ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os04g37760:12004.t03346:unspliced-genomic expressed protein 50 1e-10
2LOC_Os10g37690:12010.t03029:unspliced-genomic inner membrane... 40 0.032
3LOC_Os04g28320:12004.t02530:unspliced-genomic hypothetical p... 27 0.34
4LOC_Os09g09960:12009.t00788:unspliced-genomic retrotransposo... 35 0.77
5LOC_Os10g42320:12010.t03460:unspliced-genomic nonsense-media... 35 1.1
6LOC_Os03g50160:12003.t04360:unspliced-genomic chemocyanin pr... 35 1.1
7LOC_Os12g43564:12012.t04025:unspliced-genomic conserved hypo... 34 2.0
8LOC_Os06g14620:12006.t01337:unspliced-genomic ribonucleoside... 34 2.0
9LOC_Os05g49270:12005.t04360:unspliced-genomic solute carrier... 34 2.0
10LOC_Os04g47870:12004.t04309:unspliced-genomic PINHEAD protei... 28 2.4
11LOC_Os11g01190:12011.t00019:unspliced-genomic expressed protein 33 2.7
12LOC_Os08g37874:12008.t03523:unspliced-genomic oxidoreductase... 33 2.7
13LOC_Os01g46590:12001.t04107:unspliced-genomic expressed protein 33 2.7
14LOC_Os12g42130:12012.t03887:unspliced-genomic transparent te... 33 3.8
15LOC_Os04g35490:12004.t03219:unspliced-genomic expressed protein 25 5.0
16LOC_Os09g28050:12009.t02483:unspliced-genomic asparate amino... 32 5.2
17LOC_Os08g29550:12008.t02710:unspliced-genomic retrotransposo... 32 5.2
18LOC_Os05g32230:12005.t02819:unspliced-genomic expressed protein 32 5.2
19LOC_Os09g39160:12009.t03382:unspliced-genomic thiol protease... 32 7.1
20LOC_Os02g12350:12002.t01033:unspliced-genomic histone deacet... 32 7.1
21LOC_Os01g26250:12001.t02331:unspliced-genomic conserved hypo... 32 7.1
22LOC_Os06g37150:12006.t03410:unspliced-genomic L-ascorbate ox... 30 8.2
23LOC_Os12g13120:12012.t01180:unspliced-genomic histidine tria... 31 9.7
24LOC_Os12g01190:12012.t00018:unspliced-genomic RNA recognitio... 31 9.7
25LOC_Os11g39920:12011.t03534:unspliced-genomic expressed protein 31 9.7
26LOC_Os11g35120:12011.t03061:unspliced-genomic OsWAK116 - OsW... 31 9.7
27LOC_Os04g58070:12004.t05270:unspliced-genomic aspartic prote... 31 9.7
28LOC_Os03g51920:12003.t04520:unspliced-genomic peptidase, M50... 31 9.7
29LOC_Os11g29014:12011.t02511:unspliced-genomic retrotransposo... 28 9.9

>LOC_Os04g37760:12004.t03346:unspliced-genomic expressed protein|
          Length = 2493
 Score = 41.4 bits (84), Expect(3) = 1e-10
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -2 / -3

                                               
Query: 679  NLVD*GLGFLCIFLYLFCDGFDPEGCLLKVFITGK 575
            NL+D*GLGFL I LY    G +  G LL++F+ GK
Sbjct: 1009 NLLD*GLGFLGIILYHIGYGLNLGGNLLEIFVAGK 905



 Score = 40.5 bits (82), Expect(3) = 1e-10
 Identities = 20/42 (47%), Positives = 21/42 (50%)
 Frame = -2 / -3

                                                     
Query: 217 DSDLPTMS*YRNTCVPLLPRNHWDAWRQHFGCNT*HEDRHDI 92
           D DLP MS  R   VP+   N W A RQ F  N   E RH I
Sbjct: 250 DQDLPAMSRCR*RRVPVTLSNRWSAQRQAFASNKRFEHRHGI 125



 Score = 28.6 bits (56), Expect(3) = 1e-10
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2 / -3

                                        
Query: 556 EFVNHIRRFLDSLNCYLCRLLHILFHCSH 470
           + ++ +R  +D L+CYL  LLH ++   H
Sbjct: 883 DLLSRLRHRVDHLDCYLRCLLHGVYRIEH 797



 Score = 50.1 bits (103), Expect(3) = 2e-07
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +2 / +2

