ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf53f07 |
|---|---|
| Clone Library Name | barley_pub |
>Q5R4E0:MAT2B_PONPY Methionine adenosyltransferase 2 subunit beta - Pongo pygmaeus| (Orangutan) Length = 334 Score = 84.0 bits (206), Expect = 8e-16 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P AA NV +S L + + G LI++S+D V++G Y+E D P+N+Y Sbjct: 103 ENQPDAASQLNVDASGNLAKEAAAVG---AFLIYISSDYVFDGTNPPYREEDIPAPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ EK V + A+LR I+YG V +E+S D V + + + + Sbjct: 160 GKTKLDGEKAVLENNLGAAVLRIPILYG--EVEKLEESAVTVMFDKVQFSNKSANMDHWQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L + + D I+ + G +++++ +MA ++A+ S + Sbjct: 218 QRFPTHVKDVATVCRQLAEKRMLD-PSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + S V G P + +D +KL +TLGI T F G++ +L Sbjct: 277 RPITDSPV-LGAQRPRNAQLDCSKL-ETLGIGQRTPFRIGIKESL 319
>Q9NZL9:MAT2B_HUMAN Methionine adenosyltransferase 2 subunit beta - Homo sapiens| (Human) Length = 334 Score = 84.0 bits (206), Expect = 8e-16 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P AA NV +S L + + G LI++S+D V++G Y+E D P+N+Y Sbjct: 103 ENQPDAASQLNVDASGNLAKEAAAVG---AFLIYISSDYVFDGTNPPYREEDIPAPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ EK V + A+LR I+YG V +E+S D V + + + + Sbjct: 160 GKTKLDGEKAVLENNLGAAVLRIPILYG--EVEKLEESAVTVMFDKVQFSNKSANMDHWQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L + + D I+ + G +++++ +MA ++A+ S + Sbjct: 218 QRFPTHVKDVATVCRQLAEKRMLD-PSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + S V G P + +D +KL +TLGI T F G++ +L Sbjct: 277 RPITDSPV-LGAQRPRNAQLDCSKL-ETLGIGQRTPFRIGIKESL 319
>Q99LB6:MAT2B_MOUSE Methionine adenosyltransferase 2 subunit beta - Mus musculus| (Mouse) Length = 334 Score = 83.6 bits (205), Expect = 1e-15 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P AA NV +S L + + G LI++S+D V++G Y E D P+N+Y Sbjct: 103 ESQPDAASQLNVGASGNLAKEAAAIG---AFLIYISSDYVFDGTNPPYTEEDIPSPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ EK V + A+LR ++YG V +E+S D V + + + + Sbjct: 160 GKTKLDGEKAVLENNLGAAVLRIPVLYG--EVEKLEESAVTVMFDKVQFSNKSANMDHWQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L + + D I+ + G +++++ +MA ++A+ S + Sbjct: 218 QRFPTHVKDVASVCRQLAEKRMLD-PSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + S V G P + +D +KL +TLGI T F G++ +L Sbjct: 277 RPITDSPV-IGAQRPKNAQLDCSKL-ETLGIGQRTPFRTGIKESL 319
>Q5U2R0:MAT2B_RAT Methionine adenosyltransferase 2 subunit beta - Rattus norvegicus| (Rat) Length = 334 Score = 82.8 bits (203), Expect = 2e-15 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P AA NV +S L + + G LI++S+D V++G Y E D P+N+Y Sbjct: 103 ESQPDAASQLNVGASGNLAKEAAAIG---AFLIYISSDYVFDGTNPPYTEEDIPSPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ EK V + A+LR ++YG V +E+S D V + + + + Sbjct: 160 GKTKLDGEKAVLENNLGAAVLRIPVLYG--EVEKLEESAVTVMFDKVQFSNKSANMDHWQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L + + D I+ + G +++++ +MA ++A+ S + Sbjct: 218 QRFPTHVKDVASVCRQLAEKRMLD-PSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + S V G P + +D +KL +TLGI T F G++ +L Sbjct: 277 RPITDSPV-IGAQRPKNAQLDCSKL-ETLGIGQRTPFRIGIKESL 319
>Q29RI9:MAT2B_BOVIN Methionine adenosyltransferase 2 subunit beta - Bos taurus (Bovine)| Length = 334 Score = 80.9 bits (198), Expect = 7e-15 Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P AA NV +S L + + G LI++S+D V++G Y+E D P+N+Y Sbjct: 103 ENHPDAASQLNVDASGNLAKEAAAIG---AFLIYISSDYVFDGTNPPYREEDIPNPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ EK V + A+LR ++YG V +E+S D V + + + + Sbjct: 160 GKTKLEGEKAVLENNLGAAVLRIPVLYG--EVERLEESAVTIMFDKVQFSNKSANMDHWQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L + + D I+ + G +++++ +MA ++A+ S + Sbjct: 218 QRFPTHVKDVATVCRQLAEKRMLD-PSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + S V G P + +D ++L +TLGI T F G++ +L Sbjct: 277 RPITDSPV-VGAQRPRNAQLDCSRL-ETLGIGQRTPFRIGIKESL 319
>Q5BJJ6:MAT2B_DANRE Methionine adenosyltransferase 2 subunit beta - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 323 Score = 74.7 bits (182), Expect = 5e-13 Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 1/196 (0%) Frame = +3 Query: 87 TLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGP 266 + LI++STD V++G Y E D P+N+YGKSK+ E+ + C A+LR I++G Sbjct: 116 SFLIYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFG- 174 Query: 267 QTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKIR 446 V VE+S + V + + + R P Y D+ V ++ + L D + +R Sbjct: 175 -EVEKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERALQD-QSLR 232 Query: 447 VLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQT- 623 + + +++++ +M ++A+ S + + G P + ++ ++L Sbjct: 233 GIFHYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLG 292 Query: 624 LGIKPITFLDGVRATL 671 L ++ F + +R +L Sbjct: 293 LSVESTPFKNAIRDSL 308
