ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56d22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT830850.1| Oryza sativa (indica cultivar-group) cDNA clone:... 589 e-165
2ref|NM_001061249.1| Oryza sativa (japonica cultivar-group) Os05g... 589 e-165
3dbj|AK103137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 589 e-165
4gb|AY105506.1| Zea mays PCO099200 mRNA sequence 527 e-146
5ref|NM_001049465.1| Oryza sativa (japonica cultivar-group) Os01g... 361 3e-96
6dbj|AK121761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 3e-96
7dbj|AK064784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 3e-96
8dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 2e-60
9gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome... 212 2e-51
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 1e-27
12dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 133 1e-27
13dbj|AK228273.1| Arabidopsis thaliana mRNA for hypothetical prote... 129 2e-26
14ref|NM_100803.3| Arabidopsis thaliana unknown protein (AT1G09330... 129 2e-26
15gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete s... 129 2e-26
16gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds 129 2e-26
17emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Co... 129 2e-26
18emb|X54689.1|TAAGCNN17 Wheat alpha-gliadin pseudogene (clone CNN... 76 3e-10
19emb|X54688.1|TAAGCNN35 Wheat alpha-gliadin pseudogene (clone CNN35) 76 3e-10
20emb|X54517.1|TAAGCNN16 Wheat alpha-gliadin pseudogene (clone CNN16) 76 3e-10
21gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J1... 72 4e-09
22gb|AC189331.1| Brassica rapa subsp. pekinensis clone KBrB037O12,... 64 1e-06
23gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence 62 4e-06
24gb|BT028179.1| Gasterosteus aculeatus clone CNB149-F06 mRNA sequ... 46 0.23
25emb|CT978684.2| Mouse DNA sequence from clone WI1-572B3 on chrom... 46 0.23
26emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chr... 46 0.23
27ref|XM_001077686.1| PREDICTED: Rattus norvegicus similar to Prot... 44 0.91
28dbj|AB222076.1| Lilium hybrid division I LHbHLH2 mRNA for bHLH t... 44 0.91
29ref|XM_422322.2| PREDICTED: Gallus gallus polypyrimidine tract b... 42 3.6
30ref|XM_001077332.1| PREDICTED: Rattus norvegicus adenylate cycla... 42 3.6
31ref|XM_001062146.1| PREDICTED: Rattus norvegicus hypothetical LO... 42 3.6
32ref|XM_217031.3| PREDICTED: Rattus norvegicus hypothetical LOC30... 42 3.6
33gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome... 42 3.6
34dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 3.6
35gb|AC108137.8| Homo sapiens chromosome 15, clone RP11-941F15, co... 42 3.6
36gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map... 42 3.6
37emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on ch... 42 3.6
38gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, com... 42 3.6
39gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, compl... 42 3.6
40gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 3.6
41emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chro... 42 3.6
42emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on ch... 42 3.6
43emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chr... 42 3.6

>emb|CT830850.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA006A21, full
           insert sequence
          Length = 929
 Score =  589 bits (297), Expect = e-165
 Identities = 492/557 (88%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156
           ||||| |||||||| |||||||| || | ||||||||||||||||||| | || ||||||
Sbjct: 68  ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 127

                                                                       
Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216
           || |||||||||||||||||   |||||||| |||||||||| | || ||||||||||||
Sbjct: 128 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 187

                                                                       
Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276
           ||||||||||||||||| || |||||||||||| |||| || ||||| ||||||||||||
Sbjct: 188 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 247

                                                                       
Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336
           ||||||||||| || || |||||| |||||||| | || |||||||||||||| ||||||
Sbjct: 248 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 307

                                                                       
Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396
           || || ||||| ||||||||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct: 308 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 367

                                                                       
Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456
           ||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 368 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 427

                                                                       
Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516
           |||| |||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 428 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 487

                                                                       
Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576
           ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 488 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 547

                                                                       
Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636
           || ||||| | ||    ||||  |   |||||||| || |||||||||||||||||||| 
Sbjct: 548 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 607

                            
Query: 637 tccctgcagtcagcatt 653
            ||||||| ||||||||
Sbjct: 608 accctgcaatcagcatt 624



to top

>ref|NM_001061249.1| Oryza sativa (japonica cultivar-group) Os05g0159100 (Os05g0159100)
           mRNA, complete cds
          Length = 1083

 Score =  589 bits (297), Expect = e-165
 Identities = 492/557 (88%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156
           ||||| |||||||| |||||||| || | ||||||||||||||||||| | || ||||||
Sbjct: 140 ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 199

                                                                       
Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216
           || |||||||||||||||||   |||||||| |||||||||| | || ||||||||||||
Sbjct: 200 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 259

                                                                       
Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276
           ||||||||||||||||| || |||||||||||| |||| || ||||| ||||||||||||
Sbjct: 260 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 319

                                                                       
Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336
           ||||||||||| || || |||||| |||||||| | || |||||||||||||| ||||||
Sbjct: 320 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 379

                                                                       
Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396
           || || ||||| ||||||||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct: 380 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 439

                                                                       
Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456
           ||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 440 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 499

                                                                       
Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516
           |||| |||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 559

                                                                       
Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576
           ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 560 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 619