                                                     
Query: 92  NIMAILMSCVTSKMLAPCIPVVSRQQRDTCISVSAHRRQIRI 217
           N MA+L S V  K LA C P ++++ R+T +S SAHRRQI I
Sbjct: 125 NPMAVLKSLVACKGLALCAPAIAQRHRNTPLSASAHRRQILI 250



 Score = 26.3 bits (51), Expect(3) = 2e-07
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1 / +2

                               
Query: 286 NCCSWFRFWRIARRKIPITQ 345
           N CSWF      RRK P TQ
Sbjct: 467 NPCSWFWSSSTVRRKSPSTQ 526



 Score = 23.1 bits (44), Expect(3) = 2e-07
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2 / +2

                   
Query: 572 AFPGNENL 595
           AFPGNENL
Sbjct: 902 AFPGNENL 925



 Score = 36.8 bits (74), Expect(2) = 5e-05
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = -3 / -1

                                                     
Query: 216 IRICRR*ADTEIHVSRCCRETTGMHGANILDVTHDMRIAMIF 91
           IRICRR*AD +  V R      G H A  L  T D+  AM F
Sbjct: 249 IRICRR*ADADNGVFR*R*AIAGAHSAKPLQATRDLSTAMGF 124



 Score = 34.5 bits (69), Expect(2) = 5e-05
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = -3 / -1

                                                      
Query: 696  S*AVNRTLWIRXXXXXXXXXXXXXXALILKAAFLRFSLPGNA 571
            +*A   T WIR               LIL+A  LRFSLPG A
Sbjct: 1026 N*ATGLTFWIRASAFSASSSITSATVLILEATSLRFSLPGKA 901



 Score = 46.0 bits (94), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +1 / +1

                                                            
Query: 91  KYHGDPHVMCYIQNVGAMHPSGFSATTGHMYFCISSSSANPNRLSHEVL 237
           K HG   + C +Q +GA+  S  SA+  H   CI SS ANP+   ++ L
Sbjct: 124 KSHGGAQISCCLQRLGAVRSSDCSASPEHAVICIGSSPANPDHRLNDEL 270



 Score = 40.5 bits (82), Expect = 0.017
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +3 / +3

                                                      
Query: 84  SL*ISWRSSCHVLHPKCWRHASQWFLGNNGTHVFLYQLIVGKS 212
           +L I WR S  +L  K WR A Q  L   GT  +L++LI GKS
Sbjct: 117 TLQIPWRCSNLLLLAKAWRCALQRLLSVTGTRRYLHRLIAGKS 245



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>LOC_Os10g37690:12010.t03029:unspliced-genomic inner membrane protein OXA1, mitochondrial precursor, putative,|
           expressed
          Length = 4941

 Score = 39.6 bits (80), Expect = 0.032
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2 / -1

                                                         
Query: 520 LNCYLCRLLHILFHCSHLSIKRYCSKDATNDHRDQ*RFVGC*GFSW 383
           LNCY+C    +L H    S K Y  K     H +Q  F  C  F+W
Sbjct: 777 LNCYVCICKALLLHTVKTSSKHYGYKHVAESH*EQLTFSFCVAFNW 640



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>LOC_Os04g28320:12004.t02530:unspliced-genomic hypothetical protein|
          Length = 204

 Score = 27.2 bits (53), Expect(2) = 0.34
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1 / +2

                    
Query: 427 GRWWRLWSS 453
           GRWWR WS+
Sbjct: 140 GRWWRCWSA 166



 Score = 25.8 bits (50), Expect(2) = 0.34
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3 / +2

                                      
Query: 93  ISWRSSCHVLHPKCWRHASQWFLGNNG 173
           + W   C  + P CWR      LG +G
Sbjct: 32  LCWWWCCCCMSPACWRRRRGRCLGRSG 112



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>LOC_Os09g09960:12009.t00788:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 4452

 Score = 35.0 bits (70), Expect = 0.77
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3 / -1

                                               
Query: 51   GIASTLKKLADSL*ISWRSSCHVLHPKCWRHASQW 155
            G+AS++ K      + +R+SC   HP  WR ASQ+
Sbjct: 2988 GLASSIAKNPRPTMLRFRASCMSTHPNPWREASQY 2884



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>LOC_Os10g42320:12010.t03460:unspliced-genomic nonsense-mediated mRNA decay protein 3, putative, expressed|
          Length = 2498

 Score = 34.5 bits (69), Expect = 1.1
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1 / -1

