No.
Definition
Score (bits)
E Value
1 ref|NM_001072217.1| Oryza sativa (japonica cultivar-group) Os11g...
706
0.0
2 dbj|AK064297.1| Oryza sativa (japonica cultivar-group) cDNA clon...
698
0.0
3 ref|NM_001072618.1| Oryza sativa (japonica cultivar-group) Os12g...
603
e-168
4 dbj|AK100888.1| Oryza sativa (japonica cultivar-group) cDNA clon...
603
e-168
5 dbj|AK102718.1| Oryza sativa (japonica cultivar-group) cDNA clon...
595
e-166
6 dbj|AK072447.1| Oryza sativa (japonica cultivar-group) cDNA clon...
543
e-151
7 emb|CT832154.1| Oryza sativa (indica cultivar-group) cDNA clone:...
147
2e-31
8 gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, ...
129
4e-26
9 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
129
4e-26
10 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
119
4e-23
11 emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa...
119
4e-23
12 emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575...
119
4e-23
13 ref|NM_001072221.1| Oryza sativa (japonica cultivar-group) Os11g...
103
2e-18
14 ref|NM_001072213.1| Oryza sativa (japonica cultivar-group) Os11g...
98
1e-16
15 dbj|AK069533.1| Oryza sativa (japonica cultivar-group) cDNA clon...
98
1e-16
16 ref|NM_001065575.1| Oryza sativa (japonica cultivar-group) Os07g...
96
6e-16
17 dbj|AK065334.1| Oryza sativa (japonica cultivar-group) cDNA clon...
96
6e-16
18 emb|CT833631.1| Oryza sativa (indica cultivar-group) cDNA clone:...
90
3e-14
19 emb|CT833630.1| Oryza sativa (indica cultivar-group) cDNA clone:...
90
3e-14
20 ref|NM_001072614.1| Oryza sativa (japonica cultivar-group) Os12g...
90
3e-14
21 gb|AY111591.1| Zea mays CL4001_1 mRNA sequence
86
5e-13
22 dbj|AK241552.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
80
3e-11
23 ref|NM_001072616.1| Oryza sativa (japonica cultivar-group) Os12g...
80
3e-11
24 gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome...
80
3e-11
25 gb|AF543419.1| Oryza sativa (japonica cultivar-group) major faci...
80
3e-11
26 ref|NM_001072214.1| Oryza sativa (japonica cultivar-group) Os11g...
68
1e-07
27 dbj|AK121911.1| Oryza sativa (japonica cultivar-group) cDNA clon...
68
1e-07
28 dbj|AK066565.1| Oryza sativa (japonica cultivar-group) cDNA clon...
68
1e-07
29 ref|NM_001072215.1| Oryza sativa (japonica cultivar-group) Os11g...
66
5e-07
30 gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq...
66
5e-07
31 ref|NM_001049225.1| Oryza sativa (japonica cultivar-group) Os01g...
64
2e-06
32 dbj|AK066443.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
2e-06
33 ref|NM_121378.3| Arabidopsis thaliana tetracycline:hydrogen anti...
62
8e-06
34 ref|NM_180705.1| Arabidopsis thaliana tetracycline:hydrogen anti...
62
8e-06
35 dbj|AK221880.1| Arabidopsis thaliana mRNA for transporter-like p...
62
8e-06
36 gb|AY102150.1| Arabidopsis thaliana AT5g13750/MXE10_2 mRNA, comp...
62
8e-06
37 gb|AY062867.1| Arabidopsis thaliana transporter-like protein (At...
62
8e-06
38 gb|AY039542.1| Arabidopsis thaliana AT5g13750/MXE10_2 mRNA, comp...
62
8e-06
39 emb|BX831902.1|CNS09ZU8 Arabidopsis thaliana Full-length cDNA Co...
62
8e-06
40 ref|NM_001072619.1| Oryza sativa (japonica cultivar-group) Os12g...
60
3e-05
41 ref|NM_001072617.1| Oryza sativa (japonica cultivar-group) Os12g...
60
3e-05
42 gb|AY086758.1| Arabidopsis thaliana clone 27439 mRNA, complete s...
58
1e-04
43 ref|NM_001036800.1| Arabidopsis thaliana tetracycline:hydrogen a...
56
5e-04
44 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
56
5e-04
45 dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D...
56
5e-04
46 gb|AF543417.1| Zea mays major facilitator superfamily antiporter...
54
0.002
47 ref|NM_001072218.1| Oryza sativa (japonica cultivar-group) Os11g...
52
0.007
48 gb|AC189212.1| Brassica rapa subsp. pekinensis clone KBrB008I08,...
52
0.007
49 ref|NM_114247.3| Arabidopsis thaliana carbohydrate transporter/ ...
52
0.007
50 ref|NM_202653.1| Arabidopsis thaliana carbohydrate transporter/ ...
52
0.007
51 ref|NM_202654.1| Arabidopsis thaliana carbohydrate transporter/ ...
52
0.007
52 emb|BX824989.1|CNS0A65Q Arabidopsis thaliana Full-length cDNA Co...
52
0.007
53 emb|BX824619.1|CNS0A5M1 Arabidopsis thaliana Full-length cDNA Co...
52
0.007
54 emb|Z70274.1|HSU84B10 Human DNA sequence from clone LL0XNC01-84B...
48
0.12
55 emb|CT828163.1| Oryza sativa (indica cultivar-group) cDNA clone:...
46
0.46
56 gb|AC183793.2| Pan troglodytes BAC clone CH251-668L23 from chrom...
46
0.46
57 emb|CR759734.3| Zebrafish DNA sequence from clone CH211-140L7 in...
46
0.46
58 gb|AC100720.8| Homo sapiens chromosome 15, clone CTD-2317M11, co...
46
0.46
59 gb|AY104766.1| Zea mays PCO117107 mRNA sequence
46
0.46
60 ref|NM_001072219.1| Oryza sativa (japonica cultivar-group) Os11g...
44
1.8
61 gb|AC159804.18| Glycine max clone gmp1-34b24, complete sequence
44
1.8
62 gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Can...
44
1.8
63 gb|BC040680.1| Homo sapiens cDNA clone IMAGE:4817893
44
1.8
64 gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
44
1.8
65 gb|AC009435.5| Homo sapiens chromosome , clone RP11-124B13, comp...
44
1.8
66 emb|AL121974.16|HSJ417L20 Human DNA sequence from clone RP3-417L...
44
1.8
67 emb|AL162691.1|ATT28A8 Arabidopsis thaliana DNA chromosome 3, BA...
44
1.8
68 gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, comp...
44
1.8
69 gb|AC186978.11| Canis Familiaris chromosome 20, clone XX-263M4, ...
42
7.2
70 ref|XM_526708.2| PREDICTED: Pan troglodytes dachsous 2, transcri...
42
7.2
71 ref|XM_001139924.1| PREDICTED: Pan troglodytes MAX dimerization ...
42
7.2
72 ref|XM_525776.2| PREDICTED: Pan troglodytes MAX dimerization pro...
42
7.2
73 dbj|AK225200.1| Homo sapiens mRNA for dachsous 2 isoform 1 varia...
42
7.2
74 ref|XR_010649.1| PREDICTED: Macaca mulatta similar to dachsous 2...
42
7.2
75 gb|AC161576.8| Mus musculus chromosome 8, clone RP24-315L4, comp...
42
7.2
76 ref|NM_121377.4| Arabidopsis thaliana carbohydrate transporter/ ...
42
7.2
77 gb|AC109200.13| Mus musculus chromosome 8, clone RP23-26G21, com...
42
7.2
78 ref|NM_002357.2| Homo sapiens MAX dimerization protein 1 (MXD1),...
42
7.2
79 ref|NM_017639.2| Homo sapiens dachsous 2 (Drosophila) (DCHS2), t...
42
7.2
80 gb|U41558.1| Caenorhabditis elegans cosmid K02B2, complete sequence
42
7.2
81 gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom...
42
7.2
82 gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, comple...
42
7.2
83 gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Can...
42
7.2
84 dbj|AK095103.1| Homo sapiens cDNA FLJ37784 fis, clone BRHIP2028303
42
7.2
85 gb|BC051693.1| Homo sapiens MAX dimerization protein 1, mRNA (cD...
