ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072680:Os01g0862000 154 2e-37
2AK059523:Os01g0885600 116 5e-26
3AK119297:Os04g0481100 35 0.24
4AK073142:Os05g0411300 33 0.90
5AK120163:Os08g0377400 30 4.5
6AK105467:Os08g0377400 30 4.5
7AK101247:Os09g0441900 30 5.8
8AK059396:Os02g0581500 30 5.8
9Os06g0280500:Os06g0280500 30 7.6
10Os05g0517600:Os05g0517600 30 7.6
11Os04g0120000:Os04g0120000 30 7.6
12AK106437:Os12g0568000 30 7.6
13AK071875:Os07g0658700 30 7.6
14AK109980: 29 10.0
15AK109647:Os02g0580600 29 10.0
16AK105357:Os04g0443500 29 10.0
17AK058472:Os03g0825500 29 10.0

>AK072680:Os01g0862000 |
          Length = 186
 Score =  154 bits (390), Expect = 2e-37
 Identities = 73/80 (91%), Positives = 75/80 (93%)
 Frame = +2

Query: 545 EWKMVLVDLRNHGSSARIKGLGPPHDMSSAARDLADLVKARGWTWPDVVVGHSMGGKVAL 724
           EW+MVLVDLRNHG SA IKGL PPHDMS+AARDLADLVKARGW WPDVVVGHSMGGKVAL
Sbjct: 95  EWRMVLVDLRNHGRSAGIKGLRPPHDMSTAARDLADLVKARGWAWPDVVVGHSMGGKVAL 154

Query: 725 DFAESCSRGDYGESAALPKQ 784
           DFAESCSRGDYGESA LPKQ
Sbjct: 155 DFAESCSRGDYGESADLPKQ 174



 Score =  112 bits (281), Expect = 7e-25
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = +1

Query: 103 WRLLLSSPVHSDAAHQTETLAFHEIQLSPEKSPTATAFVLHGLLGSGRNWRTFSRTLASQ 282
           W  +LSS VHS+A++QTETLAF EIQLSPEK  TATAFVLHGLLGSGRNWR+FSR LAS+
Sbjct: 27  WSHVLSSSVHSEASNQTETLAFDEIQLSPEKPSTATAFVLHGLLGSGRNWRSFSRALASE 86

Query: 283 LRDRSPSD 306
           LRDRSPSD
Sbjct: 87  LRDRSPSD 94



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>AK059523:Os01g0885600 |
          Length = 400

 Score =  116 bits (291), Expect = 5e-26
 Identities = 60/175 (34%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
 Frame = +1

Query: 1270 QLWVLDSVPGEVKIDNSDGEVE--RVLQTLASLPSSLPSRKWVVDHMVSLGFSKSLSDWI 1443
            ++WVLD+ PG+V+    DGE     ++++L  +P  + S++ VVD +V   FS  ++ W+
Sbjct: 217  RVWVLDATPGKVRA-GGDGEDHPAELIESLRRMPMQVSSKQEVVDALVKEQFSVDVARWV 275

Query: 1444 GSNLKKDN-------EHVTWAFDLQAATDMFNSYRDRSYWALLENPPKGLEISIVQAELS 1602
             +NL++ +          +W FDL   +DM+ SY + + W ++EN P+G+ I+ ++AE S
Sbjct: 276  ATNLRRSSPLGSLSSSSFSWIFDLNGISDMYKSYEETNLWGIVENVPRGVHINFLKAERS 335

Query: 1603 -DRWHPDDVQRLKALSRRGRKPDVGKVSLHVLPNSGHWVHVDNHKGLLETMAPNF 1764
              RW  DD+QR+          + G V +HVL ++GHWVH DN  GL   ++  F
Sbjct: 336  LHRWALDDLQRIHTAEELA-ADEGGGVEMHVLEDAGHWVHADNPDGLFRILSSTF 389



 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%)
 Frame = +2

Query: 548 WKMVLVDLRNHGSSARIKGLGPPHDMSSAARDLADLVKARGWTWPDVVVGHSMGGKVALD 727
           W+ +LVDLR HG SA IK  G PH ++S A D+  L+     T P V+VGHS GGKVAL 
Sbjct: 146 WQFLLVDLRCHGDSASIKKRG-PHTVASTALDVLKLIVQLRLT-PRVLVGHSFGGKVALS 203