                                                                       
Query: 73   S*LTPCKYHGDPHVMCYIQNVGAMHPSGFSATTGHMYFCISSSSANPNRLSHEVLGHQL 249
            S*L PC +H   H   + Q  G    +G    +    +C  S S  P R  H+  G ++
Sbjct: 1322 S*LCPCHHHSSWHHKDHTQGQGLQDSAGGQDESAR*TWCRFSQSRRPGRPGHKPTGSEI 1146



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>LOC_Os03g50160:12003.t04360:unspliced-genomic chemocyanin precursor, putative, expressed|
          Length = 1891

 Score = 34.5 bits (69), Expect = 1.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1 / +3

                                                   
Query: 205 ANPNRLSHEVLGHQLYRSADADKRNDTNCCSWFRFWRIAR 324
           A P   SH +  H L+  A+   +   NCC    +WR  R
Sbjct: 3   ALPPLASHSLAQHYLHPLAEISSKRSVNCCKAISYWRWLR 122



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>LOC_Os12g43564:12012.t04025:unspliced-genomic conserved hypothetical protein|
          Length = 2281

 Score = 33.6 bits (67), Expect = 2.0
 Identities = 23/93 (24%), Positives = 34/93 (36%)
 Frame = +2 / -2

                                                                        
Query: 140  PCIPVVSRQQRDTCISVSAHRRQIRIGLAMKSWGTSCTVPPMRIRGTTRIAAVGSDSGEL 319
            P +P   R++R    + S  R   R G   + WGT    PP         A  G      
Sbjct: 1641 PPLPSPHRRRRRRTAAASCRRPPSRSGREARIWGTLPPPPPRSTAPLPPQAHTGPPPPSS 1462

                                             
Query: 320  REEKSPLPNKAAAISSDPGELPGKSSASNKSSL 418
            R    P P  + +    P  LP  ++A  ++ L
Sbjct: 1461 RPRPVPSPLPSPSPPPSPFPLPSAAAA*RRAPL 1363



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>LOC_Os06g14620:12006.t01337:unspliced-genomic ribonucleoside-diphosphate reductase small chain, putative,|
           expressed
          Length = 1651

 Score = 33.6 bits (67), Expect = 2.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3 / -3

                                                           
Query: 384 GNSPGSELIAAALLGNGDFSSRNSPESEPTAAIRVVPLIRIGGTVQLV 241
           G+ PG E++    +G G+       E       R VP+ R+GG V L+
Sbjct: 359 GHEPGGEVLEHDAVGGGEEGEHVGDEVALVGGQRGVPVARVGGEVHLL 216



 Score = 32.7 bits (65), Expect = 3.8
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2 / +1

                                                        
Query: 251 TVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPGELP 385
           T PP R  GT R     + S       SP P  + + +S PG  P
Sbjct: 226 TSPPTRATGTPRCPPTSATSSPTCSPSSPPPTASCSRTSPPGSCP 360



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>LOC_Os05g49270:12005.t04360:unspliced-genomic solute carrier family 2, facilitated glucose transporter member 8,|
           putative, expressed
          Length = 4604

 Score = 33.6 bits (67), Expect = 2.0
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2 / +3

                                                                 
Query: 245 SCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPGELPGKSSASN 406
           S T PP   R ++R A   SDS      +   P+   + S  P  LP  SS+S+
Sbjct: 339 SPTSPPSSARSSSRSAPSSSDSRGASPPRRRTPSSETSTSPSPRLLPASSSSSS 500



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>LOC_Os04g47870:12004.t04309:unspliced-genomic PINHEAD protein, putative, expressed|
          Length = 15105

 Score = 28.1 bits (55), Expect(2) = 2.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2 / -1

                                      
Query: 110  MSCVTSKMLAPCIPVVSRQQRDTCIS 187
            +SCV    ++PC+P   R Q + C S
Sbjct: 5277 LSCV*IGSVSPCVPYAPRDQPEPCRS 5200



 Score = 22.1 bits (42), Expect(2) = 2.4
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +2 / -3

                                 
Query: 188  VSAHRRQIRIGLAMKSWGTSC 250
            +    +  R GLA   WG  C
Sbjct: 5179 IQCRHQNPRAGLAEHGWGNGC 5117



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>LOC_Os11g01190:12011.t00019:unspliced-genomic expressed protein|
          Length = 6829

 Score = 33.1 bits (66), Expect = 2.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1 / +1

