ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf59o03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072213.1| Oryza sativa (japonica cultivar-group) Os11g0134900 (Os11g0134900) mRNA, complete cds Length = 1875 Score = 323 bits (163), Expect = 1e-84 Identities = 316/367 (86%) Strand = Plus / Plus Query: 860 ggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccactag 919 |||||| || ||||||||||| ||| | ||||| |||||||||||||| || ||||| || Sbjct: 390 ggtcatattcaacactctgttcggattaagtgtgaagtattggatggcaatcgccacaag 449 Query: 920 aatgctgcttggttctctaaatggcatgcttgccccaataaaggcttattcagttgaagt 979 | | || |||||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 450 attccttcttggtgctctaaatggcatgctggccccaataaaggcttattccattgaagt 509 Query: 980 ctgtcgacctgaacatcatgctctaggattatcagttgtaagcacaggttggggcatagg 1039 ||||||||||||||||| ||||||||||||||| | |||||||| ||||||||| |||| Sbjct: 510 ttgtcgacctgaacatcaagctctaggattatcaatagtaagcactggttggggcgtagg 569 Query: 1040 tcttgttgtcggtccagccattggaggatacttagcgcagcctgcaaagcaatatccggg 1099 |||||||| ||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 570 gcttgttgtgggtccagccattggaggctactttgcacagcctgctaagcaatatccaaa 629 Query: 1100 cctattttccgagaagtcactttttgggaggtttccctatttgttgccgtgtctttttat 1159 ||||||||||||||||| | ||||||||||| || || || ||||| || |||| ||| Sbjct: 630 tgtattttccgagaagtcaatatttgggaggttcccatacttcttgccatgcctttgtat 689 Query: 1160 ttcactaatcgcatttgctgttctagtaagctgcatatggctaccggagacacttcatat 1219 ||||| || || ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 690 ctcactcattgctcttgttgttcttataagctgcatatggctaccggagacacttcataa 749 Query: 1220 gcataaa 1226 ||||||| Sbjct: 750 gcataaa 756 Score = 244 bits (123), Expect = 1e-60 Identities = 261/307 (85%) Strand = Plus / Plus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 |||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 824 agaagagtctctacaagaactggccattgatatcctctattattgcatattgtgttttca 883 Query: 1363 cccttcatgatacagcatatagtgagatattttccttgtgggctgtaagtgacaaaaagt 1422 ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | Sbjct: 884 cccttcatgatacagcatatagtgagatattttccttatgggctgtaagtgagaaaagat 943 Query: 1423 atggcggactaagcttttcatctaaagatgtcggccaagttcttgcagcttcaggtgctg 1482 |||| || |||| ||||| |||||||| || || ||||||||||||| | ||||||||| Sbjct: 944 atggtgggttaagtttttcgtctaaagaagttggtcaagttcttgcagttgcaggtgctg 1003 Query: 1483 gtcttcttttgtatcaaatacttgtgtatagatatgtccacaaatatcttgggtctatca 1542 |||| ||| ||||||| | | | ||||||| ||||| |||| |||||| || |||| Sbjct: 1004 gtctacttgtgtatcagcttttcatctatagatcggtccataaatttcttggatccatca 1063 Query: 1543 tttcatctcgtattgcagctgttctatccataccacttcttgctacataccccttcatga 1602 |||||||||||||||| | | | |||| ||||| |||| ||||| || ||||| |||| Sbjct: 1064 attcatctcgtattgcatcagctttatctgtaccaattctcgctacttatccctttatga 1123 Query: 1603 cacactt 1609 ||||||| Sbjct: 1124 cacactt 1130 Score = 147 bits (74), Expect = 2e-31 Identities = 173/206 (83%) Strand = Plus / Plus Query: 1716 tcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaag 1775 ||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1237 tcacaaagtcaaagaggtgctgcaaatggcatatctacgacggcaatgtcattcttcaag 1296 Query: 1776 gctattgctccagctggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgct 1835 || ||||||||||| |||||||| | ||||||| ||||||||| | |||||| ||| Sbjct: 1297 gcaattgctccagcaggagcaggagctctgttctcttgggcccaagaacgccaaaatgaa 1356 Query: 1836 gctttctttccaggggatcaaatgatatttctgattttgaatatagtcgaagtaattggg 1895 || ||||| |||||||||||||||||||| | ||| ||||| | | ||| ||||||| Sbjct: 1357 gccttcttcccaggggatcaaatgatattctttattctgaatgtgattgaattaattgga 1416 Query: 1896 cttgtgctaaccttcaagccattcct 1921 |||| | | ||||||||||| ||||| Sbjct: 1417 cttgcgttgaccttcaagccgttcct 1442 Score = 105 bits (53), Expect = 6e-19 Identities = 158/193 (81%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| |||||| || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 74 cggtgttctacgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 133 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccga 247 ||| ||||||||||||||||||| || ||| ||||||| ||||||| || | || | Sbjct: 134 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctcttctttaccaa 193 Query: 248 tatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaagaacg 307 |||| || ||||||| ||||| |||||||||||| |||| ||||||||||||| || | Sbjct: 194 tatcctcgttgttcccattcctctacttcatgatagaagatctgcatgtggcaaaaaagg 253 Query: 308 aacaagacattgg 320 ||||||| ||||| Sbjct: 254 aacaagatattgg 266 Score = 95.6 bits (48), Expect = 6e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 675 ggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcagat 734 ||||||||||| |||||||| |||||||||||||| || ||||||||||| || |||||| Sbjct: 286 ggtgcatcatatatgatcggtagatgttttgcctcactcttttggggtgtagttgcagat 345 Query: 735 cgtattgggagaaaacctatcatt 758 ||||| ||||| || ||||||||| Sbjct: 346 cgtatagggaggaagcctatcatt 369
>dbj|AK069533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019M18, full insert sequence Length = 1878 Score = 323 bits (163), Expect = 1e-84 Identities = 316/367 (86%) Strand = Plus / Plus Query: 860 ggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccactag 919 |||||| || ||||||||||| ||| | ||||| |||||||||||||| || ||||| || Sbjct: 393 ggtcatattcaacactctgttcggattaagtgtgaagtattggatggcaatcgccacaag 452 Query: 920 aatgctgcttggttctctaaatggcatgcttgccccaataaaggcttattcagttgaagt 979 | | || |||||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 453 attccttcttggtgctctaaatggcatgctggccccaataaaggcttattccattgaagt 512 Query: 980 ctgtcgacctgaacatcatgctctaggattatcagttgtaagcacaggttggggcatagg 1039 ||||||||||||||||| ||||||||||||||| | |||||||| ||||||||| |||| Sbjct: 513 ttgtcgacctgaacatcaagctctaggattatcaatagtaagcactggttggggcgtagg 572 Query: 1040 tcttgttgtcggtccagccattggaggatacttagcgcagcctgcaaagcaatatccggg 1099 |||||||| ||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 573 gcttgttgtgggtccagccattggaggctactttgcacagcctgctaagcaatatccaaa 632 Query: 1100 cctattttccgagaagtcactttttgggaggtttccctatttgttgccgtgtctttttat 1159 ||||||||||||||||| | ||||||||||| || || || ||||| || |||| ||| Sbjct: 633 tgtattttccgagaagtcaatatttgggaggttcccatacttcttgccatgcctttgtat 692 Query: 1160 ttcactaatcgcatttgctgttctagtaagctgcatatggctaccggagacacttcatat 1219 ||||| || || ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 693 ctcactcattgctcttgttgttcttataagctgcatatggctaccggagacacttcataa 752 Query: 1220 gcataaa 1226 ||||||| Sbjct: 753 gcataaa 759 Score = 244 bits (123), Expect = 1e-60 Identities = 261/307 (85%) Strand = Plus / Plus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 |||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 827 agaagagtctctacaagaactggccattgatatcctctattattgcatattgtgttttca 886 Query: 1363 cccttcatgatacagcatatagtgagatattttccttgtgggctgtaagtgacaaaaagt 1422 ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | Sbjct: 887 cccttcatgatacagcatatagtgagatattttccttatgggctgtaagtgagaaaagat 946 Query: 1423 atggcggactaagcttttcatctaaagatgtcggccaagttcttgcagcttcaggtgctg 1482 |||| || |||| ||||| |||||||| || || ||||||||||||| | ||||||||| Sbjct: 947 atggtgggttaagtttttcgtctaaagaagttggtcaagttcttgcagttgcaggtgctg 1006 Query: 1483 gtcttcttttgtatcaaatacttgtgtatagatatgtccacaaatatcttgggtctatca 1542 |||| ||| ||||||| | | | ||||||| ||||| |||| |||||| || |||| Sbjct: 1007 gtctacttgtgtatcagcttttcatctatagatcggtccataaatttcttggatccatca 1066 Query: 1543 tttcatctcgtattgcagctgttctatccataccacttcttgctacataccccttcatga 1602 |||||||||||||||| | | | |||| ||||| |||| ||||| || ||||| |||| Sbjct: 1067 attcatctcgtattgcatcagctttatctgtaccaattctcgctacttatccctttatga 1126 Query: 1603 cacactt 1609 ||||||| Sbjct: 1127 cacactt 1133 Score = 147 bits (74), Expect = 2e-31 Identities = 173/206 (83%) Strand = Plus / Plus Query: 1716 tcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaag 1775 ||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1240 tcacaaagtcaaagaggtgctgcaaatggcatatctacgacggcaatgtcattcttcaag 1299 Query: 1776 gctattgctccagctggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgct 1835 || ||||||||||| |||||||| | ||||||| ||||||||| | |||||| ||| Sbjct: 1300 gcaattgctccagcaggagcaggagctctgttctcttgggcccaagaacgccaaaatgaa 1359 Query: 1836 gctttctttccaggggatcaaatgatatttctgattttgaatatagtcgaagtaattggg 1895 || ||||| |||||||||||||||||||| | ||| ||||| | | ||| ||||||| Sbjct: 1360 gccttcttcccaggggatcaaatgatattctttattctgaatgtgattgaattaattgga 1419 Query: 1896 cttgtgctaaccttcaagccattcct 1921 |||| | | ||||||||||| ||||| Sbjct: 1420 cttgcgttgaccttcaagccgttcct 1445 Score = 105 bits (53), Expect = 6e-19 Identities = 158/193 (81%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| |||||| || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 77 cggtgttctacgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 136 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccga 247 ||| ||||||||||||||||||| || ||| ||||||| ||||||| || | || | Sbjct: 137 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctcttctttaccaa 196 Query: 248 tatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaagaacg 307 |||| || ||||||| ||||| |||||||||||| |||| ||||||||||||| || | Sbjct: 197 tatcctcgttgttcccattcctctacttcatgatagaagatctgcatgtggcaaaaaagg 256 Query: 308 aacaagacattgg 320 ||||||| ||||| Sbjct: 257 aacaagatattgg 269 Score = 95.6 bits (48), Expect = 6e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 675 ggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcagat 734 ||||||||||| |||||||| |||||||||||||| || ||||||||||| || |||||| Sbjct: 289 ggtgcatcatatatgatcggtagatgttttgcctcactcttttggggtgtagttgcagat 348 Query: 735 cgtattgggagaaaacctatcatt 758 ||||| ||||| || ||||||||| Sbjct: 349 cgtatagggaggaagcctatcatt 372
>emb|CT833630.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104P24, full insert sequence Length = 1878 Score = 311 bits (157), Expect = 6e-81 Identities = 317/369 (85%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 860 ggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccactag 919 |||||| || ||||||||||| ||| | |||||||||||||||||||| |||||||| || Sbjct: 432 ggtcatattcaacactctgttcggattaagtgtaaagtattggatggcaattgccacaag 491 Query: 920 aatgctgcttggttctctaaatggcatgcttgccccaataaaggcttattcagttgaagt 979 | | || |||||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 492 attccttcttggtgctctaaatggcatgctggccccaataaaggcttattccattgaagt 551 Query: 980 ctgtcgacctgaacatcatgctctaggattatcagttgtaagcacaggttggggcatagg 1039 ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||| Sbjct: 552 ttgtcgacctgaacatcaggctctaggattatcaatagtaagcactggttggggcatagg 611 Query: 1040 tcttgttgtcggtccagccattggaggatacttagcgcagcctgcaaagcaatatccggg 1099 |||||||| ||||||||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 612 gcttgttgtgggtccagccattggaggctactttgcaca-cctgctaagcaatatccaaa 670 Query: 1100 cctattttccgagaagtcactttttgggaggtttccctatttgttgccgtgtctttttat 1159 ||||||| ||||||||| | ||||||||||| || || || ||||| || ||| ||| Sbjct: 671 tgtattttctgagaagtcaatatttgggaggttcccatacttcttgccatgcatttgtat 730 Query: 1160 ttcactaatcgcatttgctgttctagtaagctgcatatggctaccggagacacttcatat 1219 ||| | || || ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 731 ctcattcattgctcttgttgttcttataagctgcatatggctaccggagacacttcataa 790 Query: 1220 gcataaaaa 1228 ||||||||| Sbjct: 791 gcataaaaa 799 Score = 248 bits (125), Expect = 7e-62 Identities = 251/293 (85%) Strand = Plus / Plus Query: 1317 aagaactggccattgatgtcttctataattgcatattgtgttttcacccttcatgataca 1376 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||| Sbjct: 879 aagaactggccattgatatcctctattattgcatactgtgttttcacccttcatgataca 938 Query: 1377 gcatatagtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagc 1436 ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| Sbjct: 939 gcatatagtgagatattttccttatgggctgtaagtgacaaaagatatggtggattaagt 998 Query: 1437 ttttcatctaaagatgtcggccaagttcttgcagcttcaggtgctggtcttcttttgtat 1496 ||||| |||||||| || || ||||||||||||| | ||||||||||||| ||| ||||| Sbjct: 999 ttttcgtctaaagaagttggtcaagttcttgcagttgcaggtgctggtctacttgtgtat 1058 Query: 1497 caaatacttgtgtatagatatgtccacaaatatcttgggtctatcatttcatctcgtatt 1556 || | | | ||||||| ||||| |||| |||||| || |||| ||||||||||||| Sbjct: 1059 cagcttttcatctatagattggtccataaatttcttggatccatcaattcatctcgtatt 1118 Query: 1557 gcagctgttctatccataccacttcttgctacataccccttcatgacacactt 1609 | | | | | ||||||||||| |||||||| | || ||||| ||||||||||| Sbjct: 1119 gtatcagctttatccataccaattcttgctccttatccctttatgacacactt 1171 Score = 89.7 bits (45), Expect = 4e-14 Identities = 156/193 (80%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| ||| || || |||||||||||||||||||| | ||| ||||| |||| | Sbjct: 117 cggtgttctatgatggctgccccggctgcgccatggaactgaagctggagagcagccaag 176 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccga 247 ||| ||||||||||||||||||| || ||| ||||||| ||||||| || | || | Sbjct: 177 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctcttctttaccaa 236 Query: 248 tatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaagaacg 307 |||| || ||||||| ||||| |||||||||||| ||||| | ||||||||||| || | Sbjct: 237 tatcctcgttgttcccattcctctacttcatgatagaagacctacatgtggcaaaaaagg 296 Query: 308 aacaagacattgg 320 ||||||| ||||| Sbjct: 297 aacaagatattgg 309 Score = 89.7 bits (45), Expect = 4e-14 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 675 ggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcagat 734 ||||||||||| |||||||| |||||||| ||||| || ||||||||||| || |||||| Sbjct: 329 ggtgcatcatatatgatcggtagatgttt-gcctcactcttttggggtgtagttgcagat 387 Query: 735 cgtattgggagaaaacctatcattg 759 ||||| ||||| ||||||||||||| Sbjct: 388 cgtatagggaggaaacctatcattg 412 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1803 ttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggggatcaaatgata 1862 |||||||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||| Sbjct: 1276 ttgttctcttgggcccaagaacgccaaaatgcagccttcttcccaggggatcaaatgata 1335 Query: 1863 tt 1864 || Sbjct: 1336 tt 1337
