ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf59m09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001053730.1| Oryza sativa (japonica cultivar-group) Os02g0572400 (Os02g0572400) mRNA, complete cds Length = 2197 Score = 1350 bits (681), Expect = 0.0 Identities = 1080/1213 (89%) Strand = Plus / Plus Query: 611 tggatagccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaag 670 |||||||||| || ||||||||||| |||||||| ||||| || | || |||| ||||| Sbjct: 581 tggatagcccaactgagggcttctcgtctatttccgaggccatcaaagatattcaacaag 640 Query: 671 gaaaacttgtgattgtcgttgatgacgaatcaagagaaaatgaaggtgatcttatattgg 730 |||||||||||||||| ||||| || ||||||||||||||||| || ||||||||| ||| Sbjct: 641 gaaaacttgtgattgttgttgacgatgaatcaagagaaaatgagggagatcttataatgg 700 Query: 731 ctgcttctttggttaccccagaggctatggctttcatagtaaggcatagcacaggaattg 790 ||||||||||||||||||||||||| ||||| || | ||||| || |||||||||| | Sbjct: 701 ctgcttctttggttaccccagaggccatggcgtttgttgtaagatatggcacaggaatag 760 Query: 791 tatgtgttagcatgaaagaagatgacctggaaagattgaaccttcctttgatggtttcaa 850 | |||||||||||||||||||| || || ||||||||||||||||||||||||||| ||| Sbjct: 761 tgtgtgttagcatgaaagaagaggatcttgaaagattgaaccttcctttgatggttgcaa 820 Query: 851 caaaggagaatgaggagaagctatgcactgctttcaccattactgtggatgctaaagaag 910 ||||||| |||||||||||||| || ||||| ||||| |||| |||||||||||||| | Sbjct: 821 caaaggaaaatgaggagaagctctgtactgcattcactgttacagtggatgctaaagagg 880 Query: 911 gcacaacgactggggtatctgcaaaggatagggcaaagacagtcatgactcttgcatctc 970 | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 881 gaacaacaactggggtatctgcaaaggatagggcaaagacagttatgactcttgcatccc 940 Query: 971 ctcactcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagag 1030 || |||| ||||||||||| ||||||||||| || |||||||| |||||||| ||||||| Sbjct: 941 ctgactctaagcctgaagacttcaatcggcctggtcatattttccctctgaaatacagag 1000 Query: 1031 atgggggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctgg 1090 | || |||||||| |||||||||||||| |||||||||||||| ||||||||| || | | Sbjct: 1001 agggtggtgttctgaaacgagctggacatactgaagcatctgtagatcttgctatgttag 1060 Query: 1091 ctgggctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggctc 1150 ||||| ||||||||| | || | ||||||||||||||||||||||| |||||||||| Sbjct: 1061 ctgggttacctcctgctgcggtcttatgtgagattgtggatgaggatgggtccatggctc 1120 Query: 1151 gcttacccaagctgcgcgtgtttgctgaaaaggaaaatttgaagattgtatcgattgctg 1210 || |||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1121 gcctaccaaagctgcgcgtgtttgctgaaagggagaatttgaagattgtatccattgctg 1180 Query: 1211 atttgattagatataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgct 1270 | ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1181 acttgattagatataggagaaaaagagacaggctagttgaacgttcatctgttgcacgct 1240 Query: 1271 tacctttgagatggggcaatgtccatgcttactgctacagatctgttattgatgggatcg 1330 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1241 tacctttgagatggggtaatgtccgcgcttactgctacagatctgttattgatgggatag 1300 Query: 1331 agcatatcgcaatggtgaaaggtgagattggagatggtcaagatattcttgtgagggtcc 1390 ||||||| |||||||||||||| ||||||||||||||||||| || | |||||||| | Sbjct: 1301 agcatattgcaatggtgaaaggggagattggagatggtcaaggcgttttagtgagggtgc 1360 Query: 1391 attccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccagc 1450 | ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1361 actccgaatgcctcacaggggacatttttggatcagcaagatgtgattgtggtgatcagc 1420 Query: 1451 ttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgtg 1510 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 ttgccatggcaatggagatgattgagaaggctggaaggggtgtactagtttatcttcgtg 1480 Query: 1511 gacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagatg 1570 |||||||||||||||| |||||||| ||||||||||| |||||||||||| | ||||||| Sbjct: 1481 gacatgaagggaggggtattggtctcggtcacaagctccgtgcttataacctgcaagatg 1540 Query: 1571 atggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagggaat 1630 | || || ||||||||||||||||| || || ||||||||||||||||| || |||||| Sbjct: 1541 acgggcgcgacactgtggaggctaatgaagacctaggactgcctgtggattcacgggaat 1600 Query: 1631 atgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatgacca 1690 |||| || ||||||||||||||||| || || || ||||||||||||||||||||||| | Sbjct: 1601 atggcattggtgcacagatattacgtgatctgggggtccgttcaatgaagttgatgacta 1660 Query: 1691 acaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggtagggtgc 1750 | || || || || |||| |||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 1661 ataacccagcaaagtatggtggtctcaagggttatggattgagcattgtgggcagggttc 1720 Query: 1751 ccttggtaactccaataaccactgagaatcggagatacttggagaccaaaagaacgaaaa 1810 |||||||||||||||| ||| | ||||||||||||||| |||| || || ||||| || | Sbjct: 1721 ccttggtaactccaatcacctcagagaatcggagatacctggaaacaaagagaacaaaga 1780 Query: 1811 tggggcatgtata 1823 ||||||||||||| Sbjct: 1781 tggggcatgtata 1793 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 212 aggggagcatcggcatggcttcgattgcgccgccgtcttcctccgtcgcagcacttcgcc 271 |||| |||||||| ||||| |||||| ||||| ||||||| || ||||| || || ||| Sbjct: 182 agggaagcatcgggatggcgtcgatttcgccgacgtcttcatcggtcgccgccctccgcg 241 Query: 272 gccaaccggtgcagttcttgagaggtagtgacgtttccaagcaggcaaagggatca 327 |||| |||||||||||| ||| ||| ||| || |||||| | |||||||||||| Sbjct: 242 gccacccggtgcagttcgtgaaaggcggtgcagtctccaaggaagcaaagggatca 297
>dbj|AK069475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020F21, full insert sequence Length = 2198 Score = 1350 bits (681), Expect = 0.0 Identities = 1080/1213 (89%) Strand = Plus / Plus Query: 611 tggatagccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaag 670 |||||||||| || ||||||||||| |||||||| ||||| || | || |||| ||||| Sbjct: 582 tggatagcccaactgagggcttctcgtctatttccgaggccatcaaagatattcaacaag 641 Query: 671 gaaaacttgtgattgtcgttgatgacgaatcaagagaaaatgaaggtgatcttatattgg 730 |||||||||||||||| ||||| || ||||||||||||||||| || ||||||||| ||| Sbjct: 642 gaaaacttgtgattgttgttgacgatgaatcaagagaaaatgagggagatcttataatgg 701 Query: 731 ctgcttctttggttaccccagaggctatggctttcatagtaaggcatagcacaggaattg 790 ||||||||||||||||||||||||| ||||| || | ||||| || |||||||||| | Sbjct: 702 ctgcttctttggttaccccagaggccatggcgtttgttgtaagatatggcacaggaatag 761 Query: 791 tatgtgttagcatgaaagaagatgacctggaaagattgaaccttcctttgatggtttcaa 850 | |||||||||||||||||||| || || ||||||||||||||||||||||||||| ||| Sbjct: 762 tgtgtgttagcatgaaagaagaggatcttgaaagattgaaccttcctttgatggttgcaa 821 Query: 851 caaaggagaatgaggagaagctatgcactgctttcaccattactgtggatgctaaagaag 910 ||||||| |||||||||||||| || ||||| ||||| |||| |||||||||||||| | Sbjct: 822 caaaggaaaatgaggagaagctctgtactgcattcactgttacagtggatgctaaagagg 881 Query: 911 gcacaacgactggggtatctgcaaaggatagggcaaagacagtcatgactcttgcatctc 970 | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 882 gaacaacaactggggtatctgcaaaggatagggcaaagacagttatgactcttgcatccc 941 Query: 971 ctcactcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagag 1030 || |||| ||||||||||| ||||||||||| || |||||||| |||||||| ||||||| Sbjct: 942 ctgactctaagcctgaagacttcaatcggcctggtcatattttccctctgaaatacagag 1001 Query: 1031 atgggggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctgg 1090 | || |||||||| |||||||||||||| |||||||||||||| ||||||||| || | | Sbjct: 1002 agggtggtgttctgaaacgagctggacatactgaagcatctgtagatcttgctatgttag 1061 Query: 1091 ctgggctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggctc 1150 ||||| ||||||||| | || | ||||||||||||||||||||||| |||||||||| Sbjct: 1062 ctgggttacctcctgctgcggtcttatgtgagattgtggatgaggatgggtccatggctc 1121 Query: 1151 gcttacccaagctgcgcgtgtttgctgaaaaggaaaatttgaagattgtatcgattgctg 1210 || |||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1122 gcctaccaaagctgcgcgtgtttgctgaaagggagaatttgaagattgtatccattgctg 1181 Query: 1211 atttgattagatataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgct 1270 | ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1182 acttgattagatataggagaaaaagagacaggctagttgaacgttcatctgttgcacgct 1241 Query: 1271 tacctttgagatggggcaatgtccatgcttactgctacagatctgttattgatgggatcg 1330 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1242 tacctttgagatggggtaatgtccgcgcttactgctacagatctgttattgatgggatag 1301 Query: 1331 agcatatcgcaatggtgaaaggtgagattggagatggtcaagatattcttgtgagggtcc 1390 ||||||| |||||||||||||| ||||||||||||||||||| || | |||||||| | Sbjct: 1302 agcatattgcaatggtgaaaggggagattggagatggtcaaggcgttttagtgagggtgc 1361 Query: 1391 attccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccagc 1450 | ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1362 actccgaatgcctcacaggggacatttttggatcagcaagatgtgattgtggtgatcagc 1421 Query: 1451 ttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgtg 1510 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1422 ttgccatggcaatggagatgattgagaaggctggaaggggtgtactagtttatcttcgtg 1481 Query: 1511 gacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagatg 1570 |||||||||||||||| |||||||| ||||||||||| |||||||||||| | ||||||| Sbjct: 1482 gacatgaagggaggggtattggtctcggtcacaagctccgtgcttataacctgcaagatg 1541 Query: 1571 atggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagggaat 1630 | || || ||||||||||||||||| || || ||||||||||||||||| || |||||| Sbjct: 1542 acgggcgcgacactgtggaggctaatgaagacctaggactgcctgtggattcacgggaat 1601 Query: 1631 atgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatgacca 1690 |||| || ||||||||||||||||| || || || ||||||||||||||||||||||| | Sbjct: 1602 atggcattggtgcacagatattacgtgatctgggggtccgttcaatgaagttgatgacta 1661 Query: 1691 acaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggtagggtgc 1750 | || || || || |||| |||||| ||||||||||| |||||||||||||| ||||| | Sbjct: 1662 ataacccagcaaagtatggtggtctcaagggttatggattgagcattgtgggcagggttc 1721 Query: 1751 ccttggtaactccaataaccactgagaatcggagatacttggagaccaaaagaacgaaaa 1810 |||||||||||||||| ||| | ||||||||||||||| |||| || || ||||| || | Sbjct: 1722 ccttggtaactccaatcacctcagagaatcggagatacctggaaacaaagagaacaaaga 1781 Query: 1811 tggggcatgtata 1823 ||||||||||||| Sbjct: 1782 tggggcatgtata 1794 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 212 aggggagcatcggcatggcttcgattgcgccgccgtcttcctccgtcgcagcacttcgcc 271 |||| |||||||| ||||| |||||| ||||| ||||||| || ||||| || || ||| Sbjct: 183 agggaagcatcgggatggcgtcgatttcgccgacgtcttcatcggtcgccgccctccgcg 242 Query: 272 gccaaccggtgcagttcttgagaggtagtgacgtttccaagcaggcaaagggatca 327 |||| |||||||||||| ||| ||| ||| || |||||| | |||||||||||| Sbjct: 243 gccacccggtgcagttcgtgaaaggcggtgcagtctccaaggaagcaaagggatca 298