42
7.2
86 gb|BC098396.1| Homo sapiens MAX dimerization protein 1, mRNA (cD...
42
7.2
87 gb|BC036402.2| Homo sapiens MAX dimerization protein 1, mRNA (cD...
42
7.2
88 gb|AY128800.1| Arabidopsis thaliana transporter-like protein (At...
42
7.2
89 gb|AY092979.1| Arabidopsis thaliana transporter-like protein (At...
42
7.2
90 gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can...
42
7.2
91 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
92 emb|AL353667.10| Human DNA sequence from clone RP11-125B21 on ch...
42
7.2
93 emb|BX546489.13| Zebrafish DNA sequence from clone CH211-258F14 ...
42
7.2
94 dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D...
42
7.2
95 gb|AC079298.8| Homo sapiens BAC clone RP11-9N12 from 4, complete...
42
7.2
96 gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, comple...
42
7.2
97 dbj|AB011484.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
42
7.2
98 dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
42
7.2
99 dbj|AK000054.1| Homo sapiens cDNA FLJ20047 fis, clone COL00577
42
7.2
100 emb|BX833242.1|CNS0A1UG Arabidopsis thaliana Full-length cDNA Co...
42
7.2
101 emb|BX830478.1|CNS0A02Z Arabidopsis thaliana Full-length cDNA Co...
42
7.2
102 emb|BX647835.1|HSM807981 Homo sapiens mRNA; cDNA DKFZp686D0823 (...
42
7.2
103 emb|AL133299.4|CNS01DUN Human chromosome 14 DNA sequence BAC R-6...
42
7.2
104 emb|AL157911.4|CNS01RGB Human chromosome 14 DNA sequence BAC R-1...
42
7.2
>dbj|AK072447.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023109G16, full
insert sequence
Length = 3019
Score = 543 bits (274), Expect = e-151
Identities = 484/554 (87%)
Strand = Plus / Plus
Query: 283 ccgctttaccaatatcttcgctgttccccttcttgtacttcatgataagagacttgcatg 342
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccgctttaccaatatcatcattgttccccttcttgtacttcatgataagagacttgcatg 526
Query: 343 ttgcaaaaagaacagaagatattgggttctatgctgggtttgtaggtgcttcttttatgt 402
|||||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||
Sbjct: 527 ttgcaaaaaggacagaagatattgggttctatgccggctttgtgggtgcttcgtttatgt 586
Query: 403 tcggaagatttttgacttcaaccatttggggaatagcagcagaccgtattgggaggaagc 462
|||| ||| |||||||||||| |||||||||||||||||||| |||||||||||||| |
Sbjct: 587 tcggtcgatgtttgacttcaactatttggggaatagcagcagatcgtattgggaggaaac 646
Query: 463 cagttattctgtttagcgttttctccgtggtagtatttaatactttgtttgggcttagtg 522
||||| || ||||| || ||||| | ||||| |||||||||| | ||||||||||||
Sbjct: 647 cagttgttgtgtttggcattttcgcggtggtcatatttaatacgctatttgggcttagtt 706
Query: 523 tcacctattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcg 582
|||||||||||||||| ||||||||||| || || || |||||||||||||| ||||| |
Sbjct: 707 tcacctattggatggcaatagctacaagattccttcttggtgctttaaatggtttacttg 766
Query: 583 gaccaataagggcttattccattgaagtttgccgacctgaacatgaagctctagcattat 642
| ||||||| ||| ||| | |||||||||||||||||||||||||||||||| ||||| |
Sbjct: 767 ggccaataaaggcctatgctattgaagtttgccgacctgaacatgaagctcttgcattgt 826
Query: 643 cacttgttagcacatcatgggcaataggtctcatcattgggcctgctcttggaggctacc 702
|||||||||| || |||||| ||||||||| || ||||| || ||| ||||||||||||
Sbjct: 827 cacttgttagtacggcatggggaataggtcttataattggtccagctattggaggctacc 886
Query: 703 ttgcactgcctgcagaaaaatatccagatatctttttgcctgactcattctttggaaggt 762
|| ||| ||||||||| |||| ||| || |||||| ||||||||| | |||| |||||
Sbjct: 887 tttcacagcctgcagagaaatttcccaatgtcttttcccctgactcactgtttgcaaggt 946
Query: 763 tcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttataagct 822
|||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| ||| |||
Sbjct: 947 tcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcataggct 1006
Query: 823 gcatatggatgccg 836
||||||||||||||
Sbjct: 1007 gcatatggatgccg 1020
Score = 165 bits (83), Expect = 7e-37
Identities = 221/267 (82%)
Strand = Plus / Plus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtgtctcaggaccaaaga 1379
|||||||||||||||||| |||||||| ||||| || |||||| |||| |||||| ||
Sbjct: 2343 gttaccatcattacaggctgtttcatcctacaaaataatgctgtgcctcaagaccaacga 2402
Query: 1380 ggagcagcaaatgggttagccatgactggaatgtcccttttcaaggcagttgctcctgca 1439
|| || || ||||| || || ||||| ||||||||| |||| |||||||| ||||| |||
Sbjct: 2403 ggggctgctaatggcttggcaatgacaggaatgtccttttttaaggcagtggctccagca 2462
Query: 1440 ggcgccggcattatgttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|| || |||||| ||||||||||||| || ||||||||||| ||| |||| ||||||||
Sbjct: 2463 ggggcgggcattgtgttctcgtgggcacaaaaacgccagcaggcttccttccttccaggt 2522
Query: 1500 gatcatatggtgttctttgtgctgaacatgatagagctcattggacttgtcctcacattc 1559
||||| |||||||||||| | |||| | | ||| | |||||||| ||||||| |||
Sbjct: 2523 gatcagatggtgttctttcttttgaatctcttcgagttgcttggacttatcctcactttc 2582
Query: 1560 aaacccttcctcgccgtgccagagcag 1586
|||||||| || ||||||||| |||||
Sbjct: 2583 aaaccctttctggccgtgccacagcag 2609
Score = 115 bits (58), Expect = 6e-22
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 950 caagaagaacttattcaggaattggccattgatgtcttccataattgtttattgtgtctt 1009
|||||||| |||||| || |||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1082 caagaagagcttattgagcaattggcccttgatgtcctccataattctttattgtgtctt 1141
Query: 1010 ctcctatcatgacatggcttatacagaggt 1039
||||| |||||| |||||||||||||||||
Sbjct: 1142 ctcctttcatgatatggcttatacagaggt 1171
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 1889 tctgtgcatacctattctctttgcatatccatatatgacatacctatcgggacctg 1944
Score = 52.0 bits (26), Expect = 0.007
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1041 ttctctctatgggctgaaagtgacaagaagtatggtgg 1078
|||||||||||||| |||||||||| |||||| |||||
Sbjct: 1716 ttctctctatgggcagaaagtgacaggaagtacggtgg 1753
>gb|AC123528.2 | Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence
Length = 149493
Score = 129 bits (65), Expect = 4e-26
Identities = 140/165 (84%)
Strand = Plus / Minus
Query: 875 tcaaagtgttgaagctttggaggaccatctgattgatccgcaagaaaaggtcgaacaaaa 934
||||| |||||||||||||||| |||| |||||||||| ||||||||| || |||||
Sbjct: 18054 tcaaactgttgaagctttggagagccatttgattgatccagaagaaaaggctgaccaaaa 17995
Query: 935 ttgcagtgcagataccaagaagaacttattcaggaattggccattgatgtcttccataat 994
| | ||| || |||||||| |||||| || |||||||| |||||||| ||||||||
Sbjct: 17994 tggtagtttggactgcaagaagagcttattgagcaattggcccttgatgtcctccataat 17935
Query: 995 tgtttattgtgtcttctcctatcatgacatggcttatacagaggt 1039
| |||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 17934 tctttattgtgtcttctcctttcatgatatggcttatacagaggt 17890
Score = 113 bits (57), Expect = 2e-21
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 385 taggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagcagcag 444
|||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 19441 taggtgcttcgtttatgttcggtcgatgtttgacttcaactatttggggaatagcagcag 19382
Query: 445 accgtattgggaggaagccagttattctgtttagcgttttc 485
| |||||||||||||| |||||| || ||||| || |||||
Sbjct: 19381 atcgtattgggaggaaaccagttgttgtgtttggcattttc 19341
Score = 95.6 bits (48), Expect = 6e-16
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 496 tatttaatactttgtttgggcttagtgtcacctattggatggcgatagctacaaggtttc 555
|||||||||| | |||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 19198 tatttaatacgctatttgggcttagtttcacctattggatggcaatagctacaagattcc 19139
Query: 556 tcctaggtgctttaaatggcttactcggaccaataa 591
| || |||||||||||||| ||||| || |||||||
Sbjct: 19138 ttcttggtgctttaaatggtttacttgggccaataa 19103
Score = 95.6 bits (48), Expect = 6e-16