                                               
Query: 442  LWSSIFLWTDESNGRECGEDGRDSN*DYRESGGCG 546
            L+   F W  + +G ECG++  D     +  G CG
Sbjct: 1045 LYLCFF*WKQDGSGEECGQETEDPKGQVKGRGNCG 1149



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>LOC_Os08g37874:12008.t03523:unspliced-genomic oxidoreductase, putative, expressed|
          Length = 8492

 Score = 33.1 bits (66), Expect = 2.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2 / -1

                              
Query: 610  EGCLLKVFITGKCYDFVC 557
            EGC  KVF +G CY F+C
Sbjct: 1991 EGCYKKVFCSGACYIFLC 1938



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>LOC_Os01g46590:12001.t04107:unspliced-genomic expressed protein|
          Length = 4591

 Score = 33.1 bits (66), Expect = 2.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3 / +3

                                            
Query: 318  CEKKNPHYPTRRLQLVRTLGNYQENPQHPTNL 413
            C+ KN HY T  + L+  L    E P HP NL
Sbjct: 1413 CQLKNVHYLTYIMNLLTLLLKSLEQPAHPINL 1508



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>LOC_Os12g42130:12012.t03887:unspliced-genomic transparent testa 12 protein, putative, expressed|
          Length = 2553

 Score = 32.7 bits (65), Expect = 3.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3 / +2

                                       
Query: 342  PTRRLQLVRTLGNYQENPQHPTNLHWS 422
            PT+RL L+R+L      P  P + HWS
Sbjct: 1145 PTQRLHLIRSLSGMPPTPCLPHDTHWS 1225



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>LOC_Os04g35490:12004.t03219:unspliced-genomic expressed protein|
          Length = 2072

 Score = 24.9 bits (48), Expect(2) = 5.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2 / -1

                          
Query: 280 RSSYPHRRNGTAGAP 236
           R+S   RR GTAGAP
Sbjct: 266 RASPSRRRRGTAGAP 222



 Score = 24.4 bits (47), Expect(2) = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1 / -1

                               
Query: 254 RYSWCPKTSWLSRFGFADDE 195
           R  W P++SW  R   A DE
Sbjct: 104 RARWPPRSSWRERHAVALDE 45



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>LOC_Os09g28050:12009.t02483:unspliced-genomic asparate aminotransferase, putative, expressed|
          Length = 3981

 Score = 32.2 bits (64), Expect = 5.2
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +2 / -1

                                                                   
Query: 200 RRQIRIGLAMKSWGTSCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISS 367
           RR  R     + WG +   PP R  G TR A+ G+  G  R  +  L    AA  S
Sbjct: 291 RRSRRRRWTRRPWGRAPRPPPARPSGATRRASGGARRGGRRRRRRDLTASHAASRS 124



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>LOC_Os08g29550:12008.t02710:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1724

 Score = 32.2 bits (64), Expect = 5.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2 / +2

                                            
Query: 152 VVSRQQRDTCISVSAHRRQIRIGLAMKSWGTSC 250
           +++ +Q  TC+   AHRR++   + + S G++C
Sbjct: 488 ILTSRQFYTCLKTRAHRRRVHHAMCLLSMGSAC 586



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>LOC_Os05g32230:12005.t02819:unspliced-genomic expressed protein|
          Length = 5666

 Score = 32.2 bits (64), Expect = 5.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1 / -1

                           
Query: 418 GHGGRWWRLWSSIFLW 465
           G GG WWR W+ ++ W
Sbjct: 92  GGGGWWWRAWTGVWWW 45



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>LOC_Os09g39160:12009.t03382:unspliced-genomic thiol protease SEN102 precursor, putative, expressed|
          Length = 2139

 Score = 31.8 bits (63), Expect = 7.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2 / +2

                                 
Query: 239 GTSCTVPPMRIRGTTRIAAVGS 304
           G +CT PP R RGT+    VGS
Sbjct: 86  GATCTAPPRRRRGTSPTRGVGS 151



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>LOC_Os02g12350:12002.t01033:unspliced-genomic histone deacetylase, putative, expressed|
          Length = 6066

 Score = 31.8 bits (63), Expect = 7.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2 / +1

                                          
Query: 320 REEKSPLPNKAAAISSDPGELPGKSSASNKS 412
           REEK+P PN AAA  ++    P  + A   S
Sbjct: 73  REEKNPTPNSAAAAEAEAAMDPSSAGAGGNS 165



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>LOC_Os01g26250:12001.t02331:unspliced-genomic conserved hypothetical protein|
          Length = 1459