>dbj|AK058464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A10, full insert sequence Length = 1529 Score = 1285 bits (648), Expect = 0.0 Identities = 1014/1136 (89%) Strand = Plus / Plus Query: 688 gttgatgacgaatcaagagaaaatgaaggtgatcttatattggctgcttctttggttacc 747 ||||| || ||||||||||||||||| || ||||||||| |||||||||||||||||||| Sbjct: 5 gttgacgatgaatcaagagaaaatgagggagatcttatagtggctgcttctttggttacc 64 Query: 748 ccagaggctatggctttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaa 807 |||||||| ||||| || | ||||| || |||||||||| || ||||||||||||||| Sbjct: 65 ccagaggccatggcgtttgttgtaagatatggcacaggaatagtgtgtgttagcatgaaa 124 Query: 808 gaagatgacctggaaagattgaaccttcctttgatggtttcaacaaaggagaatgaggag 867 ||||| || || ||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 125 gaagaggatcttgaaagattgaaccttcctttgatggttgcaacaaaggaaaatgaggag 184 Query: 868 aagctatgcactgctttcaccattactgtggatgctaaagaaggcacaacgactggggta 927 ||||| || ||||| ||||| |||| |||||||||||||| || ||||| ||||||||| Sbjct: 185 aagctctgtactgcattcactgttacagtggatgctaaagagggaacaacaactggggta 244 Query: 928 tctgcaaaggatagggcaaagacagtcatgactcttgcatctcctcactcaaagcctgaa 987 |||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||| Sbjct: 245 tctgcaaaggatagggcaaagacagttatgactcttgcatcccctgactctaagcctgaa 304 Query: 988 gatttcaatcggccaggccatatttttcctctgaagtacagagatgggggtgttctcaaa 1047 || ||||||||||| || |||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 305 gacttcaatcggcctggtcatattttccctctgaaatacagagagggtggtgttctgaaa 364 Query: 1048 cgagctggacacactgaagcatctgttgatcttgctgtgctggctgggctacctcctgtc 1107 ||||||||||| |||||||||||||| ||||||||| || | |||||| ||||||||| Sbjct: 365 cgagctggacatactgaagcatctgtagatcttgctatgttagctgggttacctcctgct 424 Query: 1108 ggagtactctgtgagattgtggatgaggatggatccatggctcgcttacccaagctgcgc 1167 | || | ||||||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 425 gcggtcttatgtgagattgtggatgaggatgggtccatggctcgcctaccaaagctgcgc 484 Query: 1168 gtgtttgctgaaaaggaaaatttgaagattgtatcgattgctgatttgattagatatagg 1227 ||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 485 gtgtttgctgaaagggagaatttgaagattgtatccattgctgacttgattagatatagg 544 Query: 1228 agaaaaagagacaggctaattgaacgtgcatctgttgcacgcttacctttgagatggggc 1287 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 545 agaaaaagagacaggctagttgaacgttcatctgttgcacgcttacctttgagatggggt 604 Query: 1288 aatgtccatgcttactgctacagatctgttattgatgggatcgagcatatcgcaatggtg 1347 ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 605 aatgtccgcgcttactgctacagatctgttattgatgggatagagcatattgcaatggtg 664 Query: 1348 aaaggtgagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcaca 1407 ||||| ||||||||||||||||||| || | |||||||| || ||||| ||||||||| Sbjct: 665 aaaggggagattggagatggtcaaggcgttttagtgagggtgcactccgaatgcctcaca 724 Query: 1408 ggagacatttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggag 1467 || ||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 725 ggggacatttttggatcagcaagatgtgattgtggtgatcagcttgccatggcaatggag 784 Query: 1468 aggattgagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggc 1527 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 atgattgagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggt 844 Query: 1528 attggtctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtg 1587 |||||||| ||||||||||| |||||||||||| | |||||||| || || ||||||||| Sbjct: 845 attggtctcggtcacaagctccgtgcttataacctgcaagatgacgggcgcgacactgtg 904 Query: 1588 gaggctaacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacag 1647 |||||||| || || ||||||||||||||||| || |||||||||| || ||||||||| Sbjct: 905 gaggctaatgaagacctaggactgcctgtggattcacgggaatatggcattggtgcacag 964 Query: 1648 atattacgcgacctaggagtccgttcaatgaagttgatgaccaacaatcctgccaaatat 1707 |||||||| || || || ||||||||||||||||||||||| || || || || || ||| Sbjct: 965 atattacgtgatctgggggtccgttcaatgaagttgatgactaataacccagcaaagtat 1024 Query: 1708 gttggtctgaagggttatgggttgagcattgtgggtagggtgcccttggtaactccaata 1767 | |||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 1025 ggtggtctcaagggttatggattgagcattgtgggcagggttcccttggtaactccaatc 1084 Query: 1768 accactgagaatcggagatacttggagaccaaaagaacgaaaatggggcatgtata 1823 ||| | ||||||||||||||| |||| || || ||||| || |||||||||||||| Sbjct: 1085 acctcagagaatcggagatacctggaaacaaagagaacaaagatggggcatgtata 1140
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 365 bits (184), Expect = 4e-97 Identities = 289/324 (89%) Strand = Plus / Minus Query: 897 ggatgctaaagaaggcacaacgactggggtatctgcaaaggatagggcaaagacagtcat 956 |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 21952700 ggatgctaaagagggaacaacaactggggtatctgcaaaggatagggcaaagacagttat 21952641 Query: 957 gactcttgcatctcctcactcaaagcctgaagatttcaatcggccaggccatatttttcc 1016 |||||||||||| ||| |||| ||||||||||| ||||||||||| || |||||||| || Sbjct: 21952640 gactcttgcatcccctgactctaagcctgaagacttcaatcggcctggtcatattttccc 21952581 Query: 1017 tctgaagtacagagatgggggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||| |||||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 21952580 tctgaaatacagagagggtggtgttctgaaacgagctggacatactgaagcatctgtaga 21952521 Query: 1077 tcttgctgtgctggctgggctacctcctgtcggagtactctgtgagattgtggatgagga 1136 ||||||| || | |||||| ||||||||| | || | |||||||||||||||||||| Sbjct: 21952520 tcttgctatgttagctgggttacctcctgctgcggtcttatgtgagattgtggatgagga 21952461 Query: 1137 tggatccatggctcgcttacccaagctgcgcgtgtttgctgaaaaggaaaatttgaagat 1196 ||| |||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 21952460 tgggtccatggctcgcctaccaaagctgcgcgtgtttgctgaaagggagaatttgaagat 21952401 Query: 1197 tgtatcgattgctgatttgattag 1220 |||||| |||||||| |||||||| Sbjct: 21952400 tgtatccattgctgacttgattag 21952377 Score = 353 bits (178), Expect = 2e-93 Identities = 265/294 (90%) Strand = Plus / Minus Query: 1354 gagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcacaggagac 1413 ||||||||||||||||||| || | |||||||| || ||||| ||||||||||| ||| Sbjct: 21951677 gagattggagatggtcaaggcgttttagtgagggtgcactccgaatgcctcacaggggac 21951618 Query: 1414 atttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagaggatt 1473 |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |||| Sbjct: 21951617 atttttggatcagcaagatgtgattgtggtgatcagcttgccatggcaatggagatgatt 21951558 Query: 1474 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcattggt 1533 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 21951557 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggtattggt 21951498 Query: 1534 ctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggaggct 1593 || ||||||||||| |||||||||||| | |||||||| || || ||||||||||||||| Sbjct: 21951497 ctcggtcacaagctccgtgcttataacctgcaagatgacgggcgcgacactgtggaggct 21951438 Query: 1594 aacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacag 1647 || || || ||||||||||||||||| || |||||||||| || ||||||||| Sbjct: 21951437 aatgaagacctaggactgcctgtggattcacgggaatatggcattggtgcacag 21951384 Score = 230 bits (116), Expect = 2e-56 Identities = 188/212 (88%) Strand = Plus / Minus Query: 676 cttgtgattgtcgttgatgacgaatcaagagaaaatgaaggtgatcttatattggctgct 735 ||||||||||| ||||| || ||||||||||||||||| || ||||||||| |||||||| Sbjct: 21953606 cttgtgattgttgttgacgatgaatcaagagaaaatgagggagatcttataatggctgct 21953547 Query: 736 tctttggttaccccagaggctatggctttcatagtaaggcatagcacaggaattgtatgt 795 |||||||||||||||||||| ||||| || | ||||| || |||||||||| || ||| Sbjct: 21953546 tctttggttaccccagaggccatggcgtttgttgtaagatatggcacaggaatagtgtgt 21953487 Query: 796 gttagcatgaaagaagatgacctggaaagattgaaccttcctttgatggtttcaacaaag 855 ||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||| Sbjct: 21953486 gttagcatgaaagaagaggatcttgaaagattgaaccttcctttgatggttgcaacaaag 21953427 Query: 856 gagaatgaggagaagctatgcactgctttcac 887 || |||||||||||||| || ||||| ||||| Sbjct: 21953426 gaaaatgaggagaagctctgtactgcattcac 21953395 Score = 208 bits (105), Expect = 6e-50 Identities = 126/133 (94%) Strand = Plus / Minus Query: 1219 agatataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgcttacctttg 1278 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 21951922 agatataggagaaaaagagacaggctagttgaacgttcatctgttgcacgcttacctttg 21951863 Query: 1279 agatggggcaatgtccatgcttactgctacagatctgttattgatgggatcgagcatatc 1338 |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 21951862 agatggggtaatgtccgcgcttactgctacagatctgttattgatgggatagagcatatt 21951803 Query: 1339 gcaatggtgaaag 1351 ||||||||||||| Sbjct: 21951802 gcaatggtgaaag 21951790 Score = 163 bits (82), Expect = 3e-36 Identities = 154/178 (86%) Strand = Plus / Minus Query: 1646 agatattacgcgacctaggagtccgttcaatgaagttgatgaccaacaatcctgccaaat 1705 |||||||||| || || || ||||||||||||||||||||||| || || || || || | Sbjct: 21950641 agatattacgtgatctgggggtccgttcaatgaagttgatgactaataacccagcaaagt 21950582 Query: 1706 atgttggtctgaagggttatgggttgagcattgtgggtagggtgcccttggtaactccaa 1765 ||| |||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 21950581 atggtggtctcaagggttatggattgagcattgtgggcagggttcccttggtaactccaa 21950522 Query: 1766 taaccactgagaatcggagatacttggagaccaaaagaacgaaaatggggcatgtata 1823 | ||| | ||||||||||||||| |||| || || ||||| || |||||||||||||| Sbjct: 21950521 tcacctcagagaatcggagatacctggaaacaaagagaacaaagatggggcatgtata 21950464 Score = 50.1 bits (25), Expect = 0.033 Identities = 55/65 (84%) Strand = Plus / Minus Query: 611 tggatagccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaag 670 |||||||||| || ||||||||||| |||||||| ||||| || | || |||| ||||| Sbjct: 21953757 tggatagcccaactgagggcttctcgtctatttccgaggccatcaaagatattcaacaag 21953698 Query: 671 gaaaa 675 ||||| Sbjct: 21953697 gaaaa 21953693
