>LOC_Os02g57990:12002.t05370:unspliced-genomic 3-beta hydroxysteroid dehydrogenase/isomerase, putative, expressed|
Length = 3725
Score = 137 bits (294), Expect(5) = e-103
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +3 / +3
Query: 117 VYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSL 296
VYEGVKSFYKE DETLPVNMYGKSKVAAEKF+ ++CSNYAILRSSIIYGPQT+SPV KSL
Sbjct: 2169 VYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSL 2348
Query: 297 PIQ 305
PIQ
Sbjct: 2349 PIQ 2357
Score = 99.1 bits (210), Expect(5) = e-103
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = +3 / +1
Query: 294 LPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKI 443
L +QWMD+VLSQGQQV FFNDE+RCPVYVKD+VDV+LSLTKSWL+ K++
Sbjct: 2494 LCMQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLAGIKRL 2643
Score = 82.6 bits (174), Expect(5) = e-103
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 3 CEMDPAAAMATNVPSSLVDWSLSFGNDKTLLIHLSTDQ 116
CE DPAAAMATNVPSSLV W LSFGND TLLIHLSTDQ
Sbjct: 1825 CETDPAAAMATNVPSSLVTWLLSFGNDNTLLIHLSTDQ 1938
Score = 80.8 bits (170), Expect(5) = e-103
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +3 / +2
Query: 561 VNRGVASPPDISMDITKLTQTLGIKPITFLDGVRATLDTEA 683
V+RGVASPPDISMDITKLTQ LGIKPI+F DGVRATL EA
Sbjct: 3362 VDRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEA 3484
Score = 68.0 bits (142), Expect(5) = e-103
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +2 / +2
Query: 428 RWQKDSGTSECRRSR*GFETADG*VCC*SSWI*QVDNQICACIIG 562
RW S T ECR +R* +TADG*+CC* SWI* NQIC C IG
Sbjct: 2774 RW*SCSSTPECRWTR*SLKTADG*ICC*CSWI*SFYNQICICFIG 2908
Score = 105 bits (223), Expect(5) = 1e-88
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = -2 / -1
Query: 305 LNRERLLHRRDSLWPINNAASQDRIV*AFISNELLCSNF*FAIHVHWQCLIPLFVEGFHP 126
LN +R HRR+ LWPINN ASQD IV*A +N+LLCSNF F++HVHWQ LI LFVEGF+
Sbjct: 2357 LNWKRFCHRRNCLWPINNTASQDCIV*ALFNNKLLCSNFRFSVHVHWQGLIILFVEGFYS 2178
Query: 125 FIN 117
+N
Sbjct: 2177 LVN 2169
Score = 84.5 bits (178), Expect(5) = 1e-88
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = -3 / -2
Query: 562 TDDAGTDLIIDLLYPRTSATDSAICSLETLSAPPTFRSTRIFLPS 428
TD+A TDLII+ LYPRTSATDSAICSLETLS PPTFRST LPS
Sbjct: 2908 TDEADTDLIIE*LYPRTSATDSAICSLETLSGPPTFRST*TALPS 2774
Score = 80.8 bits (170), Expect(5) = 1e-88
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -3 / -3
Query: 691 HVLASVSSVALTPSRNVIGLIPSV*VSLVISMDMSGGEATPRLT 560
HVLAS +SVALTPS N IGLIPS+ VSLVISMDMSGGEATPR T
Sbjct: 3492 HVLASAASVALTPS*NEIGLIPSIWVSLVISMDMSGGEATPRST 3361
Score = 79.9 bits (168), Expect(5) = 1e-88
Identities = 35/44 (79%), Positives = 35/44 (79%)
Frame = -3 / -1
Query: 424 NQLFVKDNITSTISFT*TGQRYSSLKKSTCWPCERTLSIH*IGR 293
N FVKDN TSTISFT*TG R SSLK TCWPCERTLSIH I R
Sbjct: 2624 NHDFVKDNTTSTISFT*TGHRNSSLKN*TCWPCERTLSIHCIQR 2493
Score = 68.0 bits (142), Expect(5) = 1e-88
Identities = 30/38 (78%), Positives = 36/38 (94%)
Frame = -3 / -1
Query: 115 *SVER*IKRVLSFPKLSDQSTSEEGTLVAMAAAGSISH 2
*SVER I+RVLSFPKL++Q TS+EGTLVA+AAAGS+SH
Sbjct: 1937 *SVERWIRRVLSFPKLNNQVTSDEGTLVAIAAAGSVSH 1824
Score = 86.8 bits (183), Expect(5) = 1e-76
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +3 / +3
Query: 414 KSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSV 563
K+ +DGK ++VLLNVGG DRVSRLQMAESVA+VRGYS SIIKSV ASSV