>Q566L8:MAT2B_XENTR Methionine adenosyltransferase 2 subunit beta - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 334 Score = 74.3 bits (181), Expect = 7e-13 Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 1/194 (0%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQT 272 LI++S+D V++G Y+E P+N+YGK+K+ E+ V A+LR ++YG Sbjct: 131 LIYVSSDYVFDGTSPPYREDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--D 188 Query: 273 VSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKIRVL 452 V + +S D V + + + + R P YVKD+ V L LT+ L D I+ + Sbjct: 189 VEKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRLQD-PSIKGI 247 Query: 453 LNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGI 632 + G +++++ +M ++A+ S ++ + V P + +D +KL + +GI Sbjct: 248 YHWSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKL-EKIGI 305 Query: 633 KPIT-FLDGVRATL 671 T F G+R +L Sbjct: 306 GQRTPFRVGIRESL 319
>Q4QQZ4:MAT2B_XENLA Methionine adenosyltransferase 2 subunit beta - Xenopus laevis| (African clawed frog) Length = 334 Score = 72.8 bits (177), Expect = 2e-12 Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 3/225 (1%) Frame = +3 Query: 6 EMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E P A NV +S L + G LI++S+D V++G Y+E P+N+Y Sbjct: 103 ESQPELASLLNVVASENLAKVAAGVG---AFLIYVSSDYVFDGTSPPYREDSIPHPLNLY 159 Query: 180 GKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE 359 GK+K+ E+ V A+LR ++YG V + +S D V + + + + Sbjct: 160 GKTKLDGERAVLQNNEGAAVLRVPVMYG--DVEKLSESAVTILFDKVQFSNKSANLDHCQ 217 Query: 360 YRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSII 539 R P +VKD+ V L LT+ + D I+ + + G +++++ ++A ++A+ S + Sbjct: 218 QRFPTHVKDVATVCLQLTERKIQD-PSIKGIYHWSGNEQMTKYEIACAMADAFNLPSSHL 276 Query: 540 KSVPASSVNRGVASPPDISMDITKLTQTLGIKPIT-FLDGVRATL 671 + + V P + +D +KL + +GI T F G+R TL Sbjct: 277 RPITDEPVG-ATPRPWNPQLDCSKL-EKMGIGQRTPFRVGIRETL 319
>P55463:RFBD_RHISN Probable dTDP-4-dehydrorhamnose reductase - Rhizobium sp. (strain| NGR234) Length = 296 Score = 65.9 bits (159), Expect = 2e-10 Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 6/187 (3%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQ 269 +IHLSTD V++G K Y E D T P+++YG+SK+ E V N+ ILR+S +Y Sbjct: 95 VIHLSTDYVFDGAKPVPYCEEDRTGPISVYGRSKLEGEFAVASANPNHTILRTSWVYSRY 154 Query: 270 TVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGK-KIR 446 + V+K L + +++ D+ CP DI ++++ + LS +R Sbjct: 155 GQNFVKKML------RLADTNDELNVVADQLGCPTSADDISVAVMTIARRMLSSSSADLR 208 Query: 447 VLLNVGGADRVSRLQMAESV----AEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKL 614 + ++ G+ S A+ V E+ G + + + A+ P + + KL Sbjct: 209 GIFHLSGSGEASWAAFAKYVFSVYDEITG-RQIKVHDISAAEYPTPARRPANSRLHCDKL 267 Query: 615 TQTLGIK 635 +T GI+ Sbjct: 268 ERTFGIR 274
>P26392:RFBD_SALTY dTDP-4-dehydrorhamnose reductase - Salmonella typhimurium| Length = 299 Score = 56.2 bits (134), Expect = 2e-07 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQ 269 ++H STD V+ G ++E D T P+N+YGK+K+A EK + D C + I R+S +Y + Sbjct: 99 VVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGK 158 Query: 270 TVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVD 395 + + L + + Q + ND+Y P + + D Sbjct: 159 GNNFAKTML------RLAKERQTLSVINDQYGAPTGAELLAD 194
>P39631:SPSK_BACSU Spore coat polysaccharide biosynthesis protein spsK - Bacillus| subtilis Length = 283 Score = 51.6 bits (122), Expect = 5e-06 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 1/193 (0%) Frame = +3 Query: 96 IHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQT 272 +H+STD V+ G + Y+E D P +YGKSK E+ + + I+R+S +YG Sbjct: 98 VHISTDYVFNGKGTQPYREDDPLDPKTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGG 157 Query: 273 VSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKIRVL 452 + VE L + Q++ +D+ P Y KD+ + ++ L + Sbjct: 158 SNFVETML------KLAETKQELRVVSDQIGSPTYTKDLAEAVIKLFSHPPG-------I 204 Query: 453 LNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGI 632 +V + S + A ++ E G +I+ N+ P S+ + + GI Sbjct: 205 YHVSNSGICSWYEFATAIMEESGLETAILSVTTEEYGNK--TPRPAYSVLSHRAIEEAGI 262 Query: 633 KPITFLDGVRATL 671 +P + + +R L Sbjct: 263 RPPHWREALREYL 275