Query: 728 FAESCSR 748
             E  ++
Sbjct: 204 MVEQAAK 210



 Score = 34.3 bits (77), Expect = 0.31
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +1

Query: 208 TAFVLHGLLGSGRNWRTFSRTLASQ 282
           TA +LHG+LGS +NW +F++ LA +
Sbjct: 118 TAVLLHGILGSRKNWGSFAKRLAQE 142



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>AK119297:Os04g0481100 |
          Length = 492

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = -1

Query: 761 LRNHHGSNSPQN-PVRPFHPWSDPRRHPAMSSPGPSLNQRDPWPHSTYHGVGPAL*SWLS 585
           +R H  S+SP + P R   P    RRH +  S G SL                    WL+
Sbjct: 130 VRLHRASSSPHDRPRRAGRPAPSARRHSSGLSRGDSL-------------------CWLA 170

Query: 584 --SHGSSNPQEPSSTLQAHTHQNIQHSYKTTHR 492
             +H S++PQ+PSS++   T  +     +TTHR
Sbjct: 171 VYAHASASPQDPSSSVVCTTDDD----RRTTHR 199



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>AK073142:Os05g0411300 |
          Length = 646

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
 Frame = -2

Query: 865 RNNKTLGKQRNK-YVRTNHVKVRNNSLNLFGKSSRFS-VITTGATLRKIQCDLSTHGVTH 692
           R +  L +QR K YV     KV++    +   +SR S V+   ATLR+    LS   V  
Sbjct: 183 RESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVVAENATLRQ---QLSGGSVN- 238

Query: 691 DDIRPCPAPGLH*ISEIPGRTRHIMGWAQPFDPG*APMVPQIHKNHLPLYRHTHTKIFST 512
                CP PG++  + IPG   H      P+ PG A   P  H   +P+           
Sbjct: 239 -----CPPPGVYPPAPIPG--MHF-----PWMPGYAMRPPGSHVPLVPI----------P 276

Query: 511 RIKQPTEFSSLKSEQLPACKHTTPN 437
           R+K      S K  + P  K T  N
Sbjct: 277 RLKPQQPVPSSKVVKKPESKKTVEN 301



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>AK120163:Os08g0377400 |
          Length = 286

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 560 LVDLRNHGSSARIKGLGPPHDMSSAARDLADLVKARGWTWPDVVVGHSM 706
           +VD R H S  R K +    D     +D+A+L+K R      ++VGH++
Sbjct: 136 IVDYRTHISGIRPKHMNKAKDFWVVQKDVAELIKGR------ILVGHAL 178



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>AK105467:Os08g0377400 |
          Length = 286

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 560 LVDLRNHGSSARIKGLGPPHDMSSAARDLADLVKARGWTWPDVVVGHSM 706
           +VD R H S  R K +    D     +D+A+L+K R      ++VGH++
Sbjct: 136 IVDYRTHISGIRPKHMNKAKDFWVVQKDVAELIKGR------ILVGHAL 178



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>AK101247:Os09g0441900 |
          Length = 444

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = -2

Query: 1558 GSPAVPSSFYLCK-N*TCLWQPEDQKPRSHVHCPS-SSCCQSSLKVTWRIPG*PCGPQPT 1385
            GS   P     CK N +C   P   KP     CPS SSCC +S           C P  T
Sbjct: 160  GSCCSPDCCSCCKPNCSCCKTPSCCKPNCSCSCPSCSSCCDTSC----------CKPSCT 209

Query: 1384 C 1382
            C
Sbjct: 210  C 210



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>AK059396:Os02g0581500 |
          Length = 254

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = +2

Query: 551 KMVLVDLRNHGSSARIK-GLGPPHDMSSAARDLADLVKARGWTWPD---VVVGHSMGGKV 718
           +++ VDL  HG S  ++  +   + +S + + +ADL+        D   VVVG+SMG ++
Sbjct: 10  RVIAVDLPGHGESEILQHDVENSNQISFSVQSVADLLLKLIRNITDGAVVVVGYSMGARI 69

Query: 719 ALDFA 733
           AL  A
Sbjct: 70  ALHMA 74



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>Os06g0280500:Os06g0280500 |
          Length = 1168