                                                                       
Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636
           || ||||| | ||    ||||  |   |||||||| || |||||||||||||||||||| 
Sbjct: 620 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 679

                            
Query: 637 tccctgcagtcagcatt 653
            ||||||| ||||||||
Sbjct: 680 accctgcaatcagcatt 696



to top

>dbj|AK103137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120E14, full
           insert sequence
          Length = 1085

 Score =  589 bits (297), Expect = e-165
 Identities = 492/557 (88%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggatccatggatcggccccaggtggtcagcgagaactatgccaatcctataacatgcctc 156
           ||||| |||||||| |||||||| || | ||||||||||||||||||| | || ||||||
Sbjct: 142 ggatcgatggatcgaccccaggtagttaccgagaactatgccaatcctgtgacgtgcctc 201

                                                                       
Query: 157 ttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcgctcttcgtg 216
           || |||||||||||||||||   |||||||| |||||||||| | || ||||||||||||
Sbjct: 202 tttcatgtgctcttcaaggctggggcgctggtgttctacatcttgttttcgctcttcgtg 261

                                                                       
Query: 217 aagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtg 276
           ||||||||||||||||| || |||||||||||| |||| || ||||| ||||||||||||
Sbjct: 262 aagagcttcgtcatcatattcgtcatcaccgtgttcctggcggcgctcgacttctgggtg 321

                                                                       
Query: 277 gtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgagattgacgac 336
           ||||||||||| || || |||||| |||||||| | || |||||||||||||| ||||||
Sbjct: 322 gtgaagaatgtgagtggcaggatattggtcgggatgcggtggtggaatgagatcgacgac 381

                                                                       
Query: 337 gatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgctcggatgaac 396
           || || ||||| ||||||||||| ||||||||||| |||||| |||| ||||||||||||
Sbjct: 382 gagggcaacagcgtgtggaagtttgagtgcctcgatggggaggctcttgctcggatgaac 441

                                                                       
Query: 397 aaaaaagactcatggctgttctggtggactctttacttgaacgctgctgcatggatcatt 456
           ||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 442 aaaaaggactcgtggctgttctggtggactctttacttgactgctgctgcatggatcatt 501

                                                                       
Query: 457 cttgcgatattttcactcattagacttgaagctgattaccttcttgttgttggagtttgc 516
           |||| |||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 cttgggatattttcacttatcagacttgaagctgactaccttcttgttgttggagtttgc 561

                                                                       
Query: 517 ttgactctaagccttgcaaacatcgtggggttcaccaaatgcaacaaagatgccaagaag 576
           ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||
Sbjct: 562 ttgactctaagccttgcaaacattgttgggttcaccagatgcaacaaagatgccaagaag 621

                                                                       
Query: 577 aacatccgagcttttgctgaaaatgccgctcaaaacgccatcacatcccgcatcacatca 636
           || ||||| | ||    ||||  |   |||||||| || |||||||||||||||||||| 
Sbjct: 622 aatatccggggttactttgaaggtcatgctcaaaatgcgatcacatcccgcatcacatcc 681

                            
Query: 637 tccctgcagtcagcatt 653
            ||||||| ||||||||
Sbjct: 682 accctgcaatcagcatt 698



to top

>gb|AY105506.1| Zea mays PCO099200 mRNA sequence
          Length = 795

 Score =  527 bits (266), Expect = e-146
 Identities = 412/462 (89%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173
           ||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||| |||||
Sbjct: 148 ccaggtggttagcgagaattatgccaatcccataacatgcttcttccatgtgctattcaa 207

                                                                       
Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233
           ||||  |||||| || ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 208 ggcgggggcgctagccttctacatcctattctcgctctttgtgaagagcttcgtcatcat 267

                                                                       
Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293
           ||| || ||||| |||||||| || |||||||||||||||||||||||||| ||||| ||
Sbjct: 268 cttcgtgatcacggtgctcctcgcagcgcttgacttctgggtggtgaagaacgtcagtgg 327

                                                                       
Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353
            |||||||| |||||||| || |||||||||||||| || || || || |||||||||||
Sbjct: 328 caggatactagtcgggctgcggtggtggaatgagatcgatgatgacggaaacagtgtgtg 387

                                                                       
Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413
           |||||| || ||||| || |||||||||||||||||||||||||| || || ||||||||
Sbjct: 388 gaagtttgaatgccttgatggggagtctctcgctcggatgaacaanaaggattcatggct 447

                                                                       
Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473
           |||||||||||||||||||||||  ||||||||||||||| ||||||  |||||||||||
Sbjct: 448 gttctggtggactctttacttgactgctgctgcatggatcgttcttggtatattttcact 507

                                                                       
Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533
           ||| |  ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 508 catcangcttgaggctgattaccttcttgttgttggagtttgcttgantctaagcattgc 567

                                                     
Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575
           |||||| || || |||||| | ||||||||||||||||||||
Sbjct: 568 aaacattgttggattcaccnagtgcaacaaagatgccaagaa 609



to top

>ref|NM_001049465.1| Oryza sativa (japonica cultivar-group) Os01g0331900 (Os01g0331900)
           mRNA, complete cds
          Length = 1085

 Score =  361 bits (182), Expect = 3e-96
 Identities = 392/462 (84%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173
           |||||||||| ||||||| ||||| ||||| |  |||||  |||||||||| ||||||||
Sbjct: 157 ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 216