>P37760:RFBD1_ECOLI dTDP-4-dehydrorhamnose reductase - Escherichia coli| Length = 299 Score = 49.3 bits (116), Expect = 2e-05 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQ 269 +IH STD V+ G + E D T P+N+YG++K+A EK + + C+ + I R+S +Y + Sbjct: 99 VIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGK 158 Query: 270 TVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVD 395 + + L + + +++ ND++ P + + D Sbjct: 159 GNNFAKTML------RLAKEREELAVINDQFGAPTGAELLAD 194
>P37778:RFBD_SHIFL dTDP-4-dehydrorhamnose reductase - Shigella flexneri| Length = 299 Score = 48.9 bits (115), Expect = 3e-05 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQ 269 +IH STD V+ G + E D T P+N+YG++K+A EK + + C+ + I R+S +Y + Sbjct: 99 VIHYSTDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGK 158 Query: 270 TVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVD 395 + + L + + +++ ND++ P + + D Sbjct: 159 GNNFAKTML------RLAKEREELAVINDQFGAPTGAELLAD 194
>O95455:TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase - Homo sapiens (Human)| Length = 350 Score = 46.6 bits (109), Expect = 1e-04 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 9/149 (6%) Frame = +3 Query: 96 IHLSTDQVYEGVKSFYKEGDETLP---VNMYGKSKVAAEKFVTDKCSNY----AILRSSI 254 I++STD+VY G S KE DE+ P N Y SK AAE FV Y I RSS Sbjct: 138 IYVSTDEVYGG--SLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSN 195 Query: 255 IYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFND--EYRCPVYVKDIVDVILSLTKSWLS 428 +YGP EK +P ++L ++ + R +Y D+V+ L++ K Sbjct: 196 VYGPHQYP--EKVIP--KFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKK--- 248 Query: 429 DGKKIRVLLNVGGADRVSRLQMAESVAEV 515 K + N+G +S +Q+A+ + ++ Sbjct: 249 --GKPGEIYNIGTNFEMSVVQLAKELIQL 275
>Q46769:RFBD2_ECOLI dTDP-4-dehydrorhamnose reductase - Escherichia coli| Length = 301 Score = 43.9 bits (102), Expect = 0.001 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSFYKEG--DETLPVNMYGKSKVAAEKFVTDK-CSNYAILRSSIIY 260 +IH STD V+ G +G D T P+N+YG++K+++EK K C + I R+S +Y Sbjct: 99 VIHYSTDYVFPGTGEIPWQGGTDATAPLNVYGETKLSSEKKALQKHCGKHIIFRTSWVY 157
>Q59083:EXOB_AZOBR UDP-glucose 4-epimerase - Azospirillum brasilense| Length = 348 Score = 43.9 bits (102), Expect = 0.001 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 22/233 (9%) Frame = +3 Query: 48 SLVDWSLSFGNDKTLLIHLSTDQVYEGVKSF-YKEGDETLPVNMYGKSKVAAEKFVTDKC 224 +L+ L G DK ++ ST VY +S +E T+P+N YG SK+ E+ + D Sbjct: 107 TLLGACLRAGIDK--VVFSSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQMLRDAG 164 Query: 225 SNY----AILRSSIIYGPQTVSPVEKSLPIQW------MDNVLSQGQQVDFFNDEYRCP- 371 + + ILR + G ++ P+ +L + + F +Y P Sbjct: 165 AAHGLRSVILRYFNVAGADPAGRTGQATPVATHLIKVACQALLGRRPPLAIFGTDYDTPD 224 Query: 372 -------VYVKDIVDV-ILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYS 527 ++V D+ D +L+L G +L+N G S ++ ++ EV G Sbjct: 225 GTCIRDYIHVSDLADAHVLALLHLRRGGGS---LLMNCGYGRGASVREVVRTLEEVSG-- 279 Query: 528 KSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKP-ITFLDG-VRATLDTE 680 + VPA+ +R PP + ++ + LG P LDG VR+ L E Sbjct: 280 ----EQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGIVRSALSWE 328
>Q8VDR7:TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase - Mus musculus (Mouse)| Length = 355 Score = 43.1 bits (100), Expect = 0.002 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 10/165 (6%) Frame = +3 Query: 51 LVDWSLSFGNDKTLLIHLSTDQVYEG-VKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCS 227 LV+ + G +K I++STD+VY G + + E P N Y SK AAE FV Sbjct: 125 LVNAAYEAGVEK--FIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWE 182 Query: 228 NY----AILRSSIIYG----PQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVK 383 Y I RSS +YG P+ V P SL +Q G + + R +Y Sbjct: 183 RYKFPVVITRSSNVYGPHQYPERVIPKFISL-LQHNRKCCIHGSGL-----QRRNFLYAA 236 Query: 384 DIVDVILS-LTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEV 515 D+V+ L+ LTK + + N+G +S +Q+A+ + ++ Sbjct: 237 DVVEAFLTVLTKGEPGE------IYNIGTNFEMSVVQLAKELIQL 275