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 365 bits (184), Expect = 4e-97 Identities = 289/324 (89%) Strand = Plus / Minus Query: 897 ggatgctaaagaaggcacaacgactggggtatctgcaaaggatagggcaaagacagtcat 956 |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1322 ggatgctaaagagggaacaacaactggggtatctgcaaaggatagggcaaagacagttat 1263 Query: 957 gactcttgcatctcctcactcaaagcctgaagatttcaatcggccaggccatatttttcc 1016 |||||||||||| ||| |||| ||||||||||| ||||||||||| || |||||||| || Sbjct: 1262 gactcttgcatcccctgactctaagcctgaagacttcaatcggcctggtcatattttccc 1203 Query: 1017 tctgaagtacagagatgggggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||| |||||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 1202 tctgaaatacagagagggtggtgttctgaaacgagctggacatactgaagcatctgtaga 1143 Query: 1077 tcttgctgtgctggctgggctacctcctgtcggagtactctgtgagattgtggatgagga 1136 ||||||| || | |||||| ||||||||| | || | |||||||||||||||||||| Sbjct: 1142 tcttgctatgttagctgggttacctcctgctgcggtcttatgtgagattgtggatgagga 1083 Query: 1137 tggatccatggctcgcttacccaagctgcgcgtgtttgctgaaaaggaaaatttgaagat 1196 ||| |||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 1082 tgggtccatggctcgcctaccaaagctgcgcgtgtttgctgaaagggagaatttgaagat 1023 Query: 1197 tgtatcgattgctgatttgattag 1220 |||||| |||||||| |||||||| Sbjct: 1022 tgtatccattgctgacttgattag 999 Score = 353 bits (178), Expect = 2e-93 Identities = 265/294 (90%) Strand = Plus / Minus Query: 1354 gagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcacaggagac 1413 ||||||||||||||||||| || | |||||||| || ||||| ||||||||||| ||| Sbjct: 299 gagattggagatggtcaaggcgttttagtgagggtgcactccgaatgcctcacaggggac 240 Query: 1414 atttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagaggatt 1473 |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |||| Sbjct: 239 atttttggatcagcaagatgtgattgtggtgatcagcttgccatggcaatggagatgatt 180 Query: 1474 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcattggt 1533 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 179 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggtattggt 120 Query: 1534 ctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggaggct 1593 || ||||||||||| |||||||||||| | |||||||| || || ||||||||||||||| Sbjct: 119 ctcggtcacaagctccgtgcttataacctgcaagatgacgggcgcgacactgtggaggct 60 Query: 1594 aacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacag 1647 || || || ||||||||||||||||| || |||||||||| || ||||||||| Sbjct: 59 aatgaagacctaggactgcctgtggattcacgggaatatggcattggtgcacag 6 Score = 230 bits (116), Expect = 2e-56 Identities = 188/212 (88%) Strand = Plus / Minus Query: 676 cttgtgattgtcgttgatgacgaatcaagagaaaatgaaggtgatcttatattggctgct 735 ||||||||||| ||||| || ||||||||||||||||| || ||||||||| |||||||| Sbjct: 2228 cttgtgattgttgttgacgatgaatcaagagaaaatgagggagatcttataatggctgct 2169 Query: 736 tctttggttaccccagaggctatggctttcatagtaaggcatagcacaggaattgtatgt 795 |||||||||||||||||||| ||||| || | ||||| || |||||||||| || ||| Sbjct: 2168 tctttggttaccccagaggccatggcgtttgttgtaagatatggcacaggaatagtgtgt 2109 Query: 796 gttagcatgaaagaagatgacctggaaagattgaaccttcctttgatggtttcaacaaag 855 ||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||| Sbjct: 2108 gttagcatgaaagaagaggatcttgaaagattgaaccttcctttgatggttgcaacaaag 2049 Query: 856 gagaatgaggagaagctatgcactgctttcac 887 || |||||||||||||| || ||||| ||||| Sbjct: 2048 gaaaatgaggagaagctctgtactgcattcac 2017 Score = 208 bits (105), Expect = 6e-50 Identities = 126/133 (94%) Strand = Plus / Minus Query: 1219 agatataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgcttacctttg 1278 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 544 agatataggagaaaaagagacaggctagttgaacgttcatctgttgcacgcttacctttg 485 Query: 1279 agatggggcaatgtccatgcttactgctacagatctgttattgatgggatcgagcatatc 1338 |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 484 agatggggtaatgtccgcgcttactgctacagatctgttattgatgggatagagcatatt 425 Query: 1339 gcaatggtgaaag 1351 ||||||||||||| Sbjct: 424 gcaatggtgaaag 412 Score = 50.1 bits (25), Expect = 0.033 Identities = 55/65 (84%) Strand = Plus / Minus Query: 611 tggatagccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaag 670 |||||||||| || ||||||||||| |||||||| ||||| || | || |||| ||||| Sbjct: 2379 tggatagcccaactgagggcttctcgtctatttccgaggccatcaaagatattcaacaag 2320 Query: 671 gaaaa 675 ||||| Sbjct: 2319 gaaaa 2315
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 353 bits (178), Expect = 2e-93 Identities = 265/294 (90%) Strand = Plus / Minus Query: 1354 gagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcacaggagac 1413 ||||||||||||||||||| || | |||||||| || ||||| ||||||||||| ||| Sbjct: 134962 gagattggagatggtcaaggcgttttagtgagggtgcactccgaatgcctcacaggggac 134903 Query: 1414 atttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagaggatt 1473 |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |||| Sbjct: 134902 atttttggatcagcaagatgtgattgtggtgatcagcttgccatggcaatggagatgatt 134843 Query: 1474 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcattggt 1533 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134842 gagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggtattggt 134783 Query: 1534 ctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggaggct 1593 || ||||||||||| |||||||||||| | |||||||| || || ||||||||||||||| Sbjct: 134782 ctcggtcacaagctccgtgcttataacctgcaagatgacgggcgcgacactgtggaggct 134723 Query: 1594 aacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacag 1647 || || || ||||||||||||||||| || |||||||||| || ||||||||| Sbjct: 134722 aatgaagacctaggactgcctgtggattcacgggaatatggcattggtgcacag 134669 Score = 208 bits (105), Expect = 6e-50 Identities = 126/133 (94%) Strand = Plus / Minus Query: 1219 agatataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgcttacctttg 1278 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 135207 agatataggagaaaaagagacaggctagttgaacgttcatctgttgcacgcttacctttg 135148 Query: 1279 agatggggcaatgtccatgcttactgctacagatctgttattgatgggatcgagcatatc 1338 |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135147 agatggggtaatgtccgcgcttactgctacagatctgttattgatgggatagagcatatt 135088 Query: 1339 gcaatggtgaaag 1351 ||||||||||||| Sbjct: 135087 gcaatggtgaaag 135075 Score = 163 bits (82), Expect = 3e-36 Identities = 154/178 (86%) Strand = Plus / Minus Query: 1646 agatattacgcgacctaggagtccgttcaatgaagttgatgaccaacaatcctgccaaat 1705 |||||||||| || || || ||||||||||||||||||||||| || || || || || | Sbjct: 133926 agatattacgtgatctgggggtccgttcaatgaagttgatgactaataacccagcaaagt 133867 Query: 1706 atgttggtctgaagggttatgggttgagcattgtgggtagggtgcccttggtaactccaa 1765 ||| |||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 133866 atggtggtctcaagggttatggattgagcattgtgggcagggttcccttggtaactccaa 133807 Query: 1766 taaccactgagaatcggagatacttggagaccaaaagaacgaaaatggggcatgtata 1823 | ||| | ||||||||||||||| |||| || || ||||| || |||||||||||||| Sbjct: 133806 tcacctcagagaatcggagatacctggaaacaaagagaacaaagatggggcatgtata 133749 Score = 151 bits (76), Expect = 1e-32 Identities = 97/104 (93%) Strand = Plus / Minus Query: 1117 tgtgagattgtggatgaggatggatccatggctcgcttacccaagctgcgcgtgtttgct 1176 ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct: 135765 tgtgagattgtggatgaggatgggtccatggctcgcctaccaaagctgcgcgtgtttgct 135706 Query: 1177 gaaaaggaaaatttgaagattgtatcgattgctgatttgattag 1220 |||| ||| ||||||||||||||||| |||||||| |||||||| Sbjct: 135705 gaaagggagaatttgaagattgtatccattgctgacttgattag 135662
>gb|AY104857.1| Zea mays PCO090014 mRNA sequence Length = 1209 Score = 295 bits (149), Expect = 3e-76 Identities = 275/317 (86%) Strand = Plus / Plus Query: 1507 cgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaa 1566 |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 537 cgtggacatgaaggaaggggtattggtctgggccacaagcttcgtgcttataacttacag 596 Query: 1567 gatgatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagg 1626 |||||||| ||||| |||||||| |||||||||||||| || || ||||||||||| || Sbjct: 597 gatgatgggcgtgatactgtggaagctaacgaggaacttggtcttcctgtggactcacgg 656 Query: 1627 gaatatgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatg 1686 ||||||||||| || ||||||||||| || || ||||||||||||||||||||| ||||| Sbjct: 657 gaatatgggattggcgcacagatattgcgggatctaggagtccgttcaatgaagctgatg 716 Query: 1687 accaacaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggtagg 1746 || || || ||||| |||||| |||||| ||||| ||||| |||||||||| ||| ||| Sbjct: 717 actaataaccctgcgaaatatagtggtctcaagggctatggattgagcattgcgggcagg 776 Query: 1747 gtgcccttggtaactccaataaccactgagaatcggagatacttggagaccaaaagaacg 1806 ||||||||| | || ||||| |||| |||||| || || ||| ||||||| |||||||| Sbjct: 777 gtgcccttgattacgccaattaccagtgagaaccgtaggtacctggagactaaaagaaca 836 Query: 1807 aaaatggggcatgtata 1823 || ||||| |||||||| Sbjct: 837 aagatgggacatgtata 853 Score = 289 bits (146), Expect = 2e-74 Identities = 230/258 (89%) Strand = Plus / Plus Query: 1222 tataggagaaaaagagacaggctaattgaacgtgcatctgttgcacgcttacctttgaga 1281 |||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||| | Sbjct: 253 tataggaggaaaagagacaggctaattgaacgcgcttctgttgcacgcttgcctttgaaa 312 Query: 1282 tggggcaatgtccatgcttactgctacagatctgttattgatgggatcgagcatatcgca 1341 ||||||||||||||||| || ||||||| ||||||||||||||| || |||||||| || Sbjct: 313 tggggcaatgtccatgcctattgctacaaatctgttattgatggcattgagcatattgcc 372 Query: 1342 atggtgaaaggtgagattggagatggtcaagatattcttgtgagggtccattccgagtgc 1401 |||||||||||||| ||||| || || ||||| ||| | |||||||| || || |||||| Sbjct: 373 atggtgaaaggtgatattggtgacggccaagacattttggtgagggtgcactctgagtgc 432 Query: 1402 ctcacaggagacatttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtca 1461 |||||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| || Sbjct: 433 ctcacaggcgacatttttggatccgcaagatgtgattgtggcgaccagcttgcgatggca 492 Query: 1462 atggagaggattgagaag 1479 ||||||| |||||||||| Sbjct: 493 atggagatgattgagaag 510 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1474 gagaaggctggaaggggtgtactagt 1499 ||||||||||||||||||||| |||| Sbjct: 536 gagaaggctggaaggggtgtattagt 511
>dbj|AK241452.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065163N15, full insert sequence Length = 2068 Score = 281 bits (142), Expect = 5e-72 Identities = 403/490 (82%) Strand = Plus / Plus Query: 616 agccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaaggaaaa 675 ||||| || ||||| |||||||| ||| | || ||||||||||| ||||| ||||||||| Sbjct: 550 agcccaactgagggtttctcatccattcctgaagctattgaggatattcgccaaggaaaa 609 Query: 676 cttgtgattgtcgttgatgacgaatcaagagaaaatgaaggtgatcttatattggctgct 735 ||||||||| || || || ||| ||||| |||||||| ||||||||| |||| || Sbjct: 610 tatgtgattgttgtggacgatgaagatagagagaatgaaggagatcttataatggcagca 669 Query: 736 tctttggttaccccagaggctatggctttcatagtaaggcatagcacaggaattgtatgt 795 || ||| || || |||||||||||||||||||| |||||| | ||||| ||||||||| Sbjct: 670 tcaaaggtgacacctgaggctatggctttcatagtgaggcatgggacaggcattgtatgt 729 Query: 796 gttagcatgaaagaagatgacctggaaagattgaaccttcctttgatggtttcaacaaag 855 || ||||||||||||||||||||||||||| | | |||||| | ||||| |||||||| Sbjct: 730 gtcagcatgaaagaagatgacctggaaagactagaacttcctcttatggtgacaacaaag 789 Query: 856 gagaatgaggagaagctatgcactgctttcaccattactgtggatgctaaagaaggcaca 915 || ||||| |||||||| | ||||| ||||| || | ||||||||||||||||||||| Sbjct: 790 gaaaatgaagagaagctgcggactgccttcactgtttcagtggatgctaaagaaggcaca 849 Query: 916 acgactggggtatctgcaaaggatagggcaaagacagtcatgactcttgcatctcctcac 975 || || ||||| || || |||||| ||||||| |||||| | | |||||||||||| | Sbjct: 850 acaacaggggtttcagctaaggatcgggcaaatacagtcttagcacttgcatctcctaat 909 Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 || ||||||||||| ||||| ||||||| |||||||||||||| || || ||||| || Sbjct: 910 tctaagcctgaagacttcaacaggccaggacatatttttcctcttaaatatagagaagga 969 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctggg 1095 ||||| || ||| | ||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 970 ggtgtgctgaaaagggctgggcatactgaagcatcagttgaccttgccatgttggctggg 1029 Query: 1096 ctacctcctg 1105 ||||||||| Sbjct: 1030 ttacctcctg 1039 Score = 192 bits (97), Expect = 4e-45 Identities = 388/485 (80%) Strand = Plus / Plus Query: 1298 cttactgctacagatctgttattgatgggatcgagcatatcgcaatggtgaaaggtgaga 1357 |||| |||||| ||||| ||||||||||||| ||||| || || ||||| || ||||| Sbjct: 1235 cttattgctaccgatctcttattgatgggatggagcacattgctatggtcaagggtgatg 1294 Query: 1358 ttggagatggtcaagatattcttgtgagggtccattccgagtgcctcacaggagacattt 1417 |||| ||||| || ||||| | ||| | || ||||| |||||||| || ||||| || | Sbjct: 1295 ttggtgatggccaggatatcttagtgcgagtgcattcggagtgcctaactggagatatat 1354 Query: 1418 ttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagaggattgaga 1477 |||||||||| || ||||||||||| | || ||||| || ||||| | |||||||| Sbjct: 1355 ttggatcagccaggtgtgattgtgggaatcaacttgccctggcaatgaccatgattgaga 1414 Query: 1478 aggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcattggtctgg 1537 || |||| ||||||||| ||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 1415 agactggcaggggtgtagtagtttaccttcgtggacatgaaggtaggggcattggtttgg 1474 Query: 1538 gtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggaggctaacg 1597 |||||||||||||||| || || || || || ||||| || || ||||| |||||||| | Sbjct: 1475 gtcacaagcttcgtgcatacaatttgcaggacgatgggcgggatactgttgaggctaatg 1534 Query: 1598 aggaactaggactgcctgtggactcgagggaatatgggatcggtgcacagatattacgcg 1657 |||| ||||| ||||| || || || | || || || || |||||||||||| |||| | Sbjct: 1535 aggatctaggtctgccggttgattcacgagagtacggtattggtgcacagatactacgag 1594 Query: 1658 acctaggagtccgttcaatgaagttgatgaccaacaatcctgccaaatatgttggtctga 1717 | || || ||||| | |||| | | ||||| ||||||||||| |||||| ||| |||| Sbjct: 1595 atcttggtgtccgaaccatgaggcttatgactaacaatcctgcgaaatatactggactga 1654 Query: 1718 agggttatgggttgagcattgtgggtagggtgcccttggtaactccaataaccactgaga 1777 |||| ||||| ||||| | |||| || ||||| || | || |||||||||| ||||| Sbjct: 1655 agggctatggtttgagtgtcttgggcagagtgccactgttgacaccaataaccaatgaga 1714 Query: 1778 atcgg 1782 ||||| Sbjct: 1715 atcgg 1719
>gb|AF403706.1| Malus x domestica GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase mRNA, complete cds Length = 2011 Score = 157 bits (79), Expect = 2e-34 Identities = 325/407 (79%) Strand = Plus / Plus Query: 1321 gatgggatcgagcatatcgcaatggtgaaaggtgagattggagatggtcaagatattctt 1380 |||||||| ||||| || || ||||| |||||||| |||| || || ||||| || ||| Sbjct: 1077 gatgggattgagcacattgctatggttaaaggtgaaattgctgacgggcaagaaatactt 1136 Query: 1381 gtgagggtccattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgt 1440 |||||||| || || ||||||||||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 1137 gtgagggtacactctgagtgcctcactggtgacatatttgggtcagccagatgtgactgt 1196 Query: 1441 ggtgaccagcttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtt 1500 || ||||||||||| | ||||| || ||||| ||||| |||||||| | || Sbjct: 1197 ggaaaccagcttgcacttgcaatgaagcaaattgaagcagctggtaggggtgttttggtg 1256 Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| |||||||||||||| || || |||||| ||||||||||||| || ||||||| Sbjct: 1257 tatctccgtggacatgaaggtagaggaattggtttgggtcacaagctccgagcttataca 1316 Query: 1561 ttacaagatgatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggac 1620 | || |||| ||| ||||||||||| || ||||| ||||| || ||| | ||||| || Sbjct: 1317 ctgcaggatgctgggcgtgacactgttgaagctaatgaggagctgggattacctgttgat 1376 Query: 1621 tcgagggaatatgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaag 1680 || | || ||||| || |||||||||||| |||| || ||||| || || | |||||| Sbjct: 1377 tctcgcgagtatggcataggtgcacagatactacgagatctaggtgttcgaacgatgaag 1436 Query: 1681 ttgatgaccaacaatcctgccaaatatgttggtctgaagggttatgg 1727 ||||||| ||||||||||| |||||| |||| || ||||||||||| Sbjct: 1437 ctgatgactaacaatcctgcaaaatatattggcctcaagggttatgg 1483 Score = 95.6 bits (48), Expect = 6e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 982 cctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatgggggtgtt 1041 |||||||||||||| || ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 738 cctgaagatttcaaccgcccaggacatatctttcccctaaagtacagagagggaggagtt 797 Query: 1042 ctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctgggct 1097 || ||| |||| || ||||||||||| || |||||||||||| || |||||||||| Sbjct: 798 ctaaaaagagccggtcacactgaagcttcagttgatcttgctatgttggctgggct 853 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1183 gaaaatttgaagattgtatcgattgctgatttgattagatataggagaaaaagaga 1238 ||||| ||||| ||||| || |||||||||||||| |||||||| || |||||||| Sbjct: 939 gaaaacttgaaaattgtttccattgctgatttgataagatatagaaggaaaagaga 994 Score = 46.1 bits (23), Expect = 0.52 Identities = 50/59 (84%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggc 761 ||||||||||| || ||||||||| |||| ||||| |||| || ||||| |||||||| Sbjct: 465 agagaaaatgagggagatcttataatggcagcttccttggcaacaccagaagctatggc 523
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 151 bits (76), Expect = 1e-32 Identities = 187/224 (83%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| |||||||| || ||||| || ||||||||||| || ||||||||||| | || Sbjct: 23825184 cattcggagtgcctaactggagatatatttggatcagccaggtgtgattgtgggaatcaa 23825243 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 ||||| || ||||| | |||||||||| |||| ||||||||| ||||||| |||||| Sbjct: 23825244 cttgccctggcaatgaccatgattgagaagactggcaggggtgtagtagtttaccttcgt 23825303 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| |||||||||||| ||||||||||||||||||| || || || || || Sbjct: 23825304 ggacatgaaggtaggggcattggtttgggtcacaagcttcgtgcatacaatttgcaggac 23825363 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcc 1613 ||||| || || ||||| |||||||| ||||| ||||| ||||| Sbjct: 23825364 gatgggcgggatactgttgaggctaatgaggatctaggtctgcc 23825407 Score = 137 bits (69), Expect = 2e-28 Identities = 174/209 (83%) Strand = Plus / Plus Query: 897 ggatgctaaagaaggcacaacgactggggtatctgcaaaggatagggcaaagacagtcat 956 ||||||||||||||||||||| || ||||| || || |||||| ||||||| |||||| | Sbjct: 23823983 ggatgctaaagaaggcacaacaacaggggtttcagctaaggatcgggcaaatacagtctt 23824042 Query: 957 gactcttgcatctcctcactcaaagcctgaagatttcaatcggccaggccatatttttcc 1016 | |||||||||||| | || ||||||||||| ||||| ||||||| ||||||||||| Sbjct: 23824043 agcacttgcatctcctaattctaagcctgaagacttcaacaggccaggacatatttttcc 23824102 Query: 1017 tctgaagtacagagatgggggtgttctcaaacgagctggacacactgaagcatctgttga 1076 ||| || || ||||| || ||||| || ||| | ||||| || ||||||||||| ||||| Sbjct: 23824103 tcttaaatatagagaaggaggtgtgctgaaaagggctgggcatactgaagcatcagttga 23824162 Query: 1077 tcttgctgtgctggctgggctacctcctg 1105 ||||| || |||||||| ||||||||| Sbjct: 23824163 ccttgccatgttggctgggttacctcctg 23824191 Score = 131 bits (66), Expect = 1e-26 Identities = 144/170 (84%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 ||||| |||||||| ||||||||| |||| || || ||| || || |||||||||||| Sbjct: 23823426 agagagaatgaaggagatcttataatggcagcatcaaaggtgacacctgaggctatggct 23823485 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaagaagatgacctggaa 822 |||||||| |||||| | ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 23823486 ttcatagtgaggcatgggacaggcattgtatgtgtcagcatgaaagaagatgacctggaa 23823545 Query: 823 agattgaaccttcctttgatggtttcaacaaaggagaatgaggagaagct 872 ||| | | |||||| | ||||| |||||||||| ||||| |||||||| Sbjct: 23823546 agactagaacttcctcttatggtgacaacaaaggaaaatgaagagaagct 23823595 Score = 48.1 bits (24), Expect = 0.13 Identities = 51/60 (85%) Strand = Plus / Plus Query: 616 agccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaaggaaaa 675 ||||| || ||||| |||||||| ||| | || ||||||||||| ||||| ||||||||| Sbjct: 23823248 agcccaactgagggtttctcatccattcctgaagctattgaggatattcgccaaggaaaa 23823307 Score = 46.1 bits (23), Expect = 0.52 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1684 atgaccaacaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggt 1743 ||||| ||||||||||| |||||| ||| |||||||| ||||| ||||| | |||| Sbjct: 23825586 atgactaacaatcctgcgaaatatactggactgaagggctatggtttgagtgtcttgggc 23825645 Query: 1744 agggtgcccttggtaactccaataaccactgagaatcgg 1782 || ||||| || | || |||||||||| |||||||||| Sbjct: 23825646 agagtgccactgttgacaccaataaccaatgagaatcgg 23825684 Score = 42.1 bits (21), Expect = 8.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1298 cttactgctacagatctgttattgatgggatcgagca 1334 |||| |||||| ||||| ||||||||||||| ||||| Sbjct: 23824725 cttattgctaccgatctcttattgatgggatggagca 23824761
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 151 bits (76), Expect = 1e-32 Identities = 187/224 (83%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| |||||||| || ||||| || ||||||||||| || ||||||||||| | || Sbjct: 114384 cattcggagtgcctaactggagatatatttggatcagccaggtgtgattgtgggaatcaa 114443 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 ||||| || ||||| | |||||||||| |||| ||||||||| ||||||| |||||| Sbjct: 114444 cttgccctggcaatgaccatgattgagaagactggcaggggtgtagtagtttaccttcgt 114503 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| |||||||||||| ||||||||||||||||||| || || || || || Sbjct: 114504 ggacatgaaggtaggggcattggtttgggtcacaagcttcgtgcatacaatttgcaggac 114563 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcc 1613 ||||| || || ||||| |||||||| ||||| ||||| ||||| Sbjct: 114564 gatgggcgggatactgttgaggctaatgaggatctaggtctgcc 114607 Score = 137 bits (69), Expect = 2e-28 Identities = 174/209 (83%) Strand = Plus / Plus Query: 897 ggatgctaaagaaggcacaacgactggggtatctgcaaaggatagggcaaagacagtcat 956 ||||||||||||||||||||| || ||||| || || |||||| ||||||| |||||| | Sbjct: 113183 ggatgctaaagaaggcacaacaacaggggtttcagctaaggatcgggcaaatacagtctt 113242 Query: 957 gactcttgcatctcctcactcaaagcctgaagatttcaatcggccaggccatatttttcc 1016 | |||||||||||| | || ||||||||||| ||||| ||||||| ||||||||||| Sbjct: 113243 agcacttgcatctcctaattctaagcctgaagacttcaacaggccaggacatatttttcc 113302 Query: 1017 tctgaagtacagagatgggggtgttctcaaacgagctggacacactgaagcatctgttga 1076 ||| || || ||||| || ||||| || ||| | ||||| || ||||||||||| ||||| Sbjct: 113303 tcttaaatatagagaaggaggtgtgctgaaaagggctgggcatactgaagcatcagttga 113362 Query: 1077 tcttgctgtgctggctgggctacctcctg 1105 ||||| || |||||||| ||||||||| Sbjct: 113363 ccttgccatgttggctgggttacctcctg 113391 Score = 131 bits (66), Expect = 1e-26 Identities = 144/170 (84%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 ||||| |||||||| ||||||||| |||| || || ||| || || |||||||||||| Sbjct: 112626 agagagaatgaaggagatcttataatggcagcatcaaaggtgacacctgaggctatggct 112685 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaagaagatgacctggaa 822 |||||||| |||||| | ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 112686 ttcatagtgaggcatgggacaggcattgtatgtgtcagcatgaaagaagatgacctggaa 112745 Query: 823 agattgaaccttcctttgatggtttcaacaaaggagaatgaggagaagct 872 ||| | | |||||| | ||||| |||||||||| ||||| |||||||| Sbjct: 112746 agactagaacttcctcttatggtgacaacaaaggaaaatgaagagaagct 112795 Score = 48.1 bits (24), Expect = 0.13 Identities = 51/60 (85%) Strand = Plus / Plus Query: 616 agccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaaggaaaa 675 ||||| || ||||| |||||||| ||| | || ||||||||||| ||||| ||||||||| Sbjct: 112448 agcccaactgagggtttctcatccattcctgaagctattgaggatattcgccaaggaaaa 112507 Score = 46.1 bits (23), Expect = 0.52 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1684 atgaccaacaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggt 1743 ||||| ||||||||||| |||||| ||| |||||||| ||||| ||||| | |||| Sbjct: 114786 atgactaacaatcctgcgaaatatactggactgaagggctatggtttgagtgtcttgggc 114845 Query: 1744 agggtgcccttggtaactccaataaccactgagaatcgg 1782 || ||||| || | || |||||||||| |||||||||| Sbjct: 114846 agagtgccactgttgacaccaataaccaatgagaatcgg 114884 Score = 42.1 bits (21), Expect = 8.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1298 cttactgctacagatctgttattgatgggatcgagca 1334 |||| |||||| ||||| ||||||||||||| ||||| Sbjct: 113925 cttattgctaccgatctcttattgatgggatggagca 113961