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 19585 gataagagacttgcatgttgcaaaaaggacagaagatattgggttctatgccggctttgt 19526
Score = 85.7 bits (43), Expect = 5e-13
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 759 aggttcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttata 818
|||||||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||
Sbjct: 18576 aggttcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcata 18517
Query: 819 agctgcatatggatgccgg 837
||||||||||||||||||
Sbjct: 18516 ggctgcatatggatgccgg 18498
Score = 77.8 bits (39), Expect = 1e-10
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 603 attgaagtttgccgacctgaacatgaagctctagcattatcacttgt 649
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 18976 attgaagtttgccgacctgaacatgaagctcttgcattgtcacttgt 18930
Score = 71.9 bits (36), Expect = 8e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
|||||||||||||||||||||||||||| ||| || ||||| |||||||| || |||||
Sbjct: 43962 gataagagacttgcatgttgcaaaaagagtagaggacattggattctatgcaggttttgt 43903
Query: 386 aggt 389
||||
Sbjct: 43902 aggt 43899
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 16687 tctgtgcatacctattctctttgcatatccatatatgacatacctatcgggacctg 16632
Score = 60.0 bits (30), Expect = 3e-05
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| || |||||||||||||||||||||||
Sbjct: 19921 gctttaccaatatcatcattgttccccttcttgtacttcatg 19880
Score = 60.0 bits (30), Expect = 3e-05
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcc 685
||||||||||||||||||||||||||||| |||||||
Sbjct: 43250 gttagcacatcatgggcaataggtctcattgttgggcc 43213
Score = 60.0 bits (30), Expect = 3e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 527 ctattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcggacc 586
|||||||||||||||| ||||| | ||||| ||||| | || ||||||||||| |||||
Sbjct: 43538 ctattggatggcgataactacacgatttcttataggttcattgaatggcttacttggacc 43479
Query: 587 aataag 592
||||||
Sbjct: 43478 aataag 43473
Score = 54.0 bits (27), Expect = 0.002
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1540 ttggacttgtcctcacattcaaacccttcctcgccgtgccagagcag 1586
|||||||| ||||||| ||||||||||| || ||||||||| |||||
Sbjct: 15318 ttggacttatcctcactttcaaaccctttctggccgtgccacagcag 15272
Score = 52.0 bits (26), Expect = 0.007
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
||||||||| ||||||||||||| | |||||||| |||||||
Sbjct: 958 ggcttattctattgaagtttgccaaactgaacatcaagctct 917
Score = 52.0 bits (26), Expect = 0.007
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1041 ttctctctatgggctgaaagtgacaagaagtatggtgg 1078
|||||||||||||| |||||||||| |||||| |||||
Sbjct: 17345 ttctctctatgggcagaaagtgacaggaagtacggtgg 17308
Score = 52.0 bits (26), Expect = 0.007
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 186 gaggggtgccccgggtgcgcgattgaccggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||||| | |||||| ||||||| | || | | |||||||| |||
Sbjct: 24941 gaggggtgccccgggtgcgtcgtcgaccggcggaaggccgcgagctccggcatcccatac 24882
Query: 246 agcagcttcctgtacgtatgggtcgtcaccctctgcac 283
| |||||||| | ||| ||| ||||||| ||||||||
Sbjct: 24881 gggagcttcctcttcgtctggatcgtcacactctgcac 24844
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 658 catgggcaataggtctcatcattgggcctgctcttggaggctacctt 704
|||||| ||||||||| || ||||| || ||| ||||||||||||||
Sbjct: 18843 catggggaataggtcttataattggtccagctattggaggctacctt 18797
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 687 gctcttggaggctaccttgcac 708
||||||||||||||||||||||
Sbjct: 767 gctcttggaggctaccttgcac 746
Score = 44.1 bits (22), Expect = 1.8
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 1454 gttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|||||||||||| || ||||||||||| ||| |||| ||||||||
Sbjct: 15555 gttctcgtgggcacaaaaacgccagcaggcttccttccttccaggt 15510
Score = 44.1 bits (22), Expect = 1.8
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 234 ggcatcccctacagcagcttcctgtacgtatgggtcgtcaccctctgcac 283
|||||||||||||| |||||||| | ||| ||| || |||| ||||||||
Sbjct: 29077 ggcatcccctacaggagcttcctcttcgtctggatcatcacgctctgcac 29028
Score = 44.1 bits (22), Expect = 1.8
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 440 agcagaccgtattgggaggaagccagttat 469
|||||| ||||||||||||||||| |||||
Sbjct: 43729 agcagatcgtattgggaggaagcctgttat 43700
Score = 42.1 bits (21), Expect = 7.2
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtg 1364
|||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 16233 gttaccatcattacaggctgtttcatcctacaaaataatgctgtg 16189
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 129 bits (65), Expect = 4e-26
Identities = 140/165 (84%)
Strand = Plus / Minus
Query: 875 tcaaagtgttgaagctttggaggaccatctgattgatccgcaagaaaaggtcgaacaaaa 934
||||| |||||||||||||||| |||| |||||||||| ||||||||| || |||||
Sbjct: 1663046 tcaaactgttgaagctttggagagccatttgattgatccagaagaaaaggctgaccaaaa 1662987
Query: 935 ttgcagtgcagataccaagaagaacttattcaggaattggccattgatgtcttccataat 994
| | ||| || |||||||| |||||| || |||||||| |||||||| ||||||||
Sbjct: 1662986 tggtagtttggactgcaagaagagcttattgagcaattggcccttgatgtcctccataat 1662927
Query: 995 tgtttattgtgtcttctcctatcatgacatggcttatacagaggt 1039
| |||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 1662926 tctttattgtgtcttctcctttcatgatatggcttatacagaggt 1662882
Score = 113 bits (57), Expect = 2e-21
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 385 taggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagcagcag 444
|||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 1664433 taggtgcttcgtttatgttcggtcgatgtttgacttcaactatttggggaatagcagcag 1664374
Query: 445 accgtattgggaggaagccagttattctgtttagcgttttc 485
| |||||||||||||| |||||| || ||||| || |||||
Sbjct: 1664373 atcgtattgggaggaaaccagttgttgtgtttggcattttc 1664333
Score = 95.6 bits (48), Expect = 6e-16
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 496 tatttaatactttgtttgggcttagtgtcacctattggatggcgatagctacaaggtttc 555
|||||||||| | |||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 1664190 tatttaatacgctatttgggcttagtttcacctattggatggcaatagctacaagattcc 1664131
Query: 556 tcctaggtgctttaaatggcttactcggaccaataa 591
| || |||||||||||||| ||||| || |||||||
Sbjct: 1664130 ttcttggtgctttaaatggtttacttgggccaataa 1664095
Score = 95.6 bits (48), Expect = 6e-16
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1664577 gataagagacttgcatgttgcaaaaaggacagaagatattgggttctatgccggctttgt 1664518
Score = 85.7 bits (43), Expect = 5e-13
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 759 aggttcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttata 818
|||||||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||
Sbjct: 1663568 aggttcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcata 1663509
Query: 819 agctgcatatggatgccgg 837
||||||||||||||||||
Sbjct: 1663508 ggctgcatatggatgccgg 1663490
Score = 79.8 bits (40), Expect = 3e-11
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctctagcattatca 644
||||||||||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 1623591 ggcttattccattgaagtttgtcgacctgaacatcaagctctaggattatca 1623540
Score = 77.8 bits (39), Expect = 1e-10
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 603 attgaagtttgccgacctgaacatgaagctctagcattatcacttgt 649
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1663968 attgaagtttgccgacctgaacatgaagctcttgcattgtcacttgt 1663922
Score = 71.9 bits (36), Expect = 8e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
|||||||||||||||||||||||||||| ||| || ||||| |||||||| || |||||
