| Clone Name | FLbaf56d22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT830850.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA006A21, full insert sequence Length = 929 Score = 589 bits (297), Expect = e-165 Identities = 492/557 (88%) Strand = Plus / Plus Query: 97 ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156 ||||| |||||||| |||||||| || | ||||||||||||||||||| | || |||||| Sbjct: 68 ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 127 Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216 || ||||||||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 128 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 187 Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276 ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||| Sbjct: 188 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 247 Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336 ||||||||||| || || |||||| |||||||| | || |||||||||||||| |||||| Sbjct: 248 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 307 Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396 || || ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||| Sbjct: 308 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 367 Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456 ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 368 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 427 Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516 |||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 428 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 487 Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576 ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct: 488 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 547 Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636 || ||||| | || |||| | |||||||| || |||||||||||||||||||| Sbjct: 548 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 607 Query: 637 tccctgcagtcagcatt 653 ||||||| |||||||| Sbjct: 608 accctgcaatcagcatt 624
>ref|NM_001061249.1| Oryza sativa (japonica cultivar-group) Os05g0159100 (Os05g0159100) mRNA, complete cds Length = 1083 Score = 589 bits (297), Expect = e-165 Identities = 492/557 (88%) Strand = Plus / Plus Query: 97 ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156 ||||| |||||||| |||||||| || | ||||||||||||||||||| | || |||||| Sbjct: 140 ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 199 Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216 || ||||||||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 200 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 259 Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276 ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||| Sbjct: 260 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 319 Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336 ||||||||||| || || |||||| |||||||| | || |||||||||||||| |||||| Sbjct: 320 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 379 Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396 || || ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||| Sbjct: 380 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 439 Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456 ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 440 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 499 Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516 |||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 500 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 559 Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576 ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct: 560 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 619 Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636 || ||||| | || |||| | |||||||| || |||||||||||||||||||| Sbjct: 620 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 679 Query: 637 tccctgcagtcagcatt 653 ||||||| |||||||| Sbjct: 680 accctgcaatcagcatt 696
>dbj|AK103137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120E14, full insert sequence Length = 1085 Score = 589 bits (297), Expect = e-165 Identities = 492/557 (88%) Strand = Plus / Plus Query: 97 ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156 ||||| |||||||| |||||||| || | ||||||||||||||||||| | || |||||| Sbjct: 142 ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 201 Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216 || ||||||||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 202 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 261 Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276 ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||| Sbjct: 262 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 321 Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336 ||||||||||| || || |||||| |||||||| | || |||||||||||||| |||||| Sbjct: 322 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 381 Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396 || || ||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||| Sbjct: 382 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 441 Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456 ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 442 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 501 Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516 |||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 502 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 561 Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576 ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct: 562 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 621 Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636 || ||||| | || |||| | |||||||| || |||||||||||||||||||| Sbjct: 622 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 681 Query: 637 tccctgcagtcagcatt 653 ||||||| |||||||| Sbjct: 682 accctgcaatcagcatt 698