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 151 bits (76), Expect = 1e-32 Identities = 187/224 (83%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| |||||||| || ||||| || ||||||||||| || ||||||||||| | || Sbjct: 16888 cattcggagtgcctaactggagatatatttggatcagccaggtgtgattgtgggaatcaa 16947 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 ||||| || ||||| | |||||||||| |||| ||||||||| ||||||| |||||| Sbjct: 16948 cttgccctggcaatgaccatgattgagaagactggcaggggtgtagtagtttaccttcgt 17007 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| |||||||||||| ||||||||||||||||||| || || || || || Sbjct: 17008 ggacatgaaggtaggggcattggtttgggtcacaagcttcgtgcatacaatttgcaggac 17067 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcc 1613 ||||| || || ||||| |||||||| ||||| ||||| ||||| Sbjct: 17068 gatgggcgggatactgttgaggctaatgaggatctaggtctgcc 17111 Score = 137 bits (69), Expect = 2e-28 Identities = 174/209 (83%) Strand = Plus / Plus Query: 897 ggatgctaaagaaggcacaacgactggggtatctgcaaaggatagggcaaagacagtcat 956 ||||||||||||||||||||| || ||||| || || |||||| ||||||| |||||| | Sbjct: 15687 ggatgctaaagaaggcacaacaacaggggtttcagctaaggatcgggcaaatacagtctt 15746 Query: 957 gactcttgcatctcctcactcaaagcctgaagatttcaatcggccaggccatatttttcc 1016 | |||||||||||| | || ||||||||||| ||||| ||||||| ||||||||||| Sbjct: 15747 agcacttgcatctcctaattctaagcctgaagacttcaacaggccaggacatatttttcc 15806 Query: 1017 tctgaagtacagagatgggggtgttctcaaacgagctggacacactgaagcatctgttga 1076 ||| || || ||||| || ||||| || ||| | ||||| || ||||||||||| ||||| Sbjct: 15807 tcttaaatatagagaaggaggtgtgctgaaaagggctgggcatactgaagcatcagttga 15866 Query: 1077 tcttgctgtgctggctgggctacctcctg 1105 ||||| || |||||||| ||||||||| Sbjct: 15867 ccttgccatgttggctgggttacctcctg 15895 Score = 131 bits (66), Expect = 1e-26 Identities = 144/170 (84%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 ||||| |||||||| ||||||||| |||| || || ||| || || |||||||||||| Sbjct: 15130 agagagaatgaaggagatcttataatggcagcatcaaaggtgacacctgaggctatggct 15189 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaagaagatgacctggaa 822 |||||||| |||||| | ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 15190 ttcatagtgaggcatgggacaggcattgtatgtgtcagcatgaaagaagatgacctggaa 15249 Query: 823 agattgaaccttcctttgatggtttcaacaaaggagaatgaggagaagct 872 ||| | | |||||| | ||||| |||||||||| ||||| |||||||| Sbjct: 15250 agactagaacttcctcttatggtgacaacaaaggaaaatgaagagaagct 15299 Score = 48.1 bits (24), Expect = 0.13 Identities = 51/60 (85%) Strand = Plus / Plus Query: 616 agccctaccgagggcttctcatctatttcagaggctattgaggacattcgacaaggaaaa 675 ||||| || ||||| |||||||| ||| | || ||||||||||| ||||| ||||||||| Sbjct: 14952 agcccaactgagggtttctcatccattcctgaagctattgaggatattcgccaaggaaaa 15011 Score = 46.1 bits (23), Expect = 0.52 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1684 atgaccaacaatcctgccaaatatgttggtctgaagggttatgggttgagcattgtgggt 1743 ||||| ||||||||||| |||||| ||| |||||||| ||||| ||||| | |||| Sbjct: 17290 atgactaacaatcctgcgaaatatactggactgaagggctatggtttgagtgtcttgggc 17349 Query: 1744 agggtgcccttggtaactccaataaccactgagaatcgg 1782 || ||||| || | || |||||||||| |||||||||| Sbjct: 17350 agagtgccactgttgacaccaataaccaatgagaatcgg 17388 Score = 42.1 bits (21), Expect = 8.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1298 cttactgctacagatctgttattgatgggatcgagca 1334 |||| |||||| ||||| ||||||||||||| ||||| Sbjct: 16429 cttattgctaccgatctcttattgatgggatggagca 16465
>emb|AJ002298.1|LEAJ2298 Lycopersicon esculentum mRNA for GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase Length = 1844 Score = 109 bits (55), Expect = 4e-20 Identities = 184/227 (81%) Strand = Plus / Plus Query: 1360 ggagatggtcaagatattcttgtgagggtccattccgagtgcctcacaggagacattttt 1419 |||||||| |||||||||||||| |||| || || || |||||||||||||| || ||| Sbjct: 1135 ggagatggacaagatattcttgttcgggtacactcggaatgcctcacaggagatatattt 1194 Query: 1420 ggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagaggattgagaag 1479 || ||||| |||||||| ||||| |||||| |||| ||||| || |||||| Sbjct: 1195 ggttcagccagatgtgactgtggatcccagctggcaactgcaatgaagcaaattgaggct 1254 Query: 1480 gctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcattggtctgggt 1539 ||||| ||||| || | ||||| || || || ||||| || || ||||||||| ||||| Sbjct: 1255 gctggcaggggggttttggtttacctccgcggtcatgatggtagaggcattggtttgggt 1314 Query: 1540 cacaagcttcgtgcttataacttacaagatgatggacgtgacactgt 1586 ||||| |||||||||||||| |||||||||| ||||||||| ||||| Sbjct: 1315 cacaaacttcgtgcttataatttacaagatgctggacgtgatactgt 1361 Score = 99.6 bits (50), Expect = 4e-17 Identities = 143/174 (82%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||||||||| ||||||||||| || || ||||| |||||| |||| ||||| || || Sbjct: 751 tcaaagcctgaggatttcaatcgaccgggacatatctttcctttgaaatacagggaaggc 810 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctggg 1095 || ||| | |||||||||||||| ||||| || ||||| |||||||| ||| | ||||| Sbjct: 811 ggggttttaaaacgagctggacatactgaggcttctgtggatcttgccgtgttagctggc 870 Query: 1096 ctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggct 1149 || ||||| |||||| | |||||| |||||||||| ||||| ||||||||| Sbjct: 871 ttagaccctgttggagtaatatgtgaggttgtggatgatgatggttccatggct 924 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Plus Query: 646 gaggctattgaggacattcgacaaggaaa 674 |||||||||||||||||||| |||||||| Sbjct: 421 gaggctattgaggacattcgccaaggaaa 449
>ref|NM_125826.4| Arabidopsis thaliana ATGCH; 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II (ATGCH) mRNA, complete cds Length = 2059 Score = 107 bits (54), Expect = 2e-19 Identities = 144/174 (82%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||||||||| ||||||||||| ||||| ||||| || || |||||||| | || || Sbjct: 782 tcaaagcctgaggatttcaatcgtccaggtcatatcttcccactgaagtatcgggaaggt 841 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctggg 1095 || ||||| ||| | ||||||||||||||||||||||||||||| |||| | ||||| Sbjct: 842 ggggttctgaaaagggctggacacactgaagcatctgttgatctcactgttttagctgga 901 Query: 1096 ctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggct 1149 || |||||| |||||||| ||||| ||||| ||||| ||||| ||||||||| Sbjct: 902 ctggatcctgttggagtactttgtgaaattgttgatgatgatggttccatggct 955 Score = 107 bits (54), Expect = 2e-19 Identities = 312/398 (78%) Strand = Plus / Plus Query: 1330 gagcatatcgcaatggtgaaaggtgagattggagatggtcaagatattcttgtgagggtc 1389 ||||| || |||||||| || ||||||||||| || |||||||| ||||| |||||||| Sbjct: 1136 gagcacatagcaatggttaagggtgagattggtgacggtcaagacattctcgtgagggtt 1195 Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| || || || ||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1196 cattctgaatgtctaacaggggacatatttgggtctgcaaggtgtgattgcgggaaccag 1255 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 || ||| | || ||| || ||| ||| |||| | ||||| || ||||| || ||| Sbjct: 1256 ctagcactctcgatgcagcagatcgaggctactggtcgcggtgtgctggtttacctacgt 1315 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| || || || ||| | || ||||||||||| ||||| || | |||||| Sbjct: 1316 ggacatgaaggaagagggatcggtttaggacacaagcttcgagcttacaatctgcaagat 1375 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagggaa 1629 | ||| || ||||| || || ||||| |||||| ||||||| ||||| || || || || Sbjct: 1376 gctggtcgagacacggttgaagctaatgaggaattaggacttcctgttgattctagagag 1435 Query: 1630 tatgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatgacc 1689 ||||| || |||||||||||| || | || |||| || | |||||||| ||||||| Sbjct: 1436 tatggaattggtgcacagataataagggatttaggtgttaggacaatgaagctgatgaca 1495 Query: 1690 aacaatcctgccaaatatgttggtctgaagggttatgg 1727 || ||||| || || ||||||||| ||||||| ||||| Sbjct: 1496 aataatcccgcaaagtatgttggtttgaagggatatgg 1533 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 793 tgtgttagcatgaaagaagatgacctggaaagattgaaccttcct 837 ||||| ||||||||||||||||| || || || ||| |||||||| Sbjct: 599 tgtgtgagcatgaaagaagatgatctcgagaggttgcaccttcct 643
>gb|AY142545.1| Arabidopsis thaliana clone RAFL07-09-K24 (R10865) mRNA sequence Length = 2578 Score = 107 bits (54), Expect = 2e-19 Identities = 312/398 (78%) Strand = Plus / Plus Query: 1330 gagcatatcgcaatggtgaaaggtgagattggagatggtcaagatattcttgtgagggtc 1389 ||||| || |||||||| || ||||||||||| || |||||||| ||||| |||||||| Sbjct: 1642 gagcacatagcaatggttaagggtgagattggtgacggtcaagacattctcgtgagggtt 1701 Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| || || || ||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 1702 cattctgaatgtctaacaggggacatatttgggtctgcaaggtgtgattgcgggaaccag 1761 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 || ||| | || ||| || ||| ||| |||| | ||||| || ||||| || ||| Sbjct: 1762 ctagcactctcgatgcagcagatcgaggctactggtcgcggtgtgctggtttacctacgt 1821 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| || || || ||| | || ||||||||||| ||||| || | |||||| Sbjct: 1822 ggacatgaaggaagagggatcggtttaggacacaagcttcgagcttacaatctgcaagat 1881 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagggaa 1629 | ||| || ||||| || || ||||| |||||| ||||||| ||||| || || || || Sbjct: 1882 gctggtcgagacacggttgaagctaatgaggaattaggacttcctgttgattctagagag 1941 Query: 1630 tatgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatgacc 1689 ||||| || |||||||||||| || | || |||| || | |||||||| ||||||| Sbjct: 1942 tatggaattggtgcacagataataagggatttaggtgttaggacaatgaagctgatgaca 2001 Query: 1690 aacaatcctgccaaatatgttggtctgaagggttatgg 1727 || ||||| || || ||||||||| ||||||| ||||| Sbjct: 2002 aataatcccgcaaagtatgttggtttgaagggatatgg 2039
