LARMNKKDSWLFWWTLYL AAAWIIL 
Sbjct: 61  NVSGRILVGMRWWNEIDDEGNSVWKFECLDGEALARMNKKDSWLFWWTLYLTAAAWIILG 120

Query: 463 IFSLIRLEADYLLVVGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSRITSSL 642
           IFSLIRLEADYLLVVGVCLTLSLANIVGFT+CNKDAKKNIR + E  AQNAITSRITS+L
Sbjct: 121 IFSLIRLEADYLLVVGVCLTLSLANIVGFTRCNKDAKKNIRGYFEGHAQNAITSRITSTL 180

Query: 643 QSAFGI 660
           QSAFG+
Sbjct: 181 QSAFGV 186
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>AK121761:Os01g0331900 |
          Length = 183

 Score =  308 bits (788), Expect = 5e-84
 Identities = 150/186 (80%), Positives = 165/186 (88%)
 Frame = +1

Query: 103 MDRPQVVSENYANPITCLFHVLFKASALAFYILFSLFVKSFVIIFVITVLLAALDFWVVK 282
           MD+ QVV ENYANP TC FHVLFKA ALAFYIL +LFV +FVIIFVITVLLAALDFWVVK
Sbjct: 1   MDQHQVVGENYANPKTCFFHVLFKAGALAFYILSALFVTNFVIIFVITVLLAALDFWVVK 60

Query: 283 NVSGRILVGLRWWNEIDDDGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILA 462
           NVSGRILVGLRWWNEIDD+GNSVWKFECLDGESLARMNKKDSWLFWWTLYL AAAWI+L 
Sbjct: 61  NVSGRILVGLRWWNEIDDEGNSVWKFECLDGESLARMNKKDSWLFWWTLYLTAAAWIVLG 120

Query: 463 IFSLIRLEADYLLVVGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSRITSSL 642
           IFSLIRL ADYLLVVGVCL+LS+ANIVGFTKCNKDAKKN+   A+      ++S + S++
Sbjct: 121 IFSLIRLHADYLLVVGVCLSLSIANIVGFTKCNKDAKKNV---ADWTRTTLLSSGVRSTI 177

Query: 643 QSAFGI 660
           QSAFG+
Sbjct: 178 QSAFGV 183
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>AK064784:Os01g0331900 |
          Length = 183

 Score =  308 bits (788), Expect = 5e-84
 Identities = 150/186 (80%), Positives = 165/186 (88%)
 Frame = +1

Query: 103 MDRPQVVSENYANPITCLFHVLFKASALAFYILFSLFVKSFVIIFVITVLLAALDFWVVK 282
           MD+ QVV ENYANP TC FHVLFKA ALAFYIL +LFV +FVIIFVITVLLAALDFWVVK
Sbjct: 1   MDQHQVVGENYANPKTCFFHVLFKAGALAFYILSALFVTNFVIIFVITVLLAALDFWVVK 60

Query: 283 NVSGRILVGLRWWNEIDDDGNSVWKFECLDGESLARMNKKDSWLFWWTLYLNAAAWIILA 462
           NVSGRILVGLRWWNEIDD+GNSVWKFECLDGESLARMNKKDSWLFWWTLYL AAAWI+L 
Sbjct: 61  NVSGRILVGLRWWNEIDDEGNSVWKFECLDGESLARMNKKDSWLFWWTLYLTAAAWIVLG 120

Query: 463 IFSLIRLEADYLLVVGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAAQNAITSRITSSL 642
           IFSLIRL ADYLLVVGVCL+LS+ANIVGFTKCNKDAKKN+   A+      ++S + S++
Sbjct: 121 IFSLIRLHADYLLVVGVCLSLSIANIVGFTKCNKDAKKNV---ADWTRTTLLSSGVRSTI 177

Query: 643 QSAFGI 660
           QSAFG+
Sbjct: 178 QSAFGV 183
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>AK060262: |
          Length = 78

 Score =  133 bits (334), Expect = 2e-31
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = +1

Query: 430 YLNAAAWIILAIFSLIRLEADYLLVVGVCLTLSLANIVGFTKCNKDAKKNIRAFAENAAQ 609
           YL AAAWIIL IFSLIRLEADYLLVVGVCLTLSLANIVGFT+CNKDAKKNIR + E  AQ
Sbjct: 1   YLTAAAWIILGIFSLIRLEADYLLVVGVCLTLSLANIVGFTRCNKDAKKNIRGYFEGHAQ 60