>gb|AY105506.1| Zea mays PCO099200 mRNA sequence Length = 795 Score = 527 bits (266), Expect = e-146 Identities = 412/462 (89%) Strand = Plus / Plus Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173 ||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 148 ccaggtggttagcgagaattatgccaatcccataacatgcttcttccatgtgctattcaa 207 Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233 |||| |||||| || ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 208 ggcgggggcgctagccttctacatcctattctcgctctttgtgaagagcttcgtcatcat 267 Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293 ||| || ||||| |||||||| || |||||||||||||||||||||||||| ||||| || Sbjct: 268 cttcgtgatcacggtgctcctcgcagcgcttgacttctgggtggtgaagaacgtcagtgg 327 Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353 |||||||| |||||||| || |||||||||||||| || || || || ||||||||||| Sbjct: 328 caggatactagtcgggctgcggtggtggaatgagatcgatgatgacggaaacagtgtgtg 387 Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413 |||||| || ||||| || |||||||||||||||||||||||||| || || |||||||| Sbjct: 388 gaagtttgaatgccttgatggggagtctctcgctcggatgaacaanaaggattcatggct 447 Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473 ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||| Sbjct: 448 gttctggtggactctttacttgactgctgctgcatggatcgttcttggtatattttcact 507 Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533 ||| | ||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 508 catcangcttgaggctgattaccttcttgttgttggagtttgcttgantctaagcattgc 567 Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575 |||||| || || |||||| | |||||||||||||||||||| Sbjct: 568 aaacattgttggattcaccnagtgcaacaaagatgccaagaa 609
>ref|NM_001049465.1| Oryza sativa (japonica cultivar-group) Os01g0331900 (Os01g0331900) mRNA, complete cds Length = 1085 Score = 361 bits (182), Expect = 3e-96 Identities = 392/462 (84%) Strand = Plus / Plus Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173 |||||||||| ||||||| ||||| ||||| | ||||| |||||||||| |||||||| Sbjct: 157 ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 216 Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233 ||| ||| ||||||||||||| || | |||| ||||||| | ||| || || || Sbjct: 217 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 276 Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293 ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| || Sbjct: 277 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 336 Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353 |||||| |||| ||||| || |||||||||||||| || || || || || || ||||| Sbjct: 337 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 396 Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413 |||||| |||||||| || || |||||||| ||| |||||||||| || ||||||||||| Sbjct: 397 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 456 Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473 ||||||||||||||| ||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 457 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 516 Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533 ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | || Sbjct: 517 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 576 Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575 |||||| || || |||||||| |||||||||||||||||||| Sbjct: 577 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 618
>dbj|AK121761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090D14, full insert sequence Length = 1086 Score = 361 bits (182), Expect = 3e-96 Identities = 392/462 (84%) Strand = Plus / Plus Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173 |||||||||| ||||||| ||||| ||||| | ||||| |||||||||| |||||||| Sbjct: 158 ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 217 Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233 ||| ||| ||||||||||||| || | |||| ||||||| | ||| || || || Sbjct: 218 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 277 Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293 ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| || Sbjct: 278 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 337 Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353 |||||| |||| ||||| || |||||||||||||| || || || || || || ||||| Sbjct: 338 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 397 Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413 |||||| |||||||| || || |||||||| ||| |||||||||| || ||||||||||| Sbjct: 398 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 457 Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473 ||||||||||||||| ||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 458 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 517 Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533 ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | || Sbjct: 518 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 577 Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575 |||||| || || |||||||| |||||||||||||||||||| Sbjct: 578 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 619