>emb|AJ000053.1|ATAJ0053 Arabidopsis thaliana ribA gene Length = 2985 Score = 107 bits (54), Expect = 2e-19 Identities = 144/174 (82%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||||||||| ||||||||||| ||||| ||||| || || |||||||| | || || Sbjct: 1446 tcaaagcctgaggatttcaatcgtccaggtcatatcttcccactgaagtatcgggaaggt 1505 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctggg 1095 || ||||| ||| | ||||||||||||||||||||||||||||| |||| | ||||| Sbjct: 1506 ggggttctgaaaagggctggacacactgaagcatctgttgatctcactgttttagctgga 1565 Query: 1096 ctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggct 1149 || |||||| |||||||| ||||| ||||| ||||| ||||| ||||||||| Sbjct: 1566 ctggatcctgttggagtactttgtgaaattgttgatgatgatggttccatggct 1619 Score = 77.8 bits (39), Expect = 1e-10 Identities = 237/303 (78%) Strand = Plus / Plus Query: 1351 ggtgagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcacagga 1410 ||||||||||| || |||||||| ||||| ||||| || ||||| || || || ||||| Sbjct: 2003 ggtgagattggtgacggtcaagacattctcgtgagagttcattctgaatgtctaacaggg 2062 Query: 1411 gacatttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagagg 1470 ||||| ||||| || ||||| |||||||| || ||||||| ||| | || ||| || | Sbjct: 2063 gacatatttgggtctgcaaggtgtgattgcgggaaccagctagcactctcgatgcagcag 2122 Query: 1471 attgagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcatt 1530 || ||| |||| | ||||| || ||||| || |||||||||||||| || || || Sbjct: 2123 atcgaggctactggtcgcggtgtgctggtttacctacgtggacatgaaggaagagggatc 2182 Query: 1531 ggtctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggag 1590 ||| | || ||||||||||| ||||| || | ||||||| ||| || ||||| || || Sbjct: 2183 ggtttaggacacaagcttcgagcttacaatctgcaagatgctggtcgagacacggttgaa 2242 Query: 1591 gctaacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacagata 1650 ||||| |||||| ||||||| ||||| || || || || ||||| || ||||||||| || Sbjct: 2243 gctaatgaggaattaggacttcctgttgattctagagagtatggaattggtgcacaggta 2302 Query: 1651 tta 1653 ||| Sbjct: 2303 tta 2305 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 793 tgtgttagcatgaaagaagatgacctggaaagattgaaccttcct 837 ||||| ||||||||||||||||| || || || ||| |||||||| Sbjct: 1176 tgtgtgagcatgaaagaagatgatctcgagaggttgcaccttcct 1220
>dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1 Length = 83594 Score = 107 bits (54), Expect = 2e-19 Identities = 144/174 (82%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||||||||| ||||||||||| ||||| ||||| || || |||||||| | || || Sbjct: 44404 tcaaagcctgaggatttcaatcgtccaggtcatatcttcccactgaagtatcgggaaggt 44463 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctggg 1095 || ||||| ||| | ||||||||||||||||||||||||||||| |||| | ||||| Sbjct: 44464 ggggttctgaaaagggctggacacactgaagcatctgttgatctcactgttttagctgga 44523 Query: 1096 ctacctcctgtcggagtactctgtgagattgtggatgaggatggatccatggct 1149 || |||||| |||||||| ||||| ||||| ||||| ||||| ||||||||| Sbjct: 44524 ctggatcctgttggagtactttgtgaaattgttgatgatgatggttccatggct 44577 Score = 85.7 bits (43), Expect = 6e-13 Identities = 238/303 (78%) Strand = Plus / Plus Query: 1351 ggtgagattggagatggtcaagatattcttgtgagggtccattccgagtgcctcacagga 1410 ||||||||||| || |||||||| ||||| |||||||| ||||| || || || ||||| Sbjct: 44961 ggtgagattggtgacggtcaagacattctcgtgagggttcattctgaatgtctaacaggg 45020 Query: 1411 gacatttttggatcagcaagatgtgattgtggtgaccagcttgcaatgtcaatggagagg 1470 ||||| ||||| || ||||| |||||||| || ||||||| ||| | || ||| || | Sbjct: 45021 gacatatttgggtctgcaaggtgtgattgcgggaaccagctagcactctcgatgcagcag 45080 Query: 1471 attgagaaggctggaaggggtgtactagtttatcttcgtggacatgaagggaggggcatt 1530 || ||| |||| | ||||| || ||||| || |||||||||||||| || || || Sbjct: 45081 atcgaggctactggtcgcggtgtgctggtttacctacgtggacatgaaggaagagggatc 45140 Query: 1531 ggtctgggtcacaagcttcgtgcttataacttacaagatgatggacgtgacactgtggag 1590 ||| | || ||||||||||| ||||| || | ||||||| ||| || ||||| || || Sbjct: 45141 ggtttaggacacaagcttcgagcttacaatctgcaagatgctggtcgagacacggttgaa 45200 Query: 1591 gctaacgaggaactaggactgcctgtggactcgagggaatatgggatcggtgcacagata 1650 ||||| |||||| ||||||| ||||| || || || || ||||| || ||||||||| || Sbjct: 45201 gctaatgaggaattaggacttcctgttgattctagagagtatggaattggtgcacaggta 45260 Query: 1651 tta 1653 ||| Sbjct: 45261 tta 45263 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 793 tgtgttagcatgaaagaagatgacctggaaagattgaaccttcct 837 ||||| ||||||||||||||||| || || || ||| |||||||| Sbjct: 44134 tgtgtgagcatgaaagaagatgatctcgagaggttgcaccttcct 44178
>dbj|D45165.1|ATHGTPCII Arabidopsis thaliana mRNA for GTP cyclohydrolase II, complete cds Length = 1167 Score = 107 bits (54), Expect = 2e-19 Identities = 312/398 (78%) Strand = Plus / Plus Query: 1330 gagcatatcgcaatggtgaaaggtgagattggagatggtcaagatattcttgtgagggtc 1389 ||||| || |||||||| || ||||||||||| || |||||||| ||||| |||||||| Sbjct: 247 gagcacatagcaatggttaagggtgagattggtgacggtcaagacattctcgtgagggtt 306 Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtggtgaccag 1449 ||||| || || || ||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct: 307 cattctgaatgtctaacaggggacatatttgggtctgcaaggtgtgattgcgggaaccag 366 Query: 1450 cttgcaatgtcaatggagaggattgagaaggctggaaggggtgtactagtttatcttcgt 1509 || ||| | || ||| || ||| ||| |||| | ||||| || ||||| || ||| Sbjct: 367 ctagcactctcgatgcagcagatcgaggctactggtcgcggtgtgctggtttacctacgt 426 Query: 1510 ggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataacttacaagat 1569 ||||||||||| || || || ||| | || ||||||||||| ||||| || | |||||| Sbjct: 427 ggacatgaaggaagagggatcggtttaggacacaagcttcgagcttacaatctgcaagat 486 Query: 1570 gatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcgagggaa 1629 | ||| || ||||| || || ||||| |||||| ||||||| ||||| || || || || Sbjct: 487 gctggtcgagacacggttgaagctaatgaggaattaggacttcctgttgattctagagag 546 Query: 1630 tatgggatcggtgcacagatattacgcgacctaggagtccgttcaatgaagttgatgacc 1689 ||||| || |||||||||||| || | || |||| || | |||||||| ||||||| Sbjct: 547 tatggaattggtgcacagataataagggatttaggtgttaggacaatgaagctgatgaca 606 Query: 1690 aacaatcctgccaaatatgttggtctgaagggttatgg 1727 || ||||| || || ||||||||| ||||||| ||||| Sbjct: 607 aataatcccgcaaagtatgttggtttgaagggatatgg 644
>gb|AC174344.9| Medicago truncatula clone mth2-167b8, complete sequence Length = 141135 Score = 87.7 bits (44), Expect = 2e-13 Identities = 119/144 (82%) Strand = Plus / Plus Query: 1504 cttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataactta 1563 ||||||||||||||||| ||||| ||||| |||| |||||||||||||| |||||| || Sbjct: 88964 cttcgtggacatgaaggaaggggtattggattgggccacaagcttcgtgcgtataaccta 89023 Query: 1564 caagatgatggacgtgacactgtggaggctaacgaggaactaggactgcctgtggactcg 1623 || ||||| ||| | || ||||| || || || ||||| | ||| ||||||| ||||| Sbjct: 89024 caggatgagggaagggatactgtagaagccaatgaggagttgggattgcctgttgactca 89083 Query: 1624 agggaatatgggatcggtgcacag 1647 ||||| ||||| || ||||||||| Sbjct: 89084 agggagtatggaattggtgcacag 89107 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1376 ttcttgtgagggtccattccgagtgcctcacaggagacatttttggatc 1424 ||||||||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 88836 ttcttgtgagggtacactcagagtgtctcacaggagacatatttggatc 88884 Score = 56.0 bits (28), Expect = 5e-04 Identities = 139/176 (78%) Strand = Plus / Plus Query: 988 gatttcaatcggccaggccatatttttcctctgaagtacagagatgggggtgttctcaaa 1047 ||||||||||| |||||||||||||| || || || |||| || || ||| | | || Sbjct: 85410 gatttcaatcgcccaggccatattttcccgctaaaatacaaggaaggtggtatattgaag 85469 Query: 1048 cgagctggacacactgaagcatctgttgatcttgctgtgctggctgggctacctcctgtc 1107 |||||||||| || ||||| || ||||||||||| || || ||||| | |||||| Sbjct: 85470 agagctggacatacagaagcttcagttgatcttgcagtacttgctggtttggatcctgtg 85529 Query: 1108 ggagtactctgtgagattgtggatgaggatggatccatggctcgcttacccaagct 1163 | ||| || |||||| |||||||||| ||||| ||||||||| | ||||| ||||| Sbjct: 85530 gcagttctgtgtgaggttgtggatgatgatggttccatggctagattacctaagct 85585 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1669 cgttcaatgaagttgatgaccaacaatcctgccaaatatgttggtctgaagggttatgg 1727 ||||| |||||| ||||||| |||||||| || ||||||||||| || || |||||||| Sbjct: 89327 cgttctatgaagctgatgacaaacaatccagcaaaatatgttgggctcaaaggttatgg 89385 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 799 agcatgaaagaagatgacctggaaagattgaaccttcctttgatggt 845 ||||||||||| || |||||||| ||||| | |||||||||||||| Sbjct: 84821 agcatgaaagaggaagacctggagagattagagcttcctttgatggt 84867
>emb|CT985811.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 756 Score = 77.8 bits (39), Expect = 1e-10 Identities = 203/255 (79%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 982 cctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatgggggtgtt 1041 ||||||||||| |||||||| |||||| |||| || ||||| || ||||| || || ||| Sbjct: 178 cctgaagattttaatcggccgggccatgttttccccctgaaatatagagaaggaggggtt 237 Query: 1042 ctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctgggctacct 1101 |||||| ||||||| || || ||||| ||| ||||||| || || |||||||| | Sbjct: 238 ctcaaaagagctgggcatacagaagcttctcttgatctggcgatgttggctgggttggag 297 Query: 1102 cctgtcggagtactctgtgagattgtggatgaggatggatccatggctcgcttacccaag 1161 ||||| ||||| | |||||||| |||||||| ||||| || ||||| | ||||| ||| Sbjct: 298 cctgttggagttttatgtgagatagtggatgatgatggttctatggccagattaccaaag 357 Query: 1162 ctgcgcgtgtttgc-tgaaaaggaaaatttgaagattgtatcgattgctgatttgattag 1220 || || ||||| || ||| || || |||||||| | ||||||||||||||||| || Sbjct: 358 cttcgacaatttgcgtggaaa-gagaacttgaagataatttcgattgctgatttgatcag 416 Query: 1221 atataggagaaaaag 1235 |||||| |||||||| Sbjct: 417 atatagaagaaaaag 431
>emb|CT982568.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 749 Score = 77.8 bits (39), Expect = 1e-10 Identities = 203/255 (79%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 982 cctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatgggggtgtt 1041 ||||||||||| |||||||| |||||| |||| || ||||| || ||||| || || ||| Sbjct: 178 cctgaagattttaatcggccgggccatgttttccccctgaaatatagagaaggaggggtt 237 Query: 1042 ctcaaacgagctggacacactgaagcatctgttgatcttgctgtgctggctgggctacct 1101 |||||| ||||||| || || ||||| ||| ||||||| || || |||||||| | Sbjct: 238 ctcaaaagagctgggcatacagaagcttctcttgatctggcgatgttggctgggttggag 297 Query: 1102 cctgtcggagtactctgtgagattgtggatgaggatggatccatggctcgcttacccaag 1161 ||||| ||||| | |||||||| |||||||| ||||| || ||||| | ||||| ||| Sbjct: 298 cctgttggagttttatgtgagatagtggatgatgatggttctatggccagattaccaaag 357 Query: 1162 ctgcgcgtgtttgc-tgaaaaggaaaatttgaagattgtatcgattgctgatttgattag 1220 || || ||||| || ||| || || |||||||| | ||||||||||||||||| || Sbjct: 358 cttcgacaatttgcgtggaaa-gagaacttgaagataatttcgattgctgatttgatcag 416 Query: 1221 atataggagaaaaag 1235 |||||| |||||||| Sbjct: 417 atatagaagaaaaag 431