                                                                       
Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233
           |||   |||  ||||||||||||| || |   |||| |||||||  | ||| || || ||
Sbjct: 217 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 276

                                                                       
Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293
           ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||
Sbjct: 277 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 336

                                                                       
Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353
            |||||| |||| ||||| || |||||||||||||| || || || || || || |||||
Sbjct: 337 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 396

                                                                       
Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413
           |||||| |||||||| || || |||||||| ||| |||||||||| || |||||||||||
Sbjct: 397 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 456

                                                                       
Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473
           ||||||||||||||| |||||||  ||||||||||||||  |||||| |||||| |||||
Sbjct: 457 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 516

                                                                       
Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533
           ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 517 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 576

                                                     
Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575
           |||||| || || |||||||| ||||||||||||||||||||
Sbjct: 577 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 618



to top

>dbj|AK121761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090D14, full
           insert sequence
          Length = 1086

 Score =  361 bits (182), Expect = 3e-96
 Identities = 392/462 (84%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173
           |||||||||| ||||||| ||||| ||||| |  |||||  |||||||||| ||||||||
Sbjct: 158 ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 217

                                                                       
Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233
           |||   |||  ||||||||||||| || |   |||| |||||||  | ||| || || ||
Sbjct: 218 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 277

                                                                       
Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293
           ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||
Sbjct: 278 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 337

                                                                       
Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353
            |||||| |||| ||||| || |||||||||||||| || || || || || || |||||
Sbjct: 338 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 397

                                                                       
Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413
           |||||| |||||||| || || |||||||| ||| |||||||||| || |||||||||||
Sbjct: 398 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 457

                                                                       
Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473
           ||||||||||||||| |||||||  ||||||||||||||  |||||| |||||| |||||
Sbjct: 458 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 517

                                                                       
Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533
           ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 518 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 577

                                                     
Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575
           |||||| || || |||||||| ||||||||||||||||||||
Sbjct: 578 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 619



to top

>dbj|AK064784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B15, full
           insert sequence
          Length = 987

 Score =  361 bits (182), Expect = 3e-96
 Identities = 392/462 (84%)
 Strand = Plus / Plus

                                                                       
Query: 114 ccaggtggtcagcgagaactatgccaatcctataacatgcctcttccatgtgctcttcaa 173
           |||||||||| ||||||| ||||| ||||| |  |||||  |||||||||| ||||||||
Sbjct: 66  ccaggtggtcggcgagaattatgcaaatccaaagacatgtttcttccatgtcctcttcaa 125

                                                                       
Query: 174 ggcgtcggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcat 233
           |||   |||  ||||||||||||| || |   |||| |||||||  | ||| || || ||
Sbjct: 126 ggcaggggcattggcgttctacatactgtctgcgctgttcgtgaccaactttgttattat 185

                                                                       
Query: 234 ctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcgg 293
           ||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||
Sbjct: 186 ctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagtgg 245

                                                                       
Query: 294 aaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtg 353
            |||||| |||| ||||| || |||||||||||||| || || || || || || |||||
Sbjct: 246 gaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtgtg 305

                                                                       
Query: 354 gaagttcgagtgcctcgacggggagtctctcgctcggatgaacaaaaaagactcatggct 413
           |||||| |||||||| || || |||||||| ||| |||||||||| || |||||||||||
Sbjct: 306 gaagtttgagtgccttgatggagagtctcttgctaggatgaacaagaaggactcatggct 365

                                                                       
Query: 414 gttctggtggactctttacttgaacgctgctgcatggatcattcttgcgatattttcact 473
           ||||||||||||||| |||||||  ||||||||||||||  |||||| |||||| |||||
Sbjct: 366 gttctggtggactctgtacttgactgctgctgcatggattgttcttgggatattctcact 425

                                                                       
Query: 474 cattagacttgaagctgattaccttcttgttgttggagtttgcttgactctaagccttgc 533
           ||| |||||| | |||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 426 catcagacttcatgctgattaccttcttgttgttggagtttgcttgagtctcagcatagc 485

                                                     
Query: 534 aaacatcgtggggttcaccaaatgcaacaaagatgccaagaa 575
           |||||| || || |||||||| ||||||||||||||||||||
Sbjct: 486 aaacattgttggcttcaccaagtgcaacaaagatgccaagaa 527



to top

>dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A04, full
           insert sequence
          Length = 876

 Score =  242 bits (122), Expect = 2e-60
 Identities = 200/226 (88%)
 Strand = Plus / Plus

                                                                       
Query: 428 tttacttgaacgctgctgcatggatcattcttgcgatattttcactcattagacttgaag 487
           |||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||
Sbjct: 1   tttacttgactgctgctgcatggatcattcttgggatattttcacttatcagacttgaag 60

                                                                       
Query: 488 ctgattaccttcttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggt 547
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 61  ctgactaccttcttgttgttggagtttgcttgactctaagccttgcaaacattgttgggt 120

                                                                       
Query: 548 tcaccaaatgcaacaaagatgccaagaagaacatccgagcttttgctgaaaatgccgctc 607
           |||||| |||||||||||||||||||||||| ||||| | ||    ||||  |   ||||
Sbjct: 121 tcaccagatgcaacaaagatgccaagaagaatatccggggttactttgaaggtcatgctc 180