Sbjct: 1688954 gataagagacttgcatgttgcaaaaagagtagaggacattggattctatgcaggttttgt 1688895
Query: 386 aggt 389
||||
Sbjct: 1688894 aggt 1688891
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 1661679 tctgtgcatacctattctctttgcatatccatatatgacatacctatcgggacctg 1661624
Score = 60.0 bits (30), Expect = 3e-05
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| || |||||||||||||||||||||||
Sbjct: 1664913 gctttaccaatatcatcattgttccccttcttgtacttcatg 1664872
Score = 60.0 bits (30), Expect = 3e-05
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcc 685
||||||||||||||||||||||||||||| |||||||
Sbjct: 1688242 gttagcacatcatgggcaataggtctcattgttgggcc 1688205
Score = 60.0 bits (30), Expect = 3e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 527 ctattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcggacc 586
|||||||||||||||| ||||| | ||||| ||||| | || ||||||||||| |||||
Sbjct: 1688530 ctattggatggcgataactacacgatttcttataggttcattgaatggcttacttggacc 1688471
Query: 587 aataag 592
||||||
Sbjct: 1688470 aataag 1688465
Score = 54.0 bits (27), Expect = 0.002
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1540 ttggacttgtcctcacattcaaacccttcctcgccgtgccagagcag 1586
|||||||| ||||||| ||||||||||| || ||||||||| |||||
Sbjct: 1660310 ttggacttatcctcactttcaaaccctttctggccgtgccacagcag 1660264
Score = 52.0 bits (26), Expect = 0.007
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
||||||||| ||||||||||||| | |||||||| |||||||
Sbjct: 1645244 ggcttattctattgaagtttgccaaactgaacatcaagctct 1645203
Score = 52.0 bits (26), Expect = 0.007
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1041 ttctctctatgggctgaaagtgacaagaagtatggtgg 1078
|||||||||||||| |||||||||| |||||| |||||
Sbjct: 1662337 ttctctctatgggcagaaagtgacaggaagtacggtgg 1662300
Score = 52.0 bits (26), Expect = 0.007
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 186 gaggggtgccccgggtgcgcgattgaccggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||||| | |||||| ||||||| | || | | |||||||| |||
Sbjct: 1669933 gaggggtgccccgggtgcgtcgtcgaccggcggaaggccgcgagctccggcatcccatac 1669874
Query: 246 agcagcttcctgtacgtatgggtcgtcaccctctgcac 283
| |||||||| | ||| ||| ||||||| ||||||||
Sbjct: 1669873 gggagcttcctcttcgtctggatcgtcacactctgcac 1669836
Score = 50.1 bits (25), Expect = 0.030
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 291 ccaatatcttcgctgttccccttcttgtacttcatgataag 331
||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 1632221 ccaatctcttccttgttccccttcttgtacttcatggtaag 1632181
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 808 ttgttcttataagctgcatatgg 830
|||||||||||||||||||||||
Sbjct: 1623112 ttgttcttataagctgcatatgg 1623090
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1455 ttctcgtgggcgcagaaacgccagcatactttcttctttccaggtga 1501
||||| |||||||| ||||| ||| || | |||||||||||||||||
Sbjct: 1642825 ttctcatgggcgcaaaaacgtcaggatgccttcttctttccaggtga 1642779
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 658 catgggcaataggtctcatcattgggcctgctcttggaggctacctt 704
|||||| ||||||||| || ||||| || ||| ||||||||||||||
Sbjct: 1663835 catggggaataggtcttataattggtccagctattggaggctacctt 1663789
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| ||| ||||||| ||| | |||||||||
Sbjct: 1624905 gctttaccaatatcctcgttgttcccattcctctacttcatg 1624864
Score = 44.1 bits (22), Expect = 1.8
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 960 ttattcaggaattggccattgatgtc 985
|||||||| |||||||||||||||||
Sbjct: 1630352 ttattcagaaattggccattgatgtc 1630327
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
|||||| || || |||||||||||| |||||||| |||||||
Sbjct: 1631255 ggcttactctatcgaagtttgccgagctgaacatcaagctct 1631214
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 687 gctcttggaggctaccttgcac 708
||||||||||||||||||||||
Sbjct: 1645053 gctcttggaggctaccttgcac 1645032
Score = 44.1 bits (22), Expect = 1.8
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 1454 gttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|||||||||||| || ||||||||||| ||| |||| ||||||||
Sbjct: 1660547 gttctcgtgggcacaaaaacgccagcaggcttccttccttccaggt 1660502
Score = 44.1 bits (22), Expect = 1.8
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 234 ggcatcccctacagcagcttcctgtacgtatgggtcgtcaccctctgcac 283
|||||||||||||| |||||||| | ||| ||| || |||| ||||||||
Sbjct: 1674069 ggcatcccctacaggagcttcctcttcgtctggatcatcacgctctgcac 1674020
Score = 44.1 bits (22), Expect = 1.8
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 440 agcagaccgtattgggaggaagccagttat 469
|||||| ||||||||||||||||| |||||
Sbjct: 1688721 agcagatcgtattgggaggaagcctgttat 1688692
Score = 42.1 bits (21), Expect = 7.2
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtg 1364
|||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 1661225 gttaccatcattacaggctgtttcatcctacaaaataatgctgtg 1661181
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
Length = 27566993
Score = 119 bits (60), Expect = 4e-23
Identities = 138/164 (84%)
Strand = Plus / Minus
Query: 876 caaagtgttgaagctttggaggaccatctgattgatccgcaagaaaaggtcgaacaaaat 935
|||| |||||||||||||||| |||| |||||||||| ||||||||| || ||||||
Sbjct: 1608346 caaactgttgaagctttggagagccatttgattgatccaaaagaaaaggctgaccaaaat 1608287
Query: 936 tgcagtgcagataccaagaagaacttattcaggaattggccattgatgtcttccataatt 995
| ||| || |||||||| |||||| || |||||||| |||||||| |||||||||
Sbjct: 1608286 ggtagtttggactgcaagaagagcttattgagaaattggcccttgatgtcctccataatt 1608227
Query: 996 gtttattgtgtcttctcctatcatgacatggcttatacagaggt 1039
| |||||||||||||||| |||||| |||||||||||||||||
Sbjct: 1608226 ctctattgtgtcttctcctttcatgatatggcttatacagaggt 1608183
Score = 103 bits (52), Expect = 2e-18
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 385 taggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagcagcag 444
|||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 1609734 taggtgcttcgtttatgttcggtcgatgtttgacttcaactgtttggggaatagcagcag 1609675
Query: 445 accgtattgggaggaagccagttattctgttt 476
| |||||||||||||| |||||| || |||||
Sbjct: 1609674 atcgtattgggaggaaaccagttgttgtgttt 1609643
Score = 95.6 bits (48), Expect = 6e-16
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 496 tatttaatactttgtttgggcttagtgtcacctattggatggcgatagctacaaggtttc 555
|||||||||| | |||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 1609492 tatttaatacgctatttgggcttagtttcacctattggatggcaatagctacaagattcc 1609433
Query: 556 tcctaggtgctttaaatggcttactcggaccaataa 591
| || |||||||||||||| ||||| || |||||||
Sbjct: 1609432 ttcttggtgctttaaatggtttacttgggccaataa 1609397
Score = 95.6 bits (48), Expect = 6e-16
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 1609878 gataagagacttgcatgttgcaaaaaggacagaagatattgggttctatgccggctttgt 1609819
Score = 81.8 bits (41), Expect = 8e-12
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 759 aggttcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttata 818
|||||||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||
Sbjct: 1608867 aggttcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcata 1608808
Query: 819 agctgcatatggatgcc 835
||||||||||||||||
Sbjct: 1608807 ggctgcatatggatgcc 1608791
Score = 77.8 bits (39), Expect = 1e-10
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 603 attgaagtttgccgacctgaacatgaagctctagcattatcacttgt 649
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1609269 attgaagtttgccgacctgaacatgaagctcttgcattgtcacttgt 1609223
Score = 71.9 bits (36), Expect = 8e-09