>Q7WTB1:GALE_LACHE UDP-glucose 4-epimerase - Lactobacillus helveticus| Length = 330 Score = 43.1 bits (100), Expect = 0.002 Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 18/176 (10%) Frame = +3 Query: 165 PVNMYGKSKVAAEKFV--TDKCS--NYAILRSSIIYGPQTVSPV------EKSLPIQWMD 314 P+N YG++K+ EK + DK Y LR + G + + E L + Sbjct: 137 PINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGASSDGSIGEDHAPETHLIPNILK 196 Query: 315 NVLSQGQQVDFFNDEY--------RCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGA 470 + +S + F D+Y R V V+D++D + K + K + N+G A Sbjct: 197 SAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHMMKTNKS--DVFNLGTA 254 Query: 471 DRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKP 638 S L++ ES +V G +P + R P + D TK LG KP Sbjct: 255 HGYSNLEILESAKKVTGI------DIPYTMGPRRGGDPDSLVADSTKARTVLGWKP 304
>P29781:STRL_STRGR dTDP-4-dehydrorhamnose reductase - Streptomyces griseus| Length = 304 Score = 40.8 bits (94), Expect = 0.008 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%) Frame = +3 Query: 6 EMDPAAAMATNV--PSSLVDWSLSFGNDKTLLIHLSTDQVYEGVKSF-YKEGDETLPVNM 176 E +PA AMA N P L + G +L+ LSTD V+ G Y+E T P + Sbjct: 74 ESEPALAMAVNGEGPRHLAQACRAVG---AVLLQLSTDYVFPGSGGRPYREDHPTGPRTV 130 Query: 177 YGKSKVAAEKFVTDKCSNYA-ILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFN 353 YG +K A E+ V + + I+R++ +YG + V K + ++ + V + Sbjct: 131 YGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLE------ADEDTVLVVD 184 Query: 354 DEYRCPVYVKDIVDVILSL 410 D++ P + D+ D + +L Sbjct: 185 DQHGQPTWTADLADRLAAL 203
>P96995:GALE_STRMU UDP-glucose 4-epimerase - Streptococcus mutans| Length = 333 Score = 40.8 bits (94), Expect = 0.008 Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 22/187 (11%) Frame = +3 Query: 144 KEGDETLPVNMYGKSKVAAE------------KFVTDKCSNYAILRSSIIYGPQTVSPVE 287 KE P+N YG+SK+ E KFV + N A + G + SP Sbjct: 132 KETTPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLRYFNVAGAKPDGSIG-EDHSPET 190 Query: 288 KSLPIQWMDNVLSQG--QQVDFFNDEYRCP--------VYVKDIVDVILSLTKSWLSDGK 437 LPI ++QG +++ F D+Y P V+ D+ D L L ++L G Sbjct: 191 HLLPIILQ---VAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHL-LALNYLRQGN 246 Query: 438 KIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLT 617 N+G + S LQ+ E+ +V G + +PA R P + K Sbjct: 247 P-STAFNLGSSTGFSNLQILEAARKVTG------QKIPAEKAARRSGDPDTLIASSEKAR 299 Query: 618 QTLGIKP 638 + LG KP Sbjct: 300 EVLGWKP 306
>P27830:RFFG_ECOLI dTDP-glucose 4,6-dehydratase - Escherichia coli| Length = 355 Score = 40.4 bits (93), Expect = 0.010 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 31/250 (12%) Frame = +3 Query: 15 PAAAMATNVPSS--LVDWSLSFGNDKT-------LLIHLSTDQVYEGVKS---FYKEGDE 158 PAA + TN+ + L++ + ++ N T H+STD+VY + S F+ E Sbjct: 94 PAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTP 153 Query: 159 TLPVNMYGKSKVAAEKFVTDKCSNYA----ILRSSIIYGPQTVSPVEKSLPIQWMDNVLS 326 P + Y SK +++ V Y I S YGP EK +P+ ++ + Sbjct: 154 YAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAG 211 Query: 327 QGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESV 506 + V + R +YV+D + + + K+ N+GG + L + E++ Sbjct: 212 KSLPVYGNGQQIRDWLYVEDHARALYCVATT-----GKVGETYNIGGHNERKNLDVVETI 266 Query: 507 AEVRGYSKSIIKSVPASSVNRGVASPPDI--------------SMDITKLTQTLGIKP-I 641 E + A + GVA D+ ++D +K+ + LG P Sbjct: 267 CE--------LLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQE 318 Query: 642 TFLDGVRATL 671 TF G+R T+ Sbjct: 319 TFESGMRKTV 328
>Q9SA52:Y1934_ARATH Protein At1g09340, chloroplast precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 378 Score = 40.0 bits (92), Expect = 0.014 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Frame = +3 Query: 183 KSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEY 362 K K+ E + K N+ +R IYGP +PVE +W + L G+ + N Sbjct: 188 KGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPVPNSGI 242 Query: 363 RCPV--YVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGY 524 + +VKD+ L++ L + K R + N+ G V+ +A++ A+ G+ Sbjct: 243 QISQLGHVKDLATAFLNV----LGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294
>P39630:SPSJ_BACSU Spore coat polysaccharide biosynthesis protein spsJ - Bacillus| subtilis Length = 315 Score = 40.0 bits (92), Expect = 0.014 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 11/204 (5%) Frame = +3 Query: 93 LIHLSTDQVYEGVKSFYKEGDETLPV---NMYGKSKVAAEKFVTDKCSNY----AILRSS 251 LIH+STD+VY +K+ ET P+ N Y SK +++ V + I R S Sbjct: 120 LIHISTDEVYGDLKADDPAFTETTPLSPNNPYSASKASSDLLVLSYVKTHKLPAIITRCS 179 Query: 252 IIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFND--EYRCPVYVKDIVDVI-LSLTKSW 422 YGP S EK +P + QG V + D + R ++ +D I L L K Sbjct: 180 NNYGPYQHS--EKMIPT--IIRHAKQGLPVPLYGDGLQIRDWLFAEDHCRAIKLILEKG- 234 Query: 423 LSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMD 602 +DG+ + N+GG + + ++A + + G + +R A ++ Sbjct: 235 -TDGE----VYNIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYA------IN 283 Query: 603 ITKLTQTLGIK-PITFLDGVRATL 671 +KL LG + +TF +G+ T+ Sbjct: 284 ASKLKNELGWRQEVTFEEGIARTI 307