>emb|CT833631.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110E18, full insert sequence Length = 1654 Score = 291 bits (147), Expect = 5e-75 Identities = 292/339 (86%), Gaps = 1/339 (0%) Strand = Plus / Plus Query: 890 tgtaaagtattggatggctattgccactagaatgctgcttggttctctaaatggcatgct 949 |||||||||||||||||| |||||||| ||| | || |||||| |||||||||||||||| Sbjct: 437 tgtaaagtattggatggcaattgccacaagattccttcttggtgctctaaatggcatgct 496 Query: 950 tgccccaataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggatt 1009 |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 497 ggccccaataaaggcttattccattgaagtttgtcgacctgaacatcaggctctaggatt 556 Query: 1010 atcagttgtaagcacaggttggggcataggtcttgttgtcggtccagccattggaggata 1069 |||| | |||||||| |||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 557 atcaatagtaagcactggttggggcatagggcttgttgtgggtccagccattggaggcta 616 Query: 1070 cttagcgcagcctgcaaagcaatatccgggcctattttccgagaagtcactttttgggag 1129 ||| || || ||||| ||||||||||| ||||||| ||||||||| | |||||||| Sbjct: 617 ctttgcaca-cctgctaagcaatatccaaatgtattttctgagaagtcaatatttgggag 675 Query: 1130 gtttccctatttgttgccgtgtctttttatttcactaatcgcatttgctgttctagtaag 1189 ||| || || || ||||| || ||| ||| ||| | || || ||| |||||| |||| Sbjct: 676 gttcccatacttcttgccatgcatttgtatctcattcattgctcttgttgttcttataag 735 Query: 1190 ctgcatatggctaccggagacacttcatatgcataaaaa 1228 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 736 ctgcatatggctaccggagacacttcataagcataaaaa 774 Score = 220 bits (111), Expect = 2e-53 Identities = 251/295 (85%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 1317 aagaactggccattgatgtcttctataattgcatattgtgttttcacccttcatgataca 1376 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||| Sbjct: 854 aagaactggccattgatatcctctattattgcatactgtgttttcacccttcatgataca 913 Query: 1377 gcatatagtga-gatattttccttgtgggctgtaagtgacaaaaagtatggcggact-aa 1434 ||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||| | || Sbjct: 914 gcatatagtgaggatattttccttatgggctgtaagtgacaaaagatatggtggattaaa 973 Query: 1435 gcttttcatctaaagatgtcggccaagttcttgcagcttcaggtgctggtcttcttttgt 1494 | ||||| |||||||| || || ||||||||||||| | ||||||||||||| ||| ||| Sbjct: 974 gtttttcgtctaaagaagttggtcaagttcttgcagttgcaggtgctggtctacttgtgt 1033 Query: 1495 atcaaatacttgtgtatagatatgtccacaaatatcttgggtctatcatttcatctcgta 1554 |||| | | | ||||||| ||||| |||| |||||| || |||| ||||||||||| Sbjct: 1034 atcagcttttcatctatagattggtccataaatttcttggatccatcaattcatctcgta 1093 Query: 1555 ttgcagctgttctatccataccacttcttgctacataccccttcatgacacactt 1609 ||| | | | | ||||||||||| |||||||| | || ||||| ||||||||||| Sbjct: 1094 ttgtatcagctttatccataccaattcttgctccttatccctttatgacacactt 1148 Score = 89.7 bits (45), Expect = 4e-14 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 675 ggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcagat 734 ||||||||||| |||||||| |||||||| ||||| || ||||||||||| || |||||| Sbjct: 334 ggtgcatcatatatgatcggtagatgttt-gcctcactcttttggggtgtagttgcagat 392 Query: 735 cgtattgggagaaaacctatcattg 759 ||||| ||||| ||||||||||||| Sbjct: 393 cgtatagggaggaaacctatcattg 417 Score = 81.8 bits (41), Expect = 9e-12 Identities = 155/193 (80%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| ||| || || |||||||||||||||||||| | ||| ||||| |||| | Sbjct: 122 cggtgttctatgatggctgccccggctgcgccatggaactgaagctggagagcagccaag 181 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccga 247 ||| ||||||||||||||||||| || ||| ||||||| ||||||| || | || | Sbjct: 182 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctcttctttaccaa 241 Query: 248 tatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaagaacg 307 |||| || ||||||| |||| |||||||||||| ||||| | ||||||||||| || | Sbjct: 242 tatcctcgttgttcccattcccctacttcatgatagaagacctacatgtggcaaaaaagg 301 Query: 308 aacaagacattgg 320 ||||||| ||||| Sbjct: 302 aacaagatattgg 314 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 1803 ttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggggatcaaatgata 1862 |||||||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||| Sbjct: 1253 ttgttctcttgggcccaagaacgccaaaatgcagccttcttcccaggggatcaaatgata 1312 Query: 1863 tt 1864 || Sbjct: 1313 tt 1314
>ref|NM_001072614.1| Oryza sativa (japonica cultivar-group) Os12g0132500 (Os12g0132500) mRNA, complete cds Length = 1149 Score = 280 bits (141), Expect = 2e-71 Identities = 240/273 (87%) Strand = Plus / Plus Query: 859 gggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccacta 918 ||||||| || ||||||||||| ||| | |||||||||||||||||||| |||||||| | Sbjct: 212 gggtcatattcaacactctgttcggattaagtgtaaagtattggatggcaattgccacaa 271 Query: 919 gaatgctgcttggttctctaaatggcatgcttgccccaataaaggcttattcagttgaag 978 || | || |||||| |||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 gattccttcttggtgctctaaatggcatgctggccccaataaaggcttattccattgaag 331 Query: 979 tctgtcgacctgaacatcatgctctaggattatcagttgtaagcacaggttggggcatag 1038 | ||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||||| Sbjct: 332 tttgtcgacctgaacatcaggctctaggattatcaatagtaagcactggttggggcatag 391 Query: 1039 gtcttgttgtcggtccagccattggaggatacttagcgcagcctgcaaagcaatatccgg 1098 | |||||||| ||||||||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 392 ggcttgttgtgggtccagccattggaggctactttgcacagcctgctaagcaatatccaa 451 Query: 1099 gcctattttccgagaagtcactttttgggaggt 1131 ||||||| ||||||||| | |||||||||| Sbjct: 452 atgtattttctgagaagtcaatatttgggaggt 484 Score = 260 bits (131), Expect = 2e-65 Identities = 263/307 (85%) Strand = Plus / Plus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 ||||||| || || ||||||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 584 agaagagcctctacaagaactggccattgatatcctctattattgcatactgtgttttca 643 Query: 1363 cccttcatgatacagcatatagtgagatattttccttgtgggctgtaagtgacaaaaagt 1422 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 644 cccttcatgatacagcatatagtgagatattttccttatgggctgtaagtgacaaaagat 703 Query: 1423 atggcggactaagcttttcatctaaagatgtcggccaagttcttgcagcttcaggtgctg 1482 |||| ||| |||| ||||| |||||||| || || ||||||||||||| | ||||||||| Sbjct: 704 atggtggattaagtttttcgtctaaagaagttggtcaagttcttgcagttgcaggtgctg 763 Query: 1483 gtcttcttttgtatcaaatacttgtgtatagatatgtccacaaatatcttgggtctatca 1542 |||| ||| ||||||| | | | ||||||| ||||| |||| |||||| || |||| Sbjct: 764 gtctacttgtgtatcagcttttcatctatagatcggtccataaatttcttggatccatca 823 Query: 1543 tttcatctcgtattgcagctgttctatccataccacttcttgctacataccccttcatga 1602 |||||||||||||||| | | | ||||||||||| |||||||| | || ||||| |||| Sbjct: 824 attcatctcgtattgcatcagctttatccataccaattcttgctgcttatccctttatga 883 Query: 1603 cacactt 1609 ||||||| Sbjct: 884 cacactt 890 Score = 145 bits (73), Expect = 8e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1716 tcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaag 1775 ||||||| ||||||||||||||||||||| ||||||| ||| |||||||| |||||||| Sbjct: 952 tcacaaagtcaaagaggtgctgcaaatggcatatctatgacagcaatgtcattcttcaag 1011 Query: 1776 gctattgctccagctggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgct 1835 || ||||||||||| |||||||| | ||||||| ||||||||| | |||||| |||| Sbjct: 1012 gcaattgctccagcaggagcaggagctctgttctcttgggcccaagaacgccaaaatgca 1071 Query: 1836 gctttctttccaggggatcaaatgatatt 1864 || ||||| |||||||||||||||||||| Sbjct: 1072 gccttcttcccaggggatcaaatgatatt 1100 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| ||| || || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 41 cggtgttctatgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 100 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctc 236 ||| ||||||||||||||||||| || ||| ||||||| ||||||| Sbjct: 101 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctc 149
>emb|CT828163.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083J18, full insert sequence Length = 2003 Score = 151 bits (76), Expect = 1e-32 Identities = 130/148 (87%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 1224 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 1283 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 |||||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 1284 agtgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1343 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 1344 tctaaagatgttgggcaagttcttgcag 1371 Score = 71.9 bits (36), Expect = 9e-09 Identities = 174/220 (79%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 790 tgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctc 849 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| ||||||||||| || || | ||||| || ||| ||||||||| Sbjct: 850 tgaatggattgcttgcaccaataaaggcgtactctatcgaagtttgccgagctgaacatc 909 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | || | || ||||| |||| ||||||| ||||| ||||||||||| || || |||| Sbjct: 910 aacctttgggcctatcaattgtgagcacagcatgggggataggtcttgtagttggcccag 969 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | | ||| |||||| | || ||||||| || |||||||| Sbjct: 970 caactgggggatacctcgcacagcctgtcaaacaatatcc 1009 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 1580 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 1639 Query: 1791 ggagcagg 1798 || ||||| Sbjct: 1640 ggggcagg 1647 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggag 177 ||||||| |||| || ||||||||||||||||||||||| | ||||||| Sbjct: 127 ggtgtaccacgatggctgccccggctgcgccatggagcggaggaaggag 175 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 1099 taagctgtatatggctaccggagaccctacataagcataaa 1139 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tgttccccttcctgtacttcatg 279 ||||||||||||||||||||||| Sbjct: 386 tgttccccttcctgtacttcatg 408 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 711 tggggtatggtggcagatcgtattgg 736
>dbj|AK241552.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065177A21, full insert sequence Length = 1788 Score = 151 bits (76), Expect = 1e-32 Identities = 130/148 (87%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 939 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 998 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 |||||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 999 agtgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1058 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 1059 tctaaagatgttgggcaagttcttgcag 1086 Score = 79.8 bits (40), Expect = 4e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacggg 188 ||||||| |||| || |||||||||||||||||||||| | ||||||| | || ||| Sbjct: 173 ggtgtaccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaaggg 232 Query: 189 cacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccgat 248 || ||||||| ||||||| ||| ||| | ||||||| | |||||| ||||||| || Sbjct: 233 cattccctacagggagttcctcttcgttgccatcaccaccctcgcctcctctctgccaat 292 Query: 249 atcatcactgttccccttcctgtacttcatgatacaagacatgcatgt 296 || || |||||||||||||||||||||||||| |||| ||||||| Sbjct: 293 ctcttccttgttccccttcctgtacttcatgataagagacttgcatgt 340 Score = 71.9 bits (36), Expect = 9e-09 Identities = 174/220 (79%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 505 tgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctc 564 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| ||||||||||| || || | ||||| || ||| ||||||||| Sbjct: 565 tgaatggattgcttgcaccaataaaggcgtactctatcgaagtttgccgagctgaacatc 624 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | || | || ||||| |||| ||||||| ||||| ||||||||||| || || |||| Sbjct: 625 aacctttgggcctatcaattgtgagcacagcatgggggataggtcttgtagttggcccag 684 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | | ||| |||||| | || ||||||| || |||||||| Sbjct: 685 caactgggggatacctcgcacagcctgtcaaacaatatcc 724 Score = 65.9 bits (33), Expect = 6e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 1347 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 1406 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || ||||| || | || || ||||| |||||| | ||||||| || || |||||||| Sbjct: 1407 ggggcaggagttatattttcttgggcacaaaagagacaacatgtggcattttttccaggt 1466 Query: 1851 gatcaaatgatatttct 1867 || || ||| ||||||| Sbjct: 1467 gaccagatggtatttct 1483 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 814 taagctgtatatggctaccggagaccctacataagcataaa 854 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 426 tggggtatggtggcagatcgtattgg 451
>ref|NM_001072616.1| Oryza sativa (japonica cultivar-group) Os12g0132800 (Os12g0132800) mRNA, complete cds Length = 1816 Score = 151 bits (76), Expect = 1e-32 Identities = 130/148 (87%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 967 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 1026 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 |||||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 1027 agtgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1086 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 1087 tctaaagatgttgggcaagttcttgcag 1114 Score = 79.8 bits (40), Expect = 4e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacggg 188 ||||||| |||| || |||||||||||||||||||||| | ||||||| | || ||| Sbjct: 201 ggtgtaccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaaggg 260 Query: 189 cacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccgat 248 || ||||||| ||||||| ||| ||| | ||||||| | |||||| ||||||| || Sbjct: 261 cattccctacagggagttcctcttcgttgccatcaccaccctcgcctcctctctgccaat 320 Query: 249 atcatcactgttccccttcctgtacttcatgatacaagacatgcatgt 296 || || |||||||||||||||||||||||||| |||| ||||||| Sbjct: 321 ctcttccttgttccccttcctgtacttcatgataagagacttgcatgt 368 Score = 71.9 bits (36), Expect = 9e-09 Identities = 174/220 (79%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 533 tgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctc 592 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| ||||||||||| || || | ||||| || ||| ||||||||| Sbjct: 593 tgaatggattgcttgcaccaataaaggcgtactctatcgaagtttgccgagctgaacatc 652 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | || | || ||||| |||| ||||||| ||||| ||||||||||| || || |||| Sbjct: 653 aacctttgggcctatcaattgtgagcacagcatgggggataggtcttgtagttggcccag 712 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | | ||| |||||| | || ||||||| || |||||||| Sbjct: 713 caactgggggatacctcgcacagcctgtcaaacaatatcc 752 Score = 65.9 bits (33), Expect = 6e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 1375 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 1434 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || ||||| || | || || ||||| |||||| | ||||||| || || |||||||| Sbjct: 1435 ggggcaggagttatattttcttgggcacaaaagagacaacatgtggcattttttccaggt 1494 Query: 1851 gatcaaatgatatttct 1867 || || ||| ||||||| Sbjct: 1495 gaccagatggtatttct 1511 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 842 taagctgtatatggctaccggagaccctacataagcataaa 882 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 454 tggggtatggtggcagatcgtattgg 479