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 737 SPQNPVRPFHPWSDP--RRHPAMSSPGPSLNQRDPWP 633
           SP  P  P HP S P  R  P   +P PS +Q+ P P
Sbjct: 724 SPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 760



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>Os05g0517600:Os05g0517600 |
          Length = 145

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
 Frame = +1

Query: 1411 LGFSKSLSDWI---GSNLKKDNEHVTWAFDLQ------AATDMFNSYRDRSYWALLENPP 1563
            +GFS++  + +     ++KKD+E +   F L+      AA  MF+  RD      LEN P
Sbjct: 1    MGFSETQEELVLRSWQSMKKDSESIALKFFLRIFEIAPAAKQMFSFLRDSGDDVPLENHP 60

Query: 1564 KGLE 1575
            K  E
Sbjct: 61   KACE 64



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>Os04g0120000:Os04g0120000 |
          Length = 2422

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 737 SPQNPVRPFHPWSDP--RRHPAMSSPGPSLNQRDPWP 633
           SP  P  P HP S P  R  P   +P PS +Q+ P P
Sbjct: 713 SPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 749



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>AK106437:Os12g0568000 |
          Length = 166

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = -1

Query: 752 HHGSNSPQ-NPVRPFHPWSDPRRH---PAMSSPGPSLNQRDPWPHS 627
           HH S   Q  P+ P HP   P RH   PA  SP P      P P S
Sbjct: 61  HHFSRPEQPRPLLPAHPSPSPERHSPSPAHLSPSPERLSPPPAPCS 106



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>AK071875:Os07g0658700 |
          Length = 791

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = -1

Query: 293 RSRSWEARVREKVRQLRPEPR 231
           R+R+WEA VR+ V+Q +P+P+
Sbjct: 6   RARAWEATVRKVVQQQQPQPQ 26



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>AK109980: |
          Length = 1034

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = -1

Query: 752 HHGSNSPQNPVRPFHPWSDPRRHPAMSSPGPSLNQRDPWPHSTYHGVGPAL*SWLSSHGS 573
           H G  +PQ+  +P HP         MS PGP      P P +   G GP       + G 
Sbjct: 809 HPGGQTPQHVPQPMHPGQ-------MSQPGPGPAGPGPVP-APVPGPGP-------TQGP 853

Query: 572 SNPQEP 555
             PQ+P
Sbjct: 854 GPPQQP 859



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>AK109647:Os02g0580600 |
          Length = 469

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = -1

Query: 341 IKGVFGGRRQLPSEGERSRSWEARVREKVRQLRPEPR 231
           I GV  GRR LPSE E +RS E   R   R+L   P+
Sbjct: 345 IAGVLSGRRALPSEEEMTRSVEEFYR--ARELAGVPK 379



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>AK105357:Os04g0443500 |
          Length = 343

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = +2

Query: 551 KMVLVDLRNHGSSARIKGLGPPHDMS--SAARDLADLVKARGWTWPD--VVVGHSMGGKV 718
           ++V +DLR HG S          D+S  + + D+  +++      P   ++VGHSMGG V
Sbjct: 102 RVVSMDLRGHGKSTT----SDDSDLSIETLSSDVIAVLRTLYGDSPPAIILVGHSMGGSV 157

Query: 719 ALDFA 733
           A+  A
Sbjct: 158 AIHVA 162



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>AK058472:Os03g0825500 |
          Length = 330

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
 Frame = -1

Query: 338 KGVFGGRRQLPSEGER----SRSWEARVREKV-----RQLRPEPRRPWRTKAVAVGDF-- 192
           +G   GR +    GER    +R W+  V+E++     R+ +  P+R WR       DF  
Sbjct: 43  EGELTGRERRKQRGERRELRARDWKEEVQERLIHEPARRRKKPPKRTWRENLNL--DFLA 100

Query: 191 -SGESWISWKARVSV 150
             G  W  W  RVS+
Sbjct: 101 EHGPQW--WLVRVSM 113


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 53,761,593
Number of extensions: 1334055
Number of successful extensions: 4198
Number of sequences better than 10.0: 17
Number of HSP's gapped: 4187
Number of HSP's successfully gapped: 20
Length of query: 626
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 519
Effective length of database: 11,115,468
Effective search space: 5768927892
Effective search space used: 5768927892
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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