>Q5P2S1:HLDD_AZOSE ADP-L-glycero-D-manno-heptose-6-epimerase - Azoarcus sp. (strain| EbN1) (Aromatoleum aromaticum (strain EbN1)) Length = 319 Score = 39.3 bits (90), Expect = 0.023 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 14/167 (8%) Frame = +3 Query: 6 EMDPAAAMATNVP--SSLVDWSLSFGNDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMY 179 E D MA N SL+ W+++ K L++ S+ VY +F + + P+NMY Sbjct: 83 EWDGRFVMAVNYEYTKSLLGWAVA---RKVPLLYASSASVYGMGPTFRESREFEHPLNMY 139 Query: 180 GKSKVAAE----KFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDF 347 SK + +F S LR +YGP+ + N L+ ++ Sbjct: 140 AYSKFLFDCHLRRFAPGIDSQVVGLRYFNVYGPREQHKGSMASVAYHFHNQLNDSGRLRL 199 Query: 348 F--------NDEYRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVG 464 F ++ R ++V D+V V L WL D +R + NVG Sbjct: 200 FEGADGYGPGEQQRDFIHVDDVVAVNL-----WLLDNPGVRGIFNVG 241
>Q3A8K5:HLDD_PELCD ADP-L-glycero-D-manno-heptose-6-epimerase - Pelobacter carbinolicus| (strain DSM 2380 / Gra Bd 1) Length = 315 Score = 38.5 bits (88), Expect = 0.040 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 12/135 (8%) Frame = +3 Query: 96 IHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSIIYG 263 ++ S+ Y G + F +E P+N+YG SK +++V S A R +YG Sbjct: 113 LYASSAATYGGGQVFCEEPQYERPLNVYGYSKALFDQYVRRVLPTADSQVAGFRYFNVYG 172 Query: 264 PQTVSPVEKSLPIQWMDNVLSQGQQVDFF--------NDEYRCPVYVKDIVDVILSLTKS 419 P+ + + N L + V+ F ++ R +YV D+VDV L Sbjct: 173 PREQHKGSMASVAFHLRNQLLKDGSVNLFEGCDGYGDGEQRRDFIYVGDVVDVNL----- 227 Query: 420 WLSDGKKIRVLLNVG 464 W D ++ + NVG Sbjct: 228 WFLDHPEVSGIYNVG 242
>P21977:GALE_STRTR UDP-glucose 4-epimerase - Streptococcus thermophilus| Length = 332 Score = 38.5 bits (88), Expect = 0.040 Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 20/178 (11%) Frame = +3 Query: 165 PVNMYGKSKVAAEKFVTDKCSNYAI----LRSSIIYGPQTVSPVEKS------LPIQWMD 314 P+N YG+SK+ E + Y I LR + G + + ++ LPI Sbjct: 139 PINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGANLMVRLVRTRSETHLLPIILQ- 197 Query: 315 NVLSQG--QQVDFFNDEYRCP--------VYVKDIVDVILSLTKSWLSDGKKIRVLLNVG 464 ++QG +++ F D+Y P V+ D+ D L L +L G + N+G Sbjct: 198 --VAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHL-LAVEYLRKGNE-STAFNLG 253 Query: 465 GADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKP 638 + S LQ+ E+ +V G K +PA +R P + K LG KP Sbjct: 254 SSTGFSNLQILEAARKVTG------KEIPAEKADRRPGDPDILIASSEKARTVLGWKP 305
>Q31FG4:HLDD_THICR ADP-L-glycero-D-manno-heptose-6-epimerase - Thiomicrospira| crunogena (strain XCL-2) Length = 323 Score = 38.1 bits (87), Expect = 0.052 Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 13/211 (6%) Frame = +3 Query: 78 NDKTLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKC----SNYAILR 245 N K ++ S+ VY +F +E P+N+YG SK +++V S A R Sbjct: 106 NRKIPFLYASSAAVYGDGPTFIEERQYEKPLNVYGYSKFQFDQYVRRILPLAESQVAGFR 165 Query: 246 SSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFN--DEY------RCPVYVKDIVDVI 401 +YGP+ + + + N + G+++ F D Y R V+++D+V+V Sbjct: 166 YFNVYGPREQHKGDMASVAFKLHNQVLAGEKLKLFGAYDGYEAGMQTRDFVFIEDVVNVN 225 Query: 402 LSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVAS 581 L W + + + N+G A +A++V + G + I+ +P +G A Sbjct: 226 L-----WFMENPEQSGIFNLGPAAAEPFKHIADAVIDFHGQGE--IEYIPFPDRLKG-AY 277 Query: 582 PPDISMDITKLTQTLGIKPI-TFLDGVRATL 671 D T+L KP T +GV+ L Sbjct: 278 QSFTQADNTRLRDAGYDKPFHTVSEGVQKYL 308
>Q9KDV3:GALE_BACHD UDP-glucose 4-epimerase - Bacillus halodurans| Length = 334 Score = 38.1 bits (87), Expect = 0.052 Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 21/208 (10%) Frame = +3 Query: 78 NDKTLLIHLSTDQVY-EGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCS-----NYAI 239 +D ++ ST Y E V+ +E D T+P N YG++K+A EK + C Y Sbjct: 106 HDVKKIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIEK-MFHWCQEAYGLQYVC 164 Query: 240 LRSSIIYGP-------QTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEY--------RCPV 374 LR G + SP +PI + L Q ++V F D+Y R + Sbjct: 165 LRYFNAAGADPNGRIGEDHSPESHLIPIV-LQVALGQRERVAIFGDDYQTEDGSCIRDYI 223 Query: 375 YVKDIVDVILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPA 554 +V D+ + + DG+ N+G S ++ E +V G+ +PA Sbjct: 224 HVMDLANAHYLACEHLRKDGQS--GSFNLGNGKGFSVKEVIEVCRQVTGH------PIPA 275 Query: 555 SSVNRGVASPPDISMDITKLTQTLGIKP 638 R P + K LG +P Sbjct: 276 EIAPRRSGDPASLIASSEKAQTILGWEP 303