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctctagcattatca 644
||||||||||||||||||||| |||||||||||| | ||||||| |||||||
Sbjct: 1570339 ggcttattccattgaagtttgtcgacctgaacatcaggctctaggattatca 1570288
Score = 71.9 bits (36), Expect = 8e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
|||||||||||||||||||||||||||| ||| || ||||| |||||||| || |||||
Sbjct: 1639593 gataagagacttgcatgttgcaaaaagagtagaggacattggattctatgcaggttttgt 1639534
Query: 386 aggt 389
||||
Sbjct: 1639533 aggt 1639530
Score = 65.9 bits (33), Expect = 5e-07
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcctgctcttggaggctacctt 704
||||||||| |||||| ||||||||| |||||||| || ||| ||||||||||||||
Sbjct: 1609144 gttagcacagcatggggaataggtcttatcattggtccagctattggaggctacctt 1609088
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 1606979 tctgtgcatacctattctctttgcatatccttatatgacatacctatcgggacctg 1606924
Score = 60.0 bits (30), Expect = 3e-05
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| || |||||||||||||||||||||||
Sbjct: 1610051 gctttaccaatatcatcattgttccccttcttgtacttcatg 1610010
Score = 60.0 bits (30), Expect = 3e-05
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcc 685
||||||||||||||||||||||||||||| |||||||
Sbjct: 1638882 gttagcacatcatgggcaataggtctcattgttgggcc 1638845
Score = 60.0 bits (30), Expect = 3e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 527 ctattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcggacc 586
|||||||||||||||| ||||| | ||||| ||||| | || ||||||||||| |||||
Sbjct: 1639170 ctattggatggcgataactacacgatttcttttaggttcattgaatggcttacttggacc 1639111
Query: 587 aataag 592
||||||
Sbjct: 1639110 aataag 1639105
Score = 54.0 bits (27), Expect = 0.002
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1540 ttggacttgtcctcacattcaaacccttcctcgccgtgccagagcag 1586
|||||||| ||||||| ||||||||||| || ||||| |||||||||
Sbjct: 1605605 ttggacttatcctcactttcaaaccctttctggccgtaccagagcag 1605559
Score = 52.0 bits (26), Expect = 0.007
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
||||||||| ||||||||||||| | |||||||| |||||||
Sbjct: 1597047 ggcttattctattgaagtttgccaaactgaacatcaagctct 1597006
Score = 52.0 bits (26), Expect = 0.007
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 1454 gttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|||||||||||| || |||||||||||| ||| |||| ||||||||
Sbjct: 1605842 gttctcgtgggcacaaaaacgccagcatgcttccttccttccaggt 1605797
Score = 52.0 bits (26), Expect = 0.007
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1041 ttctctctatgggctgaaagtgacaagaagtatggtgg 1078
|||||||||||||| |||||||||| |||||| |||||
Sbjct: 1607637 ttctctctatgggcagaaagtgacaggaagtacggtgg 1607600
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 808 ttgttcttataagctgcatatgg 830
|||||||||||||||||||||||
Sbjct: 1569872 ttgttcttataagctgcatatgg 1569850
Score = 46.1 bits (23), Expect = 0.46
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 959 cttattcaggaattggccattgatgtc 985
||||||||| |||||||||||||||||
Sbjct: 1586048 cttattcagaaattggccattgatgtc 1586022
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1455 ttctcgtgggcgcagaaacgccagcatactttcttctttccaggtga 1501
|||||||||||||| ||||| ||| || | ||||||||||||||||
Sbjct: 1594772 ttctcgtgggcgcaaaaacgtcaggatgccctcttctttccaggtga 1594726
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 687 gctcttggaggctaccttgcac 708
||||||||||||||||||||||
Sbjct: 1596857 gctcttggaggctaccttgcac 1596836
Score = 44.1 bits (22), Expect = 1.8
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 440 agcagaccgtattgggaggaagccagttat 469
|||||| ||||||||||||||||| |||||
Sbjct: 1639361 agcagatcgtattgggaggaagcctgttat 1639332
Score = 42.1 bits (21), Expect = 7.2
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 326 gataagagacttgcatgttgc 346
|||||||||||||||||||||
Sbjct: 1587540 gataagagacttgcatgttgc 1587520
Score = 42.1 bits (21), Expect = 7.2
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 291 ccaatatcttcgctgttccccttcttgtacttcatgataag 331
||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct: 1587664 ccaatctcttccttgttccccttcctgtacttcatggtaag 1587624
Score = 42.1 bits (21), Expect = 7.2
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 528 tattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttact 580
||||||||||| | ||||||||||| | ||||||||| ||||||| |||||
Sbjct: 1597217 tattggatggcacttactacaaggtttgttctaggtgctctaaatggtttact 1597165
Score = 42.1 bits (21), Expect = 7.2
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtg 1364
|||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 1606521 gttaccatcattacaggctgtttcatcctacaaaataatgctgtg 1606477
>emb|BX000498.1 |CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 183385
Score = 119 bits (60), Expect = 4e-23
Identities = 138/164 (84%)
Strand = Plus / Plus
Query: 876 caaagtgttgaagctttggaggaccatctgattgatccgcaagaaaaggtcgaacaaaat 935
|||| |||||||||||||||| |||| |||||||||| ||||||||| || ||||||
Sbjct: 17386 caaactgttgaagctttggagagccatttgattgatccaaaagaaaaggctgaccaaaat 17445
Query: 936 tgcagtgcagataccaagaagaacttattcaggaattggccattgatgtcttccataatt 995
| ||| || |||||||| |||||| || |||||||| |||||||| |||||||||
Sbjct: 17446 ggtagtttggactgcaagaagagcttattgagaaattggcccttgatgtcctccataatt 17505
Query: 996 gtttattgtgtcttctcctatcatgacatggcttatacagaggt 1039
| |||||||||||||||| |||||| |||||||||||||||||
Sbjct: 17506 ctctattgtgtcttctcctttcatgatatggcttatacagaggt 17549
Score = 103 bits (52), Expect = 2e-18
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 385 taggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagcagcag 444
|||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 15998 taggtgcttcgtttatgttcggtcgatgtttgacttcaactgtttggggaatagcagcag 16057
Query: 445 accgtattgggaggaagccagttattctgttt 476
| |||||||||||||| |||||| || |||||
Sbjct: 16058 atcgtattgggaggaaaccagttgttgtgttt 16089
Score = 95.6 bits (48), Expect = 6e-16
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 15854 gataagagacttgcatgttgcaaaaaggacagaagatattgggttctatgccggctttgt 15913
Score = 95.6 bits (48), Expect = 6e-16
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 496 tatttaatactttgtttgggcttagtgtcacctattggatggcgatagctacaaggtttc 555
|||||||||| | |||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 16240 tatttaatacgctatttgggcttagtttcacctattggatggcaatagctacaagattcc 16299
Query: 556 tcctaggtgctttaaatggcttactcggaccaataa 591
| || |||||||||||||| ||||| || |||||||
Sbjct: 16300 ttcttggtgctttaaatggtttacttgggccaataa 16335
Score = 81.8 bits (41), Expect = 8e-12
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 759 aggttcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttata 818
|||||||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||
Sbjct: 16865 aggttcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcata 16924
Query: 819 agctgcatatggatgcc 835
||||||||||||||||
Sbjct: 16925 ggctgcatatggatgcc 16941
Score = 77.8 bits (39), Expect = 1e-10
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 603 attgaagtttgccgacctgaacatgaagctctagcattatcacttgt 649
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 16463 attgaagtttgccgacctgaacatgaagctcttgcattgtcacttgt 16509
Score = 71.9 bits (36), Expect = 8e-09
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctctagcattatca 644
||||||||||||||||||||| |||||||||||| | ||||||| |||||||
Sbjct: 55393 ggcttattccattgaagtttgtcgacctgaacatcaggctctaggattatca 55444