>gb|AF543419.1| Oryza sativa (japonica cultivar-group) major facilitator superfamily antiporter (mfs2) mRNA, complete cds Length = 1845 Score = 151 bits (76), Expect = 1e-32 Identities = 130/148 (87%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 967 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 1026 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 |||||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 1027 agtgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1086 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 1087 tctaaagatgttgggcaagttcttgcag 1114 Score = 87.7 bits (44), Expect = 2e-13 Identities = 137/168 (81%) Strand = Plus / Plus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacggg 188 ||||||| |||| || ||||||||||||||||||||||| | ||||||| | || ||| Sbjct: 201 ggtgtaccacgatggctgccccggctgcgccatggagcggaggaaggaggagcacaaggg 260 Query: 189 cacgccctacaaggagttcttctacgtcggggtcaccacttttgcctccgctctgccgat 248 || ||||||| ||||||| ||| ||| | ||||||| | |||||| ||||||| || Sbjct: 261 cattccctacagggagttcctcttcgttgccatcaccaccctcgcctcctctctgccaat 320 Query: 249 atcatcactgttccccttcctgtacttcatgatacaagacatgcatgt 296 || || |||||||||||||||||||||||||| |||| ||||||| Sbjct: 321 ctcttccttgttccccttcctgtacttcatgataagagacttgcatgt 368 Score = 71.9 bits (36), Expect = 9e-09 Identities = 174/220 (79%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 533 tgtttggattaagtgtgaagtactggatggctgttaccacaagatttcttcttggtgctc 592 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| ||||||||||| || || | ||||| || ||| ||||||||| Sbjct: 593 tgaatggattgcttgcaccaataaaggcgtactctatcgaagtttgccgagctgaacatc 652 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | || | || ||||| |||| ||||||| ||||| ||||||||||| || || |||| Sbjct: 653 aacctttgggcctatcaattgtgagcacagcatgggggataggtcttgtagttggcccag 712 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | | ||| |||||| | || ||||||| || |||||||| Sbjct: 713 caactgggggatacctcgcacagcctgtcaaacaatatcc 752 Score = 65.9 bits (33), Expect = 6e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 1375 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 1434 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || ||||| || | || || ||||| |||||| | ||||||| || || |||||||| Sbjct: 1435 ggggcaggagttatattttcttgggcacaaaagagacaacatgtggcattttttccaggt 1494 Query: 1851 gatcaaatgatatttct 1867 || || ||| ||||||| Sbjct: 1495 gaccagatggtatttct 1511 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 842 taagctgtatatggctaccggagaccctacataagcataaa 882 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 454 tggggtatggtggcagatcgtattgg 479
>ref|NM_001072214.1| Oryza sativa (japonica cultivar-group) Os11g0135000 (Os11g0135000) mRNA, complete cds Length = 1851 Score = 135 bits (68), Expect = 7e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| || |||||||||| ||| ||||||| || || |||||| Sbjct: 975 tggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatat 1034 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 || ||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 1035 agcgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1094 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 1095 tctaaagatgttgggcaagttcttgcag 1122 Score = 119 bits (60), Expect = 4e-23 Identities = 180/220 (81%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 541 tgtttggattaagtgtgaagtactggatggctgttaccacgagattccttcttggtgctc 600 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| |||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 601 tgaatggattgcttgcaccaataaaggcttactctatcgaagtttgccgagctgaacatc 660 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | ||||| || ||||| |||| ||||||| ||||| ||||||||||| || ||||||| Sbjct: 661 aagctctgggcctatcaattgtgagcacagcatggggaataggtcttgtagttggtccag 720 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | |||||||| ||| | |||||||||| || |||||||| Sbjct: 721 caattggaggctacctcgcgcagcctgtcaaacaatatcc 760 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 ||||||||||| |||||| |||| || || |||||| | ||||||||| |||| |||||| Sbjct: 1383 ggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagct 1442 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || |||||||| | ||||| ||||| |||||||| || ||||| || || |||||||| Sbjct: 1443 ggcgcaggtgttctattctcttgggcacaaaagcgacagcatgcagcattttttccaggt 1502 Query: 1851 gatca 1855 ||||| Sbjct: 1503 gatca 1507 Score = 67.9 bits (34), Expect = 1e-07 Identities = 112/138 (81%) Strand = Plus / Plus Query: 145 tgccccggctgcgccatggagcgcaagaaggagaacagcacgggcacgccctacaaggag 204 |||||||||||||||||||||| | ||||||| | || ||||| |||||||||||| Sbjct: 225 tgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggag 284 Query: 205 ttcttctacgtcggggtcaccacttttgcctccgctctgccgatatcatcactgttcccc 264 ||| ||| ||| | ||||||| | |||||| ||||||| || || || |||||||| Sbjct: 285 ttcctcttcgttgccatcaccaccctcgcctcctctctgccaatctcttccttgttcccc 344 Query: 265 ttcctgtacttcatgata 282 ||| |||||||||||||| Sbjct: 345 ttcttgtacttcatgata 362 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 850 taagctgtatatggctaccggagaccctacataagcataaa 890
>dbj|AK066565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072J11, full insert sequence Length = 1343 Score = 135 bits (68), Expect = 7e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| || |||||||||| ||| ||||||| || || |||||| Sbjct: 487 tggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatat 546 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 || ||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 547 agcgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 606 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 ||||||||||| || ||||||||||||| Sbjct: 607 tctaaagatgttgggcaagttcttgcag 634 Score = 119 bits (60), Expect = 4e-23 Identities = 180/220 (81%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 53 tgtttggattaagtgtgaagtactggatggctgttaccacgagattccttcttggtgctc 112 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| |||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 113 tgaatggattgcttgcaccaataaaggcttactctatcgaagtttgccgagctgaacatc 172 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | ||||| || ||||| |||| ||||||| ||||| ||||||||||| || ||||||| Sbjct: 173 aagctctgggcctatcaattgtgagcacagcatggggaataggtcttgtagttggtccag 232 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | |||||||| ||| | |||||||||| || |||||||| Sbjct: 233 caattggaggctacctcgcgcagcctgtcaaacaatatcc 272 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 ||||||||||| |||||| |||| || || |||||| | ||||||||| |||| |||||| Sbjct: 895 ggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagct 954 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || |||||||| | ||||| ||||| |||||||| || ||||| || || |||||||| Sbjct: 955 ggcgcaggtgttctattctcttgggcacaaaagcgacagcatgcagcattttttccaggt 1014 Query: 1851 gatca 1855 ||||| Sbjct: 1015 gatca 1019 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 362 taagctgtatatggctaccggagaccctacataagcataaa 402
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 131 bits (66), Expect = 1e-26 Identities = 81/86 (94%) Strand = Plus / Minus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 |||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 137024 agaagagtctctacaagaactggccattgatatcctctattattgcatattgtgttttca 136965 Query: 1363 cccttcatgatacagcatatagtgag 1388 |||||||||||||||||||||||||| Sbjct: 136964 cccttcatgatacagcatatagtgag 136939 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Minus Query: 1715 gtcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaa 1774 |||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 135328 gtcacaaagtcaaagaggtgctgcaaatggcatatctacgacggcaatgtcattcttcaa 135269 Query: 1775 ggctattgctccagctggagcagg 1798 ||| ||||||||||| |||||||| Sbjct: 135268 ggcaattgctccagcaggagcagg 135245 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccact 917 |||||||| || ||||||||||| ||| | ||||| |||||||||||||| || ||||| Sbjct: 138329 agggtcatattcaacactctgttcggattaagtgtgaagtattggatggcaatcgccaca 138270 Query: 918 agaatgctgcttggttctctaaatggcatgcttgccccaataaagg 963 ||| | || |||||| |||||||||||||||| ||||||||||||| Sbjct: 138269 agattccttcttggtgctctaaatggcatgctggccccaataaagg 138224 Score = 99.6 bits (50), Expect = 4e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 673 taggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcag 732 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| || |||| Sbjct: 138512 taggtgcatcatatatgatcggtagatgttttgcctcactcttttggggtgtagttgcag 138453 Query: 733 atcgtattgggagaaaacctatcatt 758 ||||||| ||||| || ||||||||| Sbjct: 138452 atcgtatagggaggaagcctatcatt 138427 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 |||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||||||| Sbjct: 144495 agatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatcta 144436 Query: 1447 aagatgtcggccaagttcttgcag 1470 ||||||| || ||||||||||||| Sbjct: 144435 aagatgttgggcaagttcttgcag 144412 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 961 aggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatca 1013 |||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 138128 aggcttattccattgaagtttgtcgacctgaacatcaagctctaggattatca 138076 Score = 71.9 bits (36), Expect = 9e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 ||||||||||||| |||||||||||||| |||| ||||| || |||| ||||| |||| Sbjct: 136827 agatattttccttatgggctgtaagtgagaaaagatatggtgggttaagtttttcgtcta 136768 Query: 1447 aagatgtcggccaagttcttgcag 1470 |||| || || ||||||||||||| Sbjct: 136767 aagaagttggtcaagttcttgcag 136744 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggaggatactt 1072 |||||||| ||||||||| |||| |||||||| ||||||||||||||||| ||||| Sbjct: 137990 gtaagcactggttggggcgtagggcttgttgtgggtccagccattggaggctactt 137935 Score = 65.9 bits (33), Expect = 6e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| |||||| || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 139722 cggtgttctacgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 139663 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctc 236 ||| ||||||||||||||||||| || ||| ||||||| ||||||| Sbjct: 139662 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctc 139614 Score = 65.9 bits (33), Expect = 6e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 674 aggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcaga 733 |||||| ||||||||| |||| |||| |||||| || | ||||||||||| |||||||| Sbjct: 160153 aggtgcttcatacatggtcggtagatcctttgccgcgatcttttggggtgttgtggcaga 160094 Query: 734 tcgtattgggagaaaacctatcatt 758 |||||| || || |||||| ||||| Sbjct: 160093 tcgtataggaaggaaacctgtcatt 160069 Score = 61.9 bits (31), Expect = 9e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 ||||||||||| |||||| |||| || || |||||| | ||||||||| |||| |||||| Sbjct: 143399 ggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagct 143340 Query: 1791 ggagcaggtgt 1801 || |||||||| Sbjct: 143339 ggcgcaggtgt 143329 Score = 56.0 bits (28), Expect = 5e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 1395 tccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatctaaagatgtc 1454 |||||||||||||| ||||| | ||| ||||| || || |||||||||||| | ||| | Sbjct: 158534 tccttgtgggctgtgagtgatagaaaatatggtggccttagcttttcatctgaggatatt 158475 Query: 1455 ggccaagttcttgcagcttcaggt 1478 || ||||||||||| ||| ||||| Sbjct: 158474 ggtcaagttcttgctgctgcaggt 158451 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1318 agaactggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacag 1377 |||| ||||||| ||||||| |||| ||| |||||||| |||| |||||||| |||| Sbjct: 158817 agaattggccatggatgtctactatgatttcatattgtttttttggtcttcatgacacag 158758 Query: 1378 catatagtgag 1388 ||||||||||| Sbjct: 158757 catatagtgag 158747 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Minus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| || |||||||||| ||| ||||||| || || |||||| Sbjct: 144876 tggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatat 144817 Query: 1383 ag 1384 || Sbjct: 144816 ag 144815 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggc 907 |||||||| |||||||| || |||||||| ||| ||||||||||||||| Sbjct: 159972 agggtcatatttaacacactatttggactaagtacaaagtattggatggc 159923 Score = 48.1 bits (24), Expect = 0.13 Identities = 51/60 (85%) Strand = Plus / Minus Query: 1020 agcacaggttggggcataggtcttgttgtcggtccagccattggaggatacttagcgcag 1079 ||||||| ||||| ||||||||||| || |||||||| |||||||| ||| | |||||| Sbjct: 145630 agcacagcatggggaataggtcttgtagttggtccagcaattggaggctacctcgcgcag 145571 Score = 46.1 bits (23), Expect = 0.52 Identities = 44/51 (86%) Strand = Plus / Minus Query: 1509 tatagatatgtccacaaatatcttgggtctatcatttcatctcgtattgca 1559 ||||||| ||||| |||| |||||| || |||| |||||||||||||||| Sbjct: 136227 tatagatcggtccataaatttcttggatccatcaattcatctcgtattgca 136177 Score = 46.1 bits (23), Expect = 0.52 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1077 cagcctgcaaagcaatatccgggcctattttccgagaagtcactttttgggaggt 1131 |||||||| ||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 137844 cagcctgctaagcaatatccaaatgtattttccgagaagtcaatatttgggaggt 137790 Score = 46.1 bits (23), Expect = 0.52 Identities = 53/63 (84%) Strand = Plus / Minus Query: 145 tgccccggctgcgccatggagcgcaagaaggagaacagcacgggcacgccctacaaggag 204 |||||||||||||||||||||| | ||||||| | || ||||| |||||||||||| Sbjct: 147004 tgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggag 146945 Query: 205 ttc 207 ||| Sbjct: 146944 ttc 146942 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1186 taagctgcatatggctaccgg 1206 ||||||||||||||||||||| Sbjct: 137639 taagctgcatatggctaccgg 137619
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 131 bits (66), Expect = 1e-26 Identities = 81/86 (94%) Strand = Plus / Minus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 |||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 1622488 agaagagtctctacaagaactggccattgatatcctctattattgcatattgtgttttca 1622429 Query: 1363 cccttcatgatacagcatatagtgag 1388 |||||||||||||||||||||||||| Sbjct: 1622428 cccttcatgatacagcatatagtgag 1622403 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Minus Query: 1715 gtcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaa 1774 |||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 1620792 gtcacaaagtcaaagaggtgctgcaaatggcatatctacgacggcaatgtcattcttcaa 1620733 Query: 1775 ggctattgctccagctggagcagg 1798 ||| ||||||||||| |||||||| Sbjct: 1620732 ggcaattgctccagcaggagcagg 1620709 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccact 917 |||||||| || ||||||||||| ||| | ||||| |||||||||||||| || ||||| Sbjct: 1623793 agggtcatattcaacactctgttcggattaagtgtgaagtattggatggcaatcgccaca 1623734 Query: 918 agaatgctgcttggttctctaaatggcatgcttgccccaataaagg 963 ||| | || |||||| |||||||||||||||| ||||||||||||| Sbjct: 1623733 agattccttcttggtgctctaaatggcatgctggccccaataaagg 1623688 Score = 99.6 bits (50), Expect = 4e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 673 taggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcag 732 ||||||||||||| |||||||| |||||||||||||| || ||||||||||| || |||| Sbjct: 1623976 taggtgcatcatatatgatcggtagatgttttgcctcactcttttggggtgtagttgcag 1623917 Query: 733 atcgtattgggagaaaacctatcatt 758 ||||||| ||||| || ||||||||| Sbjct: 1623916 atcgtatagggaggaagcctatcatt 1623891 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 |||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||||||| Sbjct: 1629959 agatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatcta 1629900 Query: 1447 aagatgtcggccaagttcttgcag 1470 ||||||| || ||||||||||||| Sbjct: 1629899 aagatgttgggcaagttcttgcag 1629876 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 961 aggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatca 1013 |||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1623592 aggcttattccattgaagtttgtcgacctgaacatcaagctctaggattatca 1623540 Score = 71.9 bits (36), Expect = 9e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 ||||||||||||| |||||||||||||| |||| ||||| || |||| ||||| |||| Sbjct: 