                                                         
Query: 608 aaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653
           |||| || ||||||||||||||||||||  ||||||| ||||||||
Sbjct: 181 aaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 226



to top

>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017J22, complete sequence
          Length = 177153

 Score =  212 bits (107), Expect = 2e-51
 Identities = 176/199 (88%)
 Strand = Plus / Plus

                                                                         
Query: 180   ggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcatctttgt 239
             |||||||| |||||||||| | || ||||||||||||||||||||||||||||| || ||
Sbjct: 58986 ggcgctggtgttctacatcttgttttcgctcttcgtgaagagcttcgtcatcatattcgt 59045

                                                                         
Query: 240   catcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcggaaggat 299
             |||||||||| |||| || ||||| ||||||||||||||||||||||| || || |||||
Sbjct: 59046 catcaccgtgttcctggcggcgctcgacttctgggtggtgaagaatgtgagtggcaggat 59105

                                                                         
Query: 300   actggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtggaagtt 359
             | |||||||| | || |||||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 59106 attggtcgggatgcggtggtggaatgagatcgacgacgagggcaacagcgtgtggaagtt 59165

                                
Query: 360   cgagtgcctcgacggggag 378
              ||||||||||| ||||||
Sbjct: 59166 tgagtgcctcgatggggag 59184



 Score =  196 bits (99), Expect = 1e-46
 Identities = 120/127 (94%)
 Strand = Plus / Plus

                                                                         
Query: 439   gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498
             |||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||
Sbjct: 60279 gctgctgcatggatcattcttgggatattttcacttatcagacttgaagctgactacctt 60338

                                                                         
Query: 499   cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558
             ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||
Sbjct: 60339 cttgttgttggagtttgcttgactctaagccttgcaaacattgttgggttcaccagatgc 60398

                    
Query: 559   aacaaag 565
             |||||||
Sbjct: 60399 aacaaag 60405



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                      
Query: 380   ctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436
             |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 59273 ctcttgctcggatgaacaaaaaggactcgtggctgttctggtggactctttacttga 59329



 Score = 67.9 bits (34), Expect = 6e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 126   cgagaactatgccaatcctataacatgcctcttccatgtgctcttcaagg 175
             ||||||||||||||||||| | || |||||||| ||||||||||||||||
Sbjct: 58831 cgagaactatgccaatcctgtgacgtgcctctttcatgtgctcttcaagg 58880



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 604   gctcaaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653
             |||||||| || ||||||||||||||||||||  ||||||| ||||||||
Sbjct: 60940 gctcaaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 60989



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  212 bits (107), Expect = 2e-51
 Identities = 176/199 (88%)
 Strand = Plus / Plus

                                                                           
Query: 180     ggcgctggcgttctacatcctcttctcgctcttcgtgaagagcttcgtcatcatctttgt 239
               |||||||| |||||||||| | || ||||||||||||||||||||||||||||| || ||
Sbjct: 3429504 ggcgctggtgttctacatcttgttttcgctcttcgtgaagagcttcgtcatcatattcgt 3429563

                                                                           
Query: 240     catcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagcggaaggat 299
               |||||||||| |||| || ||||| ||||||||||||||||||||||| || || |||||
Sbjct: 3429564 catcaccgtgttcctggcggcgctcgacttctgggtggtgaagaatgtgagtggcaggat 3429623

                                                                           
Query: 300     actggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtgtggaagtt 359
               | |||||||| | || |||||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 3429624 attggtcgggatgcggtggtggaatgagatcgacgacgagggcaacagcgtgtggaagtt 3429683

                                  
Query: 360     cgagtgcctcgacggggag 378
                ||||||||||| ||||||
Sbjct: 3429684 tgagtgcctcgatggggag 3429702



 Score =  196 bits (99), Expect = 1e-46
 Identities = 120/127 (94%)
 Strand = Plus / Plus

                                                                           
Query: 439     gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498
               |||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||
Sbjct: 3430797 gctgctgcatggatcattcttgggatattttcacttatcagacttgaagctgactacctt 3430856

                                                                           
Query: 499     cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558
               ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||
Sbjct: 3430857 cttgttgttggagtttgcttgactctaagccttgcaaacattgttgggttcaccagatgc 3430916

                      
Query: 559     aacaaag 565
               |||||||
Sbjct: 3430917 aacaaag 3430923



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                        
Query: 380     ctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436
               |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 3429791 ctcttgctcggatgaacaaaaaggactcgtggctgttctggtggactctttacttga 3429847



 Score = 67.9 bits (34), Expect = 6e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                 
Query: 126     cgagaactatgccaatcctataacatgcctcttccatgtgctcttcaagg 175
               ||||||||||||||||||| | || |||||||| ||||||||||||||||
Sbjct: 3429349 cgagaactatgccaatcctgtgacgtgcctctttcatgtgctcttcaagg 3429398



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 604     gctcaaaacgccatcacatcccgcatcacatcatccctgcagtcagcatt 653
               |||||||| || ||||||||||||||||||||  ||||||| ||||||||
Sbjct: 3431458 gctcaaaatgcgatcacatcccgcatcacatccaccctgcaatcagcatt 3431507