Query: 610 NAITSRITSSLQSAFGI 660
           NAITSRITS+LQSAFG+
Sbjct: 61  NAITSRITSTLQSAFGV 77
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>Os05g0263200:Os05g0263200 |
          Length = 1820

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/53 (24%), Positives = 27/53 (50%)
 Frame = +2

Query: 578 TSELLLKMPLKTPSHPASHHPCSQHSASEVQITQRPKITYNCVTFCQRSACDI 736
           + E++ K+ LK   HP  +H    +++  ++I QR K+ +    +     CD+
Sbjct: 492 SKEMVEKLGLKLLKHPHPYHVQWLNNSGSIKIAQRVKVPFKIGEYIDTMECDV 544
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>Os01g0930600:Os01g0930600 |
          Length = 368

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 273 GGEECQRKDTGRASLVE*D*RRW*QCVEVRVPRRGVSRSDEQKRLMAVLVDSLLERC 443
           GG + QR++  RA+LV     R  Q +    PRRG  R   ++R +++++D L  RC
Sbjct: 103 GGAQ-QRREPRRAALVP----RCEQLIPHHEPRRGRRRGGRRRRGVSIVLDPLQRRC 154
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>AK105532:Os11g0163800 |
          Length = 419

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = -2

Query: 416 NSHESFLFIRARDSPSRHSNFHTLLPSSSISFHQRSPTSILPLTFFTTQKSSAAR 252
           +SH +  F RAR SPSR +   TL  SSS S    S +    L++  ++  SAAR
Sbjct: 195 SSHRNRSFGRARASPSRSA---TLASSSSSSSSSSSSSHFRSLSWSVSRNWSAAR 246
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>AK110287: |
          Length = 856

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
 Frame = +2

Query: 596 KMPLKTPSHPASHHPC------SQHSASEVQITQRPKIT 694
           K P   PSHPA+HHP        QH+         PK T
Sbjct: 184 KGPAPKPSHPAAHHPAPAPQATQQHAPVTTTAVVAPKTT 222
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>AK106352:Os12g0262000 |
          Length = 141

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/78 (30%), Positives = 34/78 (43%)
 Frame = +2

Query: 539 SWGSPNATKMPRRTSELLLKMPLKTPSHPASHHPCSQHSASEVQITQRPKITYNCVTFCQ 718
           S GS  + K  R  S  +LKM L   ++P  +HP    +AS V  + +P           
Sbjct: 48  SKGSAISVKPARTMSLRMLKMHLCRNTNPPVYHPRRGANASMVSASAKPS---------P 98

Query: 719 RSACDILFSCDFGLYTSR 772
           R    I FS  + + TSR
Sbjct: 99  RVTETIRFSMPYSMATSR 116
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>Os04g0645900:Os04g0645900 |
          Length = 520

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 558 AFGEPHDVCKA*SQANSNNKKVISFKSNE*KYRKNDPCSS-VQVKSPPE 415
           A  E HD C A SQ +SN    ++ K+ E      D CSS   +K+P +
Sbjct: 133 AHEEHHDHCHAQSQGSSNVAGTMTGKNQEQGNENPDGCSSYCDIKAPSD 181
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>AK103031:Os03g0754200 |
          Length = 79

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 609 KRHHIPHHIIPAVSIRHLKSRLHRG-PKLHTTVLPSVKDQLVISC 740
           +RH+ PH +    +++ L SR+H G  KL TT +    + L  SC
Sbjct: 1   RRHNFPHFVCWLCTLKKLASRVHGGLRKLLTTNVRIHMNHLCRSC 45
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>AK068699:Os03g0100800 |
          Length = 970

 Score = 28.1 bits (61), Expect = 9.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 208 LFVKSFVIIFVITVLLAALDFWVVKNVSGRILVGLRW 318
           L + +FVI  +I  +LAA+  W V ++ G   +G RW
Sbjct: 810 LLMAAFVIAQLIATVLAAIATWEVASIRG---IGWRW 843


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,708,738
Number of extensions: 530827
Number of successful extensions: 1613
Number of sequences better than 10.0: 12
Number of HSP's gapped: 1611
Number of HSP's successfully gapped: 12
Length of query: 318
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 217
Effective length of database: 11,355,714
Effective search space: 2464189938
Effective search space used: 2464189938
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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