1622291 agatattttccttatgggctgtaagtgagaaaagatatggtgggttaagtttttcgtcta 1622232 Query: 1447 aagatgtcggccaagttcttgcag 1470 |||| || || ||||||||||||| Sbjct: 1622231 aagaagttggtcaagttcttgcag 1622208 Score = 71.9 bits (36), Expect = 9e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggaggatactt 1072 |||||||| ||||||||| |||| |||||||| ||||||||||||||||| ||||| Sbjct: 1623454 gtaagcactggttggggcgtagggcttgttgtgggtccagccattggaggctactt 1623399 Score = 65.9 bits (33), Expect = 6e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| |||||| || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 1625186 cggtgttctacgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 1625127 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctc 236 ||| ||||||||||||||||||| || ||| ||||||| ||||||| Sbjct: 1625126 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctc 1625078 Score = 65.9 bits (33), Expect = 6e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 674 aggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcaga 733 |||||| ||||||||| |||| |||| |||||| || | ||||||||||| |||||||| Sbjct: 1645617 aggtgcttcatacatggtcggtagatcctttgccgcgatcttttggggtgttgtggcaga 1645558 Query: 734 tcgtattgggagaaaacctatcatt 758 |||||| || || |||||| ||||| Sbjct: 1645557 tcgtataggaaggaaacctgtcatt 1645533 Score = 61.9 bits (31), Expect = 9e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 ||||||||||| |||||| |||| || || |||||| | ||||||||| |||| |||||| Sbjct: 1628863 ggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagct 1628804 Query: 1791 ggagcaggtgt 1801 || |||||||| Sbjct: 1628803 ggcgcaggtgt 1628793 Score = 56.0 bits (28), Expect = 5e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 1395 tccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatctaaagatgtc 1454 |||||||||||||| ||||| | ||| ||||| || || |||||||||||| | ||| | Sbjct: 1643998 tccttgtgggctgtgagtgatagaaaatatggtggccttagcttttcatctgaggatatt 1643939 Query: 1455 ggccaagttcttgcagcttcaggt 1478 || ||||||||||| ||| ||||| Sbjct: 1643938 ggtcaagttcttgctgctgcaggt 1643915 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1318 agaactggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacag 1377 |||| ||||||| ||||||| |||| ||| |||||||| |||| |||||||| |||| Sbjct: 1644281 agaattggccatggatgtctactatgatttcatattgtttttttggtcttcatgacacag 1644222 Query: 1378 catatagtgag 1388 ||||||||||| Sbjct: 1644221 catatagtgag 1644211 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Minus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| || |||||||||| ||| ||||||| || || |||||| Sbjct: 1630340 tggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatat 1630281 Query: 1383 ag 1384 || Sbjct: 1630280 ag 1630279 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggc 907 |||||||| |||||||| || |||||||| ||| ||||||||||||||| Sbjct: 1645436 agggtcatatttaacacactatttggactaagtacaaagtattggatggc 1645387 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 atatcatcactgttccccttcctgtacttcatg 279 ||||||||| ||||||||||| ||||||||||| Sbjct: 1664904 atatcatcattgttccccttcttgtacttcatg 1664872 Score = 48.1 bits (24), Expect = 0.13 Identities = 51/60 (85%) Strand = Plus / Minus Query: 1020 agcacaggttggggcataggtcttgttgtcggtccagccattggaggatacttagcgcag 1079 ||||||| ||||| ||||||||||| || |||||||| |||||||| ||| | |||||| Sbjct: 1631094 agcacagcatggggaataggtcttgtagttggtccagcaattggaggctacctcgcgcag 1631035 Score = 46.1 bits (23), Expect = 0.52 Identities = 44/51 (86%) Strand = Plus / Minus Query: 1509 tatagatatgtccacaaatatcttgggtctatcatttcatctcgtattgca 1559 ||||||| ||||| |||| |||||| || |||| |||||||||||||||| Sbjct: 1621691 tatagatcggtccataaatttcttggatccatcaattcatctcgtattgca 1621641 Score = 46.1 bits (23), Expect = 0.52 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1077 cagcctgcaaagcaatatccgggcctattttccgagaagtcactttttgggaggt 1131 |||||||| ||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 1623308 cagcctgctaagcaatatccaaatgtattttccgagaagtcaatatttgggaggt 1623254 Score = 46.1 bits (23), Expect = 0.52 Identities = 53/63 (84%) Strand = Plus / Minus Query: 145 tgccccggctgcgccatggagcgcaagaaggagaacagcacgggcacgccctacaaggag 204 |||||||||||||||||||||| | ||||||| | || ||||| |||||||||||| Sbjct: 1632468 tgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggag 1632409 Query: 205 ttc 207 ||| Sbjct: 1632408 ttc 1632406 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 805575 aagaagagtctatataagaac 805595 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1186 taagctgcatatggctaccgg 1206 ||||||||||||||||||||| Sbjct: 1623103 taagctgcatatggctaccgg 1623083
>dbj|AK121911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P18, full insert sequence Length = 1855 Score = 127 bits (64), Expect = 2e-25 Identities = 127/148 (85%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| || |||||||||| ||| ||||||| || || |||||| Sbjct: 979 tggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatat 1038 Query: 1383 agtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttca 1442 || ||||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||| Sbjct: 1039 agcgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttca 1098 Query: 1443 tctaaagatgtcggccaagttcttgcag 1470 |||||||||| || ||||||||||||| Sbjct: 1099 tctaaagatggtgggcaagttcttgcag 1126 Score = 119 bits (60), Expect = 4e-23 Identities = 180/220 (81%) Strand = Plus / Plus Query: 877 tgtttggactgagtgtaaagtattggatggctattgccactagaatgctgcttggttctc 936 |||||||| | ||||| ||||| ||||||||| || |||| ||| | || |||||| ||| Sbjct: 545 tgtttggattaagtgtgaagtactggatggctgttaccacgagattccttcttggtgctc 604 Query: 937 taaatggcatgcttgccccaataaaggcttattcagttgaagtctgtcgacctgaacatc 996 | ||||| ||||||| |||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 605 tgaatggattgcttgcaccaataaaggcttactctatcgaagtttgccgagctgaacatc 664 Query: 997 atgctctaggattatcagttgtaagcacaggttggggcataggtcttgttgtcggtccag 1056 | ||||| || ||||| |||| ||||||| ||||| ||||||||||| || ||||||| Sbjct: 665 aagctctgggcctatcaattgtgagcacagcatggggaataggtcttgtagttggtccag 724 Query: 1057 ccattggaggatacttagcgcagcctgcaaagcaatatcc 1096 | |||||||| ||| | |||||||||| || |||||||| Sbjct: 725 caattggaggctacctcgcgcagcctgtcaaacaatatcc 764 Score = 81.8 bits (41), Expect = 9e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 ||||||||||| |||||| |||| || || |||||| | ||||||||| |||| |||||| Sbjct: 1387 ggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagct 1446 Query: 1791 ggagcaggtgtcttgttctcatgggcccaaaagcgccaacatgctgctttctttccaggg 1850 || |||||||| | ||||| ||||| |||||||| || ||||| || || |||||||| Sbjct: 1447 ggcgcaggtgttctattctcttgggcacaaaagcgacagcatgcagcattttttccaggt 1506 Query: 1851 gatca 1855 ||||| Sbjct: 1507 gatca 1511 Score = 67.9 bits (34), Expect = 1e-07 Identities = 112/138 (81%) Strand = Plus / Plus Query: 145 tgccccggctgcgccatggagcgcaagaaggagaacagcacgggcacgccctacaaggag 204 |||||||||||||||||||||| | ||||||| | || ||||| |||||||||||| Sbjct: 229 tgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggag 288 Query: 205 ttcttctacgtcggggtcaccacttttgcctccgctctgccgatatcatcactgttcccc 264 ||| ||| ||| | ||||||| | |||||| ||||||| || || || |||||||| Sbjct: 289 ttcctcttcgttgccatcaccaccctcgcctcctctctgccaatctcttccttgttcccc 348 Query: 265 ttcctgtacttcatgata 282 ||| |||||||||||||| Sbjct: 349 ttcttgtacttcatgata 366 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccggagacacttcatatgcataaa 1226 ||||||| ||||||||||||||||| || |||| ||||||| Sbjct: 854 taagctgtatatggctaccggagaccctacataagcataaa 894
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 115 bits (58), Expect = 7e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 ||||||| || || ||||||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1569256 agaagagcctctacaagaactggccattgatatcctctattattgcatactgtgttttca 1569197 Query: 1363 cccttcatgatacagcatatagtgag 1388 |||||||||||||||||||||||||| Sbjct: 1569196 cccttcatgatacagcatatagtgag 1569171 Score = 115 bits (58), Expect = 7e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccact 917 |||||||| || ||||||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 1570537 agggtcatattcaacactctgttcggattaagtgtaaagtattggatggcaattgccaca 1570478 Query: 918 agaatgctgcttggttctctaaatggcatgcttgccccaataaagg 963 ||| | || |||||| |||||||||||||||| ||||||||||||| Sbjct: 1570477 agattccttcttggtgctctaaatggcatgctggccccaataaagg 1570432 Score = 103 bits (52), Expect = 3e-18 Identities = 76/84 (90%) Strand = Plus / Minus Query: 1715 gtcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaa 1774 |||||||| ||||||||||||||||||||| ||||||| ||| |||||||| ||||||| Sbjct: 1567577 gtcacaaagtcaaagaggtgctgcaaatggcatatctatgacagcaatgtcattcttcaa 1567518 Query: 1775 ggctattgctccagctggagcagg 1798 ||| ||||||||||| |||||||| Sbjct: 1567517 ggcaattgctccagcaggagcagg 1567494 Score = 93.7 bits (47), Expect = 2e-15 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 673 taggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcag 732 ||||||||||||| |||||||| |||||||| ||||| || ||||||||||| || |||| Sbjct: 1570719 taggtgcatcatatatgatcggtagatgttt-gcctcactcttttggggtgtagttgcag 1570661 Query: 733 atcgtattgggagaaaacctatcattg 759 ||||||| ||||| ||||||||||||| Sbjct: 1570660 atcgtatagggaggaaacctatcattg 1570634 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 ||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||||| |||| Sbjct: 1569058 agatattttccttatgggctgtaagtgacaaaagatatggtggattaagtttttcgtcta 1568999 Query: 1447 aagatgtcggccaagttcttgcag 1470 |||| || || ||||||||||||| Sbjct: 1568998 aagaagttggtcaagttcttgcag 1568975 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 |||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||||||| Sbjct: 1585474 agatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatcta 1585415 Query: 1447 aagatgtcggccaagttcttgcag 1470 ||||||| || ||||||||||||| Sbjct: 1585414 aagatgttgggcaagttcttgcag 1585391 Score = 79.8 bits (40), Expect = 4e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggaggatactt 1072 |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 1570202 gtaagcactggttggggcatagggcttgttgtgggtccagccattggaggctactt 1570147 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 961 aggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatca 1013 |||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1570340 aggcttattccattgaagtttgtcgacctgaacatcaggctctaggattatca 1570288 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Minus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 1586035 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 1585976 Query: 1383 agtgag 1388 |||||| Sbjct: 1585975 agtgag 1585970 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 1584358 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 1584299 Query: 1791 ggagcagg 1798 || ||||| Sbjct: 1584298 ggggcagg 1584291 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Minus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| ||| || || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 1571355 cggtgttctatgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 1571296 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctc 236 ||| ||||||||||||||||||| || ||| ||||||| ||||||| Sbjct: 1571295 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctc 1571247 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatct 1445 ||||||| |||||||||||||| ||||| | ||| ||||| || || |||||||||||| Sbjct: 1595961 agatattatccttgtgggctgtgagtgatagaaaatatggtggccttagcttttcatct 1595903 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagc 166 ||||||| |||| || |||||||||||||||||||||| Sbjct: 1587910 ggtgtaccacgatggctgccccggctgcgccatggagc 1587873 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 atatcatcactgttccccttcctgtacttcatg 279 ||||||||| ||||||||||| ||||||||||| Sbjct: 1610042 atatcatcattgttccccttcttgtacttcatg 1610010 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1567 tatccataccacttcttgctacataccccttcatgacacactt 1609 ||||||||||| |||||||| | || ||||| ||||||||||| Sbjct: 1568322 tatccataccaattcttgctgcttatccctttatgacacactt 1568280 Score = 46.1 bits (23), Expect = 0.52 Identities = 44/51 (86%) Strand = Plus / Minus Query: 1509 tatagatatgtccacaaatatcttgggtctatcatttcatctcgtattgca 1559 ||||||| ||||| |||| |||||| || |||| |||||||||||||||| Sbjct: 1568469 tatagatcggtccataaatttcttggatccatcaattcatctcgtattgca 1568419 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 tgttccccttcctgtacttcatg 279 ||||||||||||||||||||||| Sbjct: 1587651 tgttccccttcctgtacttcatg 1587629 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 1587326 tggggtatggtggcagatcgtattgg 1587301 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Minus Query: 714 ttttggggtgtggtggcagatcgtattgggagaaaacctatcattg 759 |||||||| || |||||||||||||| || || |||||| |||||| Sbjct: 1597401 ttttggggagttgtggcagatcgtataggaaggaaacctgtcattg 1597356 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 1338957 aagaagagtctatataagaac 1338977 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1186 taagctgcatatggctaccgg 1206 ||||||||||||||||||||| Sbjct: 1569863 taagctgcatatggctaccgg 1569843 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 535 attttgagacggtgggagtactcagctag 563 |||||| ||||| |||||||||||||||| Sbjct: 19661128 attttgggacggagggagtactcagctag 19661156