Score = 65.9 bits (33), Expect = 5e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcctgctcttggaggctacctt 704
||||||||| |||||| ||||||||| |||||||| || ||| ||||||||||||||
Sbjct: 16588 gttagcacagcatggggaataggtcttatcattggtccagctattggaggctacctt 16644
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 18753 tctgtgcatacctattctctttgcatatccttatatgacatacctatcgggacctg 18808
Score = 60.0 bits (30), Expect = 3e-05
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| || |||||||||||||||||||||||
Sbjct: 15681 gctttaccaatatcatcattgttccccttcttgtacttcatg 15722
Score = 54.0 bits (27), Expect = 0.002
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1540 ttggacttgtcctcacattcaaacccttcctcgccgtgccagagcag 1586
|||||||| ||||||| ||||||||||| || ||||| |||||||||
Sbjct: 20127 ttggacttatcctcactttcaaaccctttctggccgtaccagagcag 20173
Score = 52.0 bits (26), Expect = 0.007
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1041 ttctctctatgggctgaaagtgacaagaagtatggtgg 1078
|||||||||||||| |||||||||| |||||| |||||
Sbjct: 18095 ttctctctatgggcagaaagtgacaggaagtacggtgg 18132
Score = 52.0 bits (26), Expect = 0.007
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1454 gttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|||||||||||| || |||||||||||| ||| |||| ||||||||
Sbjct: 19890 gttctcgtgggcacaaaaacgccagcatgcttccttccttccaggt 19935
Score = 52.0 bits (26), Expect = 0.007
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
||||||||| ||||||||||||| | |||||||| |||||||
Sbjct: 28685 ggcttattctattgaagtttgccaaactgaacatcaagctct 28726
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1455 ttctcgtgggcgcagaaacgccagcatactttcttctttccaggtga 1501
|||||||||||||| ||||| ||| || | ||||||||||||||||
Sbjct: 30960 ttctcgtgggcgcaaaaacgtcaggatgccctcttctttccaggtga 31006
Score = 46.1 bits (23), Expect = 0.46
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 959 cttattcaggaattggccattgatgtc 985
||||||||| |||||||||||||||||
Sbjct: 39684 cttattcagaaattggccattgatgtc 39710
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 808 ttgttcttataagctgcatatgg 830
|||||||||||||||||||||||
Sbjct: 55860 ttgttcttataagctgcatatgg 55882
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 687 gctcttggaggctaccttgcac 708
||||||||||||||||||||||
Sbjct: 28875 gctcttggaggctaccttgcac 28896
Score = 42.1 bits (21), Expect = 7.2
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtg 1364
|||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 19211 gttaccatcattacaggctgtttcatcctacaaaataatgctgtg 19255
Score = 42.1 bits (21), Expect = 7.2
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 528 tattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttact 580
||||||||||| | ||||||||||| | ||||||||| ||||||| |||||
Sbjct: 28515 tattggatggcacttactacaaggtttgttctaggtgctctaaatggtttact 28567
Score = 42.1 bits (21), Expect = 7.2
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 291 ccaatatcttcgctgttccccttcttgtacttcatgataag 331
||||| ||||| ||||||||||| ||||||||||| ||||
Sbjct: 38068 ccaatctcttccttgttccccttcctgtacttcatggtaag 38108
Score = 42.1 bits (21), Expect = 7.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgc 346
|||||||||||||||||||||
Sbjct: 38192 gataagagacttgcatgttgc 38212
>emb|BX000508.1 |CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 91883
Score = 119 bits (60), Expect = 4e-23
Identities = 138/164 (84%)
Strand = Plus / Plus
Query: 876 caaagtgttgaagctttggaggaccatctgattgatccgcaagaaaaggtcgaacaaaat 935
|||| |||||||||||||||| |||| |||||||||| ||||||||| || ||||||
Sbjct: 84578 caaactgttgaagctttggagagccatttgattgatccaaaagaaaaggctgaccaaaat 84637
Query: 936 tgcagtgcagataccaagaagaacttattcaggaattggccattgatgtcttccataatt 995
| ||| || |||||||| |||||| || |||||||| |||||||| |||||||||
Sbjct: 84638 ggtagtttggactgcaagaagagcttattgagaaattggcccttgatgtcctccataatt 84697
Query: 996 gtttattgtgtcttctcctatcatgacatggcttatacagaggt 1039
| |||||||||||||||| |||||| |||||||||||||||||
Sbjct: 84698 ctctattgtgtcttctcctttcatgatatggcttatacagaggt 84741
Score = 103 bits (52), Expect = 2e-18
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 385 taggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagcagcag 444
|||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 83190 taggtgcttcgtttatgttcggtcgatgtttgacttcaactgtttggggaatagcagcag 83249
Query: 445 accgtattgggaggaagccagttattctgttt 476
| |||||||||||||| |||||| || |||||
Sbjct: 83250 atcgtattgggaggaaaccagttgttgtgttt 83281
Score = 95.6 bits (48), Expect = 6e-16
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 83046 gataagagacttgcatgttgcaaaaaggacagaagatattgggttctatgccggctttgt 83105
Score = 95.6 bits (48), Expect = 6e-16
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 496 tatttaatactttgtttgggcttagtgtcacctattggatggcgatagctacaaggtttc 555
|||||||||| | |||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 83432 tatttaatacgctatttgggcttagtttcacctattggatggcaatagctacaagattcc 83491
Query: 556 tcctaggtgctttaaatggcttactcggaccaataa 591
| || |||||||||||||| ||||| || |||||||
Sbjct: 83492 ttcttggtgctttaaatggtttacttgggccaataa 83527
Score = 81.8 bits (41), Expect = 8e-12
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 759 aggttcccgtatttcttaccatgcttatgcacatcagcctttgctgcgattgttcttata 818
|||||||| ||||||||||| ||||| |||| ||||| ||||||||| ||||||| |||
Sbjct: 84057 aggttcccatatttcttaccctgcttgtgcatatcagtctttgctgctgttgttctcata 84116
Query: 819 agctgcatatggatgcc 835
||||||||||||||||
Sbjct: 84117 ggctgcatatggatgcc 84133
Score = 77.8 bits (39), Expect = 1e-10
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 603 attgaagtttgccgacctgaacatgaagctctagcattatcacttgt 649
|||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 83655 attgaagtttgccgacctgaacatgaagctcttgcattgtcacttgt 83701
Score = 71.9 bits (36), Expect = 8e-09
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgggttctatgctgggtttgt 385
|||||||||||||||||||||||||||| ||| || ||||| |||||||| || |||||
Sbjct: 53331 gataagagacttgcatgttgcaaaaagagtagaggacattggattctatgcaggttttgt 53390
Query: 386 aggt 389
||||
Sbjct: 53391 aggt 53394
Score = 65.9 bits (33), Expect = 5e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcctgctcttggaggctacctt 704
||||||||| |||||| ||||||||| |||||||| || ||| ||||||||||||||
Sbjct: 83780 gttagcacagcatggggaataggtcttatcattggtccagctattggaggctacctt 83836
Score = 63.9 bits (32), Expect = 2e-06
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1214 tctgtgcatacctattctatttgcctatccctacatgacatacctgtcaggacctg 1269
|||||||||||||||||| ||||| ||||| || ||||||||||| || |||||||
Sbjct: 85944 tctgtgcatacctattctctttgcatatccttatatgacatacctatcgggacctg 85999
Score = 60.0 bits (30), Expect = 3e-05
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 527 ctattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcggacc 586
|||||||||||||||| ||||| | ||||| ||||| | || ||||||||||| |||||
Sbjct: 53754 ctattggatggcgataactacacgatttcttttaggttcattgaatggcttacttggacc 53813
Query: 587 aataag 592
||||||
Sbjct: 53814 aataag 53819
Score = 60.0 bits (30), Expect = 3e-05
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcc 685
||||||||||||||||||||||||||||| |||||||
Sbjct: 54042 gttagcacatcatgggcaataggtctcattgttgggcc 54079
Score = 60.0 bits (30), Expect = 3e-05
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| || |||||||||||||||||||||||
Sbjct: 82873 gctttaccaatatcatcattgttccccttcttgtacttcatg 82914
Score = 54.0 bits (27), Expect = 0.002