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  133 bits (67), Expect = 1e-27
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                            
Query: 439      gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498
                ||||||||||||||  |||||| |||||| |||||||| |||||| | ||||||||||||
Sbjct: 12835026 gctgctgcatggattgttcttgggatattctcactcatcagacttcatgctgattacctt 12835085

                                                                            
Query: 499      cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558
                |||||||||||||||||||||| ||| ||| | |||||||| || || |||||||| |||
Sbjct: 12835086 cttgttgttggagtttgcttgagtctcagcatagcaaacattgttggcttcaccaagtgc 12835145

                       
Query: 559      aacaaag 565
                |||||||
Sbjct: 12835146 aacaaag 12835152



 Score =  121 bits (61), Expect = 5e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                            
Query: 232      atctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagc 291
                ||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| 
Sbjct: 12832571 atctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagt 12832630

                                                                            
Query: 292      ggaaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtg 351
                || |||||| |||| ||||| || |||||||||||||| || || || || || || |||
Sbjct: 12832631 gggaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtg 12832690

                                 
Query: 352      tggaagttcgagtgcct 368
                |||||||| ||||||||
Sbjct: 12832691 tggaagtttgagtgcct 12832707



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 377      agtctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436
                ||||||| ||| |||||||||| || |||||||||||||||||||||||||| |||||||
Sbjct: 12832797 agtctcttgctaggatgaacaagaaggactcatggctgttctggtggactctgtacttga 12832856



to top

>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489E06
          Length = 140229

 Score =  133 bits (67), Expect = 1e-27
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                          
Query: 439    gctgctgcatggatcattcttgcgatattttcactcattagacttgaagctgattacctt 498
              ||||||||||||||  |||||| |||||| |||||||| |||||| | ||||||||||||
Sbjct: 115425 gctgctgcatggattgttcttgggatattctcactcatcagacttcatgctgattacctt 115484

                                                                          
Query: 499    cttgttgttggagtttgcttgactctaagccttgcaaacatcgtggggttcaccaaatgc 558
              |||||||||||||||||||||| ||| ||| | |||||||| || || |||||||| |||
Sbjct: 115485 cttgttgttggagtttgcttgagtctcagcatagcaaacattgttggcttcaccaagtgc 115544

                     
Query: 559    aacaaag 565
              |||||||
Sbjct: 115545 aacaaag 115551



 Score =  121 bits (61), Expect = 5e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                          
Query: 232    atctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtgaagaatgtcagc 291
              ||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| 
Sbjct: 112970 atctttgtcatcaccgtgctcctggcagcacttgacttctgggtggtcaagaacgtcagt 113029

                                                                          
Query: 292    ggaaggatactggtcgggcttcgttggtggaatgagattgacgacgatggtaacagtgtg 351
              || |||||| |||| ||||| || |||||||||||||| || || || || || || |||
Sbjct: 113030 gggaggatattggttgggctgcgctggtggaatgagatcgatgatgagggcaatagcgtg 113089

                               
Query: 352    tggaagttcgagtgcct 368
              |||||||| ||||||||
Sbjct: 113090 tggaagtttgagtgcct 113106



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 377    agtctctcgctcggatgaacaaaaaagactcatggctgttctggtggactctttacttga 436
              ||||||| ||| |||||||||| || |||||||||||||||||||||||||| |||||||
Sbjct: 113196 agtctcttgctaggatgaacaagaaggactcatggctgttctggtggactctgtacttga 113255



to top

>dbj|AK228273.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL14-72-H04
          Length = 929

 Score =  129 bits (65), Expect = 2e-26
 Identities = 298/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207
           ||||| || |||||||| ||||||||||   | ||| ||||||| ||||| ||||   | 
Sbjct: 171 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 230

                                                                       
Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267
           |||||| | || ||||| ||||||||||||||  |||| || || ||||| || ||||||
Sbjct: 231 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 290

                                                                       
Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327
           ||||||||||| ||||||||||| ||  | |||||||| || ||  | |||||||| |||
Sbjct: 291 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 350

                                                                       
Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387
           ||  | |||   ||  | ||||| ||||| |||||||  || ||   ||||||| | |||
Sbjct: 351 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 410

                                                                       
Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446
           ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || |||||
Sbjct: 411 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 469

                                                                       
Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506
           |||| | || |||| | ||||||| || |||||| || ||||||| || || ||||||||
Sbjct: 470 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 529

                        
Query: 507 tggagtttgcttg 519
           ||| |||||||||
Sbjct: 530 tggcgtttgcttg 542



to top

>ref|NM_100803.3| Arabidopsis thaliana unknown protein (AT1G09330) mRNA, complete cds
          Length = 990

 Score =  129 bits (65), Expect = 2e-26
 Identities = 298/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207
           ||||| || |||||||| ||||||||||   | ||| ||||||| ||||| ||||   | 
Sbjct: 243 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 302

                                                                       
Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267
           |||||| | || ||||| ||||||||||||||  |||| || || ||||| || ||||||
Sbjct: 303 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 362

                                                                       
Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327
           ||||||||||| ||||||||||| ||  | |||||||| || ||  | |||||||| |||
Sbjct: 363 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 422

                                                                       
Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387
           ||  | |||   ||  | ||||| ||||| |||||||  || ||   ||||||| | |||
Sbjct: 423 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 482