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 115 bits (58), Expect = 7e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccact 917 |||||||| || ||||||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 55195 agggtcatattcaacactctgttcggattaagtgtaaagtattggatggcaattgccaca 55254 Query: 918 agaatgctgcttggttctctaaatggcatgcttgccccaataaagg 963 ||| | || |||||| |||||||||||||||| ||||||||||||| Sbjct: 55255 agattccttcttggtgctctaaatggcatgctggccccaataaagg 55300 Score = 115 bits (58), Expect = 7e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 1303 agaagagtctatataagaactggccattgatgtcttctataattgcatattgtgttttca 1362 ||||||| || || ||||||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 56476 agaagagcctctacaagaactggccattgatatcctctattattgcatactgtgttttca 56535 Query: 1363 cccttcatgatacagcatatagtgag 1388 |||||||||||||||||||||||||| Sbjct: 56536 cccttcatgatacagcatatagtgag 56561 Score = 103 bits (52), Expect = 3e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 1715 gtcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaa 1774 |||||||| ||||||||||||||||||||| ||||||| ||| |||||||| ||||||| Sbjct: 58155 gtcacaaagtcaaagaggtgctgcaaatggcatatctatgacagcaatgtcattcttcaa 58214 Query: 1775 ggctattgctccagctggagcagg 1798 ||| ||||||||||| |||||||| Sbjct: 58215 ggcaattgctccagcaggagcagg 58238 Score = 93.7 bits (47), Expect = 2e-15 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 673 taggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcag 732 ||||||||||||| |||||||| |||||||| ||||| || ||||||||||| || |||| Sbjct: 55013 taggtgcatcatatatgatcggtagatgttt-gcctcactcttttggggtgtagttgcag 55071 Query: 733 atcgtattgggagaaaacctatcattg 759 ||||||| ||||| ||||||||||||| Sbjct: 55072 atcgtatagggaggaaacctatcattg 55098 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 |||||||||| ||||| |||||||||| | ||| ||||| ||||| ||||||||||||| Sbjct: 40258 agatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatcta 40317 Query: 1447 aagatgtcggccaagttcttgcag 1470 ||||||| || ||||||||||||| Sbjct: 40318 aagatgttgggcaagttcttgcag 40341 Score = 87.7 bits (44), Expect = 2e-13 Identities = 74/84 (88%) Strand = Plus / Plus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 ||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||||| |||| Sbjct: 56674 agatattttccttatgggctgtaagtgacaaaagatatggtggattaagtttttcgtcta 56733 Query: 1447 aagatgtcggccaagttcttgcag 1470 |||| || || ||||||||||||| Sbjct: 56734 aagaagttggtcaagttcttgcag 56757 Score = 79.8 bits (40), Expect = 4e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggaggatactt 1072 |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 55530 gtaagcactggttggggcatagggcttgttgtgggtccagccattggaggctactt 55585 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 961 aggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatca 1013 |||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 55392 aggcttattccattgaagtttgtcgacctgaacatcaggctctaggattatca 55444 Score = 67.9 bits (34), Expect = 1e-07 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1323 tggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatat 1382 |||||||||||||| ||||| | |||||||||| ||| |||||||||| ||||||||| Sbjct: 39697 tggccattgatgtcatctattgtcacatattgtgtgttctcccttcatgacacagcatat 39756 Query: 1383 agtgag 1388 |||||| Sbjct: 39757 agtgag 39762 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 1731 ggtgctgcaaatggaatatctacgactgcaatgtccctcttcaaggctattgctccagct 1790 |||||||||||||||||| | || || || |||||| | ||||||||||||||||| ||| Sbjct: 41374 ggtgctgcaaatggaatagccacaacagccatgtccttgttcaaggctattgctccggct 41433 Query: 1791 ggagcagg 1798 || ||||| Sbjct: 41434 ggggcagg 41441 Score = 58.0 bits (29), Expect = 1e-04 Identities = 89/109 (81%) Strand = Plus / Plus Query: 128 cggtgtactacgaggggtgccccggctgcgccatggagcgcaagaaggagaacagcacgg 187 |||||| ||| || || |||||||||||||||||||| || ||| ||||| |||| | Sbjct: 54377 cggtgttctatgatggctgccccggctgcgccatggaacggaagctggagagcagccaag 54436 Query: 188 gcacgccctacaaggagttcttctacgtcggggtcaccacttttgcctc 236 ||| ||||||||||||||||||| || ||| ||||||| ||||||| Sbjct: 54437 gcatcccctacaaggagttcttctttgttgggatcaccaccattgcctc 54485 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatct 1445 ||||||| |||||||||||||| ||||| | ||| ||||| || || |||||||||||| Sbjct: 29771 agatattatccttgtgggctgtgagtgatagaaaatatggtggccttagcttttcatct 29829 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 129 ggtgtactacgaggggtgccccggctgcgccatggagc 166 ||||||| |||| || |||||||||||||||||||||| Sbjct: 37822 ggtgtaccacgatggctgccccggctgcgccatggagc 37859 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatg 279 ||||||||| ||||||||||| ||||||||||| Sbjct: 15690 atatcatcattgttccccttcttgtacttcatg 15722 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 tgttccccttcctgtacttcatg 279 ||||||||||||||||||||||| Sbjct: 38081 tgttccccttcctgtacttcatg 38103 Score = 46.1 bits (23), Expect = 0.52 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1509 tatagatatgtccacaaatatcttgggtctatcatttcatctcgtattgca 1559 ||||||| ||||| |||| |||||| || |||| |||||||||||||||| Sbjct: 57263 tatagatcggtccataaatttcttggatccatcaattcatctcgtattgca 57313 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1567 tatccataccacttcttgctacataccccttcatgacacactt 1609 ||||||||||| |||||||| | || ||||| ||||||||||| Sbjct: 57410 tatccataccaattcttgctgcttatccctttatgacacactt 57452 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 714 ttttggggtgtggtggcagatcgtattgggagaaaacctatcattg 759 |||||||| || |||||||||||||| || || |||||| |||||| Sbjct: 28331 ttttggggagttgtggcagatcgtataggaaggaaacctgtcattg 28376 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 717 tggggtgtggtggcagatcgtattgg 742 |||||| ||||||||||||||||||| Sbjct: 38406 tggggtatggtggcagatcgtattgg 38431 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1186 taagctgcatatggctaccgg 1206 ||||||||||||||||||||| Sbjct: 55869 taagctgcatatggctaccgg 55889
>emb|CT832667.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110M09, full insert sequence Length = 1107 Score = 111 bits (56), Expect = 1e-20 Identities = 77/84 (91%) Strand = Plus / Plus Query: 1715 gtcacaaaatcaaagaggtgctgcaaatggaatatctacgactgcaatgtccctcttcaa 1774 |||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||| Sbjct: 478 gtcacaaagtcaaagaggtgctgcaaatggcatatctacgacggcaatgtcattcttcaa 537 Query: 1775 ggctattgctccagctggagcagg 1798 ||| ||||||||||| |||||||| Sbjct: 538 ggcaattgctccagcaggagcagg 561 Score = 58.0 bits (29), Expect = 1e-04 Identities = 95/117 (81%) Strand = Plus / Plus Query: 1805 gttctcatgggcccaaaagcgccaacatgctgctttctttccaggggatcaaatgatatt 1864 |||||| ||||||||| | |||||| ||| || ||||| |||||||||||||||||||| Sbjct: 819 gttctcttgggcccaagaacgccaaaatgaagccttcttcccaggggatcaaatgatatt 878 Query: 1865 tctgattttgaatatagtcgaagtaattgggcttgtgctaaccttcaagccattcct 1921 | ||| ||||| | | ||| ||||||| |||| | | ||||||||||| ||||| Sbjct: 879 ctttattctgaatgtgattgaattaattggacttgcgttgaccttcaagccgttcct 935
>ref|NM_001072215.1| Oryza sativa (japonica cultivar-group) Os11g0135300 (Os11g0135300) mRNA, complete cds Length = 1275 Score = 109 bits (55), Expect = 4e-20 Identities = 136/163 (83%) Strand = Plus / Plus Query: 1318 agaactggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacag 1377 |||| ||||||| ||||||| |||| ||| |||||||| |||| |||||||| |||| Sbjct: 638 agaattggccatggatgtctactatgatttcatattgtttttttggtcttcatgacacag 697 Query: 1378 catatagtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagct 1437 |||||||||||||| | |||||||||||||| ||||| | ||| ||||| || || |||| Sbjct: 698 catatagtgagatactatccttgtgggctgtgagtgatagaaaatatggtggccttagct 757 Query: 1438 tttcatctaaagatgtcggccaagttcttgcagcttcaggtgc 1480 |||||||| | ||| | || ||||||||||| ||| ||||||| Sbjct: 758 tttcatctgaggatattggtcaagttcttgctgctgcaggtgc 800 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Plus Query: 675 ggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcagat 734 ||||| ||||||||| |||| |||| |||||| || | ||||||||||| ||||||||| Sbjct: 136 ggtgcttcatacatggtcggtagatcctttgccgcgatcttttggggtgttgtggcagat 195 Query: 735 cgtattgggagaaaacctatcatt 758 ||||| || || |||||| ||||| Sbjct: 196 cgtataggaaggaaacctgtcatt 219 Score = 48.1 bits (24), Expect = 0.13 Identities = 42/48 (87%) Strand = Plus / Plus Query: 860 ggtcatctttaacactctgtttggactgagtgtaaagtattggatggc 907 |||||| |||||||| || |||||||| ||| ||||||||||||||| Sbjct: 240 ggtcatatttaacacactatttggactaagtacaaagtattggatggc 287
>emb|AJ704455.1| Hordeum vulgare partial eIF(iso)4E gene for putative eukaryotic translation initiation factor (iso)4E, exons 3-5, line OWB-D Length = 1412 Score = 107 bits (54), Expect = 2e-19 Identities = 109/127 (85%), Gaps = 4/127 (3%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| ||||||||||||||||| |||||||||||||| |||| |||||||||| | Sbjct: 476 ctccgtcccaaaattcttgtcttacatttgtctagatatgaatg----tatctagtcacg 531 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtg 548 ||||||||||| |||| || |||| || | |||| |||||||||||||||| ||||| | Sbjct: 532 ttttagtattttgatacatctatttctaaacaaacttaagacaagaattttgggacggag 591 Query: 549 ggagtac 555 ||||||| Sbjct: 592 ggagtac 598 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 525 taagacaagaattttgagacggtgggagta 554 |||||||||||||||| ||||| ||||||| Sbjct: 499 taagacaagaattttgggacggagggagta 470
>ref|NM_001072617.1| Oryza sativa (japonica cultivar-group) Os12g0133000 (Os12g0133000) mRNA, complete cds Length = 1398 Score = 99.6 bits (50), Expect = 4e-17 Identities = 137/166 (82%) Strand = Plus / Plus Query: 1324 ggccattgatgtcttctataattgcatattgtgttttcacccttcatgatacagcatata 1383 |||||| ||||||| |||| ||| |||||||| |||| |||||||| |||||||| | Sbjct: 782 ggccatggatgtctactatgatttcatattgtttttttggtcttcatgacacagcataca 841 Query: 1384 gtgagatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcat 1443 |||||||||| |||||||||||||| ||||| | ||| ||||| || || |||||||||| Sbjct: 842 gtgagatattatccttgtgggctgtgagtgatagaaaatatggtggccttagcttttcat 901 Query: 1444 ctaaagatgtcggccaagttcttgcagcttcaggtgctggtcttct 1489 || | ||| | || || |||||||| | | |||||||| ||||||| Sbjct: 902 ctgaggatattggtcaggttcttgctgttgcaggtgctagtcttct 947 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 714 ttttggggtgtggtggcagatcgtattgggagaaaacctatcattg 759 |||||||| || |||||||||||||| || || |||||| |||||| Sbjct: 313 ttttggggagttgtggcagatcgtataggaaggaaacctgtcattg 358
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 474 atgtatctagtcatgttttagtatttggatatattcatttttagaaaaacctaagacaag 533 ||||||||||||| ||||||||||| |||| ||||||||||||| ||||||| |||||| Sbjct: 29685 atgtatctagtcacgttttagtattaagatacattcatttttagataaacctaggacaag 29626 Query: 534 aattttgagacggtgggagta 554 |||||||||| || ||||||| Sbjct: 29625 aattttgagatggagggagta 29605 Score = 73.8 bits (37), Expect = 2e-09 Identities = 104/126 (82%), Gaps = 4/126 (3%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| |||||||| ||||||||||||||| ||||| ||| ||||||||||||| | Sbjct: 222796 ctccgtcccaaaattattgtcttagatttgtttagat----atgaatgtatctagtcaag 222851 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtg 548 |||||||| || |||| || |||| || | ||| |||||||||||||||| |||| | Sbjct: 222852 ttttagtaattagatacatctatttctaaacaaagttaagacaagaattttgggacgaag 222911 Query: 549 ggagta 554 |||||| Sbjct: 222912 ggagta 222917
>gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu 1 beta-amylase (Bmy1) gene, intron III Length = 1087 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 173 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 118 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 117 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 67 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 67 aaaattcttgtcttagctttgtctaga 93
>gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva beta-amylase (Bmy1) gene, intron III Length = 1083 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 173 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 118 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 117 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 67 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 67 aaaattcttgtcttagctttgtctaga 93
>gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 173 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 118 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 117 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 67 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 67 aaaattcttgtcttagctttgtctaga 93
>gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainieris beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 173 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 118 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 117 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 67 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 67 aaaattcttgtcttagctttgtctaga 93
>gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 173 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 118 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 117 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 67 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 67 aaaattcttgtcttagctttgtctaga 93
>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene, complete cds Length = 5126 Score = 91.7 bits (46), Expect = 1e-14 Identities = 95/111 (85%), Gaps = 4/111 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| | | Sbjct: 2722 ctccgtttcaaaattcttgtcttagatttgtttagat----atgaatgtatctagttaag 2667 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaatttt 539 ||||||||||| |||| || |||| |||| ||| |||||||||||||||| Sbjct: 2666 ttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 2616 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctaga 464 |||||||||||||||| |||||||||| Sbjct: 2616 aaaattcttgtcttagctttgtctaga 2642
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 87.7 bits (44), Expect = 2e-13 Identities = 105/125 (84%), Gaps = 4/125 (3%) Strand = Plus / Minus Query: 430 tccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatgt 489 ||||| ||||||||||||||||| ||||||||| |||| |||| |||||||||||| Sbjct: 46712 tccgtcccaaaattcttgtcttaaatttgtctatatatgaatg----tatctagtcatgg 46657 Query: 490 tttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtgg 549 |||||||||| |||| || ||| | |||| || ||||||||||||||||| |||| || Sbjct: 46656 tttagtatttagatacatccatgtgtagacaatgctaagacaagaattttggaacggagg 46597 Query: 550 gagta 554 ||||| Sbjct: 46596 gagta 46592 Score = 52.0 bits (26), Expect = 0.008 Identities = 32/34 (94%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtcta 462 ||||||||||||||||||||||||| ||||||| Sbjct: 46598 ctccgttccaaaattcttgtcttagcattgtcta 46631
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 81.8 bits (41), Expect = 9e-12 Identities = 88/102 (86%), Gaps = 5/102 (4%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||| Sbjct: 30463 ctccgtcccaaaattcttgtcttagatttgtc----tatatatggatgtatctagtcata 30518 Query: 489 ttttagtatttggatatat-tcatttttagaaaaacctaaga 529 ||||||||| | |||| || |||||| |||| |||||||||| Sbjct: 30519 ttttagtatatagatacatctcatttctagacaaacctaaga 30560 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Minus Query: 515 tagaaaaacctaagacaagaattttgagacggtgggagta 554 |||| ||| ||||||||||||||||| ||||| ||||||| Sbjct: 30496 tagacaaatctaagacaagaattttgggacggagggagta 30457
>gb|DQ175899.1| Hordeum vulgare subsp. vulgare clone 28-36A-RB flanking T-DNA insertion sequence Length = 246 Score = 75.8 bits (38), Expect = 6e-10 Identities = 78/91 (85%), Gaps = 4/91 (4%) Strand = Plus / Minus Query: 437 caaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatgttttagta 496 |||||||||||||||| |||||| ||||||| |||| ||||||||||| |||||||| Sbjct: 110 caaaattcttgtcttacatttgtttagatatgaatg----tatctagtcatattttagta 55 Query: 497 tttggatatattcatttttagaaaaacctaa 527 ||| |||| |||||||| || | |||||||| Sbjct: 54 tttagatacattcatttctaaacaaacctaa 24 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 525 taagacaagaattttgagacggtgggagtact 556 |||||||||||||||||||||| ||||||||| Sbjct: 95 taagacaagaattttgagacggagggagtact 126
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 69.9 bits (35), Expect = 4e-08 Identities = 106/128 (82%), Gaps = 5/128 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| ||||||||||||||||||| ||||||| ||| | ||||||| ||||||| Sbjct: 7375 ctccgtcccaaaattcttgtcttagaattgtctaaatac----ggatgtatcaagtcatg 7320 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtg 548 |||||||||| | ||| || | | | |||| ||| ||||||||||||||||| ||| | | Sbjct: 7319 ttttagtattag-atacatccgtatctagacaaatctaagacaagaattttgggaccgag 7261 Query: 549 ggagtact 556 |||||||| Sbjct: 7260 ggagtact 7253 Score = 61.9 bits (31), Expect = 9e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 436 ccaaaattcttgtcttagatttgtctagata 466 ||||||||||||||||||||||||||||||| Sbjct: 7268 ccaaaattcttgtcttagatttgtctagata 7298 Score = 46.1 bits (23), Expect = 0.52 Identities = 29/31 (93%) Strand = Plus / Plus Query: 524 ctaagacaagaattttgagacggtgggagta 554 ||||||||||||||||| ||||| ||||||| Sbjct: 7351 ctaagacaagaattttgggacggagggagta 7381