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1540 ttggacttgtcctcacattcaaacccttcctcgccgtgccagagcag 1586
|||||||| ||||||| ||||||||||| || ||||| |||||||||
Sbjct: 87317 ttggacttatcctcactttcaaaccctttctggccgtaccagagcag 87363
Score = 52.0 bits (26), Expect = 0.007
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1454 gttctcgtgggcgcagaaacgccagcatactttcttctttccaggt 1499
|||||||||||| || |||||||||||| ||| |||| ||||||||
Sbjct: 87080 gttctcgtgggcacaaaaacgccagcatgcttccttccttccaggt 87125
Score = 48.1 bits (24), Expect = 0.12
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1041 ttctctctatgggctgaaagtgacaagaagta 1072
|||||||||||||| |||||||||| ||||||
Sbjct: 85287 ttctctctatgggcagaaagtgacaggaagta 85318
Score = 44.1 bits (22), Expect = 1.8
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 440 agcagaccgtattgggaggaagccagttat 469
|||||| ||||||||||||||||| |||||
Sbjct: 53563 agcagatcgtattgggaggaagcctgttat 53592
Score = 42.1 bits (21), Expect = 7.2
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 1320 gttaccatcattacaggcctcttcatccttcaaaacaacgctgtg 1364
|||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 86402 gttaccatcattacaggctgtttcatcctacaaaataatgctgtg 86446
>ref|NM_001065575.1 | Oryza sativa (japonica cultivar-group) Os07g0180700 (Os07g0180700)
mRNA, complete cds
Length = 3342
Score = 95.6 bits (48), Expect = 6e-16
Identities = 138/168 (82%)
Strand = Plus / Plus
Query: 309 cccttcttgtacttcatgataagagacttgcatgttgcaaaaagaacagaagatattggg 368
|||||| |||| |||||||||||||| ||||||||||| |||| || |||||| |||||
Sbjct: 292 cccttcctgtatttcatgataagagatttgcatgttgccaaaacaatagaagacattgga 351
Query: 369 ttctatgctgggtttgtaggtgcttcttttatgttcggaagatttttgacttcaaccatt 428
|| || | || |||||||||||||| | |||| | || ||| ||| |||||||| |||
Sbjct: 352 ttttacggaggctttgtaggtgcttcatatatgcttggtagagctttaacttcaactatt 411
Query: 429 tggggaatagcagcagaccgtattgggaggaagccagttattctgttt 476
||||| || | |||||| ||||| || |||||||| |||||| |||||
Sbjct: 412 tgggggatggtagcagatcgtatcggcaggaagccggttattgtgttt 459
Score = 83.8 bits (42), Expect = 2e-12
Identities = 105/126 (83%)
Strand = Plus / Plus
Query: 1374 caaagaggagcagcaaatgggttagccatgactggaatgtcccttttcaaggcagttgct 1433
||||||||| | |||||||| ||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 1435 caaagaggaacggcaaatggtttagccaccactctaatgtcctttttcaaggcatttgct 1494
Query: 1434 cctgcaggcgccggcattatgttctcgtgggcgcagaaacgccagcatactttcttcttt 1493
|| ||||| || || ||| |||| || |||||||| || || || ||| |||||||||||
Sbjct: 1495 ccagcaggagctggtattgtgttttcatgggcgcaaaagcgtcaacatgctttcttcttt 1554
Query: 1494 ccaggt 1499
||||||
Sbjct: 1555 ccaggt 1560
Score = 69.9 bits (35), Expect = 3e-08
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 968 gaattggccattgatgtcttccataattgtttattgtgtcttctcctatcatgacatggc 1027
|||||||||||||||||| || || ||| | || ||| || ||| || | |||| |||||
Sbjct: 1029 gaattggccattgatgtcatctatcattctctactgtatcatctgctttgatgatatggc 1088
Query: 1028 ttatacagaggtgttctctctatgggctgaaagtgacaagaagtatggtgg 1078
||||||||| | || ||||||||| |||||||||| || |||||||||||
Sbjct: 1089 atatacagagatattttctctatggtctgaaagtgataaaaagtatggtgg 1139
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 495 gtatttaatactttgtttgggct 517
|||||||||||||||||||||||
Sbjct: 561 gtatttaatactttgtttgggct 583
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 213 cggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||| || ||| ||||||||
Sbjct: 196 cggaggaaggcggagaatcccggcgtcccctac 228
>dbj|AK065334.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002H07, full
insert sequence
Length = 3343
Score = 95.6 bits (48), Expect = 6e-16
Identities = 138/168 (82%)
Strand = Plus / Plus
Query: 309 cccttcttgtacttcatgataagagacttgcatgttgcaaaaagaacagaagatattggg 368
|||||| |||| |||||||||||||| ||||||||||| |||| || |||||| |||||
Sbjct: 293 cccttcctgtatttcatgataagagatttgcatgttgccaaaacaatagaagacattgga 352
Query: 369 ttctatgctgggtttgtaggtgcttcttttatgttcggaagatttttgacttcaaccatt 428
|| || | || |||||||||||||| | |||| | || ||| ||| |||||||| |||
Sbjct: 353 ttttacggaggctttgtaggtgcttcatatatgcttggtagagctttaacttcaactatt 412
Query: 429 tggggaatagcagcagaccgtattgggaggaagccagttattctgttt 476
||||| || | |||||| ||||| || |||||||| |||||| |||||
Sbjct: 413 tgggggatggtagcagatcgtatcggcaggaagccggttattgtgttt 460
Score = 83.8 bits (42), Expect = 2e-12
Identities = 105/126 (83%)
Strand = Plus / Plus
Query: 1374 caaagaggagcagcaaatgggttagccatgactggaatgtcccttttcaaggcagttgct 1433
||||||||| | |||||||| ||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 1436 caaagaggaacggcaaatggtttagccaccactctaatgtcctttttcaaggcatttgct 1495
Query: 1434 cctgcaggcgccggcattatgttctcgtgggcgcagaaacgccagcatactttcttcttt 1493
|| ||||| || || ||| |||| || |||||||| || || || ||| |||||||||||
Sbjct: 1496 ccagcaggagctggtattgtgttttcatgggcgcaaaagcgtcaacatgctttcttcttt 1555
Query: 1494 ccaggt 1499
||||||
Sbjct: 1556 ccaggt 1561
Score = 69.9 bits (35), Expect = 3e-08
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 968 gaattggccattgatgtcttccataattgtttattgtgtcttctcctatcatgacatggc 1027
|||||||||||||||||| || || ||| | || ||| || ||| || | |||| |||||
Sbjct: 1030 gaattggccattgatgtcatctatcattctctactgtatcatctgctttgatgatatggc 1089
Query: 1028 ttatacagaggtgttctctctatgggctgaaagtgacaagaagtatggtgg 1078
||||||||| | || ||||||||| |||||||||| || |||||||||||
Sbjct: 1090 atatacagagatattttctctatggtctgaaagtgataaaaagtatggtgg 1140
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 495 gtatttaatactttgtttgggct 517
|||||||||||||||||||||||
Sbjct: 562 gtatttaatactttgtttgggct 584
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 213 cggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||| || ||| ||||||||
Sbjct: 197 cggaggaaggcggagaatcccggcgtcccctac 229
>gb|AC138454.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24,
complete sequence
Length = 162385
Score = 79.8 bits (40), Expect = 3e-11
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctctagcattatca 644
||||||||||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 138127 ggcttattccattgaagtttgtcgacctgaacatcaagctctaggattatca 138076
Score = 52.0 bits (26), Expect = 0.007
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
||||||||| ||||||||||||| | |||||||| |||||||
Sbjct: 159780 ggcttattctattgaagtttgccaaactgaacatcaagctct 159739
Score = 50.1 bits (25), Expect = 0.030
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 291 ccaatatcttcgctgttccccttcttgtacttcatgataag 331
||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 146757 ccaatctcttccttgttccccttcttgtacttcatggtaag 146717
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 808 ttgttcttataagctgcatatgg 830
|||||||||||||||||||||||
Sbjct: 137648 ttgttcttataagctgcatatgg 137626
Score = 46.1 bits (23), Expect = 0.46
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1455 ttctcgtgggcgcagaaacgccagcatactttcttctttccaggtga 1501
||||| |||||||| ||||| ||| || | |||||||||||||||||
Sbjct: 157361 ttctcatgggcgcaaaaacgtcaggatgccttcttctttccaggtga 157315
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 285 gctttaccaatatcttcgctgttccccttcttgtacttcatg 326
|||||||||||||| ||| ||||||| ||| | |||||||||
Sbjct: 139441 gctttaccaatatcctcgttgttcccattcctctacttcatg 139400
Score = 44.1 bits (22), Expect = 1.8
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 960 ttattcaggaattggccattgatgtc 985
|||||||| |||||||||||||||||
Sbjct: 144888 ttattcagaaattggccattgatgtc 144863
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 593 ggcttattccattgaagtttgccgacctgaacatgaagctct 634