                                                                       
Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446
           ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || |||||
Sbjct: 483 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 541

                                                                       
Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506
           |||| | || |||| | ||||||| || |||||| || ||||||| || || ||||||||
Sbjct: 542 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 601

                        
Query: 507 tggagtttgcttg 519
           ||| |||||||||
Sbjct: 602 tggcgtttgcttg 614



to top

>gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete sequence
          Length = 935

 Score =  129 bits (65), Expect = 2e-26
 Identities = 298/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207
           ||||| || |||||||| ||||||||||   | ||| ||||||| ||||| ||||   | 
Sbjct: 213 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 272

                                                                       
Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267
           |||||| | || ||||| ||||||||||||||  |||| || || ||||| || ||||||
Sbjct: 273 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 332

                                                                       
Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327
           ||||||||||| ||||||||||| ||  | |||||||| || ||  | |||||||| |||
Sbjct: 333 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 392

                                                                       
Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387
           ||  | |||   ||  | ||||| ||||| |||||||  || ||   ||||||| | |||
Sbjct: 393 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 452

                                                                       
Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446
           ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || |||||
Sbjct: 453 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 511

                                                                       
Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506
           |||| | || |||| | ||||||| || |||||| || ||||||| || || ||||||||
Sbjct: 512 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 571

                        
Query: 507 tggagtttgcttg 519
           ||| |||||||||
Sbjct: 572 tggcgtttgcttg 584



to top

>gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds
          Length = 561

 Score =  129 bits (65), Expect = 2e-26
 Identities = 298/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207
           ||||| || |||||||| ||||||||||   | ||| ||||||| ||||| ||||   | 
Sbjct: 55  acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 114

                                                                       
Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267
           |||||| | || ||||| ||||||||||||||  |||| || || ||||| || ||||||
Sbjct: 115 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 174

                                                                       
Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327
           ||||||||||| ||||||||||| ||  | |||||||| || ||  | |||||||| |||
Sbjct: 175 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 234

                                                                       
Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387
           ||  | |||   ||  | ||||| ||||| |||||||  || ||   ||||||| | |||
Sbjct: 235 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 294

                                                                       
Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446
           ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || |||||
Sbjct: 295 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 353

                                                                       
Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506
           |||| | || |||| | ||||||| || |||||| || ||||||| || || ||||||||
Sbjct: 354 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 413

                        
Query: 507 tggagtttgcttg 519
           ||| |||||||||
Sbjct: 414 tggcgtttgcttg 426



to top

>emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 973

 Score =  129 bits (65), Expect = 2e-26
 Identities = 298/373 (79%), Gaps = 2/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 148 acatgcctcttccatgtgctcttcaaggcgtcggcgctggcgttctacatcctcttctcg 207
           ||||| || |||||||| ||||||||||   | ||| ||||||| ||||| ||||   | 
Sbjct: 243 acatgtcttttccatgttctcttcaagggtgctgcgttggcgttttacattctctctgct 302

                                                                       
Query: 208 ctcttcgtgaagagcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgac 267
           |||||| | || ||||| ||||||||||||||  |||| || || ||||| || ||||||
Sbjct: 303 ctcttcttcaacagctttgtcatcatctttgtagtcactgttcttcttgctgctcttgac 362

                                                                       
Query: 268 ttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaatgag 327
           ||||||||||| ||||||||||| ||  | |||||||| || ||  | |||||||| |||
Sbjct: 363 ttctgggtggttaagaatgtcagtgggcgtatactggttggtctcaggtggtggaacgag 422

                                                                       
Query: 328 attgacgacgatggtaacagtgtgtggaagttcgagtgcctcgacggggagtctctcgct 387
           ||  | |||   ||  | ||||| ||||| |||||||  || ||   ||||||| | |||
Sbjct: 423 atcaatgacttgggagaaagtgtctggaaattcgagtctcttgatcaggagtctttggct 482

                                                                       
Query: 388 cggatgaacaaaaaagactcatggctgttctggtggactcttta-cttgaacgctgctgc 446
           ||||||||||| |||||||||||||| ||||||||||| ||||| |||| | || |||||
Sbjct: 483 cggatgaacaagaaagactcatggcttttctggtggacactttaccttgca-gcagctgc 541

                                                                       
Query: 447 atggatcattcttgcgatattttcactcattagacttgaagctgattaccttcttgttgt 506
           |||| | || |||| | ||||||| || |||||| || ||||||| || || ||||||||
Sbjct: 542 atggtttatccttggggtattttctctgattagatttcaagctgactatctgcttgttgt 601

                        
Query: 507 tggagtttgcttg 519
           ||| |||||||||
Sbjct: 602 tggcgtttgcttg 614



to top

>emb|X54689.1|TAAGCNN17 Wheat alpha-gliadin pseudogene (clone CNNE17)
          Length = 3566

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 632  catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691
            ||||||||||| | || |||||| |  |||||||||||||||||||||||||||||| ||
Sbjct: 3437 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3378

                              
Query: 692  acatacaactgtgttacc 709
            |||| |||| | ||||||
Sbjct: 3377 acatgcaacagggttacc 3360



to top

>emb|X54688.1|TAAGCNN35 Wheat alpha-gliadin pseudogene (clone CNN35)
          Length = 3573