>gb|DQ871219.1| Triticum turgidum subsp. dicoccoides clones BAC 409D13 and BAC 916O17, complete sequence Length = 245486 Score = 67.9 bits (34), Expect = 1e-07 Identities = 105/127 (82%), Gaps = 5/127 (3%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| ||||||||||||||||||||||||| || ||| | ||||||| ||||| | Sbjct: 236257 ctccgtcccaaaattcttgtcttagatttgtc----taaaaacggatgtatcaagtcacg 236202 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtg 548 |||||||| || |||| || | | | |||| || ||||||||||||||||| ||||| | Sbjct: 236201 ttttagta-ttagatacatccgtatctagacgaatctaagacaagaattttgggacggag 236143 Query: 549 ggagtac 555 ||||||| Sbjct: 236142 ggagtac 236136 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 |||||| ||||||||||||||||||||| ||||||||| Sbjct: 236143 ctccgtcccaaaattcttgtcttagattcgtctagata 236180 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 511 tttttagaaaaacctaagacaagaattttgagacggtgggagtac 555 |||||||| ||| ||||||||||||||||| ||||| |||||||| Sbjct: 236220 tttttagacaaatctaagacaagaattttgggacggagggagtac 236264
>ref|NM_001072618.1| Oryza sativa (japonica cultivar-group) Os12g0133100 (Os12g0133100) mRNA, partial cds Length = 2460 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 1071 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 1130 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| || ||||||| || |||||||||||| | ||||| | ||| ||| || Sbjct: 1131 ataaaggcctatgcaattgaagtttgccgacctgaacatgaagctcttgcattgtcactt 1190 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || ||||||| ||||| ||||||||| | | |||||||| |||||||| Sbjct: 1191 gttagcacagcatggggaataggtcttatcattggtccagctattggagg 1240 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 837 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 892
>gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds Length = 1489 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 |||||||||||||||||||||||||||||| ||||||| Sbjct: 497 ctccgttccaaaattcttgtcttagatttgcctagata 534 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtcta 462 |||||| ||||||||||||||||||||||||||| Sbjct: 611 ctccgtcccaaaattcttgtcttagatttgtcta 578 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 513 tttagaaaaacctaagacaagaattttgagacggtgggagtac 555 |||||| ||| ||||||||||||||||| ||||| |||||||| Sbjct: 576 tttagacaaatctaagacaagaattttgggacggagggagtac 618
>gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds Length = 1536 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 |||||||||||||||||||||||||||||| ||||||| Sbjct: 546 ctccgttccaaaattcttgtcttagatttgcctagata 583 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtcta 462 |||||| ||||||||||||||||||||||||||| Sbjct: 660 ctccgtcccaaaattcttgtcttagatttgtcta 627 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 513 tttagaaaaacctaagacaagaattttgagacggtgggagtac 555 |||||| ||| ||||||||||||||||| ||||| |||||||| Sbjct: 625 tttagacaaatctaagacaagaattttgggacggagggagtac 667
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 67.9 bits (34), Expect = 1e-07 Identities = 104/126 (82%), Gaps = 5/126 (3%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatgcatgtatctagtcatg 488 |||||| |||||||||||||| |||||||||||| || | | ||||||||||||||| Sbjct: 1066 ctccgtcccaaaattcttgtcatagatttgtctaaat----acggatgtatctagtcatg 1121 Query: 489 ttttagtatttggatatattcatttttagaaaaacctaagacaagaattttgagacggtg 548 ||||||| || || | |||||| | || | ||| ||||||| ||||||||| ||||| | Sbjct: 1122 ttttagt-gttagacacattcatatctaaacaaatctaagacnagaattttgggacggag 1180 Query: 549 ggagta 554 |||||| Sbjct: 1181 ggagta 1186 Score = 58.0 bits (29), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagatataaatg 472 |||||| |||||||||| ||||||||||||| ||||||| |||| Sbjct: 1180 ctccgtcccaaaattctngtcttagatttgtttagatatgaatg 1137 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Minus Query: 513 tttagaaaaacctaagacaagaattttgagacggtgggagta 554 |||||| ||| ||| ||||||||||||| ||||| ||||||| Sbjct: 1101 tttagacaaatctatgacaagaattttgggacggagggagta 1060
>dbj|AK100888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K07, full insert sequence Length = 2465 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 1076 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 1135 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| || ||||||| || |||||||||||| | ||||| | ||| ||| || Sbjct: 1136 ataaaggcctatgcaattgaagtttgccgacctgaacatgaagctcttgcattgtcactt 1195 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || ||||||| ||||| ||||||||| | | |||||||| |||||||| Sbjct: 1196 gttagcacagcatggggaataggtcttatcattggtccagctattggagg 1245 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 842 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 897
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 65.9 bits (33), Expect = 6e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 674 aggtgcatcatacatgatcggcagatgttttgcctcgctgttttggggtgtggtggcaga 733 |||||| ||||||||| |||| |||| |||||| || | ||||||||||| |||||||| Sbjct: 1331 aggtgcttcatacatggtcggtagatcctttgccgcgatcttttggggtgttgtggcaga 1272 Query: 734 tcgtattgggagaaaacctatcatt 758 |||||| || || |||||| ||||| Sbjct: 1271 tcgtataggaaggaaacctgtcatt 1247 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Minus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggc 907 |||||||| |||||||| || |||||||| ||| ||||||||||||||| Sbjct: 1150 agggtcatatttaacacactatttggactaagtacaaagtattggatggc 1101 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 atatcatcactgttccccttcctgtacttcatg 279 ||||||||| ||||||||||| ||||||||||| Sbjct: 19912 atatcatcattgttccccttcttgtacttcatg 19880
>ref|NM_001072221.1| Oryza sativa (japonica cultivar-group) Os11g0136400 (Os11g0136400) mRNA, complete cds Length = 1284 Score = 63.9 bits (32), Expect = 2e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 1760 aatgtccctcttcaaggctattgctccagctggagcaggtgtcttgttctcatgggccca 1819 ||||||| |||||||||| |||||||||| |||||||| | |||| || ||||| || Sbjct: 1101 aatgtccttcttcaaggcatttgctccagcaggagcaggcattctgttttcgtgggcaca 1160 Query: 1820 aaagcgccaacatgctgctttctttccaggggatcaaatg 1859 ||| ||||||||||| |||||||||||| || |||||| Sbjct: 1161 aaaacgccaacatgcatttttctttccaggtgaccaaatg 1200
>ref|NM_001072217.1| Oryza sativa (japonica cultivar-group) Os11g0135900 (Os11g0135900) mRNA, complete cds Length = 2186 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 505 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 560 Score = 44.1 bits (22), Expect = 2.1 Identities = 133/170 (78%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 739 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 798 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| | ||||||| || |||||||||||| | ||||| | ||| ||| || Sbjct: 799 ataaaggcctatgctattgaagtttgccgacctgaacatgaagctcttgcattgtcactt 858 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || || || | ||||| ||||||||| | | |||||||| |||||||| Sbjct: 859 gttagtacggcatggggaataggtcttataattggtccagctattggagg 908
>dbj|AK102718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105E18, full insert sequence Length = 2159 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 425 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 480 Score = 60.0 bits (30), Expect = 3e-05 Identities = 135/170 (79%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 659 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 718 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| || ||||||| || |||||||||||| | ||||| | || ||| || Sbjct: 719 ataaaggcctatgcaattgaagtttgccgacctgaacatgaagctcttgcatagtcactt 778 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || ||||||| ||||| ||||||||| | | |||||||| |||||||| Sbjct: 779 gttagcacagcatggggaataggtcttatcattggtccagctattggagg 828
>dbj|AK072447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109G16, full insert sequence Length = 3019 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 478 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 533 Score = 44.1 bits (22), Expect = 2.1 Identities = 133/170 (78%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 712 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 771 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| | ||||||| || |||||||||||| | ||||| | ||| ||| || Sbjct: 772 ataaaggcctatgctattgaagtttgccgacctgaacatgaagctcttgcattgtcactt 831 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || || || | ||||| ||||||||| | | |||||||| |||||||| Sbjct: 832 gttagtacggcatggggaataggtcttataattggtccagctattggagg 881
>dbj|AK064297.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A04, full insert sequence Length = 2186 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatgatacaagacatgcatgtggcaaa 302 ||||||||| ||||||||||| |||||||||||||| |||| ||||||| ||||| Sbjct: 505 atatcatcattgttccccttcttgtacttcatgataagagacttgcatgttgcaaa 560 Score = 44.1 bits (22), Expect = 2.1 Identities = 133/170 (78%) Strand = Plus / Plus Query: 897 tattggatggctattgccactagaatgctgcttggttctctaaatggcatgcttgcccca 956 ||||||||||| || || || ||| | || |||||| || ||||||| | |||| ||| Sbjct: 739 tattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttgggcca 798 Query: 957 ataaaggcttattcagttgaagtctgtcgacctgaacatcatgctctaggattatcagtt 1016 |||||||| ||| | ||||||| || |||||||||||| | ||||| | ||| ||| || Sbjct: 799 ataaaggcctatgctattgaagtttgccgacctgaacatgaagctcttgcattgtcactt 858 Query: 1017 gtaagcacaggttggggcataggtcttgttgtcggtccagccattggagg 1066 || || || | ||||| ||||||||| | | |||||||| |||||||| Sbjct: 859 gttagtacggcatggggaataggtcttataattggtccagctattggagg 908
>emb|X73528.1|TAPHOK T.aestivum gene for phosphoglycerate kinase Length = 3557 Score = 61.9 bits (31), Expect = 9e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 432 cgttccaaaattcttgtcttagatttgtctagata 466 |||||||||||||||||||||||||||||| |||| Sbjct: 268 cgttccaaaattcttgtcttagatttgtcttgata 234 Score = 58.0 bits (29), Expect = 1e-04 Identities = 29/29 (100%) Strand = Plus / Plus Query: 438 aaaattcttgtcttagatttgtctagata 466 ||||||||||||||||||||||||||||| Sbjct: 200 aaaattcttgtcttagatttgtctagata 228
>ref|NM_001065575.1| Oryza sativa (japonica cultivar-group) Os07g0180700 (Os07g0180700) mRNA, complete cds Length = 3342 Score = 60.0 bits (30), Expect = 3e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1760 aatgtccctcttcaaggctattgctccagctggagcaggtgtcttgttctcatgggccca 1819 ||||||| | |||||||| |||||||||| ||||| ||| | |||| |||||||| || Sbjct: 1470 aatgtcctttttcaaggcatttgctccagcaggagctggtattgtgttttcatgggcgca 1529 Query: 1820 aaagcgccaacatgctgctttctttccagg 1849 |||||| ||||||||| ||||||||||| Sbjct: 1530 aaagcgtcaacatgctttcttctttccagg 1559
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 60.0 bits (30), Expect = 3e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 858 agggtcatctttaacactctgtttggactgagtgtaaagtattggatggctattgccact 917 |||||||| |||||||| || ||||| || ||| || |||||||||||| ||||| || Sbjct: 24343 agggtcatatttaacacactatttggtctaagtacaacgtattggatggcaattgctaca 24402 Query: 918 agaatgctgcttggttctctaaatggcatgcttgccccaataaagg 963 ||| | || | ||| ||||||||||| | |||||||||||||||| Sbjct: 24403 agacttgtgttgggtgctctaaatggcctacttgccccaataaagg 24448 Score = 58.0 bits (29), Expect = 1e-04 Identities = 77/93 (82%) Strand = Plus / Plus Query: 1387 agatattttccttgtgggctgtaagtgacaaaaagtatggcggactaagcttttcatcta 1446 |||||||||| | ||||| | ||| |||||||||||||| |||||| | || |||||| Sbjct: 10239 agatattttctctatgggccgaaagcgacaaaaagtatggaggactaggtttctcatctg 10298 Query: 1447 aagatgtcggccaagttcttgcagcttcaggtg 1479 | |||||||| ||||| ||||||| | |||||| Sbjct: 10299 aggatgtcggtcaagtgcttgcagttacaggtg 10331 Score = 54.0 bits (27), Expect = 0.002 Identities = 75/91 (82%) Strand = Plus / Plus Query: 870 aacactctgtttggactgagtgtaaagtattggatggctattgccactagaatgctgctt 929 |||||| |||| ||| |||||||||| ||||||||||| || || || ||| | || ||| Sbjct: 1337 aacactttgttcggattgagtgtaaattattggatggcgatagcaacaagattccttctt 1396 Query: 930 ggttctctaaatggcatgcttgccccaataa 960 |||||| ||||||| | |||| |||||||| Sbjct: 1397 ggttctttaaatggtttacttggcccaataa 1427 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 ccctacaaggagttcttctacgtcggggtcacc 225 |||||||||||| |||||| |||||| |||||| Sbjct: 22432 ccctacaaggagctcttcttcgtcggcgtcacc 22464
>dbj|AK065334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H07, full insert sequence Length = 3343 Score = 60.0 bits (30), Expect = 3e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1760 aatgtccctcttcaaggctattgctccagctggagcaggtgtcttgttctcatgggccca 1819 ||||||| | |||||||| |||||||||| ||||| ||| | |||| |||||||| || Sbjct: 1471 aatgtcctttttcaaggcatttgctccagcaggagctggtattgtgttttcatgggcgca 1530 Query: 1820 aaagcgccaacatgctgctttctttccagg 1849 |||||| ||||||||| ||||||||||| Sbjct: 1531 aaagcgtcaacatgctttcttctttccagg 1560
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 ||||||||| || | ||||||||||||||||||||||| Sbjct: 179951 ctccgttccgaattacttgtcttagatttgtctagata 179914 Score = 46.1 bits (23), Expect = 0.52 Identities = 29/31 (93%) Strand = Plus / Minus Query: 436 ccaaaattcttgtcttagatttgtctagata 466 ||||||||||||||||| |||||| |||||| Sbjct: 84408 ccaaaattcttgtcttacatttgtttagata 84378 Score = 44.1 bits (22), Expect = 2.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 474 atgtatctagtcatgttttagtatttggatatattcattttt 515 |||||||||| ||||||||||||| | |||| || ||||||| Sbjct: 80431 atgtatctagacatgttttagtatatagatacatccattttt 80472
>gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q) gene, complete sequence Length = 3321 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 |||||||||||| | |||||||| |||||||||||||| Sbjct: 2956 ctccgttccaaattacttgtcttcgatttgtctagata 2919
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 |||||||||||| | |||||||| |||||||||||||| Sbjct: 190931 ctccgttccaaattacttgtcttggatttgtctagata 190968 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagatttgtctagata 466 ||||||||| || | ||||||||||||||||||||||| Sbjct: 191045 ctccgttccgaattacttgtcttagatttgtctagata 191008 Score = 48.1 bits (24), Expect = 0.13 Identities = 33/36 (91%) Strand = Plus / Minus Query: 432 cgttccaaaattcttgtcttagatttgtctagatat 467 |||||||||||| |||| ||||||||||||| |||| Sbjct: 198934 cgttccaaaattattgttttagatttgtctaaatat 198899 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 taagacaagaattttgagacgg 546 |||||||||||||||||||||| Sbjct: 198846 taagacaagaattttgagacgg 198825