>Q57664:GALE_METJA Putative UDP-glucose 4-epimerase - Methanococcus jannaschii| Length = 305 Score = 36.6 bits (83), Expect = 0.15 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 12/190 (6%) Frame = +3 Query: 141 YKEGDETLPVNM---YGKSKVAAEKFVTDKCSN------YAILRSSIIYGPQTVSPVEKS 293 Y DE P+N YG SK E+++ K N YAILR S +YG + E Sbjct: 125 YLPVDENHPINPLSPYGLSKYVGEEYI--KLYNRLYGIEYAILRYSNVYGERQDPKGEAG 182 Query: 294 LPIQWMDNVLSQGQQVDFFN-DEYRCPVYVKDIVDVILSLTKSWLSDGKKIRVLLNVGGA 470 + ++D +L + F + ++ R VYV D+ L + +W ++ ++N+G Sbjct: 183 VISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANL-MALNWKNE------IVNIGTG 235 Query: 471 DRVSRLQMAESVAEVRGYSKSIIKSVP-ASSVNRGVASPPDISMDITKLTQTLGIKP-IT 644 S ++ + + G+ I P V R I +DI K ++LG KP I Sbjct: 236 KETSVNELFDIIKHEIGFRGEAIYDKPREGEVYR-------IYLDIKK-AESLGWKPEID 287 Query: 645 FLDGVRATLD 674 +G++ ++ Sbjct: 288 LKEGIKRVVN 297
>Q9CL97:HLDD_PASMU ADP-L-glycero-D-manno-heptose-6-epimerase - Pasteurella multocida| Length = 310 Score = 35.8 bits (81), Expect = 0.26 Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 7/158 (4%) Frame = +3 Query: 99 HLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSIIYGP 266 + S+ Y F +E + P+N+YG SK +++V + S R +YGP Sbjct: 113 YASSAATYGDKTEFREEREFEAPLNVYGYSKFLFDQYVRAILPEANSPVCGFRYFNVYGP 172 Query: 267 QTVSPVEKSLPIQWMDNVLSQGQQVDFF--NDEYRCP-VYVKDIVDVILSLTKSWLSDGK 437 + + ++N + +G++ F ++ +R VYV D+ V + ++ +S Sbjct: 173 RENHKGAMASVAFHLNNQILKGEKPKLFAGSEHFRRDFVYVGDVAAVNIWCWQNNISG-- 230 Query: 438 KIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVP 551 + N+G + S L++A++V + G +++ I+ +P Sbjct: 231 ----IYNLGTGNAESFLEVAKAVVKFHGKTEADIEIIP 264
>Q1R1N5:HLDD_CHRSD ADP-L-glycero-D-manno-heptose-6-epimerase - Chromohalobacter| salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) Length = 318 Score = 35.8 bits (81), Expect = 0.26 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Frame = +3 Query: 96 IHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAI----LRSSIIYG 263 ++ S+ Y G + F + + P+N+YG SK+ +++V ++ R +YG Sbjct: 117 LYASSAATYGGSEVFVEAPEHEKPLNVYGYSKLLFDQYVRVHWESFDAQVVGFRYFNVYG 176 Query: 264 PQTVSPVEKSLPIQWMDNVLSQGQQVDFFN--DEY------RCPVYVKDIVDVILSLTKS 419 P+ + + + + +G+ F D Y R VYV D+VDV L Sbjct: 177 PREQHKGKMASVAYHHHSQVKRGENPKLFGAWDGYEAGMQSRDFVYVGDVVDVNL----- 231 Query: 420 WLSDGKKIRVLLNVGGADRVSRLQMAESVAE 512 W D ++ + N+G +AE+V + Sbjct: 232 WCLDHPEVSGIFNLGTGRAEPFKAIAETVID 262
>Q9LH76:RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 664 Score = 35.0 bits (79), Expect = 0.44 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Frame = +3 Query: 96 IHLSTDQVY----EGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAI----LRSS 251 IH+STD+VY E E + LP N Y +K AE V +Y + R + Sbjct: 128 IHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187 Query: 252 IIYGPQTVSPVEKSLP 299 +YGP EK +P Sbjct: 188 NVYGPNQFP--EKLIP 201
>Q9LPG6:RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 667 Score = 35.0 bits (79), Expect = 0.44 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Frame = +3 Query: 96 IHLSTDQVY----EGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAI----LRSS 251 IH+STD+VY E E + LP N Y +K AE V +Y + R + Sbjct: 130 IHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 189 Query: 252 IIYGPQTVSPVEKSLP 299 +YGP EK +P Sbjct: 190 NVYGPNQFP--EKMIP 203
>Q45291:GALE_CORGL UDP-glucose 4-epimerase - Corynebacterium glutamicum| (Brevibacterium flavum) Length = 329 Score = 35.0 bits (79), Expect = 0.44 Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 15/175 (8%) Frame = +3 Query: 159 TLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVS--------PVEKSLPIQWMD 314 T P N YG +K++ + +T + + + +S+ Y + VE L + Sbjct: 133 TQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQ 192 Query: 315 NVLSQGQQVDFFNDEYRCP--VYVKDIVDVILSLTKSWL-----SDGKKIRVLLNVGGAD 473 ++ F D++ P V+D + IL L K+ + ++ K R+ N+G D Sbjct: 193 VATGHREKTFMFGDDWPTPDGTAVRDYIH-ILDLAKAHVLALESNEAGKHRI-FNLGSGD 250 Query: 474 RVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKP 638 S Q+ E EV G+ +PA R P + K Q LG P Sbjct: 251 GYSVKQVVEMCREVTGH------PIPAEVAPRRAGDPATLIASSEKAKQELGWTP 299