>dbj|AK064784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B15, full insert sequence Length = 987 Score = 361 bits (182), Expect = 3e-96 Identities = 392/462 (84%) Strand = Plus / Plus Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173 |||||||||| ||||||| ||||| ||||| | ||||| |||||||||| |||||||| Sbjct: 66 ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 125 Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233 ||| ||| ||||||||||||| || | |||| ||||||| | ||| || || || Sbjct: 126 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 185 Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293 ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| || Sbjct: 186 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 245 Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353 |||||| |||| ||||| || |||||||||||||| || || || || || || ||||| Sbjct: 246 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 305 Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413 |||||| |||||||| || || |||||||| ||| |||||||||| || ||||||||||| Sbjct: 306 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 365 Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473 ||||||||||||||| ||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 366 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 425 Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533 ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | || Sbjct: 426 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 485 Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575 |||||| || || |||||||| |||||||||||||||||||| Sbjct: 486 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 527
>dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A04, full insert sequence Length = 876 Score = 242 bits (122), Expect = 2e-60 Identities = 200/226 (88%) Strand = Plus / Plus Query: 428 tttacttgaacgctgctgcatggatcattcttgcgatattttcactcattagacttgaag 487 ||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||| Sbjct: 1 tttacttgactgctgctgcatggatcattcttgggatattttcacttatcagacttgaag 60 Query: 488 ctgattaccttcttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggt 547 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 61 ctgactaccttcttgttgttggagtttgcttgactctaagccttgcaaacattgttgggt 120 Query: 548 tcaccaaatgcaacaaagatgccaagaagaacatccgagcttttgctgaaaatgccgctc 607 |||||| |||||||||||||||||||||||| ||||| | || |||| | |||| Sbjct: 121 tcaccagatgcaacaaagatgccaagaagaatatccggggttactttgaaggtcatgctc 180 Query: 608 aaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653 |||| || |||||||||||||||||||| ||||||| |||||||| Sbjct: 181 aaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 226
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 212 bits (107), Expect = 2e-51 Identities = 176/199 (88%) Strand = Plus / Plus Query: 180 ggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcatctttgt 239 |||||||| |||||||||| | || ||||||||||||||||||||||||||||| || || Sbjct: 58986 ggcgctggtgttctacatcttgttttcgctcttcgtgaagagcttcgtcatcatattcgt 59045 Query: 240 catcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcggaaggat 299 |||||||||| |||| || ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 59046 catcaccgtgttcctggcggcgctcgacttctgggtggtgaagaatgtgagtggcaggat 59105 Query: 300 actggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtggaagtt 359 | |||||||| | || |||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 59106 attggtcgggatgcggtggtggaatgagatcgacgacgagggcaacagcgtgtggaagtt 59165 Query: 360 cgagtgcctcgacggggag 378 ||||||||||| |||||| Sbjct: 59166 tgagtgcctcgatggggag 59184 Score = 196 bits (99), Expect = 1e-46 Identities = 120/127 (94%) Strand = Plus / Plus Query: 439 gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498 |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||| Sbjct: 60279 gctgctgcatggatcattcttgggatattttcacttatcagacttgaagctgactacctt 60338 Query: 499 cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558 ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||| Sbjct: 60339 cttgttgttggagtttgcttgactctaagccttgcaaacattgttgggttcaccagatgc 60398 Query: 559 aacaaag 565 ||||||| Sbjct: 60399 aacaaag 60405 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436 |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 59273 ctcttgctcggatgaacaaaaaggactcgtggctgttctggtggactctttacttga 59329 Score = 67.9 bits (34), Expect = 6e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 126 cgagaactatgccaatcctataacatgcctcttccatgtgctcttcaagg 175 ||||||||||||||||||| | || |||||||| |||||||||||||||| Sbjct: 58831 cgagaactatgccaatcctgtgacgtgcctctttcatgtgctcttcaagg 58880 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 604 gctcaaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653 |||||||| || |||||||||||||||||||| ||||||| |||||||| Sbjct: 60940 gctcaaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 60989