Sbjct: 2760 KAHAADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSV 2909
Score = 84.9 bits (179), Expect(5) = 1e-76
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1 / +1
Query: 115 KFMKG*NPSTKRGMRHCQ*TCMANQKLLQRSSLLINAQTMRS*EAALFMGHK 270
+F + *NPSTKR MR CQ*TC N KLLQRS LL NAQTM+S*EA LFMGHK
Sbjct: 2167 QFTRE*NPSTKRMMRPCQ*TCTENLKLLQRSLLLNNAQTMQS*EAVLFMGHK 2322
Score = 79.0 bits (166), Expect(5) = 1e-76
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +2 / +1
Query: 560 G*PGCSFSARHIHGYHQANSDARYQADYISGWSQSYT*HGSQYM 691
G*PGCSFS RHIHGYHQ N +A YQA++IS WSQSYT S YM
Sbjct: 3361 G*PGCSFSTRHIHGYHQTNPNAWYQANFISRWSQSYTCCRS*YM 3492
Score = 75.8 bits (159), Expect(5) = 1e-76
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +2 / +3
Query: 269 NCLSCGEVSPYSVDG*CSLTRPTS*FL***VPLPGLCKRYSGCNIVFNKKLVIRWQK 439
+CL+ + Y+VDG*CS TRPTS L***VP+ LCKRY GC++VF+K +V R++K
Sbjct: 2469 DCLTKKVLPLYAVDG*CSFTRPTSSIL***VPVSCLCKRYGGCSVVFDKIMVSRYKK 2639
Score = 51.0 bits (105), Expect(5) = 1e-76
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2 / +3
Query: 2 VRNGPSCCHGY*CAFFACRLVTELRE*QDPFDSSLHRS 115
+RNG CC+GY*C F C LV +L E*Q SL+RS
Sbjct: 1824 MRNGSCCCYGY*CTFITCHLVVKLWE*QHSSYPSLNRS 1937
Score = 121 bits (259), Expect(4) = 6e-72
Identities = 54/73 (73%), Positives = 61/73 (83%)
Frame = -3 / -2
Query: 304 *IGRDFSTGETVCGP*IMLLLKIA*FEHLSVTNFSAATFDLPYMFTGSVSSPSL*KDFTP 125
*IGRDF+TGE VCGP*I+LLLKIA*FEH S+ NFSAAT D PYMFTG VSS SL*KDFTP
Sbjct: 2356 *IGRDFATGEIVCGP*IILLLKIA*FEHCSIINFSAATLDFPYMFTGKVSSSSL*KDFTP 2177
Query: 124 S*T*SVER*IKRV 86
S*T + *+ ++
Sbjct: 2176 S*TGTTRE*LGKI 2138
Score = 79.9 bits (168), Expect(4) = 6e-72
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 695 ISCTGFRVKCSSDSIQKCNRLDTERLS*LGDIHGYVWRRSYTPVN 561
+SCT F KCSSDSI K N LDT+ L * GDIHGYVW RSYTPVN
Sbjct: 3496 VSCTSFCSKCSSDSILK*NWLDTKHLG*FGDIHGYVWWRSYTPVN 3362
Score = 77.6 bits (163), Expect(4) = 6e-72
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -1 / -2
Query: 441 SFCHLITNFLLKTILHPLYLLHKPGSGTHH*RNQLVGLVREHYPST 304
+F +L+T L KT LHP YLLHK +GTHH*R +LVGLV+EHYPST
Sbjct: 2641 TFLYLLTMILSKTTLHPPYLLHKQDTGTHH*RIELVGLVKEHYPST 2504
Score = 62.0 bits (129), Expect(4) = 6e-72
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = -2 / -1
Query: 560 R*CRHRFDYRLAISTNFSNRLSHLQSRNPICSAYIQKYPNLFAI 429
R* R+RFDYR+ ISTN SNR SHLQS + I S IQ+Y N F I
Sbjct: 2906 R*SRYRFDYRMTISTNISNRFSHLQS*DSIWSTDIQEYLNSFTI 2775
Score = 97.3 bits (206), Expect(6) = 2e-51
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +2 / +2
Query: 113 SSL*RGEILLQRGG*DTASEHVWQIKSCCREVRY**MLKLCDLEKQHYLWATNCLSCGEV 292
+SL +ILLQRG *D ASEHV +I SCCREV Y* MLKLC+LEKQ+YLWATN SCG++
Sbjct: 2165 TSLRGSKILLQRG**DLASEHVRKI*SCCREVYY*TMLKLCNLEKQYYLWATNNFSCGKI 2344
Query: 293 SPYS 304
S S
Sbjct: 2345 SSNS 2356
Score = 62.5 bits (130), Expect(6) = 2e-51
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 307 GWIMFSHKANKLISLMMSTAARFM*KI*WM*YCL*QKVGYQMAKRF 444
GWI+F HKANK SLMMS+ FM*KI WM* CL*Q G Q+ K +
Sbjct: 2507 GWIVFFHKANKFNSLMMSSGVLFM*KIWWM*CCL*QNHG*QV*KGY 2644
Score = 58.8 bits (122), Expect(6) = 2e-51
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +1 / +1
Query: 427 QMAKRFGYF*M*AEQIGFRDCRWLSLLLKFVDIASR*SNLCLHHR 561
QM K F Y *M +QI +DCRWL+LLL FVDI *SNL L HR