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 632  catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691
            ||||||||||| | || |||||| |  |||||||||||||||||||||||||||||| ||
Sbjct: 3443 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3384

                              
Query: 692  acatacaactgtgttacc 709
            |||| |||| | ||||||
Sbjct: 3383 acatgcaacagggttacc 3366



to top

>emb|X54517.1|TAAGCNN16 Wheat alpha-gliadin pseudogene (clone CNN16)
          Length = 3581

 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 632  catcatccctgcagtcagcattcggcatctgaagtccagattacacagaggcccaaaatt 691
            ||||||||||| | || |||||| |  |||||||||||||||||||||||||||||| ||
Sbjct: 3452 catcatccctgaaatcggcattcagtgtctgaagtccagattacacagaggcccaaattt 3393

                              
Query: 692  acatacaactgtgttacc 709
            |||| |||| | ||||||
Sbjct: 3392 acatgcaacagggttacc 3375



to top

>gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J12 sequence, complete
             sequence
          Length = 16549

 Score = 71.9 bits (36), Expect = 4e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                             
Query: 385   gctcggatgaacaaaaaagactcatggctgttctggtggactctttac 432
             |||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 12049 gctcggatgaacaagaaagactcatggcttttctggtggacactttac 12002



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 220   agcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtg 279
             ||||| ||||||||||||||  |||| || || ||||| || ||||||||||||||||| 
Sbjct: 12335 agctttgtcatcatctttgtagtcactgttcttcttgctgctcttgacttctgggtggtt 12276

                        
Query: 280   aagaatgtcag 290
             |||||||||||
Sbjct: 12275 aagaatgtcag 12265



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 442   gctgcatggatcattcttgcgatattttcactcattagacttgaagctgattaccttctt 501
             ||||||||| | || |||| | ||||||| || |||||| || ||||||| || || |||
Sbjct: 11321 gctgcatggtttatccttggggtattttctctgattagatttcaagctgactatctgctt 11262

                               
Query: 502   gttgttggagtttgcttg 519
             |||||||| |||||||||
Sbjct: 11261 gttgttggcgtttgcttg 11244



to top

>gb|AC189331.1| Brassica rapa subsp. pekinensis clone KBrB037O12, complete sequence
          Length = 109500

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 385   gctcggatgaacaaaaaagactcatggctgttctggtggactctttac 432
             |||||||||||||| |||||||| ||||| ||||||||||| ||||||
Sbjct: 10772 gctcggatgaacaagaaagactcgtggcttttctggtggacgctttac 10725



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 220   agcttcgtcatcatctttgtcatcaccgtgctccttgccgcgcttgacttctgggtggtg 279
             ||||| || |||||||||||  | || || || ||||| |||||||||||||||||||| 
Sbjct: 11023 agctttgtaatcatctttgtggtgactgttcttcttgcggcgcttgacttctgggtggtt 10964

                     
Query: 280   aagaatgt 287
             ||||||||
Sbjct: 10963 aagaatgt 10956



to top

>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence
          Length = 89397

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                         
Query: 463   atattttcactcattagacttgaagctgattaccttcttgttgttggagtttgcttgact 522
             ||||| |||||||| || ||| |||||||||| || |||||||| ||||||||  |||| 
Sbjct: 57271 atattctcactcataaggcttcaagctgattatctccttgttgtaggagtttgtctgacc 57212

                                                        
Query: 523   ctaagccttgcaaacatcgtggggttcaccaaatgcaacaaag 565
             || ||| ||||||| || || || || ||||||||||| ||||
Sbjct: 57211 cttagcattgcaaatattgttggttttaccaaatgcaaaaaag 57169



 Score = 58.0 bits (29), Expect = 6e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 385   gctcggatgaacaaaaaagactcatggctgttctggtggac 425
             |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 57991 gctcggatgaacaagaaggactcatggcttttctggtggac 57951



to top

>gb|BT028179.1| Gasterosteus aculeatus clone CNB149-F06 mRNA sequence
          Length = 997

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 301 ctggtcgggcttcgttggtggaatgagattgacga 335
           |||||||| || |||||||||||| ||||||||||
Sbjct: 378 ctggtcggcctgcgttggtggaatcagattgacga 412



to top

>emb|CT978684.2| Mouse DNA sequence from clone WI1-572B3 on chromosome 4, complete
             sequence
          Length = 40943

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 394   aacaaaaaagactcatggctgtt 416
             |||||||||||||||||||||||
Sbjct: 40824 aacaaaaaagactcatggctgtt 40802



to top

>emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chromosome 4, complete
              sequence
          Length = 193363

 Score = 46.1 bits (23), Expect = 0.23
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 394    aacaaaaaagactcatggctgtt 416
              |||||||||||||||||||||||
Sbjct: 135533 aacaaaaaagactcatggctgtt 135555



to top

>ref|XM_001077686.1| PREDICTED: Rattus norvegicus similar to Protein FAM18B (LOC687358),
           mRNA
          Length = 1742

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 264 tgacttctgggtggtgaagaatgtcagcggaaggatactggtcgggcttcgttggtggaa 323
           |||||| ||||  ||||||||||||| ||| ||  || ||||||| || |||||||||||
Sbjct: 347 tgacttttgggcagtgaagaatgtcaccggtagactaatggtcggcctacgttggtggaa 406