 Score = 31.8 bits (63), Expect = 7.1
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1 / +1

                                 
Query: 451  SIFLWTDESNGRECGEDGRDS 513
            S++L++ + +GR CGE+GR +
Sbjct: 1297 SLYLFSQDGDGRRCGEEGRQA 1359



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>LOC_Os06g37150:12006.t03410:unspliced-genomic L-ascorbate oxidase precursor, putative, expressed|
          Length = 5470

 Score = 29.9 bits (59), Expect(2) = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2 / -1

                                        
Query: 236  WGTSCTVPPMRIRGTTRIAAVGSDSGEL 319
            W T+ T PP R R T  +A V   +G L
Sbjct: 3328 WSTTSTTPPCRSRNTLSLAVVALFAGGL 3245



 Score = 24.0 bits (46), Expect(2) = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3 / -2

                              
Query: 81   DSL*ISWRSSCHVLHPKC 134
            D L +SW + C +  PKC
Sbjct: 5010 DCLYVSWYNLCTLFLPKC 4957



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>LOC_Os12g13120:12012.t01180:unspliced-genomic histidine triad family protein, putative, expressed|
          Length = 7744

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1 / -3

                                  
Query: 394  LSIQQIFIGHGGRWWRLWSSIF 459
            L +++IF   G  WWR WS +F
Sbjct: 7079 LFLRRIFFRRGVLWWRNWSELF 7014



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>LOC_Os12g01190:12012.t00018:unspliced-genomic RNA recognition motif family protein, expressed|
          Length = 6714

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1 / +3

                                               
Query: 442  LWSSIFLWTDESNGRECGEDGRDSN*DYRESGGCG 546
            L+   F W  + +G +CG++  D     +  G CG
Sbjct: 990  LYLCFF*WKQDGSGEKCGQETEDPKGQVKGRGNCG 1094



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>LOC_Os11g39920:12011.t03534:unspliced-genomic expressed protein|
          Length = 3825

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1 / +3

                                     
Query: 433  WWRLWSSIFLWTDESNGRECGEDGR 507
            WW  W S   W   S  RE G  G+
Sbjct: 1848 WWLPWCSCSCWEQSSTAREYGRSGQ 1922



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>LOC_Os11g35120:12011.t03061:unspliced-genomic OsWAK116 - OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK)|
          Length = 2040

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3 / -1

                                      
Query: 78   LTSSTLKLYLHQRCLWPSTLFVANFP 1
            LTS  LK + H R  WPS  F A+ P
Sbjct: 1977 LTSEQLKAFCHFRHCWPSIFFRAHTP 1900



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>LOC_Os04g58070:12004.t05270:unspliced-genomic aspartic proteinase nepenthesin-2 precursor, putative, expressed|
          Length = 1867

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +2 / -3

                                                         
Query: 233 SWGTSCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSD 370
           S G  CT        TTR  +VG +    R + SPLP+     +SD
Sbjct: 485 SQGRHCTQMTSLPESTTRY*SVGGEPTPTRTKYSPLPSSTPGTTSD 348



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>LOC_Os03g51920:12003.t04520:unspliced-genomic peptidase, M50 family, putative, expressed|
          Length = 2400

 Score = 31.3 bits (62), Expect = 9.7
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2 / +2

                                                                       
Query: 233 SWGTSCTVPPMRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPGELPGKSSASNKS 412
           SWGT  + PP   R +    +  S +      +SP  + A+  +S P    G SS    S
Sbjct: 455 SWGTRPSRPPSSWRRSAPTGSSASSTASPTPTRSPASSAASLGASSPARRRGSSSPRTPS 634



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>LOC_Os11g29014:12011.t02511:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4888

 Score = 27.6 bits (54), Expect(2) = 9.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3 / -1

                        
Query: 99   WRSSCHVLHPKC 134
            WRS CHV  P+C
Sbjct: 4402 WRS*CHVTEPRC 4367



 Score = 25.8 bits (50), Expect(2) = 9.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1 / -1

                                   
Query: 172  GHMYFCISSSSANPNRLSHEVLG 240
            GH+ F  +  S   N LSH +LG
Sbjct: 3532 GHLRFAFALLSLRHNSLSHRLLG 3464


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 347,308,581
Number of extensions: 5677868
Number of successful extensions: 25322
Number of sequences better than 10.0: 29
Length of query: 294
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 245
Effective length of database: 52,856,264
Effective search space: 12949784680
Effective search space used: 12949784680
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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