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 212 bits (107), Expect = 2e-51 Identities = 176/199 (88%) Strand = Plus / Plus Query: 180 ggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcatctttgt 239 |||||||| |||||||||| | || ||||||||||||||||||||||||||||| || || Sbjct: 3429504 ggcgctggtgttctacatcttgttttcgctcttcgtgaagagcttcgtcatcatattcgt 3429563 Query: 240 catcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcggaaggat 299 |||||||||| |||| || ||||| ||||||||||||||||||||||| || || ||||| Sbjct: 3429564 catcaccgtgttcctggcggcgctcgacttctgggtggtgaagaatgtgagtggcaggat 3429623 Query: 300 actggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtggaagtt 359 | |||||||| | || |||||||||||||| |||||||| || ||||| ||||||||||| Sbjct: 3429624 attggtcgggatgcggtggtggaatgagatcgacgacgagggcaacagcgtgtggaagtt 3429683 Query: 360 cgagtgcctcgacggggag 378 ||||||||||| |||||| Sbjct: 3429684 tgagtgcctcgatggggag 3429702 Score = 196 bits (99), Expect = 1e-46 Identities = 120/127 (94%) Strand = Plus / Plus Query: 439 gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498 |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||| Sbjct: 3430797 gctgctgcatggatcattcttgggatattttcacttatcagacttgaagctgactacctt 3430856 Query: 499 cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558 ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||| Sbjct: 3430857 cttgttgttggagtttgcttgactctaagccttgcaaacattgttgggttcaccagatgc 3430916 Query: 559 aacaaag 565 ||||||| Sbjct: 3430917 aacaaag 3430923 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 380 ctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436 |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 3429791 ctcttgctcggatgaacaaaaaggactcgtggctgttctggtggactctttacttga 3429847 Score = 67.9 bits (34), Expect = 6e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 126 cgagaactatgccaatcctataacatgcctcttccatgtgctcttcaagg 175 ||||||||||||||||||| | || |||||||| |||||||||||||||| Sbjct: 3429349 cgagaactatgccaatcctgtgacgtgcctctttcatgtgctcttcaagg 3429398 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 604 gctcaaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653 |||||||| || |||||||||||||||||||| ||||||| |||||||| Sbjct: 3431458 gctcaaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 3431507
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 133 bits (67), Expect = 1e-27 Identities = 112/127 (88%) Strand = Plus / Plus Query: 439 gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498 |||||||||||||| |||||| |||||| |||||||| |||||| | |||||||||||| Sbjct: 12835026 gctgctgcatggattgttcttgggatattctcactcatcagacttcatgctgattacctt 12835085 Query: 499 cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558 |||||||||||||||||||||| ||| ||| | |||||||| || || |||||||| ||| Sbjct: 12835086 cttgttgttggagtttgcttgagtctcagcatagcaaacattgttggcttcaccaagtgc 12835145 Query: 559 aacaaag 565 ||||||| Sbjct: 12835146 aacaaag 12835152 Score = 121 bits (61), Expect = 5e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 232 atctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagc 291 ||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 12832571 atctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagt 12832630 Query: 292 ggaaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtg 351 || |||||| |||| ||||| || |||||||||||||| || || || || || || ||| Sbjct: 12832631 gggaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtg 12832690 Query: 352 tggaagttcgagtgcct 368 |||||||| |||||||| Sbjct: 12832691 tggaagtttgagtgcct 12832707 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 377 agtctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436 ||||||| ||| |||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 12832797 agtctcttgctaggatgaacaagaaggactcatggctgttctggtggactctgtacttga 12832856
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 133 bits (67), Expect = 1e-27 Identities = 112/127 (88%) Strand = Plus / Plus Query: 439 gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498 |||||||||||||| |||||| |||||| |||||||| |||||| | |||||||||||| Sbjct: 115425 gctgctgcatggattgttcttgggatattctcactcatcagacttcatgctgattacctt 115484 Query: 499 cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558 |||||||||||||||||||||| ||| ||| | |||||||| || || |||||||| ||| Sbjct: 115485 cttgttgttggagtttgcttgagtctcagcatagcaaacattgttggcttcaccaagtgc 115544 Query: 559 aacaaag 565 ||||||| Sbjct: 115545 aacaaag 115551 Score = 121 bits (61), Expect = 5e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 232 atctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagc 291 ||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 112970 atctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagt 113029 Query: 292 ggaaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtg 351 || |||||| |||| ||||| || |||||||||||||| || || || || || || ||| Sbjct: 113030 gggaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtg 113089 Query: 352 tggaagttcgagtgcct 368 |||||||| |||||||| Sbjct: 113090 tggaagtttgagtgcct 113106 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 377 agtctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436 ||||||| ||| |||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 113196 agtctcttgctaggatgaacaagaaggactcatggctgttctggtggactctgtacttga 113255