                             
Query: 324 tgagattgacgacgatgg 341
           | | || ||||| |||||
Sbjct: 407 tcatatcgacgaggatgg 424



to top

>dbj|AB222076.1| Lilium hybrid division I LHbHLH2 mRNA for bHLH transcription
           factor, complete cds
          Length = 2406

 Score = 44.1 bits (22), Expect = 0.91
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 223 ttcgtcatcatctttgtcatcaccgt 248
           |||||||||||| |||||||||||||
Sbjct: 891 ttcgtcatcatcattgtcatcaccgt 866



to top

>ref|XM_422322.2| PREDICTED: Gallus gallus polypyrimidine tract binding protein 2
            (PTBP2), mRNA
          Length = 3169

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 915  aatacaaaaggcctttttttt 935
            |||||||||||||||||||||
Sbjct: 2192 aatacaaaaggcctttttttt 2172



to top

>ref|XM_001077332.1| PREDICTED: Rattus norvegicus adenylate cyclase 9 (predicted)
            (Adcy9_predicted), mRNA
          Length = 6399

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 530  ttgcaaacatcgtggggttcaccaa 554
            ||||| |||||||||||||||||||
Sbjct: 1266 ttgcagacatcgtggggttcaccaa 1290



to top

>ref|XM_001062146.1| PREDICTED: Rattus norvegicus hypothetical LOC300207 (predicted)
           (RGD1305928_predicted), mRNA
          Length = 452

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 405 ctcatggctgttctggtggac 425
           |||||||||||||||||||||
Sbjct: 111 ctcatggctgttctggtggac 91



to top

>ref|XM_217031.3| PREDICTED: Rattus norvegicus hypothetical LOC300207 (predicted)
           (RGD1305928_predicted), mRNA
          Length = 584

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 405 ctcatggctgttctggtggac 425
           |||||||||||||||||||||
Sbjct: 243 ctcatggctgttctggtggac 223



to top

>gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome 13, complete sequence
          Length = 229672

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    ccaagggaagaagaaagaggc 64
             |||||||||||||||||||||
Sbjct: 97988 ccaagggaagaagaaagaggc 97968



to top

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 408     atggctgttctggtggactct 428
               |||||||||||||||||||||
Sbjct: 3807637 atggctgttctggtggactct 3807617



to top

>gb|AC108137.8| Homo sapiens chromosome 15, clone RP11-941F15, complete sequence
          Length = 177015

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 634   tcatccctgcagtcagcattc 654
             |||||||||||||||||||||
Sbjct: 78760 tcatccctgcagtcagcattc 78740



to top

>gb|AC002337.3| Arabidopsis thaliana chromosome 2 clone T8I13 map CIC06C03, complete
            sequence
          Length = 88068

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 500  ttgttgttggagtttgcttgactct 524
            ||||| |||||||||||||||||||
Sbjct: 5946 ttgttattggagtttgcttgactct 5970



to top

>emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on chromosome 9 Contains a
            transcription factor IIA small 12 kDa subunit (GTF2A2)
            pseudogene, complete sequence
          Length = 95922

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 558  caacaaagatgccaagaagaa 578
            |||||||||||||||||||||
Sbjct: 5382 caacaaagatgccaagaagaa 5402



to top

>gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, complete sequence
          Length = 162060

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 634    tcatccctgcagtcagcattc 654
              |||||||||||||||||||||
Sbjct: 142415 tcatccctgcagtcagcattc 142435



to top

>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence
          Length = 138426

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    tcgtcatcatctttgtcatca 244
              |||||||||||||||||||||
Sbjct: 122504 tcgtcatcatctttgtcatca 122524



to top

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 168     cttcaaggcgtcggcgctggc 188
               |||||||||||||||||||||
Sbjct: 1702890 cttcaaggcgtcggcgctggc 1702910



to top

>emb|CT009754.11| Mouse DNA sequence from clone RP23-5P19 on chromosome 13, complete
             sequence
          Length = 255133

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   tcgtcatcatctttgtcatca 244
             |||||||||||||||||||||
Sbjct: 27243 tcgtcatcatctttgtcatca 27263



to top

>emb|AL713861.10| Mouse DNA sequence from clone RP23-367H15 on chromosome X, complete
             sequence
          Length = 169838

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 700   ctgtgttaccttctgtcaaag 720
             |||||||||||||||||||||
Sbjct: 75851 ctgtgttaccttctgtcaaag 75831



to top

>emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chromosome 2, complete
              sequence
          Length = 164288

 Score = 42.1 bits (21), Expect = 3.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 223    ttcgtcatcatctttgtcatc 243
              |||||||||||||||||||||
Sbjct: 103963 ttcgtcatcatctttgtcatc 103943


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 186,163,749
Number of extensions: 9415917
Number of successful extensions: 260862
Number of sequences better than 10.0: 43
Number of HSP's gapped: 260854
Number of HSP's successfully gapped: 68
Length of query: 954
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 931
Effective length of database: 18,503,978,556
Effective search space: 17227204035636
Effective search space used: 17227204035636
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top