>dbj|AK228961.1| Arabidopsis thaliana mRNA for putative GTP cyclohydrolase, complete cds, clone: RAFL16-26-L21 Length = 1767 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||| ||||||||||||||||| || || |||||||||||| ||| |||||||| || Sbjct: 768 tcaaaacctgaagatttcaatcgtcctggtcatatttttcctttgagatacagagaaggt 827 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||||| ||| |||| || || || ||||| |||||||| Sbjct: 828 ggtgttcttaaaagagcagggcatacagaagcctctgttga 868 Score = 44.1 bits (22), Expect = 2.1 Identities = 85/106 (80%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 |||||||| ||||| ||| | ||| |||| || ||||||| ||| || || ||||||||| Sbjct: 495 agagaaaacgaaggagatttgataatggcggcatctttggctacacctgaagctatggct 554 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaag 808 || | |||| |||| | || ||||| || ||||| |||||||||| Sbjct: 555 tttgttgtaaagcatgggactggaatcgtgtgtgtgagcatgaaag 600 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 909 tgtgagattgtagatgatgatggttccatggct 941
>ref|NM_127810.2| Arabidopsis thaliana 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II (AT2G22450) mRNA, complete cds Length = 1757 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||| ||||||||||||||||| || || |||||||||||| ||| |||||||| || Sbjct: 768 tcaaaacctgaagatttcaatcgtcctggtcatatttttcctttgagatacagagaaggt 827 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||||| ||| |||| || || || ||||| |||||||| Sbjct: 828 ggtgttcttaaaagagcagggcatacagaagcctctgttga 868 Score = 44.1 bits (22), Expect = 2.1 Identities = 85/106 (80%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 |||||||| ||||| ||| | ||| |||| || ||||||| ||| || || ||||||||| Sbjct: 495 agagaaaacgaaggagatttgataatggcggcatctttggctacacctgaagctatggct 554 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaag 808 || | |||| |||| | || ||||| || ||||| |||||||||| Sbjct: 555 tttgttgtaaagcatgggactggaatcgtgtgtgtgagcatgaaag 600 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 909 tgtgagattgtagatgatgatggttccatggct 941
>gb|BT012273.1| Arabidopsis thaliana At2g22450 gene, complete cds Length = 1431 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||| ||||||||||||||||| || || |||||||||||| ||| |||||||| || Sbjct: 661 tcaaaacctgaagatttcaatcgtcctggtcatatttttcctttgagatacagagaaggt 720 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||||| ||| |||| || || || ||||| |||||||| Sbjct: 721 ggtgttcttaaaagagcagggcatacagaagcctctgttga 761 Score = 44.1 bits (22), Expect = 2.1 Identities = 85/106 (80%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 |||||||| ||||| ||| | ||| |||| || ||||||| ||| || || ||||||||| Sbjct: 388 agagaaaacgaaggagatttgataatggcggcatctttggctacacctgaagctatggct 447 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaag 808 || | |||| |||| | || ||||| || ||||| |||||||||| Sbjct: 448 tttgttgtaaagcatgggactggaatcgtgtgtgtgagcatgaaag 493 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 802 tgtgagattgtagatgatgatggttccatggct 834
>gb|BT011627.1| Arabidopsis thaliana At2g22450 mRNA, complete cds Length = 1596 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||| ||||||||||||||||| || || |||||||||||| ||| |||||||| || Sbjct: 754 tcaaaacctgaagatttcaatcgtcctggtcatatttttcctttgagatacagagaaggt 813 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||||| ||| |||| || || || ||||| |||||||| Sbjct: 814 ggtgttcttaaaagagcagggcatacagaagcctctgttga 854 Score = 44.1 bits (22), Expect = 2.1 Identities = 85/106 (80%) Strand = Plus / Plus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 |||||||| ||||| ||| | ||| |||| || ||||||| ||| || || ||||||||| Sbjct: 481 agagaaaacgaaggagatttgataatggcggcatctttggctacacctgaagctatggct 540 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaag 808 || | |||| |||| | || ||||| || ||||| |||||||||| Sbjct: 541 tttgttgtaaagcatgggactggaatcgtgtgtgtgagcatgaaag 586 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 895 tgtgagattgtagatgatgatggttccatggct 927
>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete sequence Length = 106949 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Minus Query: 976 tcaaagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatggg 1035 ||||| ||||||||||||||||| || || |||||||||||| ||| |||||||| || Sbjct: 62614 tcaaaacctgaagatttcaatcgtcctggtcatatttttcctttgagatacagagaaggt 62555 Query: 1036 ggtgttctcaaacgagctggacacactgaagcatctgttga 1076 |||||||| ||| |||| || || || ||||| |||||||| Sbjct: 62554 ggtgttcttaaaagagcagggcatacagaagcctctgttga 62514 Score = 44.1 bits (22), Expect = 2.1 Identities = 85/106 (80%) Strand = Plus / Minus Query: 703 agagaaaatgaaggtgatcttatattggctgcttctttggttaccccagaggctatggct 762 |||||||| ||||| ||| | ||| |||| || ||||||| ||| || || ||||||||| Sbjct: 62977 agagaaaacgaaggagatttgataatggcggcatctttggctacacctgaagctatggct 62918 Query: 763 ttcatagtaaggcatagcacaggaattgtatgtgttagcatgaaag 808 || | |||| |||| | || ||||| || ||||| |||||||||| Sbjct: 62917 tttgttgtaaagcatgggactggaatcgtgtgtgtgagcatgaaag 62872 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 62473 tgtgagattgtagatgatgatggttccatggct 62441
>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence Length = 107205 Score = 65.9 bits (33), Expect = 6e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 979 aagcctgaagatttcaatcggccaggccatatttttcctctgaagtacagagatgggggt 1038 |||||| | |||||||| || || || ||||| |||||| ||| |||||||| || ||| Sbjct: 4500 aagcctcaggatttcaaccgtcctggtcatatctttcctttgagatacagagaaggcggt 4559 Query: 1039 gttctcaaacgagctggacacactgaagcatctgttgatct 1079 ||||| ||| ||||||| ||||| ||||| ||||||||||| Sbjct: 4560 gttcttaaaagagctgggcacacagaagcctctgttgatct 4600 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1117 tgtgagattgtggatgaggatggatccatggct 1149 ||||||||||| ||||| ||||| ||||||||| Sbjct: 4638 tgtgagattgtagatgacgatggttccatggct 4670
>ref|NM_125367.3| Arabidopsis thaliana 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II (AT5G59750) mRNA, complete cds Length = 1766 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1282 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1341 Query: 1561 tt 1562 || Sbjct: 1342 tt 1343 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1171 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1223
>gb|AF361835.1| Arabidopsis thaliana AT5g59750/mth12_150 mRNA, complete cds Length = 1745 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1261 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1320 Query: 1561 tt 1562 || Sbjct: 1321 tt 1322 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1150 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1202
>gb|AY050405.1| Arabidopsis thaliana AT5g59750/mth12_150 mRNA, complete cds Length = 1713 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1248 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1307 Query: 1561 tt 1562 || Sbjct: 1308 tt 1309 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1137 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1189
>dbj|AB006705.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH12 Length = 74877 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 63291 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 63350 Query: 1561 tt 1562 || Sbjct: 63351 tt 63352 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 63180 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 63232
>gb|BT002730.1| Arabidopsis thaliana At5g59750/mth12_150 gene, complete cds Length = 1530 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1174 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1233 Query: 1561 tt 1562 || Sbjct: 1234 tt 1235 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1063 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1115
>emb|BX831046.1|CNS0A09W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1725 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1269 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1328 Query: 1561 tt 1562 || Sbjct: 1329 tt 1330 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1158 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1210
>emb|BX829706.1|CNS09YO9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1704 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || |||||||||||| | ||||||||| Sbjct: 1282 tatctccgtggccacgaaggaagaggcattggccttggtcacaagcttagagcttataac 1341 Query: 1561 tt 1562 || Sbjct: 1342 tt 1343 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1171 cattcagagtgcttgacaggagacatttttggctcagcacggtgtgactgtgg 1223
>ref|NM_077393.3| Caenorhabditis elegans honeybee MBlk-1 Related factor family member (mbr-1) (mbr-1) mRNA, complete cds Length = 1522 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Plus Query: 655 gaggacattcgacaaggaaaacttg 679 ||||||||||||||||||||||||| Sbjct: 497 gaggacattcgacaaggaaaacttg 521
>dbj|AB236333.1| Caenorhabditis elegans mbr-1 mRNA for MBlk-1 Related factor-1, complete cds Length = 1523 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Plus Query: 655 gaggacattcgacaaggaaaacttg 679 ||||||||||||||||||||||||| Sbjct: 497 gaggacattcgacaaggaaaacttg 521
>emb|BX833594.1|CNS09Z93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1702 Score = 50.1 bits (25), Expect = 0.033 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1390 cattccgagtgcctcacaggagacatttttggatcagcaagatgtgattgtgg 1442 ||||| |||||| | ||||||||||||||||| |||||| | ||||| ||||| Sbjct: 1170 cattcagagtgcttaacaggagacatttttggctcagcacggtgtgactgtgg 1222 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1501 tatcttcgtggacatgaagggaggggcattggtctgggtcacaagcttcgtgcttataac 1560 ||||| ||||| || ||||| || |||||||| || ||| |||||||| | ||||||||| Sbjct: 1281 tatctccgtggccacgaaggaagaggcattggccttggtaacaagcttagagcttataac 1340 Query: 1561 tt 1562 || Sbjct: 1341 tt 1342
>emb|Z68010.1|CET01C1 Caenorhabditis elegans Cosmid T01C1, complete sequence Length = 27602 Score = 50.1 bits (25), Expect = 0.033 Identities = 25/25 (100%) Strand = Plus / Minus Query: 655 gaggacattcgacaaggaaaacttg 679 ||||||||||||||||||||||||| Sbjct: 9842 gaggacattcgacaaggaaaacttg 9818
>ref|NM_001062292.1| Oryza sativa (japonica cultivar-group) Os05g0460600 (Os05g0460600) mRNA, complete cds Length = 1761 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 1112 gtgagggtccattccgagtgcct 1134 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 728 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 787 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 788 actgaggcatccgtcgatcttg 809