>Q9SYM5:RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 669 Score = 34.3 bits (77), Expect = 0.75 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Frame = +3 Query: 96 IHLSTDQVY----EGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAI----LRSS 251 IH+STD+VY E E + LP N Y +K AE V +Y + R + Sbjct: 128 IHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187 Query: 252 IIYGPQTVSPVEKSLP 299 +YGP EK +P Sbjct: 188 NVYGPNQFP--EKLIP 201
>P33119:GALE_CORDI UDP-glucose 4-epimerase - Corynebacterium diphtheriae| Length = 328 Score = 34.3 bits (77), Expect = 0.75 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 16/180 (8%) Frame = +3 Query: 147 EGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIY----GPQTV----SPVEKSLPI 302 E T P N YG +K++ + +T Y +S+ Y G + +E L Sbjct: 129 EDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGAYGLVGENREIETHLIP 188 Query: 303 QWMDNVLSQGQQVDFFNDEY--------RCPVYVKDIVDVILSLTKSWLSDGKKIRVLLN 458 + L ++ F D++ R ++++D+ D + +S + +I N Sbjct: 189 LVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQSNVEGSHRI---FN 245 Query: 459 VGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKP 638 +G + S Q+ ++ EV G+ +PA R P + K LG KP Sbjct: 246 LGSGEGYSVKQVIDTCREVTGH------LIPAEVAPRRAGDPAVLIASSAKAQSELGWKP 299
>P55462:RFBB_RHISN Probable dTDP-glucose 4,6-dehydratase - Rhizobium sp. (strain| NGR234) Length = 350 Score = 33.5 bits (75), Expect = 1.3 Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 19/224 (8%) Frame = +3 Query: 60 WSLSFGNDKTL--LIHLSTDQVYE--GVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCS 227 WS N K ++H+STD+VY G + ++E P + Y SK A++ F T Sbjct: 114 WSNLSQNRKAFFKMLHVSTDEVYGSLGDRGQFEEVSPYDPSSPYSASKAASDHFATAWQR 173 Query: 228 NY----AILRSSIIYGPQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVD 395 Y I S YGP EK +P+ ++ + + V R +YV D Sbjct: 174 TYGLPVVISNCSNNYGPFHFP--EKLIPLMILNALDRKPLPVYGTGSNIRDWLYVDDHAR 231 Query: 396 VILSLTKSWLSDGKKIRVLLNVGGADRVSRLQMAESV----------AEVRGYSKSIIKS 545 + + + K NVGG + + + + + A G + +K Sbjct: 232 ALWLIVREGRPGEK-----YNVGGRNELRNIDVVNRICLLLDELSPNASHYGDLITFVKD 286 Query: 546 VPASSVNRGVASPPDISMDITKLTQTLGIKPITFLD-GVRATLD 674 P ++D TKL LG K D G+R T++ Sbjct: 287 RPGHDAR--------YAIDATKLETELGWKAQENFDTGIRKTVE 322
>P13226:GALE_STRLI UDP-glucose 4-epimerase - Streptomyces lividans| Length = 329 Score = 33.5 bits (75), Expect = 1.3 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 15/141 (10%) Frame = +3 Query: 147 EGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIY--------GPQTVSPVEKSLPI 302 E T P N YG SK+A + +T + + + + S+ Y G + V E L Sbjct: 134 ESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGANRGVRLVHDPESHLIP 193 Query: 303 QWMDNVLSQGQQVDFFNDEYRCP-------VYVKDIVDVILSLTKSWLSDGKKIRVLLNV 461 + + + + + D+Y P ++V D+ + L + G + ++ N+ Sbjct: 194 LVLQVAQGRREAISVYGDDYPTPDTCVRDYIHVADLAEAHLLAVRR--RPGNE-HLICNL 250 Query: 462 GGADRVSRLQMAESVAEVRGY 524 G + S ++ E+V V G+ Sbjct: 251 GNGNGFSVREVVETVRRVTGH 271
>Q9SW08:WBC4_ARATH White-brown complex homolog protein 4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 577 Score = 33.1 bits (74), Expect = 1.7 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -3 Query: 553 AGTDLIIDLLYPRTSATDSAICSLETLSAPPTFRSTRIFLPSDNQLFVKDNITSTISFT 377 AG ++D+L RTS T +I L P ++R ++P + F ++ T +F+ Sbjct: 52 AGKSTLLDILAARTSPTSGSILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFS 110
>P45048:HLDD_HAEIN ADP-L-glycero-D-manno-heptose-6-epimerase - Haemophilus influenzae| Length = 308 Score = 33.1 bits (74), Expect = 1.7 Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 8/195 (4%) Frame = +3 Query: 99 HLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSIIYGP 266 + S+ Y K F +E + P+N+YG SK +++V + S R +YGP Sbjct: 113 YASSAATYGDTKVFREEREFEGPLNVYGYSKFLFDQYVRNILPEAKSPVCGFRYFNVYGP 172 Query: 267 QTVSPVEKSLPIQWMDNVLSQGQQVDFF--NDEYRCP-VYVKDIVDVILSLTKSWLSDGK 437 + + ++N + +G+ F ++ +R VYV D+ V + ++ +S Sbjct: 173 RENHKGSMASVAFHLNNQILKGENPKLFAGSEHFRRDFVYVGDVAAVNIWCWQNGISG-- 230 Query: 438 KIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLT 617 + N+G + S +A++V + G K I+++P + D+TKL Sbjct: 231 ----IYNLGTGNAESFRAVADAVVKFHG--KGEIETIPFPEHLKS-RYQEYTQADLTKLR 283 Query: 618 QTLGIKPI-TFLDGV 659 T KP T +GV Sbjct: 284 STGYDKPFKTVAEGV 298