>gb|AF543417.1| Zea mays major facilitator superfamily antiporter (mfs2) mRNA, complete cds Length = 1629 Score = 50.1 bits (25), Expect = 0.033 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1801 tcttgttctcatgggcccaaaagcgccaacatgctgctttctttccagg 1849 |||||||||| ||||| || |||||||| ||||| || ||||||||||| Sbjct: 1221 tcttgttctcgtgggcacagaagcgccagcatgccgcgttctttccagg 1269
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 atatcatcactgttccccttcctgtacttcatg 279 ||||||||| ||||||||||| ||||||||||| Sbjct: 82882 atatcatcattgttccccttcttgtacttcatg 82914
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttag 453 ||||||||||||||||||||||||| Sbjct: 7233 ctccgttccaaaattcttgtcttag 7209
>ref|NM_001061584.1| Oryza sativa (japonica cultivar-group) Os05g0268400 (Os05g0268400) mRNA, complete cds Length = 1245 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1717 cacaaaatcaaagaggtgctgcaaatgg 1744 ||||||| |||||||||||||||||||| Sbjct: 1043 cacaaaaacaaagaggtgctgcaaatgg 1070
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1717 cacaaaatcaaagaggtgctgcaaatgg 1744 ||||||| |||||||||||||||||||| Sbjct: 43937 cacaaaaacaaagaggtgctgcaaatgg 43964
>gb|AC137613.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034K10, complete sequence Length = 138925 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1717 cacaaaatcaaagaggtgctgcaaatgg 1744 ||||||| |||||||||||||||||||| Sbjct: 130959 cacaaaaacaaagaggtgctgcaaatgg 130986
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1717 cacaaaatcaaagaggtgctgcaaatgg 1744 ||||||| |||||||||||||||||||| Sbjct: 10659337 cacaaaaacaaagaggtgctgcaaatgg 10659364 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 528 gacaagaattttgagacggtgggagta 554 |||||| |||||||||||||||||||| Sbjct: 4875921 gacaagtattttgagacggtgggagta 4875895 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 9752085 ggcacgggaacgacaacgacga 9752106 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 9759386 ggcacgggaacgacaacgacga 9759407 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 9766691 ggcacgggaacgacaacgacga 9766712
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 13 caaggcagttagttattttattaatta 39 ||||||||||||||||| ||||||||| Sbjct: 13923392 caaggcagttagttattatattaatta 13923418
>gb|DQ026117.2| Cephaloleia tetraspilota voucher 071 contains cytochrome oxidase subunit I, tRNA-Leu and cytochrome oxidase subunit II genomic sequence; mitochondrial Length = 1692 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2060 aaataataaaaataaggaatata 2082 ||||||||||||||||||||||| Sbjct: 963 aaataataaaaataaggaatata 941
>gb|DQ026092.2| Cephaloleia trimaculata voucher 029 contains cytochrome oxidase subunit I, tRNA-Leu and cytochrome oxidase subunit II genomic sequence; mitochondrial Length = 1693 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2060 aaataataaaaataaggaatata 2082 ||||||||||||||||||||||| Sbjct: 964 aaataataaaaataaggaatata 942
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence Length = 170718 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 13 caaggcagttagttattttattaatta 39 ||||||||||||||||| ||||||||| Sbjct: 156515 caaggcagttagttattatattaatta 156541
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gacggcgccgccctcgccgccgg 124 ||||||||||||||||||||||| Sbjct: 3992446 gacggcgccgccctcgccgccgg 3992468
>gb|AC099039.1| Drosophila melanogaster, chromosome 2R, region 55A-55B, BAC clone BACR33K09, complete sequence Length = 162492 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 13 caaggcagttagttattttattaatta 39 ||||||||||||||||| ||||||||| Sbjct: 144708 caaggcagttagttattatattaatta 144682
>dbj|AP001922.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2530H12, complete sequence Length = 219366 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 782 agcaaaattttctgttgtaataa 804 ||||||||||||||||||||||| Sbjct: 19637 agcaaaattttctgttgtaataa 19615
>gb|AC004293.1|AC004293 Drosophila melanogaster DNA sequence (P1 DS08109 (D176)), complete sequence Length = 79559 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 13 caaggcagttagttattttattaatta 39 ||||||||||||||||| ||||||||| Sbjct: 39095 caaggcagttagttattatattaatta 39121
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 429 ctccgttccaaaattcttgtcttagat 455 |||||| |||||||||||||||||||| Sbjct: 1926 ctccgtcccaaaattcttgtcttagat 1900 Score = 46.1 bits (23), Expect = 0.52 Identities = 29/31 (93%) Strand = Plus / Plus Query: 524 ctaagacaagaattttgagacggtgggagta 554 ||||||||||||||||| ||||| ||||||| Sbjct: 1902 ctaagacaagaattttgggacggagggagta 1932
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 528 gacaagaattttgagacggtgggagta 554 |||||| |||||||||||||||||||| Sbjct: 148329 gacaagtattttgagacggtgggagta 148303
>dbj|AP002815.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-939C17 Length = 174484 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 782 agcaaaattttctgttgtaataa 804 ||||||||||||||||||||||| Sbjct: 158054 agcaaaattttctgttgtaataa 158032
>ref|XM_001233838.1| PREDICTED: Gallus gallus hypothetical protein LOC771555 (LOC771555), mRNA Length = 6768 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1709 tgctgtgtcacaaaatcaaaga 1730 |||||||||||||||||||||| Sbjct: 4610 tgctgtgtcacaaaatcaaaga 4589
>ref|NM_001069708.1| Oryza sativa (japonica cultivar-group) Os09g0415400 (Os09g0415400) mRNA, complete cds Length = 1153 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 497 gacaacgacgacgcgacgccgccgcc 522 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 731 gacaacgacgacgcgacgccgccgcc 756
>gb|AC145801.3| Xenopus tropicalis clone CH216-76O23, complete sequence Length = 168816 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 570 ctaaggtatgttgatgtctatg 591 |||||||||||||||||||||| Sbjct: 113426 ctaaggtatgttgatgtctatg 113447
>emb|AL929603.2|TBBCHR1A1 Trypanosoma brucei chromosome 1, complete sequence Length = 1064672 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 407 cattcaaatataaacaaatata 428 |||||||||||||||||||||| Sbjct: 691484 cattcaaatataaacaaatata 691463
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1501 tacttgtgtatagatatgtcca 1522 |||||||||||||||||||||| Sbjct: 182939 tacttgtgtatagatatgtcca 182918
>gb|AC132484.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0038E22, complete sequence Length = 150766 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 115177 ggcacgggaacgacaacgacga 115198 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 122478 ggcacgggaacgacaacgacga 122499 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ggcacgggaacgacaacgacga 98 |||||||||||||||||||||| Sbjct: 129783 ggcacgggaacgacaacgacga 129804
>gb|AC139755.3| Mus musculus BAC clone RP24-96N20 from chromosome 6, complete sequence Length = 192869 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 490 tttagtatttggatatattcat 511 |||||||||||||||||||||| Sbjct: 178907 tttagtatttggatatattcat 178886
>ref|XM_504765.1| Yarrowia lipolytica CLIB122, YALI0E34265g predicted mRNA Length = 1599 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 602 tgatgcagagactcggggttct 623 |||||||||||||||||||||| Sbjct: 560 tgatgcagagactcggggttct 539
>gb|DQ175991.1| Hordeum vulgare subsp. vulgare clone 65-21A-RB flanking T-DNA insertion sequence Length = 325 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 429 ctccgttccaaaattcttgtcttagatttg 458 |||| ||| ||||||||||||||||||||| Sbjct: 243 ctccattctaaaattcttgtcttagatttg 272
>gb|AC121968.3| Mus musculus BAC clone RP24-272N4 from chromosome 6, complete sequence Length = 193207 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 tttagtatttggatatattcat 511 |||||||||||||||||||||| Sbjct: 178058 tttagtatttggatatattcat 178079
>gb|AC112644.3| Homo sapiens 3 BAC RP11-10O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178521 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2058 taaaataataaaaataaggaat 2079 |||||||||||||||||||||| Sbjct: 83712 taaaataataaaaataaggaat 83691
>gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, complete sequence Length = 194619 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1144 tgccgtgtctttttatttcact 1165 |||||||||||||||||||||| Sbjct: 75268 tgccgtgtctttttatttcact 75289
>gb|AC092288.3| Homo sapiens chromosome 5 clone CTD-2293K3, complete sequence Length = 93844 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1144 tgccgtgtctttttatttcact 1165 |||||||||||||||||||||| Sbjct: 11011 tgccgtgtctttttatttcact 11032
>gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, complete sequence Length = 172180 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1144 tgccgtgtctttttatttcact 1165 |||||||||||||||||||||| Sbjct: 45014 tgccgtgtctttttatttcact 44993
>gb|AC084816.14| Homo sapiens 12p BAC RP11-114G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148122 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 464 atataaatgcatgtatctagtcatgt 489 |||||||| ||||||||||||||||| Sbjct: 33970 atataaattcatgtatctagtcatgt 33945
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 14795591 gacaacgacgacgcgacgccgccgcc 14795616 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 14795825 gacaacgacgacgcgacgccgccgcc 14795850 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1301 gaagaagagtctatataagaac 1322 |||||||||||||||||||||| Sbjct: 15223916 gaagaagagtctatataagaac 15223895
>emb|AL449343.16| Human DNA sequence from clone RP11-574F9 on chromosome 6, complete sequence Length = 103487 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 854 cttcagggtcatctttaacactctgt 879 |||||||||||| ||||||||||||| Sbjct: 67005 cttcagggtcatgtttaacactctgt 66980
>emb|AL034347.23|HS676J13 Human DNA sequence from clone RP4-676J13 on chromosome 6q14 Contains the 3' end of the gene for flavohemoprotein B5+B5R and a novel gene, complete sequence Length = 117045 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2060 aaataataaaaataaggaatat 2081 |||||||||||||||||||||| Sbjct: 83222 aaataataaaaataaggaatat 83243
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2061 aataataaaaataaggaatata 2082 |||||||||||||||||||||| Sbjct: 157147 aataataaaaataaggaatata 157168
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 101 cgacggcgccgccctcgccgccggag 126 |||||||| ||||||||||||||||| Sbjct: 63134 cgacggcggcgccctcgccgccggag 63109
>emb|BX936431.7| Zebrafish DNA sequence from clone CH211-208A5 in linkage group 6, complete sequence Length = 127584 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2061 aataataaaaataaggaatatacata 2086 ||||||||||||||| |||||||||| Sbjct: 28768 aataataaaaataagtaatatacata 28793
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 gccgccctcgccgccggagacg 129 |||||||||||||||||||||| Sbjct: 786351 gccgccctcgccgccggagacg 786330
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1301 gaagaagagtctatataagaac 1322 |||||||||||||||||||||| Sbjct: 117892 gaagaagagtctatataagaac 117871
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1301 gaagaagagtctatataagaac 1322 |||||||||||||||||||||| Sbjct: 3105 gaagaagagtctatataagaac 3084
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 3930 gacaacgacgacgcgacgccgccgcc 3955 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 4164 gacaacgacgacgcgacgccgccgcc 4189
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 80980 gacaacgacgacgcgacgccgccgcc 81005 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 81214 gacaacgacgacgcgacgccgccgcc 81239
>dbj|AK119737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-D08, full insert sequence Length = 1152 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 497 gacaacgacgacgcgacgccgccgcc 522 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 gacaacgacgacgcgacggcgccgcc 113 |||||||||||||||||| ||||||| Sbjct: 731 gacaacgacgacgcgacgccgccgcc 756
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 602 tgatgcagagactcggggttct 623 |||||||||||||||||||||| Sbjct: 4073297 tgatgcagagactcggggttct 4073318
>emb|CR855389.7| Zebrafish DNA sequence from clone DKEY-74I1 in linkage group 15, complete sequence Length = 182027 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2058 taaaataataaaaataaggaatatacata 2086 ||||| |||||||||||| |||||||||| Sbjct: 47326 taaaagaataaaaataagaaatatacata 47298
>emb|CR855165.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0139P06, complete sequence Length = 98839 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 62874 aagaagagtctatataagaac 62894
>gb|CP000468.1| Escherichia coli APEC O1, complete genome Length = 5082025 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3712302 aggctattgctccagctggag 3712282
>ref|NM_001067955.1| Oryza sativa (japonica cultivar-group) Os08g0270800 (Os08g0270800) mRNA, complete cds Length = 1154 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgacggcgccgccctcgccgccgg 124 ||||||||| ||||||||||||||| Sbjct: 294 gcgacggcggcgccctcgccgccgg 270
>emb|CR936298.6| Zebrafish DNA sequence from clone DKEY-75D8 in linkage group 21, complete sequence Length = 11754 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1702 aaaacagtgctgtgtcacaaa 1722 ||||||||||||||||||||| Sbjct: 3435 aaaacagtgctgtgtcacaaa 3415
>gb|CP000247.1| Escherichia coli 536, complete genome Length = 4938920 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3531322 aggctattgctccagctggag 3531302
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2064 aataaaaataaggaatatacatata 2088 ||||||||||||||||||| ||||| Sbjct: 201334 aataaaaataaggaatatatatata 201310
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3639390 aggctattgctccagctggag 3639370
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3404475 aggctattgctccagctggag 3404455
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 gacgcgacggcgccgccctcg 117 ||||||||||||||||||||| Sbjct: 955185 gacgcgacggcgccgccctcg 955165
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 92750 aagaagagtctatataagaac 92770
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 tgcatgtatctagtcatgttt 491 ||||||||||||||||||||| Sbjct: 101836 tgcatgtatctagtcatgttt 101816
>gb|AC114984.18| Mus musculus chromosome 18, clone RP23-248F9, complete sequence Length = 185563 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2058 taaaataataaaaataaggaatatacata 2086 ||||||||||||||||| ||| ||||||| Sbjct: 114323 taaaataataaaaataatgaacatacata 114351
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 94921 aagaagagtctatataagaac 94901
>gb|AC132357.3| Mus musculus BAC clone RP24-120G2 from chromosome 18, complete sequence Length = 189088 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2058 taaaataataaaaataaggaatatacata 2086 ||||||||||||||||| ||| ||||||| Sbjct: 46003 taaaataataaaaataatgaacatacata 45975
>gb|AC123801.4| Mus musculus BAC clone RP24-374A1 from chromosome 15, complete sequence Length = 150979 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aaaaaattccaacatattact 397 ||||||||||||||||||||| Sbjct: 66133 aaaaaattccaacatattact 66153