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 70664 gtgagggtccattccgagtgcct 70642 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Minus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 71797 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 71738 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 71737 actgaggcatccgtcgatcttg 71716
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 22481257 gtgagggtccattccgagtgcct 22481235 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Minus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 22482390 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 22482331 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 22482330 actgaggcatccgtcgatcttg 22482309
>gb|AY224441.1| Oryza sativa (japonica cultivar-group) isolate 22858 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase-like protein mRNA, partial cds Length = 1383 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 850 gtgagggtccattccgagtgcct 872 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 466 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 525 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 526 actgaggcatccgtcgatcttg 547
>dbj|AK072931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144M13, full insert sequence Length = 1761 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 1112 gtgagggtccattccgagtgcct 1134 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 728 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 787 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 788 actgaggcatccgtcgatcttg 809
>dbj|AK067655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D09, full insert sequence Length = 2571 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1381 gtgagggtccattccgagtgcct 1403 ||||||||||||||||||||||| Sbjct: 1840 gtgagggtccattccgagtgcct 1862 Score = 44.1 bits (22), Expect = 2.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 1000 ccaggccatatttttcctctgaagtacagagatgggggtgttctcaaacgagctggacac 1059 ||||||||||| || ||||| || ||| || | || ||||| || ||| |||||||||| Sbjct: 707 ccaggccatatattccctctaaaataccgaaacggtggtgtgctaaaaagagctggacat 766 Query: 1060 actgaagcatctgttgatcttg 1081 ||||| ||||| || ||||||| Sbjct: 767 actgaggcatccgtcgatcttg 788
>dbj|AP003173.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2579L12, complete sequence Length = 206769 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1401 cctcacaggagacatttttggat 1423 ||||||||||||||||||||||| Sbjct: 29680 cctcacaggagacatttttggat 29658
>dbj|AP002001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-680E19, complete sequence Length = 149253 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1401 cctcacaggagacatttttggat 1423 ||||||||||||||||||||||| Sbjct: 141198 cctcacaggagacatttttggat 141176
>gb|AC121268.7| Mus musculus chromosome 3, clone RP24-468O23, complete sequence Length = 176264 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1065 agcatctgttgatcttgctgtg 1086 |||||||||||||||||||||| Sbjct: 15883 agcatctgttgatcttgctgtg 15904
>dbj|AK095347.1| Homo sapiens cDNA FLJ38028 fis, clone CTONG2013222 Length = 2322 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1400 gcctcacaggagacatttttgg 1421 |||||||||||||||||||||| Sbjct: 1162 gcctcacaggagacatttttgg 1183
>gb|AC134174.1| Drosophila pseudoobscura FOSMID DPSF1-548A7 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 41626 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2013 ataattataattatccaaccgt 2034 |||||||||||||||||||||| Sbjct: 26360 ataattataattatccaaccgt 26339
>emb|Z82899.2|HS181N1 Human DNA sequence from clone RP1-181N1 on chromosome Xq24-25 Contains part of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, complete sequence Length = 126474 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1219 agatataggagaaaaagagaca 1240 |||||||||||||||||||||| Sbjct: 93170 agatataggagaaaaagagaca 93149
>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence Length = 61985 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 704 gagaaaatgaaggtgatcttat 725 |||||||||||||||||||||| Sbjct: 4498 gagaaaatgaaggtgatcttat 4519
>gb|AC137587.2| Homo sapiens 3 BAC RP13-861G15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131999 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1381 gtgagggtccattccgagtgcc 1402 |||||||||||||||||||||| Sbjct: 69301 gtgagggtccattccgagtgcc 69280
>dbj|AP004512.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10L16, TM0042, complete sequence Length = 85815 Score = 44.1 bits (22), Expect = 2.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1677 gaagttgatgaccaacaatcctgccaaata 1706 |||| ||||||||||||||| ||||||||| Sbjct: 45460 gaagatgatgaccaacaatcatgccaaata 45489
>dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-660I20, complete sequence Length = 171287 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1381 gtgagggtccattccgagtgcc 1402 |||||||||||||||||||||| Sbjct: 112627 gtgagggtccattccgagtgcc 112606
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1543 aagcttcgtgcttataacttacaaga 1568 ||||||||||||||||| |||||||| Sbjct: 4075985 aagcttcgtgcttataaattacaaga 4076010
>emb|CR388411.8| Zebrafish DNA sequence from clone CH211-158E11 in linkage group 21, complete sequence Length = 146786 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1775 agaatcggagatacttggagaccaaaaga 1803 |||||||||||||||||| ||| |||||| Sbjct: 96605 agaatcggagatacttggtgacaaaaaga 96633
>gb|AC161279.3| Pan troglodytes BAC clone CH251-487L13 from chromosome x, complete sequence Length = 218401 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1002 aggccatatttttcctctgaa 1022 ||||||||||||||||||||| Sbjct: 114914 aggccatatttttcctctgaa 114894
>ref|XM_001141870.1| PREDICTED: Pan troglodytes hypothetical protein LOC737131, transcript variant 4 (LOC737132), mRNA Length = 2357 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1400 gcctcacaggagacatttttg 1420 ||||||||||||||||||||| Sbjct: 1183 gcctcacaggagacatttttg 1203
>gb|AC189388.1| Brassica rapa subsp. pekinensis clone KBrB053D06, complete sequence Length = 117317 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1995 aatataaatatttggccaata 2015 ||||||||||||||||||||| Sbjct: 107815 aatataaatatttggccaata 107835
>gb|BC116461.1| Xenopus laevis cDNA clone MGC:132388 IMAGE:3399274, complete cds Length = 1885 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 887 ccattactgtggatgctaaag 907 ||||||||||||||||||||| Sbjct: 1025 ccattactgtggatgctaaag 1045
>gb|AC144385.2| Pan troglodytes BAC clone CH251-23H14 from X, complete sequence Length = 126566 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 aggccatatttttcctctgaa 1022 ||||||||||||||||||||| Sbjct: 60917 aggccatatttttcctctgaa 60937
>gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, complete sequence Length = 159726 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tgattagcagattgattgagt 200 ||||||||||||||||||||| Sbjct: 119053 tgattagcagattgattgagt 119033
>emb|AL592299.6| Human DNA sequence from clone RP11-498P10 on chromosome 1 Contains the 3' end of the RGL1 gene for ral guanine nucleotide dissociation stimulator-like 1 and the 3' end of the C1orf17 gene for chromosome 1 open reading frame 17, complete sequence Length = 79210 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 caggaccatccaaccacaaac 504 ||||||||||||||||||||| Sbjct: 59010 caggaccatccaaccacaaac 58990
>emb|AL359915.14| Human DNA sequence from clone RP11-418J17 on chromosome 1 Contains the 3' end of a novel gene, a ribosomal protein L6 (RPL6) pseudogene and the 5' end of a novel gene, complete sequence Length = 159158 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1879 ctggacttgcttctatttaca 1899 ||||||||||||||||||||| Sbjct: 4130 ctggacttgcttctatttaca 4110
>gb|AC134913.6| Mus musculus BAC clone RP23-195M6 from chromosome 13, complete sequence Length = 223130 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1011 ttttcctctgaagtacagaga 1031 ||||||||||||||||||||| Sbjct: 137286 ttttcctctgaagtacagaga 137306
>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the gene for a novel protein similar to ribosomal protein S8 (Rps8) and a CpG island, complete sequence Length = 200125 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1444 gaccagcttgcaatgtcaatg 1464 ||||||||||||||||||||| Sbjct: 150411 gaccagcttgcaatgtcaatg 150431
>gb|AF277315.6| Homo sapiens chromosome X clone RP5-865E18, RP5-1087L19 map q28, complete sequence Length = 147234 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1002 aggccatatttttcctctgaa 1022 ||||||||||||||||||||| Sbjct: 138159 aggccatatttttcctctgaa 138179
>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence Length = 178345 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tgattagcagattgattgagt 200 ||||||||||||||||||||| Sbjct: 167364 tgattagcagattgattgagt 167344
>emb|BX571670.7| Zebrafish DNA sequence from clone DKEY-153J7 in linkage group 17, complete sequence Length = 213920 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 927 atctgcaaaggatagggcaaa 947 ||||||||||||||||||||| Sbjct: 25922 atctgcaaaggatagggcaaa 25902
>gb|AC157529.2| Pan troglodytes BAC clone CH251-498N14 from chromosome unknown, complete sequence Length = 186743 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1002 aggccatatttttcctctgaa 1022 ||||||||||||||||||||| Sbjct: 158116 aggccatatttttcctctgaa 158096
>dbj|AP002409.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-781P6, complete sequence Length = 180566 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1400 gcctcacaggagacatttttg 1420 ||||||||||||||||||||| Sbjct: 50030 gcctcacaggagacatttttg 50010
>dbj|AP005210.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-146G7, complete sequence Length = 180737 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1400 gcctcacaggagacatttttg 1420 ||||||||||||||||||||| Sbjct: 163730 gcctcacaggagacatttttg 163710 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 403,337,096 Number of extensions: 21511087 Number of successful extensions: 123183 Number of sequences better than 10.0: 72 Number of HSP's gapped: 123173 Number of HSP's successfully gapped: 163 Length of query: 2130 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2107 Effective length of database: 18,503,978,556 Effective search space: 38987882817492 Effective search space used: 38987882817492 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