>Q4QLI0:HLDD_HAEI8 ADP-L-glycero-D-manno-heptose-6-epimerase - Haemophilus influenzae| (strain 86-028NP) Length = 308 Score = 32.3 bits (72), Expect = 2.8 Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 8/195 (4%) Frame = +3 Query: 99 HLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSIIYGP 266 + S+ Y K F +E + P+N+YG SK +++V + S R +YGP Sbjct: 113 YASSAATYGDTKVFREEREFEGPLNVYGYSKFLFDQYVRNILPEAKSPVCGFRYFNVYGP 172 Query: 267 QTVSPVEKSLPIQWMDNVLSQGQQVDFF--NDEYRCP-VYVKDIVDVILSLTKSWLSDGK 437 + + ++N + +G+ F ++ +R VYV D+ V + ++ +S Sbjct: 173 RENHKGSMASVAFHLNNQILKGENPKLFAGSEGFRRDFVYVGDVAAVNIWCWQNGISG-- 230 Query: 438 KIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLT 617 + N+G + S +A++V + G K I+++P + D+TKL Sbjct: 231 ----IYNLGTGNAESFRAVADAVVKFHG--KGEIETIPFPEHLKS-RYQEYTQADLTKLR 283 Query: 618 QTLGIKPI-TFLDGV 659 T KP T +GV Sbjct: 284 STGYDKPFKTVAEGV 298
>Q65WA7:HLDD_MANSM ADP-L-glycero-D-manno-heptose-6-epimerase - Mannheimia| succiniciproducens (strain MBEL55E) Length = 308 Score = 31.6 bits (70), Expect = 4.9 Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 7/158 (4%) Frame = +3 Query: 99 HLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSIIYGP 266 + S+ Y F +E + P+N YG SK +++V + S + +YGP Sbjct: 113 YASSAATYGDKTDFIEEREFEGPLNAYGYSKFLFDQYVRAILPEANSPVCGFKYFNVYGP 172 Query: 267 QTVSPVEKSLPIQWMDNVLSQGQQVDFFNDE---YRCPVYVKDIVDVILSLTKSWLSDGK 437 + + ++N + +G+ F R VYV D+ +V L ++ +S Sbjct: 173 REQHKGSMASVAFHLNNQILKGENPKLFAGSEHFLRDFVYVGDVAEVNLWAWENGVSG-- 230 Query: 438 KIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVP 551 + N+G + S +AE+V + G K I+++P Sbjct: 231 ----IFNLGTGNAESFKAVAEAVVKFHG--KGEIETIP 262
>Q39IF3:HLDD_BURS3 ADP-L-glycero-D-manno-heptose-6-epimerase - Burkholderia sp.| (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) Length = 330 Score = 31.6 bits (70), Expect = 4.9 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = +3 Query: 87 TLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV-----TDKCSNYAILRSS 251 T ++ S+ +Y G F +E D P+N+YG SK ++ + T K S A R Sbjct: 109 TQFLYASSAAIYGGSTRFVEERDVEAPLNVYGYSKFLFDQVIRRVLPTAK-SQIAGFRYF 167 Query: 252 IIYGPQ 269 +YGP+ Sbjct: 168 NVYGPR 173
>Q1BY20:HLDD_BURCA ADP-L-glycero-D-manno-heptose-6-epimerase - Burkholderia| cenocepacia (strain AU 1054) Length = 330 Score = 31.6 bits (70), Expect = 4.9 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +3 Query: 87 TLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFV----TDKCSNYAILRSSI 254 T ++ S+ +Y G F +E D P+N+YG SK ++ + S A R Sbjct: 109 TQFLYASSAAIYGGSTRFVEERDVEAPLNVYGYSKFLFDQVIRRVLPSAKSQIAGFRYFN 168 Query: 255 IYGPQ 269 +YGP+ Sbjct: 169 VYGPR 173
>P18645:GALE_RAT UDP-glucose 4-epimerase - Rattus norvegicus (Rat)| Length = 347 Score = 31.2 bits (69), Expect = 6.3 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 19/150 (12%) Frame = +3 Query: 177 YGKSKVAAEKFVTDKCS-----NYAILRSSIIYGPQTVSPV---EKSLPIQWMDNV---- 320 YGKSK E+ + D C N +LR I G + + + +P M V Sbjct: 156 YGKSKFFIEEMIQDLCRADTAWNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVA 215 Query: 321 LSQGQQVDFFNDEYRCP--VYVKDIVDVILSLTKSWLSDGKKIRV-----LLNVGGADRV 479 + + + ++ F D+Y V+D + V+ L K ++ KK++ + N+G Sbjct: 216 IGRREALNVFGDDYATEDGTGVRDYIHVV-DLAKGHIAALKKLKEQCGCRIYNLGTGTGY 274 Query: 480 SRLQMAESVAEVRGYSKSIIKSVPASSVNR 569 S LQM +++ + G K +P V R Sbjct: 275 SVLQMVQAMEKASG------KKIPYKVVAR 298
>P43713:FABG_HAEIN 3-oxoacyl-[acyl-carrier-protein] reductase - Haemophilus influenzae| Length = 242 Score = 31.2 bits (69), Expect = 6.3 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +3 Query: 432 GKKIRVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITK 611 G+ I + VG + + A V G+SKS+ K V A + V +P I+ D+T+ Sbjct: 129 GRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTE 188 Query: 612 L 614 + Sbjct: 189 V 189
>O31020:Y3137_VIBCH Uncharacterized protein VC_A0337 - Vibrio cholerae| Length = 334 Score = 30.8 bits (68), Expect = 8.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 152 PLFVEGFHPFINLICGEMNQKGLVIPEA 69 PL E FH FI+L+C E NQ +P + Sbjct: 144 PLVDETFHSFIDLLCSETNQYQYTMPSS 171 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 177,600,839 Number of extensions: 4111541 Number of successful extensions: 10198 Number of sequences better than 10.0: 47 Number of HSP's gapped: 10194 Number of HSP's successfully gapped: 47 Length of query: 314 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 201 Effective length of database: 69,691,104 Effective search space: 14007911904 Effective search space used: 14007911904 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
