>Q5XG87:POLS_HUMAN DNA polymerase sigma - Homo sapiens (Human)|
          Length = 542
 Score = 31.6 bits (70), Expect = 4.4
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +2

Query: 230 KSWGTSCTVPP---MRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISSDPGELPGKSSA 400
           + WG+     P    RI+   RIA    +  + RE +SP   +     S P  L   SSA
Sbjct: 300 EKWGSKAHPSPGMDSRIKIKERIATCNGEQTQNREPESPYGQRLTLSLSSPQLLSSGSSA 359

Query: 401 SNKSSL 418
           S+ SSL
Sbjct: 360 SSVSSL 365

>O74442:UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16 -|
           Schizosaccharomyces pombe (Fission yeast)
          Length = 457

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 94  YHGDPHVMCYIQNVGAMHPSGFSATTGHMY-FCISSS 201
           Y  DP+  C+ + +G +  +G S  +GH Y FC SS+
Sbjct: 361 YMSDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSN 397

>Q5RF97:CA181_PONPY HIT-type zinc finger-containing protein C1orf181 homolog - Pongo|
           pygmaeus (Orangutan)
          Length = 465

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 411 DLLDAEDFPGNSPGSELIAAALLGNGDFSSRNSPESEP 298
           DL  AE+F G   G  L     +G+G+  SR  PE  P
Sbjct: 35  DLAGAEEFGGGEEGKGLTGVKEIGDGEEGSRQRPEEIP 72

>Q64610:ENPP2_RAT Ectonucleotide pyrophosphatase/phosphodiesterase family member 2|
           precursor - Rattus norvegicus (Rat)
          Length = 887

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 304 RFWRIARRKIPITQQ--GGCN*FGPWGITRKILSIQQIFIGHG 426
           R W +AR+ + + ++  G C   G  G   K+ S+Q +F+G+G
Sbjct: 449 RRWHVARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYG 491

>Q9R1E6:ENPP2_MOUSE Ectonucleotide pyrophosphatase/phosphodiesterase family member 2|
           precursor - Mus musculus (Mouse)
          Length = 862

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 304 RFWRIARRKIPITQQ--GGCN*FGPWGITRKILSIQQIFIGHG 426
           R W +AR+ + + ++  G C   G  G   K+ S+Q +F+G+G
Sbjct: 449 RRWHVARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYG 491

>Q13822:ENPP2_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 2|
           precursor - Homo sapiens (Human)
          Length = 863

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 304 RFWRIARRKIPITQQ--GGCN*FGPWGITRKILSIQQIFIGHG 426
           R W +AR+ + + ++  G C   G  G   K+ S+Q +F+G+G
Sbjct: 450 RRWHVARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYG 492

>A1A4K5:ENPP2_BOVIN Ectonucleotide pyrophosphatase/phosphodiesterase family member 2|
           precursor - Bos taurus (Bovine)
          Length = 888

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 304 RFWRIARRKIPITQQ--GGCN*FGPWGITRKILSIQQIFIGHG 426
           R W +AR+ + + ++  G C   G  G   K+ S+Q +F+G+G
Sbjct: 450 RRWHVARKPLEVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYG 492

>P45029:Y1085_HAEIN Uncharacterized protein HI1085 - Haemophilus influenzae|
          Length = 167

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 263 MRIRGTTRIAAV--GSDSGELREEKSPLPNKAAAISSDPGELPGKSSASNKSS 415
           +++R   +I  V  G  S    +EKS LP  + AI+ +  E+P  SS S K+S
Sbjct: 53  LKVRAPLKIGGVVIGRVSAITLDEKSYLPKVSIAINQEYNEIPENSSLSIKTS 105

>Q6PB75:POLS_MOUSE DNA polymerase sigma - Mus musculus (Mouse)|
          Length = 542

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +2

Query: 197 HRRQIRIGLAMKSWGTSCTVPP---MRIRGTTRIAAVGSDSGELREEKSPLPNKAAAISS 367
           +RR+I+     + WG+     P    RI+   RI     +  + RE  SP   +     S
Sbjct: 294 YRRRIK-----EKWGSRILPSPDLDNRIKIKERITTCNGEQMQSREPSSPYTQRLTLSLS 348

Query: 368 DPGELPGKSSASNKSSL 418
            P  L   SSAS+ SSL
Sbjct: 349 SPQLLSSGSSASSVSSL 365


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 146,566,039
Number of extensions: 3196211
Number of successful extensions: 7182
Number of sequences better than 10.0: 9
Number of HSP's gapped: 7175
Number of HSP's successfully gapped: 9
Length of query: 294
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 182
Effective length of database: 69,965,399
Effective search space: 12733702618
Effective search space used: 12733702618
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)