Sbjct: 2773 QMVKLFKYS*MSVDQIESQDCRWLNLLLMFVDIVIL*SNLYLLHR 2907
Score = 35.9 bits (72), Expect(6) = 2e-51
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 559 RLTGV*LLRQTYPWI 603
RLTGV*LL QTYPWI
Sbjct: 3360 RLTGV*LLHQTYPWI 3404
Score = 33.1 bits (66), Expect(6) = 2e-51
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 643 HFWMESELHLTRKPVHD 693
HF MESELHL +K VHD
Sbjct: 3444 HFKMESELHLLQKLVHD 3494
Score = 23.5 bits (45), Expect(6) = 2e-51
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 55 SIGH*ASGMTRPF*FISPQIK 117
S+G *A GMT F IS QIK
Sbjct: 1877 SLGC*ALGMTTLFLSISQQIK 1939
Score = 88.6 bits (187), Expect(4) = 3e-48
Identities = 45/68 (66%), Positives = 46/68 (67%)
Frame = -1 / -3
Query: 318 HYPSTE*GETSPQERQFVAHK*CCFSRSHSLSIYQ*RTSLQQLLICHTCSLAVSHPPLCR 139
H E E PQE+ FVAHK* CFSR HSLSI Q* TSLQQL I TCSLA SH PLCR
Sbjct: 2370 HLTIPELEEILPQEKLFVAHK*YCFSRLHSLSIVQ**TSLQQL*IFRTCSLARSHHPLCR 2191
Query: 138 RISPLHKL 115
RI KL
Sbjct: 2190 RILLPRKL 2167
Score = 70.3 bits (147), Expect(4) = 3e-48
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 696 NIMYWLPCQV*L*LHPEM*SA*YRASELAW*YPWICLAEKLHPG*P 559
++MY L QV*L*LH EM A*Y+A L W*YPWICL EKLHPG P
Sbjct: 3497 SVMY*LLQQV*L*LHLEMKLA*YQAFGLVW*YPWICLVEKLHPGQP 3360
Score = 55.1 bits (114), Expect(4) = 3e-48
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -1 / -3
Query: 561 PMMQAQI*LSTCYIHELQQQTQPSAVSKPYLLRLHSEVPESFCHL 427
PM Q QI*L YIHE QQQ QPSAV + YL+ HS V E HL
Sbjct: 2907 PMKQIQI*L*NDYIHEHQQQIQPSAVLRLYLVHRHSGVLEQLYHL 2773
Score = 46.9 bits (96), Expect(4) = 3e-48
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 116 LICGEMNQKGLVIPEAQ*PIDKRRRHISSHGSSWVHFA 3
LIC EM++K +VIP+A P DK R+ISSH SS + FA
Sbjct: 1938 LIC*EMDKKSVVIPKA*QPSDK**RYISSHSSSRIRFA 1825
Score = 75.8 bits (159), Expect(2) = 8e-19
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -2 / -3
Query: 425 *PTFC*RQYYIHYIFYINRAAVLIIKEINLLAL*ENIIHPLNRERLL 285
*P FC RQ+YIH+IFYINR LIIKE+NLLAL*+N IHPL+ E L
Sbjct: 2625 *P*FCQRQHYIHHIFYINRTPELIIKELNLLAL*KNTIHPLHTEEEL 2485
Score = 43.2 bits (88), Expect(2) = 8e-19
Identities = 22/45 (48%), Positives = 25/45 (55%)
Frame = -1 / -2
Query: 138 RISPLHKLDLWRDESKGSCHSRSSVTNRQAKKAH**PWQQLGPFR 4
R+ LDL RD + CHS+S T Q K H**P QQ PFR
Sbjct: 1960 RVERAVHLDLLRDG*EECCHSQSLTTK*QVMKVH**P*QQQDPFR 1826
>LOC_Os05g13950:12005.t01171:unspliced-genomic eukaryotic translation initiation factor 3 subunit 6-interacting|
protein, putative, expressed
Length = 6252
Score = 25.4 bits (49), Expect(2) = 8.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 533 RLAISTNFSNRLSHLQSRNPICSAY 459
R + S++ + R SHL S++P C Y
Sbjct: 584 RRSPSSSSTTRSSHLPSQSPFCFYY 658
Score = 23.1 bits (44), Expect(2) = 8.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2 / +2
Query: 416 FC*RQYYIHYIFYINR 369
FC YYIH F +N+
Sbjct: 644 FCFYYYYIHRSFRVNQ 691
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 415,999,747
Number of extensions: 7255807
Number of successful extensions: 24066
Number of sequences better than 10.0: 23
Length of query: 314
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 264
Effective length of database: 52,799,986
Effective search space: 13939196304
Effective search space used: 13939196304
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)