>dbj|AK228273.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-72-H04 Length = 929 Score = 129 bits (65), Expect = 2e-26 Identities = 298/373 (79%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207 ||||| || |||||||| |||||||||| | ||| ||||||| ||||| |||| | Sbjct: 171 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 230 Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267 |||||| | || ||||| |||||||||||||| |||| || || ||||| || |||||| Sbjct: 231 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 290 Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327 ||||||||||| ||||||||||| || | |||||||| || || | |||||||| ||| Sbjct: 291 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 350 Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387 || | ||| || | ||||| ||||| ||||||| || || ||||||| | ||| Sbjct: 351 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 410 Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446 ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || ||||| Sbjct: 411 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 469 Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506 |||| | || |||| | ||||||| || |||||| || ||||||| || || |||||||| Sbjct: 470 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 529 Query: 507 tggagtttgcttg 519 ||| ||||||||| Sbjct: 530 tggcgtttgcttg 542
>ref|NM_100803.3| Arabidopsis thaliana unknown protein (AT1G09330) mRNA, complete cds Length = 990 Score = 129 bits (65), Expect = 2e-26 Identities = 298/373 (79%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207 ||||| || |||||||| |||||||||| | ||| ||||||| ||||| |||| | Sbjct: 243 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 302 Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267 |||||| | || ||||| |||||||||||||| |||| || || ||||| || |||||| Sbjct: 303 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 362 Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327 ||||||||||| ||||||||||| || | |||||||| || || | |||||||| ||| Sbjct: 363 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 422 Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387 || | ||| || | ||||| ||||| ||||||| || || ||||||| | ||| Sbjct: 423 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 482 Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446 ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || ||||| Sbjct: 483 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 541 Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506 |||| | || |||| | ||||||| || |||||| || ||||||| || || |||||||| Sbjct: 542 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 601 Query: 507 tggagtttgcttg 519 ||| ||||||||| Sbjct: 602 tggcgtttgcttg 614
>gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete sequence Length = 935 Score = 129 bits (65), Expect = 2e-26 Identities = 298/373 (79%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207 ||||| || |||||||| |||||||||| | ||| ||||||| ||||| |||| | Sbjct: 213 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 272 Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267 |||||| | || ||||| |||||||||||||| |||| || || ||||| || |||||| Sbjct: 273 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 332 Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327 ||||||||||| ||||||||||| || | |||||||| || || | |||||||| ||| Sbjct: 333 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 392 Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387 || | ||| || | ||||| ||||| ||||||| || || ||||||| | ||| Sbjct: 393 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 452 Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446 ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || ||||| Sbjct: 453 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 511 Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506 |||| | || |||| | ||||||| || |||||| || ||||||| || || |||||||| Sbjct: 512 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 571 Query: 507 tggagtttgcttg 519 ||| ||||||||| Sbjct: 572 tggcgtttgcttg 584
>gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds Length = 561 Score = 129 bits (65), Expect = 2e-26 Identities = 298/373 (79%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207 ||||| || |||||||| |||||||||| | ||| ||||||| ||||| |||| | Sbjct: 55 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 114 Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267 |||||| | || ||||| |||||||||||||| |||| || || ||||| || |||||| Sbjct: 115 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 174 Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327 ||||||||||| ||||||||||| || | |||||||| || || | |||||||| ||| Sbjct: 175 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 234 Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387 || | ||| || | ||||| ||||| ||||||| || || ||||||| | ||| Sbjct: 235 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 294 Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446 ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || ||||| Sbjct: 295 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 353 Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506 |||| | || |||| | ||||||| || |||||| || ||||||| || || |||||||| Sbjct: 354 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 413 Query: 507 tggagtttgcttg 519 ||| ||||||||| Sbjct: 414 tggcgtttgcttg 426
>emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 129 bits (65), Expect = 2e-26 Identities = 298/373 (79%), Gaps = 2/373 (0%) Strand = Plus / Plus Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207 ||||| || |||||||| |||||||||| | ||| ||||||| ||||| |||| | Sbjct: 243 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 302 Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267 |||||| | || ||||| |||||||||||||| |||| || || ||||| || |||||| Sbjct: 303 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 362 Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327 ||||||||||| ||||||||||| || | |||||||| || || | |||||||| ||| Sbjct: 363 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 422 Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387 || | ||| || | ||||| ||||| ||||||| || || ||||||| | ||| Sbjct: 423 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 482 Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446 ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || ||||| Sbjct: 483 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 541 Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506 |||| | || |||| | ||||||| || |||||| || ||||||| || || |||||||| Sbjct: 542 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 601 Query: 507 tggagtttgcttg 519 ||| ||||||||| Sbjct: 602 tggcgtttgcttg 614
>emb|X54689.1|TAAGCNN17 Wheat alpha-gliadin pseudogene (clone CNNE17) Length = 3566 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 632 catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691 ||||||||||| | || |||||| | |||||||||||||||||||||||||||||| || Sbjct: 3437 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3378 Query: 692 acatacaactgtgttacc 709 |||| |||| | |||||| Sbjct: 3377 acatgcaacagggttacc 3360
>emb|X54688.1|TAAGCNN35 Wheat alpha-gliadin pseudogene (clone CNN35) Length = 3573 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 632 catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691 ||||||||||| | || |||||| | |||||||||||||||||||||||||||||| || Sbjct: 3443 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3384 Query: 692 acatacaactgtgttacc 709 |||| |||| | |||||| Sbjct: 3383 acatgcaacagggttacc 3366
>emb|X54517.1|TAAGCNN16 Wheat alpha-gliadin pseudogene (clone CNN16) Length = 3581 Score = 75.8 bits (38), Expect = 3e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 632 catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691 ||||||||||| | || |||||| | |||||||||||||||||||||||||||||| || Sbjct: 3452 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3393 Query: 692 acatacaactgtgttacc 709 |||| |||| | |||||| Sbjct: 3392 acatgcaacagggttacc 3375
>gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J12 sequence, complete sequence Length = 16549 Score = 71.9 bits (36), Expect = 4e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 385 gctcggatgaacaaaaaagactcatggctgttctggtggactctttac 432 |||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 12049 gctcggatgaacaagaaagactcatggcttttctggtggacactttac 12002 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 220 agcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtg 279 ||||| |||||||||||||| |||| || || ||||| || ||||||||||||||||| Sbjct: 12335 agctttgtcatcatctttgtagtcactgttcttcttgctgctcttgacttctgggtggtt 12276 Query: 280 aagaatgtcag 290 ||||||||||| Sbjct: 12275 aagaatgtcag 12265 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Minus Query: 442 gctgcatggatcattcttgcgatattttcactcattagacttgaagctgattaccttctt 501 ||||||||| | || |||| | ||||||| || |||||| || ||||||| || || ||| Sbjct: 11321 gctgcatggtttatccttggggtattttctctgattagatttcaagctgactatctgctt 11262 Query: 502 gttgttggagtttgcttg 519 |||||||| ||||||||| Sbjct: 11261 gttgttggcgtttgcttg 11244
>gb|AC189331.1| Brassica rapa subsp. pekinensis clone KBrB037O12, complete sequence Length = 109500 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 385 gctcggatgaacaaaaaagactcatggctgttctggtggactctttac 432 |||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 10772 gctcggatgaacaagaaagactcgtggcttttctggtggacgctttac 10725 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 220 agcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtg 279 ||||| || ||||||||||| | || || || ||||| |||||||||||||||||||| Sbjct: 11023 agctttgtaatcatctttgtggtgactgttcttcttgcggcgcttgacttctgggtggtt 10964 Query: 280 aagaatgt 287 |||||||| Sbjct: 10963 aagaatgt 10956
>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence Length = 89397 Score = 61.9 bits (31), Expect = 4e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 463 atattttcactcattagacttgaagctgattaccttcttgttgttggagtttgcttgact 522 ||||| |||||||| || ||| |||||||||| || |||||||| |||||||| |||| Sbjct: 57271 atattctcactcataaggcttcaagctgattatctccttgttgtaggagtttgtctgacc 57212 Query: 523 ctaagccttgcaaacatcgtggggttcaccaaatgcaacaaag 565 || ||| ||||||| || || || || ||||||||||| |||| Sbjct: 57211 cttagcattgcaaatattgttggttttaccaaatgcaaaaaag 57169 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 385 gctcggatgaacaaaaaagactcatggctgttctggtggac 425 |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 57991 gctcggatgaacaagaaggactcatggcttttctggtggac 57951
>gb|BT028179.1| Gasterosteus aculeatus clone CNB149-F06 mRNA sequence Length = 997 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 301 ctggtcgggcttcgttggtggaatgagattgacga 335 |||||||| || |||||||||||| |||||||||| Sbjct: 378 ctggtcggcctgcgttggtggaatcagattgacga 412
>emb|CT978684.2| Mouse DNA sequence from clone WI1-572B3 on chromosome 4, complete sequence Length = 40943 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 394 aacaaaaaagactcatggctgtt 416 ||||||||||||||||||||||| Sbjct: 40824 aacaaaaaagactcatggctgtt 40802
>emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chromosome 4, complete sequence Length = 193363 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 394 aacaaaaaagactcatggctgtt 416 ||||||||||||||||||||||| Sbjct: 135533 aacaaaaaagactcatggctgtt 135555
>ref|XM_001077686.1| PREDICTED: Rattus norvegicus similar to Protein FAM18B (LOC687358), mRNA Length = 1742 Score = 44.1 bits (22), Expect = 0.91 Identities = 64/78 (82%) Strand = Plus / Plus Query: 264 tgacttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaa 323 |||||| |||| ||||||||||||| ||| || || ||||||| || ||||||||||| Sbjct: 347 tgacttttgggcagtgaagaatgtcaccggtagactaatggtcggcctacgttggtggaa 406 Query: 324 tgagattgacgacgatgg 341 | | || ||||| ||||| Sbjct: 407 tcatatcgacgaggatgg 424
>dbj|AB222076.1| Lilium hybrid division I LHbHLH2 mRNA for bHLH transcription factor, complete cds Length = 2406 Score = 44.1 bits (22), Expect = 0.91 Identities = 25/26 (96%) Strand = Plus / Minus Query: 223 ttcgtcatcatctttgtcatcaccgt 248 |||||||||||| ||||||||||||| Sbjct: 891 ttcgtcatcatcattgtcatcaccgt 866
>ref|XM_422322.2| PREDICTED: Gallus gallus polypyrimidine tract binding protein 2 (PTBP2), mRNA Length = 3169 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 915 aatacaaaaggcctttttttt 935 ||||||||||||||||||||| Sbjct: 2192 aatacaaaaggcctttttttt 2172
>ref|XM_001077332.1| PREDICTED: Rattus norvegicus adenylate cyclase 9 (predicted) (Adcy9_predicted), mRNA Length = 6399 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 ttgcaaacatcgtggggttcaccaa 554 ||||| ||||||||||||||||||| Sbjct: 1266 ttgcagacatcgtggggttcaccaa 1290
>ref|XM_001062146.1| PREDICTED: Rattus norvegicus hypothetical LOC300207 (predicted) (RGD1305928_predicted), mRNA Length = 452 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 ctcatggctgttctggtggac 425 ||||||||||||||||||||| Sbjct: 111 ctcatggctgttctggtggac 91
>ref|XM_217031.3| PREDICTED: Rattus norvegicus hypothetical LOC300207 (predicted) (RGD1305928_predicted), mRNA Length = 584 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 ctcatggctgttctggtggac 425 ||||||||||||||||||||| Sbjct: 243 ctcatggctgttctggtggac 223
>gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome 13, complete sequence Length = 229672 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 ccaagggaagaagaaagaggc 64 ||||||||||||||||||||| Sbjct: 97988 ccaagggaagaagaaagaggc 97968
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 atggctgttctggtggactct 428 ||||||||||||||||||||| Sbjct: 3807637 atggctgttctggtggactct 3807617
>gb|AC108137.8| Homo sapiens chromosome 15, clone RP11-941F15, complete sequence Length = 177015 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 634 tcatccctgcagtcagcattc 654 ||||||||||||||||||||| Sbjct: 78760 tcatccctgcagtcagcattc 78740
>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete sequence Length = 88068 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 ttgttgttggagtttgcttgactct 524 ||||| ||||||||||||||||||| Sbjct: 5946 ttgttattggagtttgcttgactct 5970
>emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on chromosome 9 Contains a transcription factor IIA small 12 kDa subunit (GTF2A2) pseudogene, complete sequence Length = 95922 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 caacaaagatgccaagaagaa 578 ||||||||||||||||||||| Sbjct: 5382 caacaaagatgccaagaagaa 5402
>gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, complete sequence Length = 162060 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 tcatccctgcagtcagcattc 654 ||||||||||||||||||||| Sbjct: 142415 tcatccctgcagtcagcattc 142435
>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence Length = 138426 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tcgtcatcatctttgtcatca 244 ||||||||||||||||||||| Sbjct: 122504 tcgtcatcatctttgtcatca 122524
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 cttcaaggcgtcggcgctggc 188 ||||||||||||||||||||| Sbjct: 1702890 cttcaaggcgtcggcgctggc 1702910
>emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chromosome 13, complete sequence Length = 255133 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tcgtcatcatctttgtcatca 244 ||||||||||||||||||||| Sbjct: 27243 tcgtcatcatctttgtcatca 27263
>emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on chromosome X, complete sequence Length = 169838 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 700 ctgtgttaccttctgtcaaag 720 ||||||||||||||||||||| Sbjct: 75851 ctgtgttaccttctgtcaaag 75831
>emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chromosome 2, complete sequence Length = 164288 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 ttcgtcatcatctttgtcatc 243 ||||||||||||||||||||| Sbjct: 103963 ttcgtcatcatctttgtcatc 103943 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 186,163,749 Number of extensions: 9415917 Number of successful extensions: 260862 Number of sequences better than 10.0: 43 Number of HSP's gapped: 260854 Number of HSP's successfully gapped: 68 Length of query: 954 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 931 Effective length of database: 18,503,978,556 Effective search space: 17227204035636 Effective search space used: 17227204035636 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)