>gb|AC122900.3| Mus musculus BAC clone RP23-39N24 from 15, complete sequence Length = 203855 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aaaaaattccaacatattact 397 ||||||||||||||||||||| Sbjct: 1397 aaaaaattccaacatattact 1417
>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence Length = 213855 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2055 atgtaaaataataaaaataag 2075 ||||||||||||||||||||| Sbjct: 17921 atgtaaaataataaaaataag 17901
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3421286 aggctattgctccagctggag 3421266
>gb|U00096.2| Escherichia coli K12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3419453 aggctattgctccagctggag 3419433
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence Length = 238662 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2058 taaaataataaaaataaggaatatacata 2086 ||||||||||||||||| ||| ||||||| Sbjct: 14445 taaaataataaaaataatgaacatacata 14417
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 83868 aagaagagtctatataagaac 83888
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 29255 aagaagagtctatataagaac 29235
>gb|AC099536.3| Homo sapiens chromosome 3 clone RP11-27C2, complete sequence Length = 170561 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2062 ataataaaaataaggaatatacata 2086 ||||||||||||||||| ||||||| Sbjct: 158750 ataataaaaataaggaacatacata 158774
>gb|AC011031.12| Homo sapiens chromosome 8, clone RP11-345I19, complete sequence Length = 183771 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 cttcattcaaatataaacaaatata 428 |||||| |||||||||||||||||| Sbjct: 58161 cttcatacaaatataaacaaatata 58137
>gb|AC022069.6| Homo sapiens, clone RP11-107K17, complete sequence Length = 169240 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1505 tgtgtatagatatgtccacaaatat 1529 |||||||||||||||||||| |||| Sbjct: 60367 tgtgtatagatatgtccacatatat 60391
>gb|AF078728.2| Caprine herpesvirus 1 strain E/CH glycoprotein B gene, complete cds Length = 3029 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 cgacggcgccgccctcgccgccggagacg 129 ||||||||||||||||| |||||| |||| Sbjct: 475 cgacggcgccgccctcggcgccggcgacg 503
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 cgccctcgccgccggagacgg 130 ||||||||||||||||||||| Sbjct: 106902 cgccctcgccgccggagacgg 106882 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cgccctcgccgccggagacgg 130 ||||||||||||||||||||| Sbjct: 131316 cgccctcgccgccggagacgg 131336
>gb|AC090337.5| Homo sapiens chromosome 18, clone RP11-674P19, complete sequence Length = 183876 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 aaaacctaagacaagaatttt 539 ||||||||||||||||||||| Sbjct: 162541 aaaacctaagacaagaatttt 162561
>gb|AC021755.9| Homo sapiens chromosome 15 clone RP11-521C20 map 15q15, complete sequence Length = 161794 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1687 gtacttgtattctgcaaaaca 1707 ||||||||||||||||||||| Sbjct: 103794 gtacttgtattctgcaaaaca 103774
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 15587541 aagaagagtctatataagaac 15587521
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgacggcgccgccctcgccgccgg 124 ||||||||| ||||||||||||||| Sbjct: 10361118 gcgacggcggcgccctcgccgccgg 10361094
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1809 tcatgggcccaaaagcgccaacatgctgctttctttccagg 1849 |||||||| |||||||| ||||||||| ||||||||||| Sbjct: 4283736 tcatgggcgcaaaagcgtcaacatgctttcttctttccagg 4283776
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 28613568 aagaagagtctatataagaac 28613588
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 2138973 aagaagagtctatataagaac 2138953 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 29003048 aagaagagtctatataagaac 29003028
>gb|AC093556.2| Homo sapiens chromosome 3 clone RP11-48E21, complete sequence Length = 152726 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2062 ataataaaaataaggaatatacata 2086 ||||||||||||||||| ||||||| Sbjct: 43323 ataataaaaataaggaacatacata 43299
>emb|AL645495.4| Human DNA sequence from clone RP13-472L18 on chromosome 13, complete sequence Length = 81091 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1853 tcaaatgatatttctgatttt 1873 ||||||||||||||||||||| Sbjct: 75395 tcaaatgatatttctgatttt 75375
>gb|AC026585.9| Homo sapiens, clone RP11-17E3, complete sequence Length = 172798 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 519 aaaacctaagacaagaatttt 539 ||||||||||||||||||||| Sbjct: 7636 aaaacctaagacaagaatttt 7656
>emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chromosome Xq21.32-22.3 Contains the PCDH19 gene for protocadherin 19 protein and a CpG island, complete sequence Length = 168065 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2059 aaaataataaaaataaggaatatac 2083 |||||||||| |||||||||||||| Sbjct: 63501 aaaataataataataaggaatatac 63525
>emb|AL157406.19| Human DNA sequence from clone RP3-380B4 on chromosome 1p31.3-33 Contains a novel gene, complete sequence Length = 123085 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2067 aaaaataaggaatatacatat 2087 ||||||||||||||||||||| Sbjct: 25095 aaaaataaggaatatacatat 25075
>emb|AL133517.11| Human DNA sequence from clone RP4-730K3 on chromosome 1p12-13.3 Contains the 3' end of the gene for membrane-associated guanylate kinase-related 3 (MAGI-3), the 3' end of the PHTF1 gene for putative homeodomain transcription factor 1 and a ribosomal protein S2 (RPS2) pseudogene, complete sequence Length = 125653 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1862 atttctgattttgaatatagt 1882 ||||||||||||||||||||| Sbjct: 14579 atttctgattttgaatatagt 14599
>gb|AC025429.6| Homo sapiens chromosome 15 clone CTD-2006D8 map 15q14, complete sequence Length = 142698 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1687 gtacttgtattctgcaaaaca 1707 ||||||||||||||||||||| Sbjct: 4546 gtacttgtattctgcaaaaca 4526
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3394557 aggctattgctccagctggag 3394537
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 8.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 1129 ggtttccctatttgttgccgtgtcttttt 1157 ||||||||| ||||||||||||||||||| Sbjct: 254464 ggtttccct-tttgttgccgtgtcttttt 254491
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cggcgccgccctcgccgccgg 124 ||||||||||||||||||||| Sbjct: 184017 cggcgccgccctcgccgccgg 183997
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cggcgccgccctcgccgccgg 124 ||||||||||||||||||||| Sbjct: 232185 cggcgccgccctcgccgccgg 232165
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 104358 aagaagagtctatataagaac 104378
>emb|AL645904.13| Mouse DNA sequence from clone RP23-121P11 on chromosome 11 Contains the gene for a novel protein (1700121K02Rik), the Hnrph1 gene for heterogeneous nuclear ribonucleoprotein H1, the Rufy1 gene for RUN and FYVE domain containing 1, a novel pseudogene and three CpG islands, complete sequence Length = 193696 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2054 catgtaaaataataaaaataa 2074 ||||||||||||||||||||| Sbjct: 135260 catgtaaaataataaaaataa 135240
>emb|AL445623.2|HS315I14 Homo sapiens chromosome 9 BAC RP11-315I14, complete sequence Length = 198637 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1847 aggggatcaaatgatatttct 1867 ||||||||||||||||||||| Sbjct: 14707 aggggatcaaatgatatttct 14687
>emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitochondrial genome Length = 85779 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2059 aaaataataaaaataaggaat 2079 ||||||||||||||||||||| Sbjct: 2178 aaaataataaaaataaggaat 2198
>emb|AJ006985.1|SGAJ6985 Streptomyces glaucescens GLA.0 gene cluster for 5'-hydroxystreptomycin biosynthesis Length = 25459 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 gacggcgccgccctcgccgccggag 126 |||||| |||||||||||||||||| Sbjct: 14968 gacggcaccgccctcgccgccggag 14944
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence Length = 150102 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1712 tgtgtcacaaaatcaaagagg 1732 ||||||||||||||||||||| Sbjct: 1796 tgtgtcacaaaatcaaagagg 1816
>emb|BX511209.11| Zebrafish DNA sequence from clone CH211-129A6 in linkage group 5, complete sequence Length = 159017 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2060 aaataataaaaataaggaata 2080 ||||||||||||||||||||| Sbjct: 142388 aaataataaaaataaggaata 142408
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 74907 aagaagagtctatataagaac 74887
>dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 4156436 aggctattgctccagctggag 4156416
>gb|AC019181.4| Homo sapiens BAC clone RP11-272E3 from 2, complete sequence Length = 190998 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 787 aattttctgttgtaataaata 807 ||||||||||||||||||||| Sbjct: 14784 aattttctgttgtaataaata 14764
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 42.1 bits (21), Expect = 8.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1809 tcatgggcccaaaagcgccaacatgctgctttctttccagg 1849 |||||||| |||||||| ||||||||| ||||||||||| Sbjct: 104790 tcatgggcgcaaaagcgtcaacatgctttcttctttccagg 104830
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgacggcgccgccctcgccgccgg 124 ||||||||| ||||||||||||||| Sbjct: 62076 gcgacggcggcgccctcgccgccgg 62052
>gb|AC090946.2| Homo sapiens chromosome 3 clone RP11-2B2 map 3p, complete sequence Length = 171206 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1853 tcaaatgatatttctgatttt 1873 ||||||||||||||||||||| Sbjct: 16456 tcaaatgatatttctgatttt 16476
>gb|AC087858.2| Homo sapiens chromosome 3 clone RP11-207E20 map 3p, complete sequence Length = 179723 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1853 tcaaatgatatttctgatttt 1873 ||||||||||||||||||||| Sbjct: 48390 tcaaatgatatttctgatttt 48370
>dbj|AK066874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I05, full insert sequence Length = 1154 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgacggcgccgccctcgccgccgg 124 ||||||||| ||||||||||||||| Sbjct: 295 gcgacggcggcgccctcgccgccgg 271
>dbj|AK061845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F01, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gcgacggcgccgccctcgccgccgg 124 ||||||||| ||||||||||||||| Sbjct: 161 gcgacggcggcgccctcgccgccgg 137
>emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in linkage group 5, complete sequence Length = 178961 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2060 aaataataaaaataaggaata 2080 ||||||||||||||||||||| Sbjct: 123472 aaataataaaaataaggaata 123452
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7, complete sequence Length = 197927 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1497 caaatacttgtgtatagatat 1517 ||||||||||||||||||||| Sbjct: 118631 caaatacttgtgtatagatat 118611
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cgacgacgcgacggcgccgcc 113 ||||||||||||||||||||| Sbjct: 3441292 cgacgacgcgacggcgccgcc 3441272
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes Length = 372438 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 202176 aggctattgctccagctggag 202156
>ref|XM_843091.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0489) partial mRNA Length = 3429 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gacgcgacggcgccgccctcg 117 ||||||||||||||||||||| Sbjct: 2983 gacgcgacggcgccgccctcg 3003
>emb|CT573093.3| Macaca mulatta chromosome 9 CH250-1K10, complete sequence Length = 185363 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1847 aggggatcaaatgatatttct 1867 ||||||||||||||||||||| Sbjct: 55810 aggggatcaaatgatatttct 55830
>emb|BX004822.12| Zebrafish DNA sequence from clone DKEY-18F18, complete sequence Length = 201902 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1702 aaaacagtgctgtgtcacaaa 1722 ||||||||||||||||||||| Sbjct: 132031 aaaacagtgctgtgtcacaaa 132011
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 535 attttgagacggtgggagtactcagctag 563 |||||| ||||| |||||||||||||||| Sbjct: 65865 attttgggacggagggagtactcagctag 65837
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1302 aagaagagtctatataagaac 1322 ||||||||||||||||||||| Sbjct: 90212 aagaagagtctatataagaac 90192
>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence Length = 180915 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1847 aggggatcaaatgatatttct 1867 ||||||||||||||||||||| Sbjct: 28594 aggggatcaaatgatatttct 28614
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 4223654 aggctattgctccagctggag 4223634
>gb|AF020503.1|AF020503 Homo sapiens FRA3B common fragile region, diadenosine triphosphate hydrolase (FHIT) gene, exon 5 Length = 206880 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2062 ataataaaaataaggaatatacata 2086 ||||||||||||||||| ||||||| Sbjct: 143217 ataataaaaataaggaacatacata 143241
>gb|AF023460.1|AF023460 Homo sapiens FHIT gene, exon 5 sequence; and FRA3B region sequence Length = 31102 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2062 ataataaaaataaggaatatacata 2086 ||||||||||||||||| ||||||| Sbjct: 21632 ataataaaaataaggaacatacata 21656
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3204039 aggctattgctccagctggag 3204019
>dbj|AB032718.1| Bombyx mori gypsy-Ty3-like retrotransposon Kabuki gene and nested retrotransposable elements Length = 18530 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 acgtcggggtcaccacttttg 232 ||||||||||||||||||||| Sbjct: 5256 acgtcggggtcaccacttttg 5236
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3269703 aggctattgctccagctggag 3269683
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1774 aggctattgctccagctggag 1794 ||||||||||||||||||||| Sbjct: 3594392 aggctattgctccagctggag 3594372
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cgccctcgccgccggagacgg 130 ||||||||||||||||||||| Sbjct: 4129 cgccctcgccgccggagacgg 4149
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cgccctcgccgccggagacgg 130 ||||||||||||||||||||| Sbjct: 1377 cgccctcgccgccggagacgg 1397
>emb|AL732606.5| Mouse DNA sequence from clone RP23-271B17 on chromosome 11, complete sequence Length = 113285 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 495 tatttggatatattcattttt 515 ||||||||||||||||||||| Sbjct: 3118 tatttggatatattcattttt 3138
>emb|AL670680.6| Mouse DNA sequence from clone RP23-314D24 on chromosome 4, complete sequence Length = 150897 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2054 catgtaaaataataaaaataa 2074 ||||||||||||||||||||| Sbjct: 69338 catgtaaaataataaaaataa 69318 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 432,178,868 Number of extensions: 25131114 Number of successful extensions: 194038 Number of sequences better than 10.0: 179 Number of HSP's gapped: 193986 Number of HSP's successfully gapped: 378 Length of query: 2120 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2097 Effective length of database: 18,503,978,556 Effective search space: 38802843031932 Effective search space used: 38802843031932 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