|||||| || || |||||||||||| |||||||| |||||||
Sbjct: 145791 ggcttactctatcgaagtttgccgagctgaacatcaagctct 145750
Score = 44.1 bits (22), Expect = 1.8
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 687 gctcttggaggctaccttgcac 708
||||||||||||||||||||||
Sbjct: 159589 gctcttggaggctaccttgcac 159568
>gb|AC169378.2 | Sorghum bicolor clone SB_BBc0007L02, complete sequence
Length = 138518
Score = 65.9 bits (33), Expect = 5e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 648 gttagcacatcatgggcaataggtctcatcattgggcctgctcttggaggctaccttgca 707
|||||||||||||||||||||||||| || |||||||| ||| |||| || ||||| |||
Sbjct: 1662 gttagcacatcatgggcaataggtcttattattgggccagctattggtggatacctcgca 1721
Query: 708 c 708
|
Sbjct: 1722 c 1722
Score = 58.0 bits (29), Expect = 1e-04
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 528 tattggatggcgatagctacaaggtttctcctaggtgctttaaatggcttactcggacca 587
||||||||||||||||| ||||| || || || ||| |||||||||| ||||| || |||
Sbjct: 1364 tattggatggcgatagcaacaagattccttcttggttctttaaatggtttacttggccca 1423
Query: 588 ataag 592
|||||
Sbjct: 1424 ataag 1428
Score = 48.1 bits (24), Expect = 0.12
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 ggaggggtgccccgggtgcgcgattgaccggaggaaggcg 224
|||||| ||||||||||||||||| || ||| ||||||||
Sbjct: 22374 ggagggttgccccgggtgcgcgatggagcggcggaaggcg 22413
Score = 44.1 bits (22), Expect = 1.8
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 440 agcagaccgtattgggaggaagccagttat 469
|||||| ||||||||||||||||| |||||
Sbjct: 1159 agcagatcgtattgggaggaagcccgttat 1188
Score = 44.1 bits (22), Expect = 1.8
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1044 tctctatgggctgaaagtgacaagaagtatggtggact 1081
||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 10247 tctctatgggccgaaagcgacaaaaagtatggaggact 10284
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
Length = 29644043
Score = 56.0 bits (28), Expect = 5e-04
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 381 tttgtaggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagca 440
|||||||||||||| | |||| | || ||| ||| |||||||| |||||||| || | |
Sbjct: 4280435 tttgtaggtgcttcatatatgcttggtagagctttaacttcaactatttgggggatggta 4280494
Query: 441 gcagaccgtattgggaggaagccagttattctgttt 476
||||| ||||| || |||||||| |||||| |||||
Sbjct: 4280495 gcagatcgtatcggcaggaagccggttattgtgttt 4280530
Score = 56.0 bits (28), Expect = 5e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1374 caaagaggagcagcaaatgggttagccatgactggaatgtcccttttcaaggcagttgct 1433
||||||||| | |||||||| ||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 4283430 caaagaggaacggcaaatggtttagccaccactctaatgtcctttttcaaggcatttgct 4283489
Query: 1434 cctgcagg 1441
|| |||||
Sbjct: 4283490 ccagcagg 4283497
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 495 gtatttaatactttgtttgggct 517
|||||||||||||||||||||||
Sbjct: 4280632 gtatttaatactttgtttgggct 4280654
Score = 46.1 bits (23), Expect = 0.46
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1044 tctctatgggctgaaagtgacaagaagtatggtgg 1078
||||||||| |||||||||| || |||||||||||
Sbjct: 4282420 tctctatggtctgaaagtgataaaaagtatggtgg 4282454
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgg 367
||||||||| ||||||||||| |||| || |||||| |||||
Sbjct: 4280243 gataagagatttgcatgttgccaaaacaatagaagacattgg 4280284
Score = 44.1 bits (22), Expect = 1.8
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 968 gaattggccattgatgtcttccataattgtttattgtgtcttctcctatcatgacatggc 1027
|||||||||||||||||| || || ||| | || ||| || ||| || | |||| |||||
Sbjct: 4281794 gaattggccattgatgtcatctatcattctctactgtatcatctgctttgatgatatggc 4281853
Query: 1028 ttatacagaggtgt 1041
|||||||||||||
Sbjct: 4281854 atatacagaggtgt 4281867
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 213 cggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||| || ||| ||||||||
Sbjct: 4272391 cggaggaaggcggagaatcccggcgtcccctac 4272423
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 650 tagcacatcatgggcaataggtctcatcattgg 682
|||||||||||||||||| ||||| || |||||
Sbjct: 4280957 tagcacatcatgggcaatgggtcttattattgg 4280989
>dbj|AP003800.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1014_E09
Length = 184624
Score = 56.0 bits (28), Expect = 5e-04
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 381 tttgtaggtgcttcttttatgttcggaagatttttgacttcaaccatttggggaatagca 440
|||||||||||||| | |||| | || ||| ||| |||||||| |||||||| || | |
Sbjct: 101489 tttgtaggtgcttcatatatgcttggtagagctttaacttcaactatttgggggatggta 101548
Query: 441 gcagaccgtattgggaggaagccagttattctgttt 476
||||| ||||| || |||||||| |||||| |||||
Sbjct: 101549 gcagatcgtatcggcaggaagccggttattgtgttt 101584
Score = 56.0 bits (28), Expect = 5e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1374 caaagaggagcagcaaatgggttagccatgactggaatgtcccttttcaaggcagttgct 1433
||||||||| | |||||||| ||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 104484 caaagaggaacggcaaatggtttagccaccactctaatgtcctttttcaaggcatttgct 104543
Query: 1434 cctgcagg 1441
|| |||||
Sbjct: 104544 ccagcagg 104551
Score = 46.1 bits (23), Expect = 0.46
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 495 gtatttaatactttgtttgggct 517
|||||||||||||||||||||||
Sbjct: 101686 gtatttaatactttgtttgggct 101708
Score = 46.1 bits (23), Expect = 0.46
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1044 tctctatgggctgaaagtgacaagaagtatggtgg 1078
||||||||| |||||||||| || |||||||||||
Sbjct: 103474 tctctatggtctgaaagtgataaaaagtatggtgg 103508
Score = 44.1 bits (22), Expect = 1.8
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 326 gataagagacttgcatgttgcaaaaagaacagaagatattgg 367
||||||||| ||||||||||| |||| || |||||| |||||
Sbjct: 101297 gataagagatttgcatgttgccaaaacaatagaagacattgg 101338
Score = 44.1 bits (22), Expect = 1.8
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 968 gaattggccattgatgtcttccataattgtttattgtgtcttctcctatcatgacatggc 1027
|||||||||||||||||| || || ||| | || ||| || ||| || | |||| |||||
Sbjct: 102848 gaattggccattgatgtcatctatcattctctactgtatcatctgctttgatgatatggc 102907
Query: 1028 ttatacagaggtgt 1041
|||||||||||||
Sbjct: 102908 atatacagaggtgt 102921
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 213 cggaggaaggcggagaacccaggcatcccctac 245
||||||||||||||||| || ||| ||||||||
Sbjct: 93445 cggaggaaggcggagaatcccggcgtcccctac 93477
Score = 42.1 bits (21), Expect = 7.2
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 650 tagcacatcatgggcaataggtctcatcattgg 682
|||||||||||||||||| ||||| || |||||
Sbjct: 102011 tagcacatcatgggcaatgggtcttattattgg 102043
>emb|AL157911.4 |CNS01RGB Human chromosome 14 DNA sequence BAC R-16B13 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 175548
Score = 42.1 bits (21), Expect = 7.2
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1715 tacatgtattttgtatgtaac 1735
|||||||||||||||||||||
Sbjct: 19771 tacatgtattttgtatgtaac 19791
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 349,439,640
Number of extensions: 18310880
Number of successful extensions: 345634
Number of sequences better than 10.0: 104
Number of HSP's gapped: 345616
Number of HSP's successfully gapped: 311
Length of query: 1891
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1868
Effective length of database: 18,503,978,556
Effective search space: 34565431942608
Effective search space used: 34565431942608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)